BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016686
(384 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356513289|ref|XP_003525346.1| PREDICTED: uncharacterized protein LOC100814174 [Glycine max]
Length = 589
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/374 (63%), Positives = 297/374 (79%), Gaps = 3/374 (0%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
FP+L++LNLAWT VTKLP +S LE LN+SNCTIDSILE ++KAPLAK+ L+G F+NE
Sbjct: 209 FPKLTYLNLAWTSVTKLPKLSFLEYLNMSNCTIDSILE--DDKAPLAKLILSGAMFMNEA 266
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
EA LY T+ LSFLDV+NSS RF FL++MK +EHL+LSS M+GDDSVEMVAC G NL++
Sbjct: 267 EALLYANTNFLSFLDVANSSFHRFFFLSKMKVIEHLNLSSCMMGDDSVEMVACAGGNLKS 326
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
LNLS TR SSAG+GILAGH+P+LEILSLS T +DD AIS++SMMPSLK +D+SNT+IKGF
Sbjct: 327 LNLSGTRVSSAGLGILAGHVPHLEILSLSQTPVDDTAISFISMMPSLKDVDLSNTNIKGF 386
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+ Q + + +LSL ALQNL LERLNLE TQV D L+PLS+F+EL +LSL++ASL D+
Sbjct: 387 LHQGRTDVNSLLSLMALQNLK-LERLNLEHTQVRDEALYPLSSFQELRYLSLKSASLADI 445
Query: 242 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 301
SL+ LSS+ KLTNLSI DAVLTN GL FK P +LKLLDL G WLLTED IL FC+ HP+
Sbjct: 446 SLYYLSSIPKLTNLSICDAVLTNYGLDMFKAPETLKLLDLKGCWLLTEDTILSFCRNHPQ 505
Query: 302 IEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLE 361
+EV HEL + P +Q G N SPSR++ + + +K+D +P+S F+DQRLKYSR+ELL
Sbjct: 506 VEVRHELGTLFPVNQNGLNHSSPSRSTSKTMQMTKKKDQIPLSPYFVDQRLKYSRDELLA 565
Query: 362 LQYSSLSLARPDDS 375
LQ++SL LA +S
Sbjct: 566 LQFTSLPLASSSES 579
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 60 EREAFL--YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVG 116
E A+L Y L+ D S S +T M +L+ LDLS + D + + +
Sbjct: 79 EWMAYLGAYRHLRYLNLSDCHRVSTSALWPITGMSSLQELDLSRCFKVNDAGINHILSI- 137
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
NL L +S T ++ GV +LA L NL +L L G +DD A++ + ++ L +ID+ +
Sbjct: 138 PNLERLRISETSVTAKGVKLLAS-LKNLSLLDLGGLPVDDVALTSLQVLKRLHYIDLWGS 196
Query: 177 DI--KG--FIQQVGAETDLVL---SLTALQNLNHLERLNLEQTQV 214
I KG + T L L S+T L L+ LE LN+ +
Sbjct: 197 KISNKGASVLNTFPKLTYLNLAWTSVTKLPKLSFLEYLNMSNCTI 241
>gi|297742329|emb|CBI34478.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/380 (60%), Positives = 285/380 (75%), Gaps = 18/380 (4%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
+FP+LSFLN+AWT VT LP++ S+ CLN+SNCTI S+ EG KA L KI+++G TF+N
Sbjct: 213 VFPKLSFLNIAWTDVTTLPDLPSIACLNMSNCTIHSMFEGEGAKALLEKITVSGATFLNV 272
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
EAFL+IETS LSFLDVS SSL+ FCFL+ MKALEHLDLS +M+GDDS++++AC+GANLR
Sbjct: 273 SEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALEHLDLSFTMMGDDSIQLIACIGANLR 332
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
NLNLSNTR SSAGV ILAG +PNLE +SLS T +DD AISY+SMM S+K I++SNT++KG
Sbjct: 333 NLNLSNTRVSSAGVSILAGCVPNLETISLSHTPVDDVAISYISMMSSVKIINLSNTNVKG 392
Query: 181 FIQQVGAETDLV--LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
I ++++LV LSL AL +LN+++RL+LE TQV D L PL F++L LSL+ L
Sbjct: 393 LIW---SDSELVWELSLAALHSLNYVKRLDLEGTQVEDEALCPLLRFQQLNELSLKGTRL 449
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
TD+SL+QLSSL L NLSI D VLTN GL SFKPP +LKLLDL G WLLTEDAIL F K
Sbjct: 450 TDLSLYQLSSLPNLINLSIGDTVLTNGGLNSFKPPATLKLLDLRGCWLLTEDAILSFHKN 509
Query: 299 HPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHS------FLDQRL 352
P+IEV HEL I PS+Q SN SPS+ +KQ +P S S +DQR
Sbjct: 510 DPQIEVRHELVHITPSEQNASNRSSPSQKG-------KKQQKLPKSQSRSKEETVIDQRW 562
Query: 353 KYSREELLELQYSSLSLARP 372
KYSREELL +++S+L+L P
Sbjct: 563 KYSREELLAMEHSTLALNFP 582
>gi|225426352|ref|XP_002266070.1| PREDICTED: uncharacterized protein LOC100261612 [Vitis vinifera]
Length = 598
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/390 (58%), Positives = 286/390 (73%), Gaps = 28/390 (7%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
+FP+LSFLN+AWT VT LP++ S+ CLN+SNCTI S+ EG KA L KI+++G TF+N
Sbjct: 213 VFPKLSFLNIAWTDVTTLPDLPSIACLNMSNCTIHSMFEGEGAKALLEKITVSGATFLNV 272
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
EAFL+IETS LSFLDVS SSL+ FCFL+ MKALEHLDLS +M+GDDS++++AC+GANLR
Sbjct: 273 SEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALEHLDLSFTMMGDDSIQLIACIGANLR 332
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
NLNLSNTR SSAGV ILAG +PNLE +SLS T +DD AISY+SMM S+K I++SNT++KG
Sbjct: 333 NLNLSNTRVSSAGVSILAGCVPNLETISLSHTPVDDVAISYISMMSSVKIINLSNTNVKG 392
Query: 181 FIQQVGAETDLV--LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
I ++++LV LSL AL +LN+++RL+LE TQV D L PL F++L LSL+ L
Sbjct: 393 LIW---SDSELVWELSLAALHSLNYVKRLDLEGTQVEDEALCPLLRFQQLNELSLKGTRL 449
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
TD+SL+QLSSL L NLSI D VLTN GL SFKPP +LKLLDL G WLLTEDAIL F K
Sbjct: 450 TDLSLYQLSSLPNLINLSIGDTVLTNGGLNSFKPPATLKLLDLRGCWLLTEDAILSFHKN 509
Query: 299 HPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHS------------ 346
P+IEV HEL I PS+Q SN SPS+ +KQ +P S S
Sbjct: 510 DPQIEVRHELVHITPSEQNASNRSSPSQKG-------KKQQKLPKSQSRSKEETVIGMEF 562
Query: 347 -FLD---QRLKYSREELLELQYSSLSLARP 372
FL+ QR KYSREELL +++S+L+L P
Sbjct: 563 PFLESSYQRWKYSREELLAMEHSTLALNFP 592
>gi|255537779|ref|XP_002509956.1| protein binding protein, putative [Ricinus communis]
gi|223549855|gb|EEF51343.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/372 (61%), Positives = 279/372 (75%), Gaps = 6/372 (1%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN--KAPLAKISLAGTTFI 58
+FP+LSFLNL WT VT+LP++ SLE LNLSNCTI+S+LEG+ + KAPL K+ L+G TF
Sbjct: 208 LFPKLSFLNLGWTSVTRLPSMLSLEYLNLSNCTIESLLEGDGDGDKAPLTKVILSGATFP 267
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
NE EAF IE LSFLDVSNSSL F FL MK LEHLDLSS+M+GDD++E VAC+GAN
Sbjct: 268 NEAEAFYNIEPRFLSFLDVSNSSLQGFYFLHDMKMLEHLDLSSTMMGDDAIEAVACIGAN 327
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L NLNLS TR +SAG+ ILA H+P LE LSLS +DD+A+SY+ MM SLK +D+SNT+I
Sbjct: 328 LTNLNLSKTRVTSAGLAILAEHVPKLEYLSLSHALVDDFALSYIGMMSSLKVVDLSNTNI 387
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
KGFI+Q+G ET+L+ SL ALQ L+ L+ LNLE TQV DA + P+S+F+EL HLSL++ASL
Sbjct: 388 KGFIRQMGVETNLIPSLKALQGLSGLQSLNLEHTQVRDAAVAPVSSFQELSHLSLKSASL 447
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
D +L+ LSSLSKLT+L I DAVLTN GL F+PP +LK+LDL G WLLTE+AI FC
Sbjct: 448 ADETLYHLSSLSKLTSLVIGDAVLTNCGLDLFRPPVALKMLDLRGCWLLTEEAISSFCTK 507
Query: 299 HPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPM----PMSHSFLDQRLKY 354
HP I++ HEL + ++ S SPSR R V +KQ M PM F+DQRLKY
Sbjct: 508 HPAIKLRHELLNVSSPNESSSYRASPSRILSRPPHVSRKQGKMPVSWPMPQHFIDQRLKY 567
Query: 355 SREELLELQYSS 366
SREELL LQY S
Sbjct: 568 SREELLALQYQS 579
>gi|449464060|ref|XP_004149747.1| PREDICTED: uncharacterized protein LOC101203036 [Cucumis sativus]
gi|449505065|ref|XP_004162366.1| PREDICTED: uncharacterized protein LOC101225004 [Cucumis sativus]
Length = 586
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 206/384 (53%), Positives = 255/384 (66%), Gaps = 6/384 (1%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
MFP+LSFLN+AWT VTK PN+ LECLN+SNC IDS L+G K P K+ +G TF NE
Sbjct: 206 MFPKLSFLNIAWTSVTKFPNLPHLECLNMSNCIIDSTLKGLGAKVPPRKLIASGATFSNE 265
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E ++ L +LD SN+SL RFCFL++MKA+EHLDLSS+ IGD SVE++A VG NL+
Sbjct: 266 TEDLGFVAMDALYYLDFSNASLHRFCFLSRMKAVEHLDLSSTTIGDSSVELIASVGENLK 325
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNLS T SS+G+G LAG + NLE LSLS T +DD A+SYM+MMPSLK ID+S TDIKG
Sbjct: 326 YLNLSCTAVSSSGIGSLAGKVSNLETLSLSHTMVDDVALSYMNMMPSLKCIDLSETDIKG 385
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
+I ET V SLT LQNL+ LE LNLE T V D +L PLS F++L HL LR+ S TD
Sbjct: 386 YIHLSAPETVKVFSLTELQNLDCLEMLNLEHTHVDDESLRPLSRFRKLSHLMLRSPSFTD 445
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
L LS L L LSIRDAVLTN +FKP +L+ +DL G WLLTED + F + P
Sbjct: 446 TVLSYLSILPNLKTLSIRDAVLTNQAFDTFKPVATLQKIDLRGCWLLTEDGLSVFHRRFP 505
Query: 301 RIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELL 360
+I+V HEL S+ ++ PS + L Q M F+DQRLKYS+EELL
Sbjct: 506 QIDVRHELFHF-SSNPTSTDQPSTHFIPKKIQL-NQTSRSTGMPSYFVDQRLKYSKEELL 563
Query: 361 ELQYSSLSLARPDDSSTQDAMGLR 384
LQ+SSL P S++ MG +
Sbjct: 564 ALQFSSL----PHGSTSVPEMGRK 583
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 52/215 (24%)
Query: 93 ALEHLDLSSSMIGDDSV--EMVACVGA--NLRNLNLSNT-RFSSAGVGILAG-------- 139
+E +DLS G+++V E +A +G+ L++LN+SN R SS+GV ++G
Sbjct: 62 TIEVVDLS----GENAVDSEWMAYLGSFRYLQSLNVSNCHRLSSSGVWTISGMTTLRELN 117
Query: 140 -------------HL---PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
HL P LE L ++ T I + ++ +S + +L F+D+ +
Sbjct: 118 VSRCLKVTDAGIRHLLSIPTLEKLCIAETGITAHGVTLLSSLKTLVFLDLGGLPV----- 172
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
TD LS +LQ L L+ L+L +++S++ L F +L L++ S+T
Sbjct: 173 -----TDQALS--SLQVLTKLQYLDLWGSKISNSGSDVLQMFPKLSFLNIAWTSVT---- 221
Query: 244 HQLSSLSKLTNLSIRDAVL--TNSGLGSFKPPRSL 276
+ +L L L++ + ++ T GLG+ PPR L
Sbjct: 222 -KFPNLPHLECLNMSNCIIDSTLKGLGAKVPPRKL 255
>gi|186701224|gb|ACC91251.1| leucine-rich repeat family protein [Arabidopsis halleri]
Length = 600
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/380 (48%), Positives = 241/380 (63%), Gaps = 7/380 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
F LSFLNL+WT VT+ PNI LECL+++ CTI S + + + A L K+ L+G F E
Sbjct: 207 FSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIVSEPKTHSSLASLKKLVLSGANFSAET 266
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
EA + S +++LDVS +SL F FL M LEHLDLSS+ GDDSV VACVG NLRN
Sbjct: 267 EALSFTNKSSITYLDVSKTSLQNFSFLETMINLEHLDLSSTAFGDDSVGFVACVGENLRN 326
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDIKG 180
LN+S T+ +SAGVG LAGH+P LE SLS T +DD +I +S MMP +K +D+ T I+G
Sbjct: 327 LNVSETKITSAGVGNLAGHVPQLETFSLSQTFVDDLSILLISTMMPCVKALDLGMTSIRG 386
Query: 181 FI-QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
FI QQ E SL ALQ+L L+ L+LE + D L LS+ L HLSLR+ SLT
Sbjct: 387 FILQQSPQEEQAEPSLAALQSLTSLKTLSLEHPYLGDTALSALSSLTGLTHLSLRSTSLT 446
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
D +LH LSSL L +L +RDAVLT++GL F+PP+ L+ LDL G WLLT+D I CK +
Sbjct: 447 DSTLHHLSSLPNLVSLGVRDAVLTSNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKRY 506
Query: 300 PRIEVWHE--LSVICPSDQIGSNGPSPSRTSLRASLVKQKQDP---MPMSHSFLDQRLKY 354
P I+V HE +S +Q+ +P S + Q P + + SFLDQR+KY
Sbjct: 507 PHIKVRHEHDISSSLDQNQLLPRSSTPQTQSFGKLPRRNNQRPESYVAVPRSFLDQRVKY 566
Query: 355 SREELLELQYSSLSLARPDD 374
+REEL+ LQ S LS P +
Sbjct: 567 NREELVALQKSPLSQLLPRE 586
>gi|224058283|ref|XP_002299476.1| predicted protein [Populus trichocarpa]
gi|222846734|gb|EEE84281.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 208/283 (73%), Gaps = 1/283 (0%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
+E+LDLSSSMIGDDS+E VA +GA LRNLNL TR +SAGV IL GH+P LE LSLS T
Sbjct: 1 MEYLDLSSSMIGDDSIEAVASIGAILRNLNLGKTRVTSAGVAILVGHVPKLENLSLSHTL 60
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 213
+DD A+SY+ MMPSLK +D++NT I GFI Q GA +L+ SLTAL +L LE LNLE
Sbjct: 61 VDDLAMSYIGMMPSLKLVDLNNTIINGFIHQDGAGPNLISSLTALHSLKGLESLNLECAN 120
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+ DA + PLS F+EL LSL++ SLTD+SL+ LSSL K+ NL IRDAVLT+SGL SF+PP
Sbjct: 121 IKDAAVDPLSNFQELRLLSLKSPSLTDISLYHLSSLPKIRNLGIRDAVLTDSGLFSFRPP 180
Query: 274 RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASL 333
+L++LDL G WLLTEDAIL F K HP IE+ HE V+ SDQ + +P RT LR
Sbjct: 181 ATLEMLDLRGCWLLTEDAILSFRKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQ 239
Query: 334 VKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSS 376
V QKQ+ + +S F+DQRLKY+REELL LQ+ S SL P D S
Sbjct: 240 VNQKQEKLIVSQYFIDQRLKYTREELLALQFQSSSLGSPFDKS 282
>gi|297803756|ref|XP_002869762.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
gi|297315598|gb|EFH46021.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 179/376 (47%), Positives = 235/376 (62%), Gaps = 13/376 (3%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
F LSFLNL+WT VT+ PNI LECL+++ CTI S + + + A L K+ L+G F E
Sbjct: 207 FSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIVSEPKTHCSLASLKKLVLSGANFSAET 266
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
EA + S +++LDVS +SL F F+ M LEHLDLSS+ GDDSV VACVG NL+N
Sbjct: 267 EALSFTNKSSITYLDVSKTSLQNFSFIETMINLEHLDLSSTAFGDDSVGFVACVGENLKN 326
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDIKG 180
LN+S+T+ +SAGVG LAGH+P LE SLS T +DD +I +S MMP +K +D+ T I+
Sbjct: 327 LNVSDTKITSAGVGNLAGHVPQLETFSLSQTFVDDLSILLISTMMPCVKALDLGMTSIR- 385
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
E SL ALQ+L L+ L+LE + D L LS+ L HLSLR+ SLTD
Sbjct: 386 -------EEQAEPSLAALQSLTSLKTLSLEHPYLGDTALSALSSLTGLTHLSLRSTSLTD 438
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+LH LSSL L +L +RDAVLT++GL F+PP+ L+ LDL G WLLT+D I CK +P
Sbjct: 439 STLHHLSSLPNLVSLGVRDAVLTSNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKRYP 498
Query: 301 RIEVWHELSVICPSDQ----IGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSR 356
I+V HE DQ S+ P R S ++ + + + SFLDQR+KY+R
Sbjct: 499 HIKVRHEHDDSSSLDQNQFLPRSSTPQSFGKVPRRSNNQRPESSVAVPRSFLDQRVKYNR 558
Query: 357 EELLELQYSSLSLARP 372
EEL+ LQ S LS P
Sbjct: 559 EELVALQNSPLSQLLP 574
>gi|42567079|ref|NP_194115.3| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|20466546|gb|AAM20590.1| unknown protein [Arabidopsis thaliana]
gi|22136448|gb|AAM91302.1| unknown protein [Arabidopsis thaliana]
gi|51971383|dbj|BAD44356.1| putative protein [Arabidopsis thaliana]
gi|332659411|gb|AEE84811.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 231/375 (61%), Gaps = 4/375 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
F LSFLNL+WT +T+ PNI LECL+++ CTI S + + + A L K+ L+G F E
Sbjct: 207 FSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIVSEPKTHSSLASLKKLVLSGANFSAET 266
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
E+ + S +++LDVS +SL F FL M LEHLDLSS+ GDDSV VACVG NL+N
Sbjct: 267 ESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLEHLDLSSTAFGDDSVGFVACVGENLKN 326
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDIKG 180
LN+S+T+ + +GVG LAGH+P LE LS+S T +DD +I +S MP +K +D+ G
Sbjct: 327 LNVSDTQITPSGVGNLAGHVPQLETLSMSQTFVDDLSILLISTTMPCIKALDLGMNSTLG 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F + + + SL ALQ+L LE L+LE + D L LS+ L HLSL + SLTD
Sbjct: 387 FYYLISPQEEKEKSLAALQSLTSLETLSLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTD 446
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+LH LSSL L +L +RD VLT++GL F+PP L+ LDL G WLLT+D I CK +P
Sbjct: 447 STLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPPNRLRTLDLQGCWLLTKDDIAGLCKRYP 506
Query: 301 RIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDP---MPMSHSFLDQRLKYSRE 357
I+V HE + DQ S + S + Q P + + SFLDQR+KY+RE
Sbjct: 507 HIKVRHEHADSSSLDQNQLLPRSSTPQSFGKVARRNNQRPESSVAVPRSFLDQRVKYNRE 566
Query: 358 ELLELQYSSLSLARP 372
EL+ LQ S LS P
Sbjct: 567 ELVALQNSPLSQLLP 581
>gi|357134265|ref|XP_003568738.1| PREDICTED: uncharacterized protein LOC100844673 [Brachypodium
distachyon]
Length = 547
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/367 (46%), Positives = 241/367 (65%), Gaps = 5/367 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINE 60
F RLSFLN++WT VT+LP + +L+ LN+SNCTI SI +G+ E PL K ++ +F N
Sbjct: 161 FTRLSFLNVSWTHVTRLPPLPNLQHLNMSNCTIHSIRDGDSEVNVPLEKFTVCAASFGNI 220
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E F I+ S L +LD+S SLS +MK +EHLDLS S I D +++ VA +G NLR
Sbjct: 221 FEVFSSIQGSSLLYLDMSGCSLSNLHIFEKMKHIEHLDLSFSRITDAAIQHVANIGMNLR 280
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
+L+L NT +S ILAG +PNL LSL+ T+IDD A++Y+SMMPSL+ ID+S+T IKG
Sbjct: 281 HLSLKNTGITSQAPCILAGTVPNLSSLSLAYTEIDDSALAYISMMPSLRVIDLSHTSIKG 340
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F V ++ + S+ L++L +LE LNLE T +SD + PL++F+ + +L L++ L+D
Sbjct: 341 F-TCVEVNSEKIPSMPPLEHLMYLESLNLEDTALSDEVIPPLASFRAIKYLYLKSDFLSD 399
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+LH LSS S LT+L +L++SGL F PP L++LDL G W+LT DA+ FCK HP
Sbjct: 400 PALHALSSASNLTHLGFCGNILSDSGLLQFVPPAKLRVLDLSGCWILTGDAVSTFCKHHP 459
Query: 301 RIEVWHELSVICPSDQIGSNGPSPSRTSLRAS--LVKQKQDPMPMSH-SFLDQRLKYSRE 357
IEV HEL + G++ SR +A V ++ P +S F+D+R+KYSRE
Sbjct: 460 VIEVTHELWQELQPNSGGTSQVHKSRQLPKAKTEAVNRQAGPSRLSGIFFVDERIKYSRE 519
Query: 358 ELLELQY 364
EL+ELQ+
Sbjct: 520 ELMELQH 526
>gi|148909462|gb|ABR17829.1| unknown [Picea sitchensis]
Length = 455
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/386 (44%), Positives = 242/386 (62%), Gaps = 16/386 (4%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG-NENKAPLAKISLAGTTFINE 60
FP+L+ LNLAWT VT+LP + SL LN+S CTI+SIL+G E + L + +G +FI+
Sbjct: 55 FPKLNCLNLAWTNVTRLPALVSLTSLNMSKCTIESILDGLEEPEISLLTLHFSGASFIDA 114
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ L+FLD+S SS+ FL M LE LDLS + + D S+ VA +GANL+
Sbjct: 115 YRVLSCLHAQNLTFLDLSGSSIDNVSFLAGMNRLESLDLSCTGVIDSSMNSVADIGANLK 174
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
+LNLS TR +S + ILAG++P LE +SLS T +DD A++Y+ ++ +L+ I +S T+IKG
Sbjct: 175 HLNLSTTRVTSDALAILAGNVPKLEFISLSHTMVDDNALAYLGLISALRNISLSFTNIKG 234
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
FI +E++ SL +L+ L HLE L+LE T +SD PL KEL HLSLR+ L+D
Sbjct: 235 FIHVGESESNPQFSLASLRKLEHLEILDLENTHISDLACQPLIFLKELYHLSLRSDFLSD 294
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+SLH +SSL KL LSI+ AV+T +GL SF PP L++LDL WLLT + IL+F K +P
Sbjct: 295 ISLHTVSSLPKLKYLSIQGAVVTKTGLCSFVPPPLLQVLDLSDCWLLTMEGILEFWKTYP 354
Query: 301 RIEVWHELSVICPSDQIG-SNGPSPSRTSLRASLVKQKQ-----------DPMPMSHSFL 348
++++ HEL V DQ S G S ++ A VKQ + P F+
Sbjct: 355 QLQLRHELIVTIFEDQTHRSRGNMFSYETMEAFTVKQGRKSRSRASSSSLHEKPTQRKFI 414
Query: 349 DQRLKYSREELLELQ---YSSLSLAR 371
D+R+KYS+ ELL ++ +S+LS +
Sbjct: 415 DERIKYSKSELLRIRAGVHSALSFSE 440
>gi|326513166|dbj|BAK06823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/366 (45%), Positives = 234/366 (63%), Gaps = 5/366 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINE 60
F L FLN++WT VT+LP++ +++ LN+SNCTI SI G+ E PL K + + +F +
Sbjct: 241 FTGLRFLNVSWTHVTRLPHLPNMKYLNMSNCTIYSICGGDSEVHIPLQKFTASAASFGDI 300
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E F I S SFLD+S SLS L +MK+LEHLD+S + + DD+VE VA +G LR
Sbjct: 301 DEVFSSIVASSFSFLDMSGCSLSNLYGLQKMKSLEHLDISLNRVTDDAVEYVANIGMKLR 360
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L NT +S + ILAG +PNL LSL+ T+IDD A+ Y+SMMPSL+ ID+S+T IKG
Sbjct: 361 YLSLKNTGITSQALCILAGTVPNLASLSLAYTKIDDSALVYISMMPSLRVIDLSHTTIKG 420
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F +V A ++ + SL L++L +LE LNLE +SD + P+++F+ L +L L++ L+D
Sbjct: 421 F-TRVEANSEKIPSLPLLEHLIYLESLNLEDAPLSDEVIPPMTSFRALKYLYLKSDFLSD 479
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
LH LSS S L +L +VL+NSGL F PP L +LDL G W+LT DAI F + HP
Sbjct: 480 PGLHALSSASNLIHLGFCGSVLSNSGLLEFVPPAQLHVLDLSGCWILTGDAISTFRRHHP 539
Query: 301 RIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHS---FLDQRLKYSRE 357
IEV HEL+ ++ G++ SR RA HS F+DQR+KYSRE
Sbjct: 540 SIEVRHELTQELQPNRGGTSQVHKSRQLPRAKTKVVNSSADSRRHSGIFFVDQRIKYSRE 599
Query: 358 ELLELQ 363
E++E+Q
Sbjct: 600 EMMEIQ 605
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 139 GHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
G L +L L+ + +D AI +S M LK +D+S I G +
Sbjct: 117 GSFRYLGVLKLADCKKVDHSAIWPLSGMSMLKELDLSRC---SKITDAG--------IKH 165
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ +++ LE+L+L +T ++D + +S K LI L L +TD +L L L++L +L +
Sbjct: 166 IVSIDSLEKLHLSETGLTDNGVMLISALKGLILLDLGGIHMTDKALRSLQVLTQLEHLDV 225
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDL 281
+ +T+ G + L+ L++
Sbjct: 226 WGSEITDEGASILEAFTGLRFLNV 249
>gi|215769345|dbj|BAH01574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 237/372 (63%), Gaps = 8/372 (2%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINE 60
F LSFLN++WT VT LP + +L CLN+SNCTI SI G + L K+ ++ +F N
Sbjct: 98 FTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNI 157
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E F I S L++LD+S+ S S FL M+ LEHLDLS S I D++E +A +G NL+
Sbjct: 158 DEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLK 217
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+LSN+ +S + +LAG +P+L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IKG
Sbjct: 218 FLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKG 277
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F+ + + VLSL+AL+ L +LE LNL TQ+ D + PL++ + L +L L++ L+D
Sbjct: 278 FMMENSVK---VLSLSALEELKYLESLNLNNTQLMDDVIPPLASLRALKYLFLKSDFLSD 334
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+LH LSS S L +L +L+ +GL F PP +L++LDL G W+LT DAI FC HP
Sbjct: 335 PALHALSSASNLIHLGFCGNILSTTGLRKFVPPATLRMLDLSGCWILTGDAISAFCTCHP 394
Query: 301 RIEVWHELSVICPSDQIGS---NGPSPSRTSLRASLVKQKQDPMPMSH-SFLDQRLKYSR 356
IEV HEL ++ G+ + S ++A + K P ++ F+D+R+KYS+
Sbjct: 395 VIEVRHELIQELQANYGGTSHLHKSSRQPQQVKAKVAKSSAGPSRLAEICFVDERIKYSK 454
Query: 357 EELLELQYSSLS 368
EE++ELQ+ + S
Sbjct: 455 EEMMELQHQAKS 466
>gi|218196286|gb|EEC78713.1| hypothetical protein OsI_18882 [Oryza sativa Indica Group]
Length = 601
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 237/372 (63%), Gaps = 8/372 (2%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINE 60
F LSFLN++WT VT LP + +L CLN+SNCTI SI G + L K+ ++ +F N
Sbjct: 216 FTSLSFLNISWTRVTCLPILLTLRCLNMSNCTIHSICNGEFQVLIHLEKLVISAASFGNI 275
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E F I S L++LD+S+ S S FL M+ LEHLDLS S I D++E +A +G NL
Sbjct: 276 DEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLM 335
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+LSN+ +S + +LAG +P+L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IKG
Sbjct: 336 FLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKG 395
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F+ + + VLSL+AL+ L +LE LNL TQ+ D + PL++F+ L +L L++ L+D
Sbjct: 396 FMMENSVK---VLSLSALEELKYLESLNLNNTQLMDDVIPPLASFRALKYLFLKSDFLSD 452
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+LH LSS S L +L +L+ +GL F PP +L++LDL G W+LT DAI FC HP
Sbjct: 453 PALHALSSASNLIHLGFCGNILSTTGLRKFVPPATLRMLDLSGCWILTGDAISAFCTCHP 512
Query: 301 RIEVWHELSVICPSDQIGS---NGPSPSRTSLRASLVKQKQDPMPMSH-SFLDQRLKYSR 356
IEV HEL ++ G+ + S ++A + K P ++ F+D+++KYS+
Sbjct: 513 VIEVRHELIQELQANYGGTSHLHKSSRQPQQVKAKVAKSLAGPSRLADICFVDEKIKYSK 572
Query: 357 EELLELQYSSLS 368
EE++ELQ+ + S
Sbjct: 573 EEMMELQHQAKS 584
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 139 GHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
G L +L L+ + ++ A+ +S M +LK +D+S I G +
Sbjct: 92 GAFRYLRVLKLADCKNVNSSAVWALSGMSTLKELDLSRCSK---ISDAG--------IKH 140
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ ++ LE+L++ QT ++D + +S+ L L L TD +L L L++L +L I
Sbjct: 141 IASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQVLTQLEHLDI 200
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDL 281
+ +TN G SL L++
Sbjct: 201 WGSEITNEGASVLIAFTSLSFLNI 224
>gi|4972088|emb|CAB43884.1| putative protein [Arabidopsis thaliana]
gi|7269233|emb|CAB81302.1| putative protein [Arabidopsis thaliana]
Length = 364
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 210/348 (60%), Gaps = 4/348 (1%)
Query: 29 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 88
++ CTI S + + + A L K+ L+G F E E+ + S +++LDVS +SL F FL
Sbjct: 1 MNTCTIVSEPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFL 60
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 148
M LEHLDLSS+ GDDSV VACVG NL+NLN+S+T+ + +GVG LAGH+P LE LS
Sbjct: 61 ETMFNLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLS 120
Query: 149 LSGTQIDDYAISYMS-MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+S T +DD +I +S MP +K +D+ GF + + + SL ALQ+L LE L
Sbjct: 121 MSQTFVDDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETL 180
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+LE + D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT++GL
Sbjct: 181 SLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGL 240
Query: 268 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRT 327
F+PP L+ LDL G WLLT+D I CK +P I+V HE + DQ S +
Sbjct: 241 EKFRPPNRLRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQNQLLPRSSTPQ 300
Query: 328 SLRASLVKQKQDP---MPMSHSFLDQRLKYSREELLELQYSSLSLARP 372
S + Q P + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 301 SFGKVARRNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 348
>gi|308044417|ref|NP_001183765.1| hypothetical protein [Zea mays]
gi|238014428|gb|ACR38249.1| unknown [Zea mays]
gi|413949466|gb|AFW82115.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 547
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 229/381 (60%), Gaps = 17/381 (4%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE-GNENKAPLAKISLAGTTFINE 60
F RL LNLA T V L + LN+SNC I SI + +E PL ++ TF N
Sbjct: 159 FARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNI 218
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ F I+ S L LD+S+ LS FL +MK LEHLDLS ++I D ++E +A +G NL+
Sbjct: 219 DKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQ 278
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L NT +S + ILAG +PNL LSL+ T+IDD A++Y+ M+P L+ ID+S T IKG
Sbjct: 279 YLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKG 338
Query: 181 FIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
FI +V +E +LS++A ++L +LE LNLE T +S + PL++F L +L L++ L+
Sbjct: 339 FIHTEVNSEK--LLSMSAFEHLKYLESLNLEDTPLSAEVIPPLASFATLKYLYLKSDFLS 396
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
D +LH LS+ S L +L R +L++ GL F PP +L +LDL G W+LT DAI F K H
Sbjct: 397 DPALHALSAASNLIHLGFRGNILSSFGLLQFVPPVTLCVLDLSGCWILTGDAISTFRKRH 456
Query: 300 PRIEVWHELSVICPSDQI-GSNGPSPSRTSLRASLVKQKQDPMPMSHS------FLDQRL 352
P IE+ HEL + + GS P R R+ VK + S F+D+R+
Sbjct: 457 PTIELRHELLHEVEENFVGGSQFRKPRRR--RSPHVKAEVGNSFAGSSRLHDIRFVDERI 514
Query: 353 KYSREELLELQYSSLSLARPD 373
KYS+EE +ELQ LA+P+
Sbjct: 515 KYSKEEFVELQ----GLAKPN 531
>gi|413949465|gb|AFW82114.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 606
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 229/381 (60%), Gaps = 17/381 (4%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE-GNENKAPLAKISLAGTTFINE 60
F RL LNLA T V L + LN+SNC I SI + +E PL ++ TF N
Sbjct: 218 FARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNI 277
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ F I+ S L LD+S+ LS FL +MK LEHLDLS ++I D ++E +A +G NL+
Sbjct: 278 DKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQ 337
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L NT +S + ILAG +PNL LSL+ T+IDD A++Y+ M+P L+ ID+S T IKG
Sbjct: 338 YLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKG 397
Query: 181 FIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
FI +V +E +LS++A ++L +LE LNLE T +S + PL++F L +L L++ L+
Sbjct: 398 FIHTEVNSEK--LLSMSAFEHLKYLESLNLEDTPLSAEVIPPLASFATLKYLYLKSDFLS 455
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
D +LH LS+ S L +L R +L++ GL F PP +L +LDL G W+LT DAI F K H
Sbjct: 456 DPALHALSAASNLIHLGFRGNILSSFGLLQFVPPVTLCVLDLSGCWILTGDAISTFRKRH 515
Query: 300 PRIEVWHELSVICPSDQI-GSNGPSPSRTSLRASLVKQKQDPMPMSHS------FLDQRL 352
P IE+ HEL + + GS P R R+ VK + S F+D+R+
Sbjct: 516 PTIELRHELLHEVEENFVGGSQFRKPRRR--RSPHVKAEVGNSFAGSSRLHDIRFVDERI 573
Query: 353 KYSREELLELQYSSLSLARPD 373
KYS+EE +ELQ LA+P+
Sbjct: 574 KYSKEEFVELQ----GLAKPN 590
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 139 GHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
G L +L L+ + I++ A+ +S M +LK +D+S I G +
Sbjct: 94 GSFRYLRVLKLADCKNINNDAVWSLSGMNTLKELDLSRCKK---ISDAG--------IKH 142
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ + LE+L+L +T+++D + +S+ L L L +TD +L L L+KL +L I
Sbjct: 143 IVTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGGILMTDKTLQSLQVLTKLEHLDI 202
Query: 258 RDAVLTNSGLGSFK 271
+ TN G + K
Sbjct: 203 WGSETTNEGASALK 216
>gi|242089917|ref|XP_002440791.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
gi|241946076|gb|EES19221.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
Length = 608
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 224/383 (58%), Gaps = 19/383 (4%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL-EGNENKAPLAKISLAGTTFINE 60
F RL FLNLA T V L + CLN+SNC I SI E +E PL ++ TF N
Sbjct: 218 FARLIFLNLALTRVNHLSIPPTTRCLNMSNCEIHSICDEDSEVPVPLENFIVSAATFGNI 277
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ F I+ S L+ LD+S+ LS FL +MK LEHLDLS ++I D ++E +A +G NL+
Sbjct: 278 DKVFSSIQASSLTHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKLGTNLQ 337
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L NT +S + ILAG +PNL LSL+ T+IDD A++Y+ M+P L+ ID+S T IKG
Sbjct: 338 YLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKG 397
Query: 181 FIQQVGAETDLVL-----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
E L ++A ++L +LE LNLE T +S + PL++ L +L L++
Sbjct: 398 ----CALENKFYLMAGFTHMSAFEHLKYLESLNLEDTPLSAEVIPPLASLAALKYLYLKS 453
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 295
L+D +LH LS+ S L +L +L++SGL F PP +L +LDL G W+LT +AI F
Sbjct: 454 DFLSDPALHALSAASNLIHLGFCGNILSSSGLLQFVPPTTLCVLDLSGCWILTGEAISTF 513
Query: 296 CKMHPRIEVWHELSVICPSDQI-GSNGPSPSRTS---LRASLVKQKQDPMPMSH-SFLDQ 350
K HP IE+ HEL ++ + GS P R +++ + P + F+D+
Sbjct: 514 RKRHPTIELRHELMEEVQANFVGGSQFRKPRRRQSPHVKSEVGNSFAGPSRLRDICFVDE 573
Query: 351 RLKYSREELLELQYSSLSLARPD 373
R+KYS+EE +ELQ L +P+
Sbjct: 574 RIKYSKEEFMELQ----GLVKPN 592
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 139 GHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
G L +L+L+ + ID+ A+ +S M +LK +D+S I G +
Sbjct: 94 GSFRFLRVLTLADCKNIDNDAVWSLSGMNTLKDLDLSRCKK---ISDAG--------IKH 142
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ + LE+L+L +T++++ + +S+ L L L +TD SL L L++L +L I
Sbjct: 143 IVTIESLEKLHLSETELTNNGVMLISSLTNLSFLDLGGILMTDKSLQSLQVLTRLEHLDI 202
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDL 281
+ TN G + K L L+L
Sbjct: 203 WGSETTNEGASTLKSFARLIFLNL 226
>gi|302802011|ref|XP_002982761.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
gi|300149351|gb|EFJ16006.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
Length = 516
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 181/315 (57%), Gaps = 12/315 (3%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
FPRL LNLAWT V+ +P++ + LNLS+C + S+ +E + L ++ L+G T +
Sbjct: 205 FPRLEILNLAWTKVSVVPSMPRVSQLNLSHCVVLSV---SEEGSALDQLRLSGATIQDPL 261
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLR 120
LS L++S ++L+ FL +K + LDLSS + D++ ++A NL+
Sbjct: 262 RVLHSHSLPELSVLELSATNLAALTFLGSLKRVVKLDLSSMPSVSSDTMNLLAKCARNLK 321
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
+L+LS+TR S GV +L GH+P LE LSL GT I D Y+ +MP L ID+SNT + G
Sbjct: 322 HLDLSDTRVGSEGVAVLTGHVPALEHLSLRGTSITDSVFGYLGLMPLLIDIDLSNTSLTG 381
Query: 181 F-------IQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+ A D S+ LQ L++L RL+L +T+ SD + L+ L HL
Sbjct: 382 MPVFEFTKVYYTCAPVDSSFWSVLHLQQLHNLRRLDLRRTRFSDKSCKRLACLVRLTHLL 441
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
L LTD SLH+LS+L L +L+ + VLT++GL S KPP L+ LDL WLLTE +
Sbjct: 442 LCAEFLTDASLHELSALPNLRSLAFQGTVLTDAGLRSLKPPPPLEELDLTDCWLLTEGCL 501
Query: 293 LQFCKMHPRIEVWHE 307
LQFC + + V H+
Sbjct: 502 LQFCDYYRSVTVKHD 516
>gi|168052598|ref|XP_001778727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669846|gb|EDQ56425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 178/310 (57%), Gaps = 2/310 (0%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL-EGNENKAPLAKISLAGTTFINE 60
F L +LNLA T VT +P ++SL LNL NC ++SI +G + + L ++ L+G + ++
Sbjct: 216 FKTLKYLNLAMTAVTAIPQLNSLLSLNLCNCDVESIYGDGTFSDSLLRELFLSGAS-LSL 274
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
++ T L LD+++S ++ + L LDL ++ + ++ + +G NLR
Sbjct: 275 KDVISGSNTRNLHLLDLASSRVNDLDAFVHIPKLAILDLRATGLTNELMLKFQGLGDNLR 334
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
++LS T+ S GVG +AGH PN+E LSL+ T +DD Y+ P L+ +++ + + G
Sbjct: 335 WIDLSYTKIDSEGVGAIAGHAPNVEQLSLNHTPVDDNVFIYLVHFPVLQSLNLGGSKVNG 394
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F+ E + L+ L+ L HL RL++ T V DA L L +L HL + + SL+D
Sbjct: 395 FMTVGSEEFQQISVLSYLEQLQHLRRLDMRYTGVGDAALHGLKNLVQLSHLHIHSNSLSD 454
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
L QLSS L L I A +T GL S+KPP L+ LDL WLLTE A+L FC+ HP
Sbjct: 455 ECLQQLSSFPNLVCLGIGGATITADGLLSYKPPSLLEELDLTDCWLLTEPALLDFCEAHP 514
Query: 301 RIEVWHELSV 310
RI VW+E +V
Sbjct: 515 RIMVWNEKTV 524
>gi|222630606|gb|EEE62738.1| hypothetical protein OsJ_17541 [Oryza sativa Japonica Group]
Length = 973
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINE 60
F LSFLN++WT VT LP + +L CLN+SNCTI SI G + L K+ ++ +F N
Sbjct: 758 FTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNI 817
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E F I S L++LD+S+ S S FL M+ LEHLDLS S I D++E +A +G NL+
Sbjct: 818 DEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLK 877
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
L+LSN+ +S + +LAG +P+L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IK
Sbjct: 878 FLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIK 936
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 64/346 (18%)
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRN 121
AF Y+ +L D N + S L+ M+ L+ LDLS S I D ++ +A + +L
Sbjct: 635 AFRYLR--VLKLADCKNVNSSAVWALSGMRTLKELDLSRCSKISDAGIKHIASI-ESLEK 691
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
L++S T + GV ++ L NL +L L G + D A+ + ++ L+ +DI ++I
Sbjct: 692 LHVSQTGLTDNGVMAIS-SLINLRLLDLGGVRFTDKALRSLQVLTQLEHLDIWGSEIT-- 748
Query: 182 IQQVGAETDLVLSLTALQNLN-HLERLN-------LEQTQVSDATLFPL--STFKELIHL 231
GA ++++ T+L LN R+ L +S+ T+ + F+ LIHL
Sbjct: 749 --NEGAS--VLIAFTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHSICNGEFQVLIHL 804
Query: 232 S---LRNASLTDVSLHQLSSL--SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+ AS ++ SS+ S LT L + ++S L R+L+ LDL +
Sbjct: 805 EKLIISAASFGNID-EVFSSILPSSLTYLDMSSC--SSSNLYFLGNMRNLEHLDLSYSRI 861
Query: 287 LTEDAI---------LQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 337
++ DAI L+F + L V+ G PS T+L SL K
Sbjct: 862 IS-DAIEYIANIGMNLKFLSLSNSEVTSQALCVLA--------GTVPSLTTL--SLAHTK 910
Query: 338 QDP--------MP------MSHSFL-DQRLKYSREELLELQYSSLS 368
D MP +S + + D+R+KYS+EE++ELQ+ + S
Sbjct: 911 IDDSALLYISMMPSLRILNLSRTCIKDERIKYSKEEMMELQHQAKS 956
>gi|413949467|gb|AFW82116.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 343
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE-GNENKAPLAKISLAGTTFINE 60
F RL LNLA T V L + LN+SNC I SI + +E PL ++ TF N
Sbjct: 159 FARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNI 218
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ F I+ S L LD+S+ LS FL +MK LEHLDLS ++I D ++E +A +G NL+
Sbjct: 219 DKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQ 278
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L NT +S + ILAG +PNL LSL+ T+IDD A++Y+ M+P L+ ID+S T IKG
Sbjct: 279 YLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKG 338
>gi|118483021|gb|ABK93422.1| unknown [Populus trichocarpa]
Length = 107
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 278 LLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 337
+LDL G WLLTEDAIL FCK HP IE+ HE V+ SDQ + +P RT LR V QK
Sbjct: 1 MLDLRGCWLLTEDAILSFCKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQVNQK 59
Query: 338 QDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSS 376
Q+ + +S F+DQRLKY+REELL LQ+ S SL P D S
Sbjct: 60 QEKLIVSQYFIDQRLKYTREELLALQFQSSSLGSPFDKS 98
>gi|224120462|ref|XP_002331054.1| predicted protein [Populus trichocarpa]
gi|222872984|gb|EEF10115.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 48/309 (15%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTF----I 58
++S N+ GV+ L + L LNL C I + L+ A LA ++L
Sbjct: 260 QISNTNVTDVGVSYLRGLQKLIMLNLEGCNITTACLDSISALATLAYLNLNRCHLPDDGC 319
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
++ ++ L+F DV+++ L L +K LE L+L S IGD+ + +A G
Sbjct: 320 DKFSGLKNLKVLSLAFNDVTDACLVH---LKGLKNLESLNLDSCRIGDEGIANLA--GLP 374
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L++L LS+T S+G+ L+G +P+LE L+LS T + D + +S + SL+ +++ I
Sbjct: 375 LKSLELSDTIVGSSGLRHLSG-IPHLENLNLSFTLVTDGGLRKLSGLTSLRSLNLDARQI 433
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK------------ 226
TD LTAL +L L RL+L +++D+ L FK
Sbjct: 434 ----------TDA--GLTALTSLTGLTRLDLFGARITDSGTNCLKYFKNLKSLEICGGGL 481
Query: 227 ---------ELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+L+HL++ +N +LTD +L +S L++L +L++ ++++TN GL KP
Sbjct: 482 TDAGVKNIKDLVHLTVLNLSQNTNLTDKTLELISGLTELVSLNVSNSLITNEGLRYLKPL 541
Query: 274 RSLKLLDLH 282
++L+ L L
Sbjct: 542 KNLRALTLE 550
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 14 GVTKLPNISSLECLNL--SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + LE LN+ C D ++ L ++ ++ T + ++L L
Sbjct: 221 GLVHLKGLKKLESLNIRCCKCITDMDMKAISGLTNLKELQISNTNVTDVGVSYLRGLQKL 280
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
+ L++ +++ C ++ + L +L+L+ + DD + + + NL+ L+L+
Sbjct: 281 I-MLNLEGCNITTACLDSISALATLAYLNLNRCHLPDDGCDKFSGL-KNLKVLSLAFNDV 338
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + L G L NLE L+L +I D I+ ++ +P LK +++S+T VG+
Sbjct: 339 TDACLVHLKG-LKNLESLNLDSCRIGDEGIANLAGLP-LKSLELSDT-------IVGSS- 388
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L + HLE LNL T V+D L LS L L+L +TD L L+SL
Sbjct: 389 ----GLRHLSGIPHLENLNLSFTLVTDGGLRKLSGLTSLRSLNLDARQITDAGLTALTSL 444
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+ LT L + A +T+SG K ++LK L++ GG L
Sbjct: 445 TGLTRLDLFGARITDSGTNCLKYFKNLKSLEICGGGL 481
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 106 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSM 164
D +++++ G++L +++LS++ + AG+G+L NL+ ++L+ I D + ++S
Sbjct: 120 DSWMDVISSQGSSLLSVDLSDSDVTDAGLGLLK-DCSNLQAIALNYCNNISDNGLKHLSG 178
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
+ ++ + + + V AE + A L +LE L++E+ L L
Sbjct: 179 LTNITSLSLKKS------CSVTAE-----GMRAFSTLLNLENLDMERCSGIHGGLVHLKG 227
Query: 225 FKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
K+L L++R +TD+ + +S L+ L L I + +T+ G+ + + L +L+L G
Sbjct: 228 LKKLESLNIRCCKCITDMDMKAISGLTNLKELQISNTNVTDVGVSYLRGLQKLIMLNLEG 287
>gi|302796665|ref|XP_002980094.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
gi|302822036|ref|XP_002992678.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300139524|gb|EFJ06263.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300152321|gb|EFJ18964.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
Length = 578
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDS---ILEGNENKAPL----AKISLAGTTFINEREAF 64
G+ + ++ LE LNL NC S L G N L +K+ G TF+ + +
Sbjct: 222 GLVYIKGLTKLEKLNLGWCNCIRSSDMKQLSGLTNLLELQISRSKVKDFGITFLKDLKK- 280
Query: 65 LYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
L L++ ++ C + + +L L+L S I D + +G NL+NL
Sbjct: 281 -------LEVLNMEGCPVTFACMDTIAGLTSLTTLNLKSCYISDFGCRKLEGLG-NLKNL 332
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NLS T S AG+ L +L +L+ L+L +I D + + +LK +D+S++ I
Sbjct: 333 NLSYTNVSDAGMVYLK-NLKSLQFLNLDSCKIGDQGVQNFKNLVNLKSLDLSDSLIGNH- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
+L L L+ LE LN+ T V+D L +S L L++ + +TD
Sbjct: 391 -----------ALNFLTGLSKLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQITDTG 439
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
L L+SL+ LT+L + A +T+ G+GS + + L+ L++ GG
Sbjct: 440 LMALTSLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCGG 481
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 43/297 (14%)
Query: 14 GVTKLPNISSLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINE-----REAFLYI 67
G+T L ++ LE LN+ C + + ++ L ++L + +I++ E +
Sbjct: 271 GITFLKDLKKLEVLNMEGCPVTFACMDTIAGLTSLTTLNLK-SCYISDFGCRKLEGLGNL 329
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
+ LS+ +VS++ + +L +K+L+ L+L S IGD V+ + NL++L+LS++
Sbjct: 330 KNLNLSYTNVSDAGM---VYLKNLKSLQFLNLDSCKIGDQGVQNFKNL-VNLKSLDLSDS 385
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
+ + L G L LE L++S T + D + +S + SLK ++I + I
Sbjct: 386 LIGNHALNFLTG-LSKLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQI--------T 436
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQ---------------------VSDATLFPLSTFK 226
+T L ++LT+L NL HL+ + T ++D + L
Sbjct: 437 DTGL-MALTSLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCGGGITDVGVKSLKDLT 495
Query: 227 ELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+L +L+L +N LTD +L LS L+KL +L++ ++ +TN+GL P ++L L L
Sbjct: 496 DLTYLNLSQNGQLTDQALEALSGLTKLVSLNVGNSSVTNAGLQHLLPLKNLTSLALQ 552
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 41/262 (15%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
LS+ N++ G+ L N+ SL+ LNL +C I +G +N L
Sbjct: 334 LSYTNVSDAGMVYLKNLKSLQFLNLDSCKIGD--QGVQNFKNLVN--------------- 376
Query: 65 LYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
L LD+S+S + FLT + LE L++SS+M+ D + ++ + +L++L
Sbjct: 377 -------LKSLDLSDSLIGNHALNFLTGLSKLESLNISSTMVTDMGLHKISGL-TSLKSL 428
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
N+ + + + G+ L L NL L L +I DY I + L+ +++ G I
Sbjct: 429 NIDSRQITDTGLMALT-SLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCG----GGI 483
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDV 241
VG + +L++L L LNL Q Q++D L LS +L+ L++ N+S+T+
Sbjct: 484 TDVGVK--------SLKDLTDLTYLNLSQNGQLTDQALEALSGLTKLVSLNVGNSSVTNA 535
Query: 242 SLHQLSSLSKLTNLSIRDAVLT 263
L L L LT+L+++ +T
Sbjct: 536 GLQHLLPLKNLTSLALQSCKVT 557
>gi|59802533|gb|AAX07510.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 550
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS V+N L LT + AL DL S+ + D ++ + + NL +LNL T+ +
Sbjct: 25 LSATKVTNEGLKELKELTNLTAL---DLFSTGVTDTGLQELKGL-TNLTSLNLGVTQVTG 80
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
AG+ L G L NL L+L T + D + + + L +D+ T++ TD+
Sbjct: 81 AGLQELKG-LTNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLRGTEV----------TDV 129
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
L L+ LN L L L T+V++ L L L L LR+ +TDV L +L L+
Sbjct: 130 --GLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVGLQELKGLNN 187
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L +L +RD +T++GL K +L LDL
Sbjct: 188 LASLDLRDTKVTDTGLKELKGLTNLTALDL 217
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ LD+S + ++ L L LDLS + + D + + + +L +L+L TR
Sbjct: 236 LASLDLSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGLHQLKGL-TSLTSLHLGGTRV 294
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ G+ L G L +L L LSGT+ D + ++ + +L + +S+T + T
Sbjct: 295 TDVGLKELKG-LTSLTSLHLSGTRTTDAGLQELNGLTNLTSLHLSDTRV----------T 343
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
D+ L L++ L L+L T V+D L L L L L + +TDV L +L+ L
Sbjct: 344 DV--GLKELKSFTKLTSLHLGGTGVTDTGLKELKGLTNLTALDLFSTQVTDVGLQELNGL 401
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+KLT+L + A +T++GL K L LLDL G
Sbjct: 402 TKLTSLYLSAAAITDTGLKELKELTQLALLDLSG 435
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
ANL +L LS T+ ++ G+ L L NL L L T + D + + + +L +++
Sbjct: 18 ANLTSLGLSATKVTNEGLKELK-ELTNLTALDLFSTGVTDTGLQELKGLTNLTSLNL--- 73
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
G Q GA L L+ L +L LNL T V+DA L L +L L LR
Sbjct: 74 ---GVTQVTGA------GLQELKGLTNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLRGT 124
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+TDV L +L L+ LT L +R +TN GL K +L LDL
Sbjct: 125 EVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLR 170
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 26/300 (8%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSI----LEGNENKAPL--AKISLAGTTFINEREAFLY 66
TG+ +L +++L L+L + + + L G A L ++ + GT I E ++F
Sbjct: 201 TGLKELKGLTNLTALDLFSTQVTDVGLKELNGLTKLASLDLSRTGVTGTGLI-ELKSFTK 259
Query: 67 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 126
+ LS V+++ L + LT + +L L + + D ++ + + +L +L+LS
Sbjct: 260 LALLDLSGTRVTDAGLHQLKGLTSLTSLH---LGGTRVTDVGLKELKGL-TSLTSLHLSG 315
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
TR + AG+ L G L NL L LS T++ D + + L + + T +
Sbjct: 316 TRTTDAGLQELNG-LTNLTSLHLSDTRVTDVGLKELKSFTKLTSLHLGGTGV-------- 366
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
TD L L+ L +L L+L TQV+D L L+ +L L L A++TD L +L
Sbjct: 367 --TDT--GLKELKGLTNLTALDLFSTQVTDVGLQELNGLTKLTSLYLSAAAITDTGLKEL 422
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 306
L++L L + +T++GL L L L GG +T DA L+ K + H
Sbjct: 423 KELTQLALLDLSGTRVTDAGLQELSGLTKLAFLRL-GGTRVT-DAGLKELKGLTSLTSLH 480
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 36/292 (12%)
Query: 2 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGT 55
+L+ L+L+ TGVT +L + + L L+LS + D+ L + L + L GT
Sbjct: 233 LTKLASLDLSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGLHQLKGLTSLTSLHLGGT 292
Query: 56 TF----INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 111
+ E + + + LS +++ L LT + +L LS + + D ++
Sbjct: 293 RVTDVGLKELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSLH---LSDTRVTDVGLKE 349
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
+ L +L+L T + G+ L G L NL L L TQ+ D + ++ + L +
Sbjct: 350 LKSF-TKLTSLHLGGTGVTDTGLKELKG-LTNLTALDLFSTQVTDVGLQELNGLTKLTSL 407
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+S I TD L L+ L L L+L T+V+DA L LS +L L
Sbjct: 408 YLSAAAI----------TDT--GLKELKELTQLALLDLSGTRVTDAGLQELSGLTKLAFL 455
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF---------KPPR 274
L +TD L +L L+ LT+L + +T++GL PPR
Sbjct: 456 RLGGTRVTDAGLKELKGLTSLTSLHLSGTRVTDAGLQELSGLTNLTTTGPPR 507
>gi|452822896|gb|EME29911.1| leucine-rich repeat family protein [Galdieria sulphuraria]
Length = 588
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 46/317 (14%)
Query: 4 RLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
+L N AW G+T L N + LN+S + P L + +AGT
Sbjct: 234 KLEDFNCAWCFRLSDEGLTILSNFHRMRYLNISKTRVSQNFGRFLPGMPRLRVLKVAGTG 293
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
F ++R+A +L + +L LD+ +GD + + +
Sbjct: 294 F-SDRDAQ----------------------YLRGLYSLRELDVEGCSVGDPFLATIYAL- 329
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+R LNL T+ S GV + G++ L+ L+L I D+A+ ++S + LK +D+++T
Sbjct: 330 PRIRKLNLGYTKISERGVSLYLGNMLKLQYLNLDSCLIGDFAVEHLSRLEQLKCLDLTDT 389
Query: 177 DIK-----GFIQQVGAETDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLS 223
+ G ET L+L+ T+ L+NL LE L+L+ +SD L L
Sbjct: 390 TVSSSGLSGLANLTSLET-LILAYTSVSNSGLEHLKNLTKLESLSLDTRGISDDGLAYLK 448
Query: 224 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
K L HL L A +TD L +S +S L +L + +T++GL S R+L+ L+L
Sbjct: 449 KLKHLKHLDLFGAKVTDNGLRHISEISTLESLEVCAGGVTDAGLESIGKLRALRTLNLSQ 508
Query: 284 GWLLTEDAILQF-CKMH 299
+T+ ++ C H
Sbjct: 509 NHRITDAGLIHLSCLSH 525
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 2 FPRLSFLNLAWTGVTK------LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAG 54
PR+ LNL +T +++ L N+ L+ LNL +C I D +E L + L
Sbjct: 329 LPRIRKLNLGYTKISERGVSLYLGNMLKLQYLNLDSCLIGDFAVEHLSRLEQLKCLDLTD 388
Query: 55 TTFINEREAFLY----IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 110
TT + + L +ET +L++ VSNS L L + LE L L + I DD +
Sbjct: 389 TTVSSSGLSGLANLTSLETLILAYTSVSNSGLEH---LKNLTKLESLSLDTRGISDDGLA 445
Query: 111 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
+ +L++L+L + + G+ ++ + LE L + + D + + + +L+
Sbjct: 446 YLK-KLKHLKHLDLFGAKVTDNGLRHIS-EISTLESLEVCAGGVTDAGLESIGKLRALRT 503
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 217
+++S I G L L L+HL LNL T V D
Sbjct: 504 LNLSQNH---RITDAG--------LIHLSCLSHLTSLNLSYTNVGDG 539
>gi|406836026|ref|ZP_11095620.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 586
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 146/285 (51%), Gaps = 23/285 (8%)
Query: 5 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFI 58
L+ LNL +T G+++L +S L+ LNLS I D+ L+ L I L+ T
Sbjct: 101 LTSLNLRYTAISDVGLSELSEMSKLDTLNLSATQISDAGLDKLLALRNLTAIDLSETAIT 160
Query: 59 NEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ L + +L S +++S + + S L+ +K L+ L LS S I ++++ VA +
Sbjct: 161 DSALKPLSVLENL-STINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAAL- 218
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
NL L L NT S+ G+ L G L +L L+L T +DD ++ ++ + +LK +++ T
Sbjct: 219 RNLTTLELWNTPISADGLKSL-GTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQT 277
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ TD LS +L + +L LNL TQ++DA + ++ K+L L L
Sbjct: 278 GV----------TDTGLS--SLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGT 325
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
LTDV L L +L +L L I +T++G+ + LK+L L
Sbjct: 326 RLTDVGLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRL 370
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 42/299 (14%)
Query: 46 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSM 103
P+ IS AG N+R L L LD+SN+ ++ L ++ AL L+L +
Sbjct: 51 PIVGISFAGNARFNDRYVHLISPLGRLESLDLSNTQITDLGLKELRKLNALTSLNLRYTA 110
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
I D + ++ + + L LNLS T+ S AG+ L L NL + LS T I D A+ +S
Sbjct: 111 ISDVGLSELSEM-SKLDTLNLSATQISDAGLDKLLA-LRNLTAIDLSETAITDSALKPLS 168
Query: 164 MMPSLKFIDISNTDIKGF----IQQVGAETDLVLS-----------LTALQNLNHLE--- 205
++ +L I++S T I G + + LVLS + AL+NL LE
Sbjct: 169 VLENLSTINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLELWN 228
Query: 206 ------------------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
+LNL T + D L L+T L L+L +TD L LS
Sbjct: 229 TPISADGLKSLGTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGVTDTGLSSLS 288
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 306
+ LTNL++ D +T++G+ + + L L L G L D L+ K ++V
Sbjct: 289 QIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRL--TDVGLRALKTLGELDVLQ 345
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 135/317 (42%), Gaps = 53/317 (16%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGT 55
L LNL TGVT L I +L LNL++ I D+ + L ++ L GT
Sbjct: 266 LTNLKALNLMQTGVTDTGLSSLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGT 325
Query: 56 TF----------------------------INEREAFLYIETSLLSFLDVSNSSLSRFCF 87
+ E F +++ L VS+ L
Sbjct: 326 RLTDVGLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRLGSTKVSDEGLKSLLG 385
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L L+ L L + I D + +A + L L+L T + GV L G L NLE L
Sbjct: 386 LEH---LQSLGLGGTGITDVGAKQLASL-TTLTGLDLDATAVTDEGVRELGG-LSNLEYL 440
Query: 148 SLSGTQIDDYAISYMSMMPSLKFI-----DISNTDIKGFIQQVGAETDLVLSLT------ 196
SL T+I D +S + LK + IS+ +KG + + T L LS+T
Sbjct: 441 SLISTKISDDGVSGLGAFKKLKMLFLHNNQISDEGLKG-LNDLSQLTTLYLSMTQVTDVG 499
Query: 197 --ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L+NL HL+ L L TQ++DA L L+ EL L +RN ++TD L L+S LT+
Sbjct: 500 MKELKNLKHLKDLVLCDTQITDAGLKELTGLSELNVLVIRNVAVTDACLEHLTSFKNLTH 559
Query: 255 LSIRDAVLTNSGLGSFK 271
L I + +GL +FK
Sbjct: 560 LCIDVHRFSEAGLNAFK 576
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F + ++ L+ LT +KAL + + G S+ + NL NLNL++T+ +
Sbjct: 250 LGFTSLDDTGLAELATLTNLKALNLMQTGVTDTGLSSLSQIK----NLTNLNLNDTQITD 305
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT--------DIKGF-- 181
AG+ +A H +L L L GT++ D + + + L + I T ++ GF
Sbjct: 306 AGMVAIARH-KDLNELHLEGTRLTDVGLRALKTLGELDVLQIGKTAVTDAGVEELAGFKH 364
Query: 182 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
I ++G+ L +L L HL+ L L T ++D L++ L L L ++T
Sbjct: 365 LKILRLGSTKVSDEGLKSLLGLEHLQSLGLGGTGITDVGAKQLASLTTLTGLDLDATAVT 424
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTN---SGLGSFKPPRSLKLLDLH 282
D + +L LS L LS+ +++ SGLG+FK LK+L LH
Sbjct: 425 DEGVRELGGLSNLEYLSLISTKISDDGVSGLGAFKK---LKMLFLH 467
>gi|182407840|gb|ACB87911.1| F-box-containing protein 1 [Malus x domestica]
Length = 580
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 35/303 (11%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINER- 61
+LS N+ +G++ L + L LNL C + S L+ LA ++L + +E
Sbjct: 263 QLSNCNITDSGISYLKGLHKLRMLNLEGCNVTASCLQSISALVALAYLNLNRCSLSDEGC 322
Query: 62 ---EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
++ L F +++++ L +L + +LE L+L S IGD+ + +A + +
Sbjct: 323 DKFSGLTNLKVLSLGFNEITDACLM---YLKGLTSLESLNLDSCKIGDEGLANLAGL-TH 378
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L+NL LS+T S G+ L+G L NLE L+LS T + D ++ +S + SLK + N D
Sbjct: 379 LKNLELSDTEVGSNGLRHLSG-LKNLESLNLSFTLVTDSSLKRLSGLTSLKSL---NLDA 434
Query: 179 KGFIQQVGAETDLVLSLTALQNL------------NHLERL-NLEQTQVSDATL--FPLS 223
+ Q A + SLT L +L NHL+ NL+ ++ L +
Sbjct: 435 R---QITDAGLAAITSLTGLTHLDLFGARISDSGANHLKYFKNLQSLEICGGGLTDAGVK 491
Query: 224 TFKELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
K+L+ L+ +N +LT+ SL +S L+ L +L++ ++ +TN GL KP ++L+ L
Sbjct: 492 NIKDLVCLTWLNISQNCNLTNKSLELISGLTALVSLNVSNSRITNEGLQHLKPLKNLRSL 551
Query: 280 DLH 282
L
Sbjct: 552 TLE 554
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 25/270 (9%)
Query: 20 NISSLECLNLSNC-TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 78
N+ C+ S+ TI +++ NE + I+ +G +++ L L++
Sbjct: 238 NVRCCRCITDSDLKTISGLIDLNELQLSNCNITDSGISYLKGLHK--------LRMLNLE 289
Query: 79 NSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 136
+++ C ++ + AL +L+L+ + D+ + + + NL+ L+L + A +
Sbjct: 290 GCNVTASCLQSISALVALAYLNLNRCSLSDEGCDKFSGL-TNLKVLSLGFNEITDACLMY 348
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 196
L G L +LE L+L +I D ++ ++ + LK +++S+T +VG+ L
Sbjct: 349 LKG-LTSLESLNLDSCKIGDEGLANLAGLTHLKNLELSDT-------EVGSN-----GLR 395
Query: 197 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
L L +LE LNL T V+D++L LS L L+L +TD L ++SL+ LT+L
Sbjct: 396 HLSGLKNLESLNLSFTLVTDSSLKRLSGLTSLKSLNLDARQITDAGLAAITSLTGLTHLD 455
Query: 257 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+ A +++SG K ++L+ L++ GG L
Sbjct: 456 LFGARISDSGANHLKYFKNLQSLEICGGGL 485
>gi|149174278|ref|ZP_01852905.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
gi|148846823|gb|EDL61159.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
Length = 1815
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 17/232 (7%)
Query: 51 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL-TQMKALEHLDLSSSMIGDDSV 109
S A + ERE ++ + +++ S+++ L T+ + LDL + + DD +
Sbjct: 1219 STASEKPMTEREVAEWV-IGMGGWVNTGGKSITKIEQLPTEPFVINFLDLKGTSVKDDDL 1277
Query: 110 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 169
+ +A + L LNL NT S G+ L +P L +SL GTQI D Y+S MPSL
Sbjct: 1278 KRLAGL-KTLPKLNLENTLVSDTGLQYLK-DIP-LNYISLIGTQITDKGFGYLSNMPSLT 1334
Query: 170 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+ + +T I G E L+++ LE+L+ TQ+ L L K L
Sbjct: 1335 TLYVGST----AISNSGVE--------QLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLK 1382
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L + S++DV L L L L L + + + +SGL K ++LK+L L
Sbjct: 1383 ILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSL 1434
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
FL+ ++ S + +L QM+ LE + L + I D+ + + + NLR L LS T+ + G
Sbjct: 1560 FLESTSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGL-QNLRVLRLSKTKITGEG 1618
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIK----GFIQQVGAE 188
+G L LP L + ++ I + + M + L ++IS N+ + G+I+ +
Sbjct: 1619 LGHLK-DLPRLHTIDVNRAAITNSGMKAMGDLKQLTSLNISFNSQVDDTGLGYIEGLTKL 1677
Query: 189 TDLVL---------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
L L LQ + LE L L T ++ L L+ + L L L N +T
Sbjct: 1678 EKLFAHLVPKITDEGLKHLQGMKQLESLTLSSTGITTTGLEQLTKHESLSKLDLTNCKIT 1737
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
D L L L L +L + ++++GL + L+ LDL +T I K
Sbjct: 1738 DSGLEHLQDLKNLRDLRLDLTPVSDAGLQHLYSLKKLENLDLR-ETKVTSQGIADLQKAL 1796
Query: 300 PRIEVWHELSVICPS 314
P+ ++ + P+
Sbjct: 1797 PKCKIESDFKTKPPA 1811
>gi|108763744|ref|YP_632240.1| leucine-rich repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108467624|gb|ABF92809.1| leucine-rich repeat domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 126/273 (46%), Gaps = 20/273 (7%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+ L LE L+LS+ +D + APL ++L+GT N L SL
Sbjct: 226 GLGFLARQPGLEELDLSDTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRR 285
Query: 74 F-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
L + +S + +T ++ LE L L S+ + D + +A + A LR L LS R A
Sbjct: 286 LGLARTAASDASLLHITGLRELEALHLGSTQVTDAGLLHLAKLPA-LRALVLSKARIRGA 344
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ-----VGA 187
G+ LAG L LE L L T + D A+ ++ + L+ +D+S T I G Q V
Sbjct: 345 GLRHLAG-LSRLEALHLDDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVAL 403
Query: 188 ET----DLVL---SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
E+ L L SLTAL L+ L RL L T + L L + L HL L TD
Sbjct: 404 ESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTD 463
Query: 241 ---VSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
S+ Q + L +L +LT++GLG F
Sbjct: 464 EWVPSIRQ--AFPGLHSLKAERTLLTDAGLGQF 494
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 50 ISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 108
+ ++GT F N A L T L + L+ + + L +M+ L L L + + D
Sbjct: 143 LQVSGTDFGNAHLASLENATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAG 202
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP-- 166
+ ++ LR + L+ T S G+G LA P LE L LS T +DD ++ + P
Sbjct: 203 LASLSE-HTTLRRVTLAGTAVSPQGLGFLARQ-PGLEELDLSDTAVDDTVLAVLPGAPLH 260
Query: 167 --SLKFIDISNTDIKGF-----IQQVG----AETDLVLSLTALQNLNHLERLNLEQTQVS 215
+L ++N ++G ++++G A +D SL + L LE L+L TQV+
Sbjct: 261 TLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDA--SLLHITGLRELEALHLGSTQVT 318
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
DA L L+ L L L A + L L+ LS+L L + D ++ +S L +
Sbjct: 319 DAGLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNE 378
Query: 276 LKLLDL 281
L+ LDL
Sbjct: 379 LRELDL 384
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 49/282 (17%)
Query: 18 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER---EAFL--YIETSLL 72
L N + LE L+L+ + N APL ++ ++E +A L E + L
Sbjct: 158 LENATQLEALHLNATRVT-----NVGLAPLKRMRRLAVLRLDETPVSDAGLASLSEHTTL 212
Query: 73 SFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+ ++ +++S FL + LE LDLS + + DD+V + GA L LNLS T+ +
Sbjct: 213 RRVTLAGTAVSPQGLGFLARQPGLEELDLSDTAV-DDTV-LAVLPGAPLHTLNLSGTKVT 270
Query: 131 SAGVGILAG-----------------------HLPNLEILSLSGTQIDDYAISYMSMMPS 167
+AG+ L+ L LE L L TQ+ D + +++ +P+
Sbjct: 271 NAGLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLGSTQVTDAGLLHLAKLPA 330
Query: 168 LKFIDISNTDIKGF----------IQQVGAETDLVL--SLTALQNLNHLERLNLEQTQVS 215
L+ + +S I+G ++ + + LV +L L+ LN L L+L +T ++
Sbjct: 331 LRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRELDLSRTAIT 390
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L LST L L L +LTD SL L+ LS+LT L++
Sbjct: 391 GTGLQELSTLVALESLWLSGLALTDDSLTALAPLSQLTRLAL 432
>gi|168012567|ref|XP_001758973.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689672|gb|EDQ76042.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 584
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 43/296 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY------ 66
TG+TKL ++S C +++ ++SI L G +N FL+
Sbjct: 280 TGLTKLRSLSMEGCQAVTSKGMESI------------GGLTGVWHLNVNSCFLHDSGFQK 327
Query: 67 ------IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ T + + +VSNS + FL + LE L+L S IGD +E V + NL+
Sbjct: 328 LEGLINLRTLNMGYNNVSNSGMG---FLKGLTNLERLNLDSCKIGDHGIENVKGL-VNLK 383
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFID-----IS 174
L+LS+T SAG+ L G L NLE L+LS T I D + ++ + SL ++ I+
Sbjct: 384 MLDLSDTEIESAGLRFLTG-LKNLESLNLSFTGGIADSGLRTIATITSLTSLNLDSKQIT 442
Query: 175 NTDIKGFIQQVGAET-DLV------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
+T + G +T DL + L++ L+ L L ++DA + +
Sbjct: 443 DTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQTLELCGGGITDAGVRSIKDLTS 502
Query: 228 LIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L L+L +N LTD SL LS + L +L++ ++ +TN+GL +P +L L L
Sbjct: 503 LTSLNLSQNMRLTDNSLQYLSGMKNLVSLNLANSRVTNAGLQHLRPLTNLTSLALQ 558
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 42/263 (15%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
+ + N++ +G+ L +++LE LNL +C I G EN L
Sbjct: 339 MGYNNVSNSGMGFLKGLTNLERLNLDSCKIGD--HGIENVKGLVN--------------- 381
Query: 65 LYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRN 121
L LD+S++ + + FLT +K LE L+LS + I D + +A + +L +
Sbjct: 382 -------LKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRTIATI-TSLTS 433
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
LNL + + + G+ L G L L+ L L G +I DY ++ + L+ +++ G
Sbjct: 434 LNLDSKQITDTGLAALTG-LTGLKTLDLFGARITDYGMACLRHFKKLQTLELCG----GG 488
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTD 240
I G ++++L L LNL Q +++D +L LS K L+ L+L N+ +T+
Sbjct: 489 ITDAGVR--------SIKDLTSLTSLNLSQNMRLTDNSLQYLSGMKNLVSLNLANSRVTN 540
Query: 241 VSLHQLSSLSKLTNLSIRDAVLT 263
L L L+ LT+L+++D +T
Sbjct: 541 AGLQHLRPLTNLTSLALQDCKVT 563
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 16/218 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ + HL+++S + D + + + NLR LN+ S++G+G L G L NLE L+L
Sbjct: 307 LTGVWHLNVNSCFLHDSGFQKLEGL-INLRTLNMGYNNVSNSGMGFLKG-LTNLERLNLD 364
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTA--------- 197
+I D+ I + + +LK +D+S+T+I+ F+ + L LS T
Sbjct: 365 SCKIGDHGIENVKGLVNLKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRT 424
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ + L LNL+ Q++D L L+ L L L A +TD + L KL L +
Sbjct: 425 IATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQTLEL 484
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 295
+T++G+ S K SL L+L LT+++ LQ+
Sbjct: 485 CGGGITDAGVRSIKDLTSLTSLNLSQNMRLTDNS-LQY 521
>gi|168701031|ref|ZP_02733308.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 389
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 35/282 (12%)
Query: 2 FPRLSFLNLAWTGVT--KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
FP+L+ LN+++T +T L I+ L L++ +D K+S +G +
Sbjct: 89 FPKLTVLNVSYTQITDEGLREIAGLT--ELTDLVLD-----------YTKVSGSG---LK 132
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
A + T L V+++ L L ++ L LDL + + D ++ +A + + L
Sbjct: 133 HLAALTKLRTLSLGSKIVTDAGLRG---LVGVRGLRQLDLRETSVTDAGLKEIAPL-SEL 188
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
+ L L N + G+ LA L L+ L LSGT+I +S ++ + SL+ +++ T +
Sbjct: 189 KTLMLVNAPVTGPGLKDLA-LLTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGGTPL- 246
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
TD L L + L L L T+V+ A L L+ K+L L L + +T
Sbjct: 247 ---------TDA--GLKQLAGFDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKIT 295
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
D L ++++L+ LT L++RD +T++G+ + P L+ L+L
Sbjct: 296 DADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNL 337
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
ET+ + F++ S + FL+ A+ +DLS + D+ + A L NLNL+NT
Sbjct: 22 ETAAVQFVEKSGGRV----FLSD-GAVTGVDLSGAKTFTDAGLKELSLFAGLTNLNLTNT 76
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
+ + A + +A P L +L++S TQI D + ++ + L + + T + G
Sbjct: 77 QVTDAALKDVA-RFPKLTVLNVSYTQITDEGLREIAGLTELTDLVLDYTKVSGS------ 129
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L L L L L+L V+DA L L + L L LR S+TD L +++
Sbjct: 130 ------GLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLRQLDLRETSVTDAGLKEIA 183
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
LS+L L + +A +T GL L+ L L G
Sbjct: 184 PLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSG 219
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 24/262 (9%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNL-SNCTIDSILEGNENKAPLAKISLAGTTF----IN 59
L + ++ +G+ L ++ L L+L S D+ L G L ++ L T+ +
Sbjct: 121 LDYTKVSGSGLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLRQLDLRETSVTDAGLK 180
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI-GDDSVEMVACVGAN 118
E ++T +L V+ L LT+ L+ L LS + I GD E+ +
Sbjct: 181 EIAPLSELKTLMLVNAPVTGPGLKDLALLTK---LQFLFLSGTRITGDGLSELTGL--KS 235
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
LR L L T + AG+ LAG L L LS T++ + ++ + L +D+ +T I
Sbjct: 236 LRLLELGGTPLTDAGLKQLAG-FDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKI 294
Query: 179 K-GFIQQVGAETDLV-----------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
++++ A T+L + L L L RLNL T+V++A L+TFK
Sbjct: 295 TDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNLTHTKVTNACAKTLATFK 354
Query: 227 ELIHLSLRNASLTDVSLHQLSS 248
L + L +T+ +L +
Sbjct: 355 HLTSVDLHQTDVTEEGGKELKA 376
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
GA+T L L L LNL TQV+DA L ++ F +L L++ +TD L +
Sbjct: 50 GAKTFTDAGLKELSLFAGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYTQITDEGLRE 109
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 294
++ L++LT+L + ++ SGL L+ L L G + DA L+
Sbjct: 110 IAGLTELTDLVLDYTKVSGSGLKHLAALTKLRTLSL--GSKIVTDAGLR 156
>gi|383455271|ref|YP_005369260.1| hypothetical protein COCOR_03284 [Corallococcus coralloides DSM
2259]
gi|380733131|gb|AFE09133.1| leucine-rich repeat-containing protein [Corallococcus coralloides
DSM 2259]
Length = 614
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 43/319 (13%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+ L + LE L+LS+ T+D + + L + ++GT N L L
Sbjct: 217 GLGLLAAQTELEWLDLSDTTVDDTVLASLPGERLRTLVMSGTHVTNAGLGALR-RMPALR 275
Query: 74 FLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+L ++ +S+S L ++ L+ L L S+ + D + +A + A LR L LS TR
Sbjct: 276 WLGLARTSVSDAGLAHLGALRMLDALHLGSTGVTDAGLIHLARLPA-LRVLVLSKTRIRG 334
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----------F 181
GV LAG L LE+L L T I + A+ ++ + L+ +++S T + G
Sbjct: 335 PGVRHLAG-LTQLEVLHLDDTSIGNAALRHLQGLQHLRDLELSRTAVTGSGLPALSGLQA 393
Query: 182 IQQVGAETDLVL---SLTALQNLNHLERLNLEQTQVS----------------------- 215
++ +G + L L SL AL+ L L RL+L T++
Sbjct: 394 LESLGL-SGLALEDASLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLRHLDLSRTDF 452
Query: 216 -DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 274
D + L TF +L L LTD+ L QLS L +L +L + ++ SGL +
Sbjct: 453 NDGWVATLQTFTQLQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGSGLVPLQKLP 512
Query: 275 SLKLLDLHGGWLLTEDAIL 293
L LDL G W+ + A L
Sbjct: 513 HLVKLDLGGTWMTDDGARL 531
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 55/292 (18%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
P L +L LA T V+ ++ L L + +D++ G+ ++ AG +
Sbjct: 271 MPALRWLGLARTSVSD-AGLAHLGALRM----LDALHLGSTG------VTDAGLIHLARL 319
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
A + +LS + + LTQ++ L HLD +S IG+ ++ + + +LR+
Sbjct: 320 PALRVL---VLSKTRIRGPGVRHLAGLTQLEVL-HLDDTS--IGNAALRHLQGL-QHLRD 372
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK-- 179
L LS T + +G+ L+G L LE L LSG ++D +++ + + L +D+S T I
Sbjct: 373 LELSRTAVTGSGLPALSG-LQALESLGLSGLALEDASLAALEPLERLSRLDLSATRIGPE 431
Query: 180 -----------------------GFIQQVGAETDLV-----------LSLTALQNLNHLE 205
G++ + T L L L L L LE
Sbjct: 432 ALKQLGSRMVLRHLDLSRTDFNDGWVATLQTFTQLQSLRAIRTILTDLGLGQLSELRELE 491
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L + +S + L PL L+ L L +TD L+ KL+ LS+
Sbjct: 492 SLQVSGNPISGSGLVPLQKLPHLVKLDLGGTWMTDDGARLLAGFEKLSWLSL 543
>gi|449436168|ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
gi|449509305|ref|XP_004163550.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
Length = 578
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 19/277 (6%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + LE LN+ NC DS ++ L + ++ + + A+L
Sbjct: 222 GLVHLQGLRKLESLNIKWCNCITDSDIKPLSGLTNLKGLQISCSKVTDAGIAYLK-GLHK 280
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
LS L++ ++ C L+ + AL++L+LS I DD E + +GA L+ LNL
Sbjct: 281 LSLLNLEGCPVTAACLYTLSALGALQYLNLSRCHITDDGSEQFSGLGA-LKILNLGFNDI 339
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ + L G L NLE L+L +I+D + + + LK +++S+TD VG+
Sbjct: 340 TDECLVHLKG-LTNLESLNLDSCRIEDDGLVNLKALHRLKCLELSDTD-------VGSN- 390
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L +LE+LNL T V+D L LS L L+L +TD+ L L+ L
Sbjct: 391 ----GLRHLSGLFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQITDIGLASLTGL 446
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
LT+L + A +T+SG + ++L+ L++ GG L
Sbjct: 447 VGLTHLDLFGARITDSGTNYLRNFKNLQSLEICGGGL 483
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 46/298 (15%)
Query: 4 RLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
+LS LNL VT L + +L+ LNLS C I +G+E + L + +
Sbjct: 280 KLSLLNLEGCPVTAACLYTLSALGALQYLNLSRCHITD--DGSEQFSGLGALKILN---- 333
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
L F D+++ L LT LE L+L S I DD + + +
Sbjct: 334 -------------LGFNDITDECLVHLKGLTN---LESLNLDSCRIEDDGLVNLKAL-HR 376
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM--------MPSLKF 170
L+ L LS+T S G+ L+G L NLE L+LS T + D + +S + + +
Sbjct: 377 LKCLELSDTDVGSNGLRHLSG-LFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQI 435
Query: 171 IDISNTDIKGFI-----QQVGAE-TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
DI + G + GA TD L+N +L+ L + ++DA + +
Sbjct: 436 TDIGLASLTGLVGLTHLDLFGARITDS--GTNYLRNFKNLQSLEICGGGLTDAGVKNIKD 493
Query: 225 FKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L+ L+L +N +LTD SL +S L+ L +L+I ++ +T++GL K ++LK L L
Sbjct: 494 LSSLMVLNLSQNGNLTDKSLELISGLTGLVSLNISNSRITSAGLRHLKTLKNLKQLTL 551
>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 48 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIG 105
++I G FI+E + L+ LD+ + + ++++MK L L++ ++ IG
Sbjct: 36 SRIGAEGAKFISEMKQ--------LTSLDIGGNEIGDEGSKYISEMKQLTSLNIDNNRIG 87
Query: 106 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 165
D+ + ++ + L +L+++N G ++ + L L +SG I D + ++S M
Sbjct: 88 DEGAKSISEM-KQLTSLSINNNEIGVEGAKSIS-EMKQLTSLDISGNGIGDKGVKFISEM 145
Query: 166 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
LK +DI +I G E +S + L LN+ + ++ D + +S
Sbjct: 146 KQLKLLDIGGNEI-------GDEGSKYIS-----EMKQLTSLNIGENRIGDEGVKSISEM 193
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 285
K+L LS+ N + D +S + +LT+L I + + G+ S + L LD+ G
Sbjct: 194 KQLTSLSIYNNRIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNG 253
Query: 286 LLTEDA 291
+ E A
Sbjct: 254 IGDEGA 259
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 24/187 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++MK L LD+S + IGD V+ ++ + L +L++S G ++ + L++L
Sbjct: 214 ISEMKQLTSLDISGNGIGDKGVKSISEM-KQLTSLDISGNGIGDEGAKFIS-EMKQLKLL 271
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KG---------------FIQQVGAETD 190
+ G +I D Y+S M L ++I N +I +G + Q+G E
Sbjct: 272 DIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVE-- 329
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+ ++ + L+ LN+ ++ D + +S K+LI L++ + D + +S +
Sbjct: 330 ---GVKSISEMKQLKSLNICYNEIGDKGVKFISEMKQLISLNIGGNGIGDEGVKSISEMK 386
Query: 251 KLTNLSI 257
+LT+L+I
Sbjct: 387 QLTSLNI 393
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 50 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDD 107
I G FI+E + L LD+ + + ++++MK L L++ + IGD+
Sbjct: 134 IGDKGVKFISEMKQ--------LKLLDIGGNEIGDEGSKYISEMKQLTSLNIGENRIGDE 185
Query: 108 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
V+ ++ + L +L++ N R G ++ + L L +SG I D + +S M
Sbjct: 186 GVKSISEM-KQLTSLSIYNNRIGDEGAKSIS-EMKQLTSLDISGNGIGDKGVKSISEMKQ 243
Query: 168 LKFIDISNT-------------------DIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +DIS DI G ++G E +S + L LN
Sbjct: 244 LTSLDISGNGIGDEGAKFISEMKQLKLLDIGG--NEIGDEGSKYIS-----EMKQLTSLN 296
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
+ ++ + +S K+L L + N + + +S + +L +L+I + + G+
Sbjct: 297 IYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVEGVKSISEMKQLKSLNICYNEIGDKGVK 356
Query: 269 SFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+ L L++ GG + ++ + +M
Sbjct: 357 FISEMKQLISLNI-GGNGIGDEGVKSISEMKQ 387
>gi|290977840|ref|XP_002671645.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
gi|284085215|gb|EFC38901.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
Length = 392
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GI-LAGHLPNL 144
+L++MK L +LD+S + IG+D + + C G +R L N ++ GV G+ G L L
Sbjct: 150 YLSKMKQLTYLDISHNKIGEDGSKFI-CNG--IRQLTHLNIYYNEIGVRGVKFIGALKQL 206
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
L++ G +I D I ++ M L ++ISN +I+ GA+ LV +T L NLN
Sbjct: 207 TSLNVGGNRIGDQGIEHLMRMHQLVDLNISNNNIR----VEGAK--LVSEMTQLTNLN-- 258
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ + + D +S K+LI L + L++ +S + LTNL IR +
Sbjct: 259 ----IRKNIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNIRE 314
Query: 265 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
G + L L+L+G + +T++ I C ++
Sbjct: 315 EGAEFIGEMKQLTNLNLNGNY-ITDEGIKHLCGLYQ 349
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
A + L +L++ GV ++ +L L L++S +I Y+S M L ++D
Sbjct: 103 AMMKNRLVDLDMKMNNIGDIGVSYIS-NLTKLTKLNVSYNRISSEGAKYLSKMKQLTYLD 161
Query: 173 ISNTDI-----KGFIQQVGAETDL--------VLSLTALQNLNHLERLNLEQTQVSDATL 219
IS+ I K + T L V + + L L LN+ ++ D +
Sbjct: 162 ISHNKIGEDGSKFICNGIRQLTHLNIYYNEIGVRGVKFIGALKQLTSLNVGGNRIGDQGI 221
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L +L+ L++ N ++ +S +++LTNL+IR ++ + G + L L
Sbjct: 222 EHLMRMHQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISEMKQLIKL 281
Query: 280 DLHGGWLLTEDA 291
D+ +L A
Sbjct: 282 DIGKNYLSNRGA 293
>gi|356562920|ref|XP_003549716.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 580
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 19/295 (6%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G L + LE LN+ C +DS ++ L ++ ++ ++ + +L +
Sbjct: 224 GFVHLKGLKKLEYLNIGCCKCVMDSDMKSISELINLKELQISNSSITDIGITYLR-GLKM 282
Query: 72 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L+V +++ C F+ + +L L+L+ + DD E ++ + NL+ L+L+ R
Sbjct: 283 LTTLNVEGCNITAACLEFIHALASLACLNLNRCGLSDDGFEKISGL-KNLKRLSLAFNRI 341
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV 185
+ A + L G L NLE L+L +I D ++ ++ + LK + +S+TDI I +
Sbjct: 342 TDACLVHLKG-LTNLEYLNLDYCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRHISGL 400
Query: 186 GAETDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
DL LS T L L L+ LNL+ Q++DA L L++ LI L L A
Sbjct: 401 KKLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLIALDLFGAR 460
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
++D L S L +L I LT++G+ + + SL L+L LT+ +
Sbjct: 461 ISDNGTTFLRSFKILQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLTDKTL 515
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 64/285 (22%)
Query: 2 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
L L+LA+ +T L +++LE LNL C I G++ A L ++L
Sbjct: 328 LKNLKRLSLAFNRITDACLVHLKGLTNLEYLNLDYCRI-----GDDGLANLTGLTL---- 378
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+++ +LS D+ NS L ++ +K LE L+LS + + D ++ ++ +
Sbjct: 379 ----------LKSLVLSDTDIGNSGLRH---ISGLKKLEDLNLSFTTVTDHGLKRLSGL- 424
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
L++LNL + + AG+ L L L L L G +I D +++ L+ ++I
Sbjct: 425 TQLKSLNLDARQITDAGLANLTS-LSGLIALDLFGARISDNGTTFLRSFKILQSLEICG- 482
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
G + G + ++ + L +LNL Q N
Sbjct: 483 ---GGLTDAGVKN--------IREIVSLTQLNLSQ-----------------------NC 508
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+LTD +L +S ++ L +L++ ++ +TN GL KP ++L+ L L
Sbjct: 509 NLTDKTLELISGMTALRSLNVSNSRITNEGLRYLKPLKNLRTLTL 553
>gi|325110089|ref|YP_004271157.1| hypothetical protein Plabr_3538 [Planctomyces brasiliensis DSM
5305]
gi|324970357|gb|ADY61135.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 451
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 20/271 (7%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
L F N++ G+ L + S+ + L I EG + A + I G N
Sbjct: 186 LRFTNISDEGLPALAELDSISTVKLDRTKISD--EGVKTLAAIPTIRGLGLNLTNLTNTA 243
Query: 65 LYI--ETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
L E S L L++ ++ + + L M L++L L +GD+ E++ + +L+
Sbjct: 244 LEALKERSELVTLEMDDTQIDDAGIVHLEGMSNLQNLSLRRDDVGDEGFEIIGKL-KSLK 302
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L++ +T S AG LA +L NLE L L+ T I D ++++ + +LK +++ T I
Sbjct: 303 RLSIRDTVISDAGCAHLA-NLENLETLDLNETFIGDEGVAHLGGLKNLKTLELWFTRIT- 360
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
LQNL L LNLE T++ D+ L PL+ EL L+L+ +TD
Sbjct: 361 -----------PQGTAPLQNLTALRELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITD 409
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
L L L L + + + +++ G + K
Sbjct: 410 EGLVHLHGLKNLEFVHLGNTQVSDEGTDALK 440
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 106 DDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
D S E + +G LR L+L T S G+ LA L ++ + L T+I D + ++
Sbjct: 166 DVSDEGLKALGGLDKLRELDLRFTNISDEGLPALA-ELDSISTVKLDRTKISDEGVKTLA 224
Query: 164 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 223
+P+++ + ++ T++ +L AL+ + L L ++ TQ+ DA + L
Sbjct: 225 AIPTIRGLGLNLTNLTNT------------ALEALKERSELVTLEMDDTQIDDAGIVHLE 272
Query: 224 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L +LSLR + D + L L LSIRD V++++G +L+ LDL+
Sbjct: 273 GMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLANLENLETLDLNE 332
Query: 284 GWLLTED-AILQFCKMHPRIEVW 305
++ E A L K +E+W
Sbjct: 333 TFIGDEGVAHLGGLKNLKTLELW 355
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 156
+D S DD++ + ++ L L F+SAG+ L G L +L +LSL T IDD
Sbjct: 88 VDFRSVEAADDALTHLTGT-PQVQELYLFGPGFTSAGMSDLQG-LNDLRLLSLEKTLIDD 145
Query: 157 YAISYMSMMPSLKFIDISNTDIKG-FIQQVGA-----ETDLVLS------LTALQNLNHL 204
+ + +PSL + + TD+ ++ +G E DL + L AL L+ +
Sbjct: 146 AGLVEIGRIPSLVALRLRQTDVSDEGLKALGGLDKLRELDLRFTNISDEGLPALAELDSI 205
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ L++T++SD + L+ + L L +LT+ +L L S+L L + D + +
Sbjct: 206 STVKLDRTKISDEGVKTLAAIPTIRGLGLNLTNLTNTALEALKERSELVTLEMDDTQIDD 265
Query: 265 SGL 267
+G+
Sbjct: 266 AGI 268
>gi|116310796|emb|CAH67587.1| OSIGBa0112M24.4 [Oryza sativa Indica Group]
gi|218195159|gb|EEC77586.1| hypothetical protein OsI_16540 [Oryza sativa Indica Group]
Length = 581
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 43/306 (14%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER- 61
+LS ++ GV+ L +S L LNL C + + LE A L ++L+ +E
Sbjct: 264 QLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGC 323
Query: 62 ---EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
E + ++ L F ++++ L L ++ LE L+L S IGD+ + + +
Sbjct: 324 EHLEGLVKLKVLNLGFNYITDACLVH---LKELINLECLNLDSCKIGDEGLAHLKGL-LK 379
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
LR+L LS+T S G+ L+G L NL+ ++LS T + D + +S + SL+ +++ N I
Sbjct: 380 LRSLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQI 438
Query: 179 KGFIQQVGAETDLVLS-LTALQNLNHLERL----------------NLEQTQV-----SD 216
TD L+ LT L L HL+ NL+ +V +D
Sbjct: 439 ----------TDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITD 488
Query: 217 ATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
A + + K L L+L +N +LTD SL +S L+ L +L++ ++ ++NSGL KP ++
Sbjct: 489 AGVKNIKDLKALTLLNLSQNGNLTDKSLELISGLTALVSLNVSNSRVSNSGLHHLKPLQN 548
Query: 276 LKLLDL 281
L+ L L
Sbjct: 549 LRSLSL 554
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 4 RLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKI-------- 50
+L LNL + +T L + +LECLNL +C I G+E A L +
Sbjct: 331 KLKVLNLGFNYITDACLVHLKELINLECLNLDSCKI-----GDEGLAHLKGLLKLRSLEL 385
Query: 51 --SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 108
+ G+ + +++ LSF V++ L + ++ + +L L+L + I D+
Sbjct: 386 SDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKK---ISGLNSLRSLNLDNRQITDNG 442
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
+ + C+ L +L+L R + AG L + NL+ L + G I D + + + +L
Sbjct: 443 LAALTCL-TGLTHLDLFGARITDAGTNCLK-YFKNLQSLEVCGGLITDAGVKNIKDLKAL 500
Query: 169 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
+++S Q G TD L L + L L LN+ ++VS++ L L + L
Sbjct: 501 TLLNLS---------QNGNLTDKSLEL--ISGLTALVSLNVSNSRVSNSGLHHLKPLQNL 549
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 258
LSL + +T + + +L L+ L NL S+R
Sbjct: 550 RSLSLESCKVTAIEIKKL-QLAALPNLVSVR 579
>gi|168698219|ref|ZP_02730496.1| hypothetical protein GobsU_01767 [Gemmata obscuriglobus UQM 2246]
Length = 380
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS V+N+ L L K+L L L + I D ++ +A + NL NLSNT+ +
Sbjct: 79 LSHTGVTNAGLK---VLVAFKSLTTLSLHDTGITDAGLKELAPL-KNLTAFNLSNTKVTD 134
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G+ L + NL L L T+I D + + M L +D+S+T + TD
Sbjct: 135 TGLKELTA-IRNLTALHLRKTEITDAGLKSLPPMKDLTTLDLSDTKV----------TDA 183
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
L AL L L L L T+V+D L L+ K L L L N +TD L +L+ L
Sbjct: 184 --GLKALAPLERLTNLYLYNTEVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKS 241
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L+ L + + +T++GL P ++L L+L+G
Sbjct: 242 LSVLVLGETEVTDAGLKELAPLKNLTALNLYG 273
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 138/314 (43%), Gaps = 42/314 (13%)
Query: 2 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
F L+ L+L TG+T +L + +L NLSN + T
Sbjct: 95 FKSLTTLSLHDTGITDAGLKELAPLKNLTAFNLSNTKVTD-------------------T 135
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E A + L +++++ L L MK L LDLS + + D ++ +A +
Sbjct: 136 GLKELTAIRNLTALHLRKTEITDAGLKS---LPPMKDLTTLDLSDTKVTDAGLKALAPL- 191
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
L NL L NT + G+ LA NL +L L T++ D + ++ + SL + + T
Sbjct: 192 ERLTNLYLYNTEVTDTGLKELAPS-KNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGET 250
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ TD L L L +L LNL T+V+DA + L+ F+ L L L
Sbjct: 251 EV----------TDA--GLKELAPLKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGT 298
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 296
++TD + +L+ L +L + +T+ GL + L L L T I +F
Sbjct: 299 NVTDAGIKELARFKNLAHLELSSTAVTDVGLKELASLKKLTKLFLISTK-TTFAGIKEFQ 357
Query: 297 KMHPRIEVWHELSV 310
K P+ +VW+ LS+
Sbjct: 358 KAAPKCDVWNTLSL 371
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 15/166 (9%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+L +++LS+T ++AG+ +L +L LSL T I D + ++ + +L ++SNT
Sbjct: 73 SLTSIDLSHTGVTNAGLKVLVA-FKSLTTLSLHDTGITDAGLKELAPLKNLTAFNLSNTK 131
Query: 178 IKGFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ TD L LTA++NL L +L +T+++DA L L K+L L L +
Sbjct: 132 V----------TDTGLKELTAIRNLTAL---HLRKTEITDAGLKSLPPMKDLTTLDLSDT 178
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+TD L L+ L +LTNL + + +T++GL P ++L +L L+
Sbjct: 179 KVTDAGLKALAPLERLTNLYLYNTEVTDTGLKELAPSKNLAVLLLY 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 106 DDSVEMVACV-GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
D +V+ V V G LR+ N T GV + AG + G ++ D + +
Sbjct: 24 DAAVKAVEKVYGKVLRDANQVIT-----GVDLSAG--------AAQGHRVTDEELKELLP 70
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
+ SL ID+S+T + L L L L+L T ++DA L L+
Sbjct: 71 LKSLTSIDLSHTGVTNA------------GLKVLVAFKSLTTLSLHDTGITDAGLKELAP 118
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
K L +L N +TD L +L+++ LT L +R +T++GL S P + L LDL
Sbjct: 119 LKNLTAFNLSNTKVTDTGLKELTAIRNLTALHLRKTEITDAGLKSLPPMKDLTTLDL 175
>gi|226501144|ref|NP_001141453.1| uncharacterized protein LOC100273563 [Zea mays]
gi|194704638|gb|ACF86403.1| unknown [Zea mays]
gi|414586493|tpg|DAA37064.1| TPA: regulatory subunit [Zea mays]
Length = 581
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 60/306 (19%)
Query: 4 RLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
+L LNL VT + ++SL LNLS C I EG EN L K+ F
Sbjct: 283 KLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLGFN 340
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+A L L + LE L+L S IGD+ + + +
Sbjct: 341 QITDACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL-IQ 379
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L+NL LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N I
Sbjct: 380 LKNLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI 438
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ---------------------VSDA 217
+T L SLT L L HL+ T ++DA
Sbjct: 439 --------TDTGLA-SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDA 489
Query: 218 TLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
+ + K L L+L +N LTD +L +S L+ L +L++ ++ ++NSGL KP ++L
Sbjct: 490 GVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNL 549
Query: 277 KLLDLH 282
+ L L
Sbjct: 550 RSLSLE 555
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 17/223 (7%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L L++ +++ C ++++ +L L+LS I D+ E + + L+ L+L +
Sbjct: 284 LGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGL-TKLKALSLGFNQI 342
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + I L NLE L+L +I D + ++ + LK +++S+T +VG+
Sbjct: 343 TDACL-IHLKDLVNLECLNLDSCKIGDEGLFHLKGLIQLKNLELSDT-------EVGSN- 393
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L +L+ +NL T V+D L +S L L+L N +TD L L+ L
Sbjct: 394 ----GLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTGL 449
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+ LT+L + A +T+SG+ F+ ++++ L++ GG L+T+ +
Sbjct: 450 TGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGG-LITDAGV 491
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 46/265 (17%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L L+L + +T L ++ +LECLNL +C I G+E L
Sbjct: 329 LTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKI-----GDEGLFHL--------- 374
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + ++ LS +V ++ L L+ ++ L+ ++LS +++ D ++ ++ +
Sbjct: 375 -----KGLIQLKNLELSDTEVGSNGLRH---LSGLRNLQSINLSFTLVTDIGLKKISGL- 425
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
++L++LNL N + + G+ L G L L L L G +I D +S +++ +++
Sbjct: 426 SSLKSLNLDNRQITDTGLASLTG-LTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGG 484
Query: 176 ----------TDIKGF----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 221
D+K + Q G TD L L + L L LN+ ++VS++ L
Sbjct: 485 LITDAGVKNIKDLKALTLLNLSQNGKLTDKTLEL--ISGLTALVSLNVSNSRVSNSGLHH 542
Query: 222 LSTFKELIHLSLRNASLTDVSLHQL 246
L + L LSL + +T + +L
Sbjct: 543 LKPLQNLRSLSLESCRVTASEMDKL 567
>gi|115459280|ref|NP_001053240.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|113564811|dbj|BAF15154.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|215678755|dbj|BAG95192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708842|dbj|BAG94111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629150|gb|EEE61282.1| hypothetical protein OsJ_15365 [Oryza sativa Japonica Group]
Length = 581
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 43/306 (14%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER- 61
+LS ++ GV+ L +S L LNL C + + LE A L ++L+ +E
Sbjct: 264 QLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGC 323
Query: 62 ---EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
E + ++ L F ++++ L L ++ LE L+L S IGD+ + + +
Sbjct: 324 EHLEGLVKLKVLNLGFNYITDACLVH---LKELINLECLNLDSCKIGDEGLAHLKGL-LK 379
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
LR+L LS+T S G+ L+G L NL+ ++LS T + D + +S + SL+ +++ N I
Sbjct: 380 LRSLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQI 438
Query: 179 KGFIQQVGAETDLVLS-LTALQNLNHLERL----------------NLEQTQV-----SD 216
TD L+ LT L L HL+ NL+ +V +D
Sbjct: 439 ----------TDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITD 488
Query: 217 ATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
A + + K L L+L +N +LTD SL +S L+ L +L++ ++ ++NSGL KP ++
Sbjct: 489 AGVKNIKDLKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLKPLQN 548
Query: 276 LKLLDL 281
L+ L L
Sbjct: 549 LRSLSL 554
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 4 RLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKI-------- 50
+L LNL + +T L + +LECLNL +C I G+E A L +
Sbjct: 331 KLKVLNLGFNYITDACLVHLKELINLECLNLDSCKI-----GDEGLAHLKGLLKLRSLEL 385
Query: 51 --SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 108
+ G+ + +++ LSF V++ L + ++ + +L L+L + I D+
Sbjct: 386 SDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKK---ISGLNSLRSLNLDNRQITDNG 442
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
+ + C+ L +L+L R + AG L + NL+ L + G I D + + + +L
Sbjct: 443 LAALTCL-TGLTHLDLFGARITDAGTNCLK-YFKNLQSLEVCGGLITDAGVKNIKDLKAL 500
Query: 169 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
+++S Q G TD L L + L L LN+ ++VS++ L L + L
Sbjct: 501 TLLNLS---------QNGNLTDKSLEL--ISRLTALVSLNVSNSRVSNSGLHHLKPLQNL 549
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 258
LSL + +T + + +L L+ L NL S+R
Sbjct: 550 RSLSLESCKVTAIEIKKL-QLAALPNLVSVR 579
>gi|357468127|ref|XP_003604348.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355505403|gb|AES86545.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 573
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 47/309 (15%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPL-------AKISLAGTTFIN--ERE 62
G L ++ LE LN+ NC DS ++ A L +K++ G +F+ ++
Sbjct: 217 GTVHLQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKL 276
Query: 63 AFLYIETSL-------------------LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 103
A L +E L L+ ++S+ RF ++++ L+ L+L +
Sbjct: 277 ALLNLEGCLVTSACLDSLSELPALSNLNLNRCNISDRGCERF---SRLEKLKVLNLGFND 333
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
IGD + + + L +LNL + + G+ LAGH L L LS T++ ++ + ++S
Sbjct: 334 IGDRCLAHMKGL-TKLESLNLDSCKIGDEGLENLAGH-KQLICLELSDTEVGNHGLEHLS 391
Query: 164 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 223
+ SL+ I++S T + G L L L+ L+ LNL+ Q++DA L L+
Sbjct: 392 GLSSLEKINLSFT----VVSDSG--------LRKLCGLSSLKSLNLDAYQITDAGLATLT 439
Query: 224 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ L L L A +TDV + L L +L I LT++G+ + K SL L+L
Sbjct: 440 SLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQ 499
Query: 284 GWLLTEDAI 292
LT+ +
Sbjct: 500 NSNLTDKTV 508
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 2 FPRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNL + + + ++ LE LNL +C I EG EN LAG
Sbjct: 321 LEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGD--EGLEN--------LAG-- 368
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + +E LS +V N L L+ + +LE ++LS +++ D + + C
Sbjct: 369 ----HKQLICLE---LSDTEVGNHGLEH---LSGLSSLEKINLSFTVVSDSGLRKL-CGL 417
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
++L++LNL + + AG+ L L L L L G +I D +Y+ +L+ ++I +
Sbjct: 418 SSLKSLNLDAYQITDAGLATLT-SLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICS- 475
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 235
G + G + ++ L+ L LNL Q + ++D T+ ++ L+ L+L N
Sbjct: 476 ---GGLTDAGVKN--------IKELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSN 524
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+T L L +L L +L++ +T + + FK
Sbjct: 525 TRITSAGLQHLKTLKNLRSLTLESCKVTANDIKKFK 560
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 146/303 (48%), Gaps = 22/303 (7%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLL 72
G++ L + L LNL C + S + ++ P L+ ++L I++R + L
Sbjct: 266 GISFLRGLQKLALLNLEGCLVTSACLDSLSELPALSNLNLNRCN-ISDRGCERFSRLEKL 324
Query: 73 SFLDVSNSSLSRFCFLTQMKAL---EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L++ + + C L MK L E L+L S IGD+ +E +A L L LS+T
Sbjct: 325 KVLNLGFNDIGDRC-LAHMKGLTKLESLNLDSCKIGDEGLENLA-GHKQLICLELSDTEV 382
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQV 185
+ G+ L+G L +LE ++LS T + D + + + SLK +++ I + +
Sbjct: 383 GNHGLEHLSG-LSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSL 441
Query: 186 GAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNA 236
TDL L L+ +L L + ++DA + + L+ L+L +N+
Sbjct: 442 TGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNS 501
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 296
+LTD ++ ++ L+ L +L++ + +T++GL K ++L+ L L +T + I +F
Sbjct: 502 NLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLE-SCKVTANDIKKFK 560
Query: 297 KMH 299
+H
Sbjct: 561 LIH 563
>gi|356548547|ref|XP_003542662.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 578
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 33/302 (10%)
Query: 14 GVTKLPNISSLECLNLSNC---------TIDSILEGNENKAPLAKISLAGTTFINEREAF 64
G L + LE LN+ C +I ++ E + + I+ G T++ E
Sbjct: 222 GFVHLKGLKKLEYLNIGCCKCVTDSDIKSISELINLKELQISNSSITDIGITYLRGLEK- 280
Query: 65 LYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
L+ L+V +++ C F+ + +L L+L+ + DD E ++ + NL+ L
Sbjct: 281 -------LTTLNVEGCNITAACLEFIHALTSLACLNLNRCGLSDDGFEKISGL-KNLKRL 332
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-- 180
+L+ R + A + + L NLE L+L +I D ++ ++ + LK + +S+TDI
Sbjct: 333 SLAFNRITDACL-VHLKDLTNLEYLNLDSCRIGDGGLANLTGLTLLKSLVLSDTDIGNSG 391
Query: 181 --FIQQVGAETDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 230
+I + DL +S T L L L+ LNL+ Q++DA L L++ LI
Sbjct: 392 LRYISGLKKLEDLNVSFTTVTDNGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLIT 451
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
L L A ++D L S L +L I LT++G+ + + SL L+L LT+
Sbjct: 452 LDLFGARISDNGTTFLRSFKNLQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLTDK 511
Query: 291 AI 292
+
Sbjct: 512 TL 513
>gi|359484681|ref|XP_002262830.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Vitis vinifera]
gi|296084545|emb|CBI25566.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 19/295 (6%)
Query: 14 GVTKLPNISSLECLNL--SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L ++ LE LN+ C DS L+ L ++ ++ + + ++L L
Sbjct: 222 GLIHLKGLTKLESLNIRYCKCITDSDLKALSGLTSLKELQMSCSNITDIGISYLKGLCKL 281
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
+ LDV ++ C L+ + AL +L+L+ + D E + + NL+ LN+
Sbjct: 282 M-LLDVEGCHVTTSCLDSLSALVALSYLNLNRCGLSDVGCEKFSGL-KNLKVLNMGFNNI 339
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGA 187
+ A + L G L NLE L+L I+D ++ ++ + LK +++S+T + G G
Sbjct: 340 TDACLVHLKG-LTNLESLNLDSCSIEDEGLANLTGLSLLKCLELSDTKVGSNGLCHLSGL 398
Query: 188 ET--DLVLSLT--------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
L LS T L L L+ LNL+ Q++DA L +++ L HL L A
Sbjct: 399 TKLESLNLSFTLVTDSGLKKLCGLTSLKSLNLDARQITDAGLAAITSLTGLTHLDLFGAR 458
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
++D + L L L I LT++G+ + K SL LL+L LT+ +
Sbjct: 459 ISDAGTNCLRHFKNLQTLEICGGGLTDAGVKNIKGLASLTLLNLSQNCNLTDKTL 513
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 36/262 (13%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISL---- 52
L LN+ + +T L +++LE LNL +C+I+ +E A L +SL
Sbjct: 326 LKNLKVLNMGFNNITDACLVHLKGLTNLESLNLDSCSIE-----DEGLANLTGLSLLKCL 380
Query: 53 ------AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 106
G+ + +E+ LSF V++S L + C LT +K+L +L + I D
Sbjct: 381 ELSDTKVGSNGLCHLSGLTKLESLNLSFTLVTDSGLKKLCGLTSLKSL---NLDARQITD 437
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ + + L +L+L R S AG L H NL+ L + G + D + + +
Sbjct: 438 AGLAAITSL-TGLTHLDLFGARISDAGTNCLR-HFKNLQTLEICGGGLTDAGVKNIKGLA 495
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
SL +++S Q TD L + + L L LN+ +++++ L L K
Sbjct: 496 SLTLLNLS---------QNCNLTDKTLEM--ISGLTALVSLNVSNSRITNNGLQHLKPLK 544
Query: 227 ELIHLSLRNASLTDVSLHQLSS 248
L+ LSL + +T + +L S
Sbjct: 545 NLLSLSLESCKVTASEIRKLQS 566
>gi|149176715|ref|ZP_01855326.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844356|gb|EDL58708.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 1266
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +K+LE+LDLS S I D + + L+ LNL +TR + AG+ L LP LE L
Sbjct: 497 LNDLKSLENLDLSRSGITDAGLVSLKKF-PQLKTLNLGSTRVTDAGLTHLKA-LPKLESL 554
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--------------------KGFIQQVGA 187
L T + +S + +P LK +D+S T + K I G
Sbjct: 555 KLYNTSVTGTGLSELVTLPKLKTLDLSLTPLTETGLQTVSKLIHLQSLSLTKTKINSAGV 614
Query: 188 E--------TDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+ T L L +L ++ L L LNL +T+++D + L K L L
Sbjct: 615 KHLVPLTELTTLKLDYTQIDDTALASIAKLTKLRSLNLRKTEITDTGMVHLENLKPLKVL 674
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
SL +++ L L SL +L L +R+ + ++GL + +LK LDL+G
Sbjct: 675 SLDETRVSNAGLKSLQSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSLDLYG 726
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 58/295 (19%)
Query: 4 RLSFLN--LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
+L F N ++ +G+ L N+ L+ L NC PL E
Sbjct: 84 KLGFYNVKISGSGLQSLTNLKHLQNLEFQNC-------------PL------------ED 118
Query: 62 EAFLYIET-SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+AF +++ L+ L V + L+ C L + LE L L ++ I D +E + +
Sbjct: 119 DAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLNNL-KE 177
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS-------------MM 165
L +LNL T+ S+AG+ L+ L L+ L ++ T++ ++ + ++
Sbjct: 178 LNSLNLYQTKISNAGLTHLS-ELKKLKQLEVNETKVTSAGVAELQEAIPECKILFDRPVL 236
Query: 166 PSLKFIDISNTDIKGFIQQVGAETDLVLS-------------LTALQNLNHLERLNLEQT 212
P+ + + GF++ + +LS L L+ L+ L+ L L QT
Sbjct: 237 PAHLKVARQVKSLGGFVRYQDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSLTLNQT 296
Query: 213 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
VSD L L+ K L L++ + +TD +L L+ LS+LT+L++ +T++G+
Sbjct: 297 SVSDQGLQILNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGM 351
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 84 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 143
R L +K L LD++ + + D ++ + V LR L L+ F+ G+ L L
Sbjct: 827 RLSLLNGLKTLYELDVAGADLTDAGLKHLKHV-PELRVLKLNGGNFTEEGLKQLT-QLKK 884
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLK-FIDISNTDIKGFIQQVGAETDL-VLSLTA---- 197
LE+L + I + + + M LK FI N + ++ + T+L VL+L+
Sbjct: 885 LEVLQIENAGITNDQLIQLKEMTQLKIFILPQNQITEHGLKHLSGLTNLKVLNLSQNRIY 944
Query: 198 ------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
L +L +L L LE T+V+D L L L L L ++TD L ++
Sbjct: 945 SDGMVHLASLENLRSLALEHTRVADQGLEDLLRLPRLNTLILDGTTITDGGTPLLRKMTS 1004
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 306
L LS+ +T+ GL + R L LDL+ ++ED + F + P+ + +
Sbjct: 1005 LGMLSLNSTYITDRGLKDLETLRGLYRLDLNDTK-VSEDGVKNFQRSQPKCNIEY 1058
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
H+P L+ +S T I D ++S + L+ + + T I TD L L
Sbjct: 451 HVPRLKSVSFISTSITDDCTRHLSGLSELETLQLPGTAI----------TDK--GLATLN 498
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
+L LE L+L ++ ++DA L L F +L L+L + +TD L L +L KL +L + +
Sbjct: 499 DLKSLENLDLSRSGITDAGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKALPKLESLKLYN 558
Query: 260 AVLTNSGLGSFKPPRSLKLLDL 281
+T +GL LK LDL
Sbjct: 559 TSVTGTGLSELVTLPKLKTLDL 580
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
RF A +G ++ +S + +I D I +++ + ++ + N I G
Sbjct: 46 RFGYAK----SGSKKKIDSVSFTNNKITDTQIKFINHLKDIRKLGFYNVKISGS------ 95
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L +L NL HL+ L + + D L F L HL +R+ LTD L L
Sbjct: 96 ------GLQSLTNLKHLQNLEFQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLK 149
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L++L L + +++SGL + L L+L+
Sbjct: 150 DLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLY 184
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 20/293 (6%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINERE 62
+L + + T + + ++ L LNL I D+ + EN PL +SL T N
Sbjct: 627 KLDYTQIDDTALASIAKLTKLRSLNLRKTEITDTGMVHLENLKPLKVLSLDETRVSNAGL 686
Query: 63 AFLYIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
L L L D+ ++ L + +K+L DL + + D +
Sbjct: 687 KSLQSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSL---DLYGTKVTDTGMAYFHDKLIK 743
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS-------LKFI 171
+LNL T + AGV +L PN I + +D S ++ + +
Sbjct: 744 PTDLNLHGTGVTEAGVAMLKQQCPNCRI--QASPPLDSGIQSILAKLKKSGGFYTRRRLP 801
Query: 172 DISNTDIKGFIQQVGAETDLV---LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
+ + + F G E L L+ L L L L++ ++DA L L EL
Sbjct: 802 ENAEQLVVRFYPLPGREKKLSPLDERLSLLNGLKTLYELDVAGADLTDAGLKHLKHVPEL 861
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L + T+ L QL+ L KL L I +A +TN L K LK+ L
Sbjct: 862 RVLKLNGGNFTEEGLKQLTQLKKLEVLQIENAGITNDQLIQLKEMTQLKIFIL 914
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 198 LQNLNHLERLN---LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+++L H+ RL T ++D LS EL L L ++TD L L+ L L N
Sbjct: 446 VKHLKHVPRLKSVSFISTSITDDCTRHLSGLSELETLQLPGTAITDKGLATLNDLKSLEN 505
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 303
L + + +T++GL S K LK L+L G DA L K P++E
Sbjct: 506 LDLSRSGITDAGLVSLKKFPQLKTLNL--GSTRVTDAGLTHLKALPKLE 552
>gi|406832962|ref|ZP_11092556.1| hypothetical protein SpalD1_15024 [Schlesneria paludicola DSM
18645]
Length = 236
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 83 SRF--CFLTQMKALEHL---DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 137
SRF FL +K L+ L DL + IGD ++ +A + NL L LSN + AG+ L
Sbjct: 58 SRFNGKFLHLVKGLDQLTSLDLRKTDIGDTHLKEIAEL-ENLTTLRLSNVPITDAGLIEL 116
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
L L L+GT+I D + +S+ SL+++D+S T I G + L
Sbjct: 117 RSQ-KKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITG------------MGLKD 163
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L L +L LNLE T+V+D L + FK LI ++LR S+TD
Sbjct: 164 LSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAG 208
>gi|388500850|gb|AFK38491.1| unknown [Medicago truncatula]
Length = 577
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 47/309 (15%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPL-------AKISLAGTTFIN--ERE 62
G L ++ LE LN+ NC DS ++ A L +K++ G +F+ ++
Sbjct: 221 GTVHLQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKL 280
Query: 63 AFLYIETSL-------------------LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 103
A L +E L L+ ++S RF ++++ L+ L+L +
Sbjct: 281 ALLNLEGCLVTSACLDSLSELPALSNLNLNRCNISGRGCERF---SRLEKLKVLNLGFND 337
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
IGD + + + L +LNL + + G+ LAGH L L LS T++ ++ + ++S
Sbjct: 338 IGDRCLAHMKGL-TKLESLNLDSCKIGDEGLENLAGH-KQLICLELSDTEVGNHGLEHLS 395
Query: 164 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 223
+ SL+ I++S T + G L L L+ L+ LNL+ Q++DA L L+
Sbjct: 396 GLSSLEKINLSFT----VVSDSG--------LRKLCGLSSLKSLNLDAYQITDAGLATLT 443
Query: 224 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ L L L A +TDV + L L L I LT++G+ + K SL L+L
Sbjct: 444 SLTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICSGGLTDAGVKNIKELSSLMCLNLSQ 503
Query: 284 GWLLTEDAI 292
LT+ +
Sbjct: 504 NSNLTDKTV 512
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 42/276 (15%)
Query: 2 FPRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNL + + + ++ LE LNL +C I EG EN LAG
Sbjct: 325 LEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGD--EGLEN--------LAG-- 372
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + +E LS +V N L L+ + +LE ++LS +++ D + + C
Sbjct: 373 ----HKQLICLE---LSDTEVGNHGLEH---LSGLSSLEKINLSFTVVSDSGLRKL-CGL 421
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
++L++LNL + + AG+ L L L L L G +I D +Y+ +L+ ++I +
Sbjct: 422 SSLKSLNLDAYQITDAGLATLT-SLTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICS- 479
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 235
G + G + ++ L+ L LNL Q + ++D T+ ++ L+ L+L N
Sbjct: 480 ---GGLTDAGVKN--------IKELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSN 528
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+T L L +L L L++ +T + + FK
Sbjct: 529 TRITFAGLQHLKTLKNLRFLTLESCKVTVNDIKKFK 564
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L+ LNL VT L + +L LNL+ C I G E + L K+ +
Sbjct: 277 LQKLALLNLEGCLVTSACLDSLSELPALSNLNLNRCNISG--RGCERFSRLEKLKVLN-- 332
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
L F D+ + L+ LT+ LE L+L S IGD+ +E +A
Sbjct: 333 ---------------LGFNDIGDRCLAHMKGLTK---LESLNLDSCKIGDEGLENLA-GH 373
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
L L LS+T + G+ L+G L +LE ++LS T + D + + + SLK +++
Sbjct: 374 KQLICLELSDTEVGNHGLEHLSG-LSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAY 432
Query: 177 DIK----GFIQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLST 224
I + + TDL L L+ +L L + ++DA + +
Sbjct: 433 QITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICSGGLTDAGVKNIKE 492
Query: 225 FKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L+ L+L +N++LTD ++ ++ L+ L +L++ + +T +GL K ++L+ L L
Sbjct: 493 LSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITFAGLQHLKTLKNLRFLTLES 552
Query: 284 GWLLTEDAILQFCKMH 299
+ D I +F +H
Sbjct: 553 CKVTVND-IKKFKLIH 567
>gi|168704615|ref|ZP_02736892.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 294
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 58 INEREAFLYIETSLLSFLD--VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 115
+ E AF ++ ++LS D VS++ L LT K L L LS + + D ++ VA +
Sbjct: 64 LKELAAFKHL--AVLSLYDTQVSDAGLKE---LTSSKGLTELLLSRTKVTDAGLKDVAKL 118
Query: 116 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 175
+L L L T + AG+G L L L L L GT+I D A ++ + L + +
Sbjct: 119 -THLEKLALDETAVTDAGIGELV-PLKRLSELWLMGTKITDAAFKNVAKLKGLTTLRLDG 176
Query: 176 TDIKGF-IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
I G ++QV A ++ L L T +S+A L ++ FK L L L
Sbjct: 177 AKITGVGLKQVAA-------------IDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLS 223
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+TD L +L++L KLT L + +T++G+ S + LK+L L
Sbjct: 224 ECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHL 270
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L L HL L+L TQVSDA L L++ K L L L +TD L ++ L+ L
Sbjct: 64 LKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGLKDVAKLTHLEK 123
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L++ + +T++G+G P + L L L G
Sbjct: 124 LALDETAVTDAGIGELVPLKRLSELWLMG 152
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L LE T+++DA L L+ FK L LSL + ++D L +L+S LT L + +T++
Sbjct: 51 ELWLEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDA 110
Query: 266 GL 267
GL
Sbjct: 111 GL 112
>gi|125540271|gb|EAY86666.1| hypothetical protein OsI_08050 [Oryza sativa Indica Group]
Length = 582
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 147/308 (47%), Gaps = 62/308 (20%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L+ LNL VT + ++SL LNLS C I EG EN L K+ +
Sbjct: 282 LSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYG--EGCENFQGLKKLKVLN-- 337
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
L F ++++ L+ L ++ LE L+L S +GD+ + +
Sbjct: 338 ---------------LGFNNITDDCLAH---LKELINLESLNLDSCKVGDEGLLHLR-GL 378
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
L++L LS+T S+G+ L+G L NLE ++LS T + D + +S + SLK +++ N
Sbjct: 379 MLLKSLELSDTEVGSSGLQHLSG-LRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNR 437
Query: 177 DIKGFIQQVGAETDLVLS-LTALQNLNHLERL----------------NLEQTQV----- 214
I TD+ L+ LT+L L HL+ NLE +V
Sbjct: 438 QI----------TDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGGLI 487
Query: 215 SDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+DA + + K L L+L +N +LTD +L +S L+ L +L++ + ++N+GL K
Sbjct: 488 TDAGVKNIKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRISNAGLRHLKDL 547
Query: 274 RSLKLLDL 281
++L+ L L
Sbjct: 548 QNLRSLSL 555
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + +LE LN+ C DS ++ + L ++ LA + ++L S
Sbjct: 226 GLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLR-GLSK 284
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ ++ C ++ + +L L+LS I + E L+ L + N F
Sbjct: 285 LTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQ----GLKKLKVLNLGF 340
Query: 130 SSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
++ LA L NLE L+L ++ D + ++ + LK +++S+T +VG+
Sbjct: 341 NNITDDCLAHLKELINLESLNLDSCKVGDEGLLHLRGLMLLKSLELSDT-------EVGS 393
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L L L +LE +NL T V+D + +S L ++L N +TDV L L+
Sbjct: 394 S-----GLQHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQITDVGLAALT 448
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
SL+ LT+L + A +T+ G F+ ++L+ L++ GG L+T+ +
Sbjct: 449 SLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGG-LITDAGV 492
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 54/271 (19%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNL + +T L + +LE LNL +C + G+E L + L +
Sbjct: 330 LKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKV-----GDEGLLHLRGLMLLKSL 384
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+++ E V +S L L+ ++ LE ++LS +++ D ++ ++ +
Sbjct: 385 ELSDTE--------------VGSSGLQH---LSGLRNLESINLSFTLVTDTGMKKISALN 427
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+ L+++NL N + + G+ L L L L L G +I DY S +L+ +++
Sbjct: 428 S-LKSVNLDNRQITDVGLAALT-SLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCG- 484
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLN-------------------HLERLNLEQTQVSDA 217
G I G + + L AL+ LN L LN+ T++S+A
Sbjct: 485 ---GLITDAGVKN--IKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRISNA 539
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L L + L LSL + +T + +L +
Sbjct: 540 GLRHLKDLQNLRSLSLDSCRVTTSEVKKLQA 570
>gi|115447277|ref|NP_001047418.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|47497632|dbj|BAD19701.1| leucine-rich repeat-like protein [Oryza sativa Japonica Group]
gi|113536949|dbj|BAF09332.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|125582867|gb|EAZ23798.1| hypothetical protein OsJ_07510 [Oryza sativa Japonica Group]
gi|215704406|dbj|BAG93840.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 582
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 147/308 (47%), Gaps = 62/308 (20%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L+ LNL VT + ++SL LNLS C I EG EN L K+ +
Sbjct: 282 LSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYG--EGCENFQGLKKLKVLN-- 337
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
L F ++++ L+ L ++ LE L+L S +GD+ + +
Sbjct: 338 ---------------LGFNNITDDCLAH---LKELINLESLNLDSCKVGDEGLLHLR-GL 378
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
L++L LS+T S+G+ L+G L NLE ++LS T + D + +S + SLK +++ N
Sbjct: 379 MLLKSLELSDTEVGSSGLQHLSG-LRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNR 437
Query: 177 DIKGFIQQVGAETDLVLS-LTALQNLNHLERL----------------NLEQTQV----- 214
I TD+ L+ LT+L L HL+ NLE +V
Sbjct: 438 QI----------TDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGGLI 487
Query: 215 SDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+DA + + K L L+L +N +LTD +L +S L+ L +L++ + ++N+GL K
Sbjct: 488 TDAGVKNIKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRVSNAGLRHLKDL 547
Query: 274 RSLKLLDL 281
++L+ L L
Sbjct: 548 QNLRSLSL 555
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + +LE LN+ C DS ++ + L ++ LA + ++L S
Sbjct: 226 GLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLR-GLSK 284
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ ++ C ++ + +L L+LS I + E L+ L + N F
Sbjct: 285 LTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQ----GLKKLKVLNLGF 340
Query: 130 SSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
++ LA L NLE L+L ++ D + ++ + LK +++S+T +VG+
Sbjct: 341 NNITDDCLAHLKELINLESLNLDSCKVGDEGLLHLRGLMLLKSLELSDT-------EVGS 393
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L L L +LE +NL T V+D + +S L ++L N +TDV L L+
Sbjct: 394 S-----GLQHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQITDVGLAALT 448
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
SL+ LT+L + A +T+ G F+ ++L+ L++ GG L+T+ +
Sbjct: 449 SLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGG-LITDAGV 492
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 54/271 (19%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNL + +T L + +LE LNL +C + G+E L + L +
Sbjct: 330 LKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKV-----GDEGLLHLRGLMLLKSL 384
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+++ E V +S L L+ ++ LE ++LS +++ D ++ ++ +
Sbjct: 385 ELSDTE--------------VGSSGLQH---LSGLRNLESINLSFTLVTDTGMKKISALN 427
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+ L+++NL N + + G+ L L L L L G +I DY S +L+ +++
Sbjct: 428 S-LKSVNLDNRQITDVGLAALT-SLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCG- 484
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLN-------------------HLERLNLEQTQVSDA 217
G I G + + L AL+ LN L LN+ T+VS+A
Sbjct: 485 ---GLITDAGVKN--IKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRVSNA 539
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L L + L LSL + +T + +L +
Sbjct: 540 GLRHLKDLQNLRSLSLDSCRVTTSEVKKLQA 570
>gi|357458869|ref|XP_003599715.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355488763|gb|AES69966.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 585
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 17/221 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ ++S+ RF ++++ L+ L+L + IGD + + + L +LNL + +
Sbjct: 317 LNRCNISDRGCERF---SRLEKLKVLNLGFNDIGDRCLAHMKGL-TKLESLNLDSCKIGD 372
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G+ LAGH L L LS T++ ++ + ++S + SL+ I++S T + G
Sbjct: 373 EGLENLAGH-KQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT----VVSDSG----- 422
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
L L L+ L+ LNL+ Q++DA L L++ L L L A +TDV + L
Sbjct: 423 ---LRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKN 479
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
L +L I LT++G+ + K SL L+L LT+ +
Sbjct: 480 LRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 520
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 2 FPRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNL + + + ++ LE LNL +C I EG EN LAG
Sbjct: 333 LEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGD--EGLEN--------LAG-- 380
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + +E LS +V N L L+ + +LE ++LS +++ D + + C
Sbjct: 381 ----HKQLICLE---LSDTEVGNHGLEH---LSGLSSLEKINLSFTVVSDSGLRKL-CGL 429
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
++L++LNL + + AG+ L L L L L G +I D +Y+ +L+ ++I +
Sbjct: 430 SSLKSLNLDAYQITDAGLATLTS-LTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICS- 487
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 235
G + G + ++ L+ L LNL Q + ++D T+ ++ L+ L+L N
Sbjct: 488 ---GGLTDAGVKN--------IKELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSN 536
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+T L L +L L +L++ +T + + FK
Sbjct: 537 TRITSAGLQHLKTLKNLRSLTLESCKVTANDIKKFK 572
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 38/295 (12%)
Query: 18 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 77
+P + +L LNL+ C I G E + L K+ + L F D+
Sbjct: 306 IPKLPALSNLNLNRCNISD--RGCERFSRLEKLKVLN-----------------LGFNDI 346
Query: 78 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 137
+ L+ LT+ LE L+L S IGD+ +E +A L L LS+T + G+ L
Sbjct: 347 GDRCLAHMKGLTK---LESLNLDSCKIGDEGLENLA-GHKQLICLELSDTEVGNHGLEHL 402
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVL 193
+G L +LE ++LS T + D + + + SLK +++ I + + TDL L
Sbjct: 403 SG-LSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDL 461
Query: 194 --------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLH 244
L+ +L L + ++DA + + L+ L+L +N++LTD ++
Sbjct: 462 FGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTVE 521
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
++ L+ L +L++ + +T++GL K ++L+ L L +T + I +F +H
Sbjct: 522 LIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLE-SCKVTANDIKKFKLIH 575
>gi|195647464|gb|ACG43200.1| regulatory subunit [Zea mays]
Length = 581
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 135/306 (44%), Gaps = 60/306 (19%)
Query: 4 RLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
+L LNL VT + ++SL LNLS C I EG EN L K+ F
Sbjct: 283 KLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLGFN 340
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+A L L + LE L+L S IGD+ + + +
Sbjct: 341 QITDACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL-IQ 379
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L+NL LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N I
Sbjct: 380 LKNLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI 438
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ---------------------VSDA 217
+T L SLT L L HL+ T ++DA
Sbjct: 439 --------TDTGLA-SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDA 489
Query: 218 TLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
+ + K L L+L +N LTD +L +S L+ L +L++ ++ ++N GL KP ++L
Sbjct: 490 GVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQNL 549
Query: 277 KLLDLH 282
+ L L
Sbjct: 550 RSLSLE 555
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 17/223 (7%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L L++ +++ C ++++ +L L+LS I D+ E + + L+ L+L +
Sbjct: 284 LGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGL-TKLKALSLGFNQI 342
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + I L NLE L+L +I D + ++ + LK +++S+T +VG+
Sbjct: 343 TDACL-IHLKDLVNLECLNLDSCKIGDEGLFHLKGLIQLKNLELSDT-------EVGSN- 393
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L +L+ +NL T V+D L +S L L+L N +TD L L+ L
Sbjct: 394 ----GLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTGL 449
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+ LT+L + A +T+SG+ F+ ++++ L++ GG L+T+ +
Sbjct: 450 TGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGG-LITDAGV 491
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 46/265 (17%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L L+L + +T L ++ +LECLNL +C I G+E L
Sbjct: 329 LTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKI-----GDEGLFHL--------- 374
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + ++ LS +V ++ L L+ ++ L+ ++LS +++ D ++ ++ +
Sbjct: 375 -----KGLIQLKNLELSDTEVGSNGLRH---LSGLRNLQSINLSFTLVTDIGLKKISGL- 425
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
++L++LNL N + + G+ L G L L L L G +I D +S +++ +++
Sbjct: 426 SSLKSLNLDNRQITDTGLASLTG-LTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGG 484
Query: 176 ----------TDIKGF----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 221
D+K + Q G TD L L + L L LN+ ++VS+ L
Sbjct: 485 LITDAGVKNIKDLKALTLLNLSQNGKLTDKTLEL--ISGLTALVSLNVSNSRVSNLGLHH 542
Query: 222 LSTFKELIHLSLRNASLTDVSLHQL 246
L + L LSL + +T + +L
Sbjct: 543 LKPLQNLRSLSLESCRVTASEMDKL 567
>gi|149174587|ref|ZP_01853213.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
gi|148846697|gb|EDL61034.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
Length = 540
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 22/288 (7%)
Query: 10 LAWTGVTKLPNISSLECLNLSNCTIDSIL--EGNENKAPLAKISLAGTTFINEREAFLYI 67
L TG+ L +++ LE L+L N + + +G P +I AG I + + +
Sbjct: 193 LDGTGLVYLKHLNHLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKHLKKL 252
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
DV L +K LE L+ + I D V + + NL +L L +
Sbjct: 253 SLFGAEISDVG------LAHLQDLKKLESLEFARENISDKGVAHLKGL-LNLTSLRLDGS 305
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQV 185
R S AG+ LA L L+ L L T I D + ++ + SLK +D+S+T + G I
Sbjct: 306 RVSDAGLVHLA-KLQKLQSLDLGNTSISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLS 364
Query: 186 GAE---------TDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
+ T+L + L++L+NL+ L+ L++ ++++D L ++ L L L
Sbjct: 365 RLQNLESLYLRSTNLSGVGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFA 424
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+TD L LS L+ L L +++ ++++GL LK+LDL G
Sbjct: 425 TPITDQGLVHLSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEG 472
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
LD S S + L +++ L+ LDL ++ I D + + + +L++L+LS+T S G+
Sbjct: 302 LDGSRVSDAGLVHLAKLQKLQSLDLGNTSISDTGLIHLQEL-TSLKSLDLSDTAVSDDGL 360
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKGFIQ--QVGAETD 190
I L NLE L L T + +S + + L+++D+ S + +G I ++G+
Sbjct: 361 -IHLSRLQNLESLYLRSTNLSGVGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDS 419
Query: 191 LVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L L L L L +L++L+L++T +SDA L LS L L L +TD
Sbjct: 420 LGLFATPITDQGLVHLSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEGTRITDAG 479
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L L L++L L + ++++GL K L+ L
Sbjct: 480 LIHLQGLNELEQLELDKTAVSDAGLKHLKGLTKLQFL 516
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 33/227 (14%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
FL M A+E LD + ++ ++ + NL++++L T G + G L NLE+
Sbjct: 81 FLGFMTAVE-LDFEFGELSEEDFIAISQL-KNLKSIHLLITTIEEGGRKHITG-LQNLEL 137
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTA------- 197
LSL GT I D + Y+ + +L+ ++++NT I G G VL L
Sbjct: 138 LSLRGTTITDSDLKYVGALKNLQKLNLNNTAISDAGLAHLRGLSELRVLELEGTQLDGTG 197
Query: 198 ---LQNLNHLERLNLE------------------QTQVSDATLFPLSTFKELIHLSLRNA 236
L++LNHLE L+L+ + Q+ DA L + K L LSL A
Sbjct: 198 LVYLKHLNHLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKHLKKLSLFGA 257
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
++DV L L L KL +L +++ G+ K +L L L G
Sbjct: 258 EISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDG 304
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
NL+ G++ L N+S L+ L++ + N L ++ G+ ++
Sbjct: 378 NLSGVGLSSLKNLSMLQYLDMGYSKM--------NDQGLIAVAELGS-----------LD 418
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
+ L +++ L LT +K LDL + I D + ++ + A L+ L+L TR
Sbjct: 419 SLGLFATPITDQGLVHLSGLTNLKK---LDLQETSISDAGLVHLSHL-AGLKVLDLEGTR 474
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
+ AG+ L G L LE L L T + D + ++ + L+F+ T I
Sbjct: 475 ITDAGLIHLQG-LNELEQLELDKTAVSDAGLKHLKGLTKLQFLQYEETQI 523
>gi|168701673|ref|ZP_02733950.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 367
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 23/282 (8%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNL-SNCTIDSILEGNENKAPLAKISLAGTTF----IN 59
LSF + G+ +L + +L LNL S D+ ++ L + L T+ +
Sbjct: 56 LSFTRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAGMK 115
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
E A + T LS V+++ L L +K L +LDLS + + D ++ +A + L
Sbjct: 116 ELAALNNLTTLRLSGKGVTDAGLKE---LAALKKLANLDLSHTKVTDAGLKELAAL-KGL 171
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
+ L+NT + AG+ LA L L L LS T++ D + ++ + L + + T +
Sbjct: 172 TTIRLNNTEVTDAGLKELA-ALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKV- 229
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
TD L L LN L L+L T V+DA L L+ K L HL L +T
Sbjct: 230 ---------TDA--GLKELAGLN-LTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVT 277
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
V L +LS L LT L + + +T++G+ + L LDL
Sbjct: 278 GVGLKELSGLKGLTTLYLNNTKVTDAGVKELSGLKGLTTLDL 319
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 49 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 108
K++ AG + E A + T L+ +V+++ L L +K L LDLS + + D
Sbjct: 156 KVTDAG---LKELAALKGLTTIRLNNTEVTDAGLKE---LAALKKLADLDLSQTKVTDAG 209
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
++ +A + L L L T+ + AG+ LAG NL L L+GT + D + ++ + +L
Sbjct: 210 LKELAAL-KGLTCLGLLGTKVTDAGLKELAG--LNLTDLHLAGTPVTDAGLKELAALKNL 266
Query: 169 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
+ + T + G + L L L L L L T+V+DA + LS K L
Sbjct: 267 THLYLFGTKVTG------------VGLKELSGLKGLTTLYLNNTKVTDAGVKELSGLKGL 314
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L L +TD + L+ L LTNL + +T++G+
Sbjct: 315 TTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTDAGV 353
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 99 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 158
LS + + D ++ +A + NL +LNL +T + AGV LAG L L L L+ T + D
Sbjct: 56 LSFTRVTDKGLKELAGL-KNLTHLNLFSTWVTDAGVKELAG-LKGLTTLDLNSTSVTDAG 113
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 218
+ ++ + +L + +S KG L L L L L+L T+V+DA
Sbjct: 114 MKELAALNNLTTLRLSG---KGVTDA---------GLKELAALKKLANLDLSHTKVTDAG 161
Query: 219 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 278
L L+ K L + L N +TD L +L++L KL +L + +T++GL + L
Sbjct: 162 LKELAALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTC 221
Query: 279 LDLHG 283
L L G
Sbjct: 222 LGLLG 226
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
++ L T+V+D L L+ K L HL+L + +TD + +L+ L LT L + +T++
Sbjct: 53 KVYLSFTRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDA 112
Query: 266 GLGSFKPPRSLKLLDLHG 283
G+ +L L L G
Sbjct: 113 GMKELAALNNLTTLRLSG 130
>gi|356550632|ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 565
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ ++ C L ++ AL +L+LS + +D E + + NL+ LNL
Sbjct: 268 LNLLNLEGCQVTTACLDSLEELPALSNLNLSRCNLSNDGCEKFSRL-ENLKVLNLGFNDI 326
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + L G L L+ L+L +I+D + +++ L +++S+T I G+
Sbjct: 327 TDACLAHLKG-LTKLKSLNLDSCRIEDEGLVHLAGHQQLNCLELSDTGI-------GSN- 377
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L++LE++NL T V+D+ L L L L+L +TD L L+SL
Sbjct: 378 ----GLHHLSGLSNLEKINLSFTFVNDSGLSKLCGLSSLKSLNLDARQVTDTGLASLTSL 433
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+ LT L + A +T+ G K ++L+LL++ GG LT+D +
Sbjct: 434 TGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGE-LTDDGV 475
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 146/308 (47%), Gaps = 47/308 (15%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER- 61
+SF + G++ L + L LNL C + + L+ E L+ ++L+ N+
Sbjct: 248 EISFNKVTDFGISFLKGLQKLNLLNLEGCQVTTACLDSLEELPALSNLNLSRCNLSNDGC 307
Query: 62 EAFLYIETSL---LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
E F +E L F D++++ L+ LT++K+L +L S I D+ + +A
Sbjct: 308 EKFSRLENLKVLNLGFNDITDACLAHLKGLTKLKSL---NLDSCRIEDEGLVHLA-GHQQ 363
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L L LS+T S G+ L+G L NLE ++LS T ++D +S + + SLK +++
Sbjct: 364 LNCLELSDTGIGSNGLHHLSG-LSNLEKINLSFTFVNDSGLSKLCGLSSLKSLNLD---- 418
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL----- 233
+QV TD L +L +L L L+L +++D L FK L L +
Sbjct: 419 ---ARQV---TDT--GLASLTSLTGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGEL 470
Query: 234 --------------------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+N +LTD +L +S L+ L +L++ ++ +TN+GL K
Sbjct: 471 TDDGVKNIKELSSLKSLNLSQNCNLTDTTLELISGLTDLISLNVSNSGITNAGLQHLKTL 530
Query: 274 RSLKLLDL 281
++L+ L L
Sbjct: 531 KNLRSLSL 538
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 25/263 (9%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTFINEREA 63
LS NL+ G K + +L+ LNL N D+ L + L ++L E E
Sbjct: 297 LSRCNLSNDGCEKFSRLENLKVLNLGFNDITDACLAHLKGLTKLKSLNLDSCRI--EDEG 354
Query: 64 FLYIET-SLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+++ L+ L++S++ + L+ + LE ++LS + + D + + C ++L+
Sbjct: 355 LVHLAGHQQLNCLELSDTGIGSNGLHHLSGLSNLEKINLSFTFVNDSGLSKL-CGLSSLK 413
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-----SN 175
+LNL + + G+ L L L L L G +I D+ +Y+ +L+ ++I ++
Sbjct: 414 SLNLDARQVTDTGLASLTS-LTGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGELTD 472
Query: 176 TDIKGFIQ----------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
+K + Q TD L L + L L LN+ + +++A L L T
Sbjct: 473 DGVKNIKELSSLKSLNLSQNCNLTDTTLEL--ISGLTDLISLNVSNSGITNAGLQHLKTL 530
Query: 226 KELIHLSLRNASLTDVSLHQLSS 248
K L LSL + +T + +L S
Sbjct: 531 KNLRSLSLESCKVTANGIKKLQS 553
>gi|188586163|ref|YP_001917708.1| hypothetical protein Nther_1542 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350850|gb|ACB85120.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 344
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 28/279 (10%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFI 58
LS V L + +LE LNL+ I EG E A L +ISL T
Sbjct: 81 LQELSLQGTKIEDVNTLAEVDNLEELNLNYTEITD--EGIEQLAEADNLKQISLTHTDVT 138
Query: 59 NEREAFLY----IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 114
+E L +E +LS +V++ L L + L+ LDL + + DD E +A
Sbjct: 139 DEGTKLLAESESLERLILSGTEVTDDGLEH---LIEADNLKKLDLHGTDVTDDGAEHLAE 195
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
NL L+L +T + G+ L + NLE+L L T++ D + Y++ +L+ + +
Sbjct: 196 TD-NLEKLSLVDTEVTDEGIEQLV-KVDNLEVLILGWTEVTDNGVEYLAEADNLEMLHLD 253
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
T+I + AE D +LE L+L+QT+V+D L+ L L L
Sbjct: 254 GTEITNEGVKYLAEAD------------NLEELDLKQTKVTDVN--ALAETDSLEELDLW 299
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+ +TD + +L+ L +++ + +TN G+ +
Sbjct: 300 DTDVTDEGVKELAEADSLKVVNLDETEVTNEGVEHLEDE 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L L + + + L ++ LE L+L+ + I D+ +E +A NL+ ++L++T +
Sbjct: 81 LQELSLQGTKIEDVNTLAEVDNLEELNLNYTEITDEGIEQLAE-ADNLKQISLTHTDVTD 139
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G +LA +LE L LSGT++ D + ++ +LK +D+ TD+ + AETD
Sbjct: 140 EGTKLLA-ESESLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETD- 197
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+LE+L+L T+V+D + L L L L +TD + L+
Sbjct: 198 -----------NLEKLSLVDTEVTDEGIEQLVKVDNLEVLILGWTEVTDNGVEYLAEADN 246
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L + +TN G+ +L+ LDL
Sbjct: 247 LEMLHLDGTEITNEGVKYLAEADNLEELDL 276
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NL+ L+L T+ V LA + NLE L+L+ T+I D I ++ +LK I +++TD
Sbjct: 80 NLQELSLQGTKIED--VNTLA-EVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTHTD 136
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ AE++ LERL L T+V+D L L L L L
Sbjct: 137 VTDEGTKLLAESE------------SLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTD 184
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
+TD L+ L LS+ D +T+ G+ +L++L L GW D +++
Sbjct: 185 VTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVDNLEVLIL--GWTEVTDNGVEYLA 242
Query: 298 MHPRIEVWH 306
+E+ H
Sbjct: 243 EADNLEMLH 251
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 117 ANLRNLNLSNTRFSSAGVG-ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 175
++++ NL GV I ++ +L L++SG I+ I Y +L+ + +
Sbjct: 32 VDVQDENLKAAIKEELGVEQITEENIEDLTTLTVSGEDINIKGIEYA---INLQELSLQG 88
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
T I+ + L +++LE LNL T+++D + L+ L +SL +
Sbjct: 89 TKIE--------------DVNTLAEVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTH 134
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+TD L+ L L + +T+ GL +LK LDLHG
Sbjct: 135 TDVTDEGTKLLAESESLERLILSGTEVTDDGLEHLIEADNLKKLDLHG 182
>gi|168057635|ref|XP_001780819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667754|gb|EDQ54376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 564
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 43/248 (17%)
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
E + + T L + ++++S + FL + LE L+L S +GD+ ++ V + NLR
Sbjct: 309 EGLINLRTLNLGYNELTDSGM---VFLKGLTNLERLNLDSCKVGDEGIKHVKGL-LNLRM 364
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKG 180
L+LS++ + G+ L+G L LEIL+LS T + D +S ++ + SL +++ + I
Sbjct: 365 LDLSDSEVGNVGLRFLSG-LKKLEILNLSFTGGVTDIGLSTIATITSLTSLNLDSKQI-- 421
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
TD L AL L L+ L+L +++D + L FK L L L +TD
Sbjct: 422 --------TDT--GLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCGGGITD 471
Query: 241 V-------------------------SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
V SL LS + L +L++ ++ +TN+GL +P
Sbjct: 472 VGVSSIKDLTLLTSLNLSHNLRLTDRSLQYLSGMENLVSLNVANSKVTNAGLQHLRPLTK 531
Query: 276 LKLLDLHG 283
L L L G
Sbjct: 532 LTSLALQG 539
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ + L HL+++S + D + + + NLR LNL + +G+ L G L NLE L
Sbjct: 284 IAGLTTLCHLNINSCYLPDSGCQKLEGL-INLRTLNLGYNELTDSGMVFLKG-LTNLERL 341
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF---------------IQQVGAETDLV 192
+L ++ D I ++ + +L+ +D+S++++ + G TD+
Sbjct: 342 NLDSCKVGDEGIKHVKGLLNLRMLDLSDSEVGNVGLRFLSGLKKLEILNLSFTGGVTDIG 401
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
LS A + L LNL+ Q++D L L+ L +L L A +TD + +L L
Sbjct: 402 LSTIA--TITSLTSLNLDSKQITDTGLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNL 459
Query: 253 TNLSIRDAVLTNSGLGSFK 271
+L + +T+ G+ S K
Sbjct: 460 QSLELCGGGITDVGVSSIK 478
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 36/269 (13%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
L + L +G+ L +++LE LNL +C + G+E I +
Sbjct: 319 LGYNELTDSGMVFLKGLTNLERLNLDSCKV-----GDEG--------------IKHVKGL 359
Query: 65 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLN 123
L + LS +V N L FL+ +K LE L+LS + + D + +A + +L +LN
Sbjct: 360 LNLRMLDLSDSEVGNVGLR---FLSGLKKLEILNLSFTGGVTDIGLSTIATI-TSLTSLN 415
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
L + + + G+ L G L L+ L L G +I DY ++ + +L+ +++ G I
Sbjct: 416 LDSKQITDTGLAALTG-LTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCG----GGIT 470
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
VG + L+L NL+H RL +D +L LS + L+ L++ N+ +T+ L
Sbjct: 471 DVGVSSIKDLTLLTSLNLSHNLRL-------TDRSLQYLSGMENLVSLNVANSKVTNAGL 523
Query: 244 HQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
L L+KLT+L+++ +T + + K
Sbjct: 524 QHLRPLTKLTSLALQGCKVTRTAVDHLKA 552
>gi|255088361|ref|XP_002506103.1| predicted protein [Micromonas sp. RCC299]
gi|226521374|gb|ACO67361.1| predicted protein [Micromonas sp. RCC299]
Length = 610
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 33/268 (12%)
Query: 5 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI-------SL 52
L L+L W GV +L +++ LE LNL ++ EG ++ APL K+
Sbjct: 330 LKELSLEWCRVGDGGVRRLASLAKLEVLNLGYSSVTD--EGVQHLAPLVKLREIDLDSCQ 387
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
G + +E LS V N L R LT+++ ++LS S + DD V M
Sbjct: 388 VGDDACKALAEWPNLEDVNLSDTAVGNLGLKRISKLTRLR---RVNLSYSNVSDDGV-MY 443
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
A++R+L+L + G+G LA L ++E L L G +I D ++ MP LK ++
Sbjct: 444 LENAASIRSLSLDTRMVTDEGLGYLA-KLKDIEELDLFGARITDEGAKHLRHMPRLKTLE 502
Query: 173 ISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIH 230
+ I ++ +G D LT L NL Q ++SDA + L +L
Sbjct: 503 LCGGGITDAGVKHIG---DACRELTLL---------NLGQNFRISDAAVPFLLQLHKLGS 550
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L+L+ + +++ + QLS LS LT L+++
Sbjct: 551 LNLQYSRISNEGVTQLSQLSNLTTLALK 578
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 42/304 (13%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNLA T GV + ++S+LE LNL+ C I +G A L G T
Sbjct: 279 LKKLKHLNLARTKVDDQGVATIGSLSALETLNLAGC---RITDG-------ACFLLGGLT 328
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E L + V + + R L + LE L+L S + D+ V+ +A +
Sbjct: 329 ALKELS---------LEWCRVGDGGVRR---LASLAKLEVLNLGYSSVTDEGVQHLAPL- 375
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
LR ++L + + LA PNLE ++LS T + + + +S + L+ +++S +
Sbjct: 376 VKLREIDLDSCQVGDDACKALA-EWPNLEDVNLSDTAVGNLGLKRISKLTRLRRVNLSYS 434
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ D V+ L +N + L+L+ V+D L L+ K++ L L A
Sbjct: 435 NVS---------DDGVMYL---ENAASIRSLSLDTRMVTDEGLGYLAKLKDIEELDLFGA 482
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP-RSLKLLDLHGGWLLTEDAILQF 295
+TD L + +L L + +T++G+ R L LL+L + +++ A+
Sbjct: 483 RITDEGAKHLRHMPRLKTLELCGGGITDAGVKHIGDACRELTLLNLGQNFRISDAAVPFL 542
Query: 296 CKMH 299
++H
Sbjct: 543 LQLH 546
>gi|149175887|ref|ZP_01854505.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845334|gb|EDL59679.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 360
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L + VS S L+ LT L L+L + + + ++ V C A LR LNL+ T S
Sbjct: 167 LFYTPVSGSGLAHLQGLTN---LTWLNLQGTAVTNAGLKQVNCFSA-LRVLNLNQTSISD 222
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
AG+ L LP L IL L TQ+ +S +S +P L + ++ + I
Sbjct: 223 AGLVHLRD-LPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDS---------- 271
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
S++ L++ L RL L+ TQ+SDA L LS L L+L +TD L L L +
Sbjct: 272 --SMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPR 329
Query: 252 LTNLSIRDAVLTNSGLGSFK 271
L N+ +++ +T+ GL K
Sbjct: 330 LKNVYLKNTQVTSEGLEQRK 349
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 64 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
F +E LS +SN+ L L + L+ L L ++ + DD + + + + L +L+
Sbjct: 111 FPNLERISLSGKGLSNTGL---VHLKRFHRLKRLMLWNTSVSDDGLVHLKEL-SQLNHLD 166
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
L T S +G+ L G L NL L+L GT + + + ++ +L+ ++++ T I
Sbjct: 167 LFYTPVSGSGLAHLQG-LTNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTSISD--- 222
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
L L++L L L LEQTQV+ L LS+ +L L L + + D S+
Sbjct: 223 ---------AGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDSSM 273
Query: 244 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 303
L S L L ++D ++++GL L L+L G + DA L + + PR++
Sbjct: 274 SHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQV--TDAGLVYLQGLPRLK 331
Query: 304 VWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMP 342
+V + Q+ S G R +++Q +DP+P
Sbjct: 332 -----NVYLKNTQVTSEGLEQ-----RKLILQQSRDPLP 360
>gi|242076388|ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
gi|241939313|gb|EES12458.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
Length = 581
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 60/306 (19%)
Query: 4 RLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
+L LNL VT + ++SL LNLS C I EG EN L K+ F
Sbjct: 283 KLGHLNLEGCSVTAACLEVISELASLVLLNLSRCGICD--EGCENLEGLTKLKALNLGFN 340
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+ A L L + +LE L+L S IGD+ + + +
Sbjct: 341 HITGACLI--------------------HLKDLISLECLNLDSCKIGDEGLFHLKGL-IQ 379
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L++L LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N I
Sbjct: 380 LKSLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI 438
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQV-----SDA 217
+T L SLT L L HL+ NL+ +V +DA
Sbjct: 439 --------TDTGLA-SLTNLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGGLITDA 489
Query: 218 TLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
+ + K L L+L +N +LTD +L +S L+ L +L++ ++ ++NSGL KP +L
Sbjct: 490 GVKNIKDLKALTLLNLSQNGNLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLLNL 549
Query: 277 KLLDLH 282
+ L L
Sbjct: 550 RSLSLE 555
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 17/223 (7%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L L++ S++ C ++++ +L L+LS I D+ E + + L+ LNL
Sbjct: 284 LGHLNLEGCSVTAACLEVISELASLVLLNLSRCGICDEGCENLEGL-TKLKALNLGFNHI 342
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + I L +LE L+L +I D + ++ + LK +++S+T +VG+
Sbjct: 343 TGACL-IHLKDLISLECLNLDSCKIGDEGLFHLKGLIQLKSLELSDT-------EVGSN- 393
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L +L+ +NL T V+D L +S L L+L N +TD L L++L
Sbjct: 394 ----GLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTNL 449
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+ LT+L + A +T+SG+ F+ ++L+ L++ GG L+T+ +
Sbjct: 450 TGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGG-LITDAGV 491
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 46/265 (17%)
Query: 2 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L LNL + +T L ++ SLECLNL +C I G+E L
Sbjct: 329 LTKLKALNLGFNHITGACLIHLKDLISLECLNLDSCKI-----GDEGLFHL--------- 374
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + +++ LS +V ++ L L+ ++ L+ ++LS +++ D ++ ++ +
Sbjct: 375 -----KGLIQLKSLELSDTEVGSNGLRH---LSGLRNLQSINLSFTLVTDIGLKKISGL- 425
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
++L++LNL N + + G+ L +L L L L G +I D ++ +L+ +++
Sbjct: 426 SSLKSLNLDNRQITDTGLASLT-NLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGG 484
Query: 176 ----------TDIKGF----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 221
D+K + Q G TD L L + L L LN+ ++VS++ L
Sbjct: 485 LITDAGVKNIKDLKALTLLNLSQNGNLTDKTLEL--ISGLTALVSLNVSNSRVSNSGLHH 542
Query: 222 LSTFKELIHLSLRNASLTDVSLHQL 246
L L LSL + +T + +L
Sbjct: 543 LKPLLNLRSLSLESCRVTASEIDKL 567
>gi|149174591|ref|ZP_01853217.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
gi|148846701|gb|EDL61038.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
Length = 346
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ Q+K+L+ LD SSS+I D + + NL L L T AG+ L L L++L
Sbjct: 110 IAQLKSLKILDFSSSLITDSDMSYFQGL-YNLEALILERTSIGDAGLYHLRD-LRKLKVL 167
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
L T + D +SY+ + L ++++S T I L L+ + +L+ L
Sbjct: 168 RLWETDVTDVGLSYLKDLTELTYLNLSETKISD------------AGLIHLKGMLNLQTL 215
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L+ TQVSD L L +L L L +A +TD L LS L L++ D +++ GL
Sbjct: 216 YLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKLTLADTQISDQGL 275
Query: 268 GSFKPPRSLKLLDL 281
+ L LD+
Sbjct: 276 VYLGKLKELHELDI 289
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
L LNLS T+ S AG+ L G L NL+ L L TQ+ D + Y+ +P L+ +D+ + +
Sbjct: 187 ELTYLNLSETKISDAGLIHLKGML-NLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAE 245
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ TD L L +L++L L TQ+SD L L KEL L +R +
Sbjct: 246 V----------TDA--GLVHLSECRNLKKLTLADTQISDQGLVYLGKLKELHELDIRYTN 293
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRS 275
+D L L L L L+ +T++G L F P S
Sbjct: 294 TSDAGLVHLQGLKSLAYLNWESTKITDAGYTRLHEFLPKLS 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 99 LSSSMIGDDSVEMVACVGA-----NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
+SS GDD A + A +L+ L+ S++ + + + G L NLE L L T
Sbjct: 91 ISSVGYGDDYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQG-LYNLEALILERTS 149
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 213
I D + ++ + LK + + TD+ TD+ LS L++L L LNL +T+
Sbjct: 150 IGDAGLYHLRDLRKLKVLRLWETDV----------TDVGLSY--LKDLTELTYLNLSETK 197
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+SDA L L L L L ++D L L L KL L + DA +T++GL
Sbjct: 198 ISDAGLIHLKGMLNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSEC 257
Query: 274 RSLKLLDL 281
R+LK L L
Sbjct: 258 RNLKKLTL 265
>gi|168698162|ref|ZP_02730439.1| hypothetical protein GobsU_01482 [Gemmata obscuriglobus UQM 2246]
Length = 295
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L V+++ L LT L L L + + D +E +A + NL L+L T+ + AG+
Sbjct: 10 LQVTDAGLKELAGLTN---LTQLILLGTAVTDVGLEELAPL-KNLNTLDLGKTKVTDAGL 65
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LA L L L+L T + D + + SLK + + +T + TD
Sbjct: 66 KALA-PLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKV----------TDA--G 112
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L L +L L L T V+DA L L FK L L L +TD L +L+ L LT
Sbjct: 113 LKELGRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTE 172
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L + + + GL P ++L LDL+
Sbjct: 173 LGLGGTGVADVGLKELAPFKNLAKLDLY 200
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NL L L T + G+ LA L NL L L T++ D + ++ + L + + +T
Sbjct: 25 NLTQLILLGTAVTDVGLEELA-PLKNLNTLDLGKTKVTDAGLKALAPLTGLTRLALGDTG 83
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ TD L L L+ L L T+V+DA L L FK L L L
Sbjct: 84 V----------TDA--GLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLGGTG 131
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+TD L +L LT L + +T++GL P ++L L L G
Sbjct: 132 VTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGG 177
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 77 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVG 135
V+++ L LT L L L + + D + E+V +L+ L L +T+ + AG+
Sbjct: 60 VTDAGLKALAPLT---GLTRLALGDTGVTDAGLKELVPF--KSLKTLYLFSTKVTDAGLK 114
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 195
L G NL +L L GT + D + + +L + +S T + TD L
Sbjct: 115 EL-GRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGV----------TDA--GL 161
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L L +L L L T V+D L L+ FK L L L + +TD L +
Sbjct: 162 KELAPLKNLTELGLGGTGVADVGLKELAPFKNLAKLDLYSTKVTDAGLKE 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L K+L+ L L S+ + D ++ + NL L L T + AG+ L G NL L
Sbjct: 92 LVPFKSLKTLYLFSTKVTDAGLKELGRF-KNLTVLGLGGTGVTDAGLREL-GRFKNLTAL 149
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
LSGT + D + ++ + +L + + T + VG L L +L +L
Sbjct: 150 GLSGTGVTDAGLKELAPLKNLTELGLGGTGV----ADVG--------LKELAPFKNLAKL 197
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+L T+V+DA L L K L L L +TD L +L+ L LT L + +T++GL
Sbjct: 198 DLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTDAGL 257
Query: 268 GSFKPPRSLKLLDLH------GGW 285
+L L+L+ GW
Sbjct: 258 KELAGLTNLTRLNLYRTKVTDAGW 281
>gi|149176763|ref|ZP_01855374.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844404|gb|EDL58756.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 416
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 22/242 (9%)
Query: 56 TFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 113
T I ++ A Y++ L L ++ S++ L +M +L L L I D ++
Sbjct: 127 TIITDQGA-TYLKQQKLGHLGITGGSMTDNGLNELAEMNSLRTLGLHHLAITGD--QLPP 183
Query: 114 CVGANLRNLNLSNTRFSSAGVGILAGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKFI 171
L+ L+LS+TRF++ G+ L+ PN L L LS T + + +S P+L+ +
Sbjct: 184 NTFPKLKMLDLSDTRFTNQGLKNLS---PNASLVYLHLSNTNVSSAGLQELSKFPNLRAL 240
Query: 172 DISNTDIKGF----------IQQVGAETDLVLSLTALQ--NLNHLERLNLEQTQVSDATL 219
+ N IK + Q+ + V ALQ L+ + +L L+Q+Q++D L
Sbjct: 241 RLGNLKIKAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGL 300
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L+T K L L L A +TD L LS L KL L + D +++ GL +L++L
Sbjct: 301 RHLATMKNLETLFLPGAKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRML 360
Query: 280 DL 281
+L
Sbjct: 361 NL 362
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 2 FPRLSFLNLAWTGVTK--LPNIS---SLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
FP+L L+L+ T T L N+S SL L+LSN + S +K P + G
Sbjct: 186 FPKLKMLDLSDTRFTNQGLKNLSPNASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNL 245
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFL--TQMKALEHLDLSSSMIGDDSVEMVAC 114
I L LD+ ++++ L +Q+ + L L S I D + +A
Sbjct: 246 KIKAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLAT 305
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ NL L L + + +G+ +L+ LP L+ L LS TQI D + +S +P+L+ +++S
Sbjct: 306 M-KNLETLFLPGAKITDSGLKVLS-QLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLS 363
Query: 175 NTDIKGFIQQV 185
NT + +Q+
Sbjct: 364 NTRVTDQAKQI 374
>gi|357164542|ref|XP_003580088.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Brachypodium distachyon]
Length = 580
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 144/308 (46%), Gaps = 47/308 (15%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER- 61
+LS ++ GV+ L +S L LNL C + + LE A L ++L +E
Sbjct: 263 QLSCCKISDIGVSYLKGLSKLAHLNLEGCAVTAACLEAISGLASLILLNLNRCGIYDEGC 322
Query: 62 ---EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
E + ++ L F ++++ L L ++ +LE L+L S IGD+ + +
Sbjct: 323 ENLEGLVKLKVLNLGFNHITDACLVH---LKELVSLECLNLDSCKIGDEGLLHLK-GLLQ 378
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
LR+L LS+T S G+ L+G L NL+ ++LS T + D + ++ + SLK +++ N I
Sbjct: 379 LRSLELSDTEVGSNGLRHLSG-LRNLQSMNLSFTLVTDIGLKKVAGLNSLKSLNLDNRQI 437
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL----- 233
TD L AL L L L+L +++D+ L FKEL L L
Sbjct: 438 ----------TDN--GLAALAGLTGLTHLDLFGARITDSGTNCLRYFKELQSLELCGGLI 485
Query: 234 --------------------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+N +LTD +L +S L+ L +L++ + ++N+GL K
Sbjct: 486 TDAGVKNIKDLKALTLLNLSQNGNLTDRTLELISGLTALVSLNLSNTRVSNAGLHHLKLL 545
Query: 274 RSLKLLDL 281
++L+ L L
Sbjct: 546 QNLRSLSL 553
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 52/278 (18%)
Query: 4 RLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
+L LNL + +T L + SLECLNL +C I G+E G +
Sbjct: 330 KLKVLNLGFNHITDACLVHLKELVSLECLNLDSCKI-----GDE-----------GLLHL 373
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+E LS +V ++ L L+ ++ L+ ++LS +++ D ++ VA G N
Sbjct: 374 KGLLQLRSLE---LSDTEVGSNGLRH---LSGLRNLQSMNLSFTLVTDIGLKKVA--GLN 425
Query: 119 -LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA---ISYMSMMPSLKFID-- 172
L++LNL N + + G+ LAG L L L L G +I D + Y + SL+
Sbjct: 426 SLKSLNLDNRQITDNGLAALAG-LTGLTHLDLFGARITDSGTNCLRYFKELQSLELCGGL 484
Query: 173 ISNTDIKGF----------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
I++ +K + Q G TD L L + L L LNL T+VS+A L L
Sbjct: 485 ITDAGVKNIKDLKALTLLNLSQNGNLTDRTLEL--ISGLTALVSLNLSNTRVSNAGLHHL 542
Query: 223 STFKELIHLSLRNASLT--DVSLHQLSSLSKLTNLSIR 258
+ L LSL + +T ++ QL+SL L +S+R
Sbjct: 543 KLLQNLRSLSLDSCKVTASEIKKIQLASLPNL--ISVR 578
>gi|168698161|ref|ZP_02730438.1| hypothetical protein GobsU_01477 [Gemmata obscuriglobus UQM 2246]
Length = 417
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 5 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L+ LNL T GV +L +L LNLS T+ + +
Sbjct: 75 LTTLNLGATKVTDVGVKELAGFKALTTLNLSFTTLTDV-------------------GVK 115
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--- 116
E F + T L++ DV+++ + L +KAL L L + + D V+ +A +
Sbjct: 116 ELAGFKALTTLELNYTDVTDAGVKE---LAGLKALTTLGLGGTKVTDAGVKELASLKELS 172
Query: 117 ------------------ANLR---NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 155
A L+ L L T+ + AGV LAG L L L L T +
Sbjct: 173 VLGLFAAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKELAG-LKALTTLDLHYTGVT 231
Query: 156 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 215
D + ++ + +L +D+ NT + TD + L L L LNL +V+
Sbjct: 232 DAGVKELAGLKALSVLDLGNTGV----------TDA--GVKELAGLKALTTLNLGGAKVT 279
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
DA + L+ K L L+L +TD L +L+ LT L + LT++G+ +
Sbjct: 280 DAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTA 339
Query: 276 LKLLDLHG 283
L LLDL G
Sbjct: 340 LTLLDLSG 347
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECL--NLSNCTIDSILEGNENKAPLAKISLAG 54
F L+ LNL++T GV +L +L L N ++ T + E KA L + L G
Sbjct: 96 FKALTTLNLSFTTLTDVGVKELAGFKALTTLELNYTDVTDAGVKELAGLKA-LTTLGLGG 154
Query: 55 TTFINE--REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
T + +E E S+L + + L +KAL L+L + + D V+ +
Sbjct: 155 TKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKEL 214
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
A + A L L+L T + AGV LAG L L +L L T + D + ++ + +L ++
Sbjct: 215 AGLKA-LTTLDLHYTGVTDAGVKELAG-LKALSVLDLGNTGVTDAGVKELAGLKALTTLN 272
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+ + TD + L L L LNL T+V+D L L+ FK L L
Sbjct: 273 LGGAKV----------TDA--GVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLD 320
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L +LTD + +L+ L+ LT L + LT++G+ P +L +L L
Sbjct: 321 LSFTTLTDAGVKELAGLTALTLLDLSGTTLTDAGVKELAPLTNLTMLYL 369
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 32/291 (10%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG-- 54
F L+ L L +T GV +L + +L L L + G + A L ++S+ G
Sbjct: 120 FKALTTLELNYTDVTDAGVKELAGLKALTTLGLGGTKVTD--AGVKELASLKELSVLGLF 177
Query: 55 ------TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 108
+ E + T L V+++ + L +KAL LDL + + D
Sbjct: 178 AAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKE---LAGLKALTTLDLHYTGVTDAG 234
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
V+ +A + A L L+L NT + AGV LAG L L L+L G ++ D + ++ + +L
Sbjct: 235 VKELAGLKA-LSVLDLGNTGVTDAGVKELAG-LKALTTLNLGGAKVTDAGVKELAGLKAL 292
Query: 169 KFIDISNTDIK--GFIQQVG--AETDLVLSLTALQNLNHLERL--------NLEQTQVSD 216
+++ T + G + G A T L LS T L + E +L T ++D
Sbjct: 293 STLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTTLTD 352
Query: 217 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
A + L+ L L L +TD L +L+ L LT L + + +T++G+
Sbjct: 353 AGVKELAPLTNLTMLYLGETGVTDAGLKELAGLKNLTALFLFNTKVTDAGV 403
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 47 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 106
L K++ AG + E + T L + V+++ + L +KAL LDL ++ + D
Sbjct: 203 LTKVTDAG---VKELAGLKALTTLDLHYTGVTDAGVKE---LAGLKALSVLDLGNTGVTD 256
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
V+ +A + A L LNL + + AGV LAG L L L+L GT++ D + ++
Sbjct: 257 AGVKELAGLKA-LTTLNLGGAKVTDAGVKELAG-LKALSTLNLGGTKVTDTGLKELAGFK 314
Query: 167 SLKFIDISNTDI--KGFIQQVGAETDLVLSLTA----------LQNLNHLERLNLEQTQV 214
+L +D+S T + G + G +L L+ L L +L L L +T V
Sbjct: 315 ALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTTLTDAGVKELAPLTNLTMLYLGETGV 374
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
+DA L L+ K L L L N +TD + +L++
Sbjct: 375 TDAGLKELAGLKNLTALFLFNTKVTDAGVKELTA 408
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L L LNL T ++D + L+ FK L L L +TD + +L+ L LT L +
Sbjct: 93 LAGFKALTTLNLSFTTLTDVGVKELAGFKALTTLELNYTDVTDAGVKELAGLKALTTLGL 152
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+T++G+ + L +L L +T+ + + +
Sbjct: 153 GGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELAGLKA 195
>gi|283780172|ref|YP_003370927.1| hypothetical protein Psta_2397 [Pirellula staleyi DSM 6068]
gi|283438625|gb|ADB17067.1| leucine-rich repeat cysteine-containing subtype [Pirellula staleyi
DSM 6068]
Length = 443
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLE 145
++ K L L L S +G D ++++ + + L+ L L + + + +AG L +LE
Sbjct: 235 YIKDCKNLASLSLEQSAVGVDGMKVIGGL-SKLKELKLYGASNVTDDALAQIAG-LKDLE 292
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
IL L T + +++ M LK +D+S T I G L AL L +LE
Sbjct: 293 ILELRSTTTTSKGMVHLAGMSKLKLLDLSET---ANIDNAG--------LAALAPLTNLE 341
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
+NL T V DA L PL+ +L L+L +TD L L LS L L I +T++
Sbjct: 342 EINLWYTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSNLEFLHIGSTRVTDT 401
Query: 266 GLGSFKPPRSLK 277
GL + ++LK
Sbjct: 402 GLAELEGLKNLK 413
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 125 SNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF 181
+N R + AG+ L GH P L IL L + + D + +++ +P+L+ I + D+ KG+
Sbjct: 102 ANVRGVTDAGLANLDGH-PTLRILVLELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGY 160
Query: 182 IQQVGAETDLVLS----------LTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIH 230
+T + L A+++++ LE L+L+ QV++A L PL+ +L
Sbjct: 161 ESLAKIKTLRRIRAPQTNFNDDCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKS 220
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
L + ++TD + + L +LS+ + + G+ LK L L+G +T+D
Sbjct: 221 LRIYGPTITDTVMGYIKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDD 280
Query: 291 AILQFCKM 298
A+ Q +
Sbjct: 281 ALAQIAGL 288
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 27/249 (10%)
Query: 18 LPNISSLECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSL 71
+ ++S LE L+L +C + + E APLA ++ + G T + ++ +L
Sbjct: 187 IKDMSQLELLDLQDC--NQVTEAG--LAPLAGMTKLKSLRIYGPTITDTVMGYIKDCKNL 242
Query: 72 LSF-LDVSNSSLSRFCFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
S L+ S + + + L+ L L +S + DD++ +A + +L L L +T
Sbjct: 243 ASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGL-KDLEILELRSTTT 301
Query: 130 SSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
+S G+ LAG + L++L LS T ID+ ++ ++ + +L+ I++ T F+ G
Sbjct: 302 TSKGMVHLAG-MSKLKLLDLSETANIDNAGLAALAPLTNLEEINLWYT----FVDDAG-- 354
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L L + L+RLNL++ QV+DA L L L L + + +TD L +L
Sbjct: 355 ------LAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSNLEFLHIGSTRVTDTGLAELEG 408
Query: 249 LSKLTNLSI 257
L L +L I
Sbjct: 409 LKNLKHLVI 417
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
L++S+ + + LT++ ALE + L + E +A + LR + T F+
Sbjct: 125 VLELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGYESLAKI-KTLRRIRAPQTNFNDDC 183
Query: 134 VGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
+ + + LE+L L Q+ + ++ ++ M LK + I I TD V
Sbjct: 184 LAAIK-DMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPTI----------TDTV 232
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 251
+ +++ +L L+LEQ+ V + + +L L L AS +TD +L Q++ L
Sbjct: 233 MGY--IKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKD 290
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L +R T+ G+ LKLLDL
Sbjct: 291 LEILELRSTTTTSKGMVHLAGMSKLKLLDL 320
>gi|430746590|ref|YP_007205719.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
gi|430018310|gb|AGA30024.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
Length = 506
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 25/295 (8%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDS--ILEGNENKAPLAKISLAGTTFINEREAFLY 66
NL G+ +L +S L+ L++ T DS L G K L+ + L ++ A +
Sbjct: 162 NLTPAGMAQLRTLSRLKGLSVRGFT-DSHGFLAGLMGKTRLSHLRLPEAAVTDDEMAIIG 220
Query: 67 IETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-----DSVEMVACVGANLR 120
T L LD N + F + +K L LD+ I D D V++ +G +
Sbjct: 221 GLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITDLAPVTDLVQL-DVLGLSPD 279
Query: 121 NLNLSNTRFSSAG---VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+ + S G +G L G L NL L+L TQI+D ++ + +P L ++ I
Sbjct: 280 RATFARSVPSPGGPSSLGPLRG-LTNLTQLTLGATQIEDRELAVAAGLPKLSYLMIGGRR 338
Query: 178 IK----GFIQQVGAETDLVLSLTALQNLNHLE-------RLNLEQTQVSDATLFPLSTFK 226
I + + + T L + T++ +L L L +E + ++DA L PLS
Sbjct: 339 ITEAGLARLAESKSLTGLRFTDTSIADLRPLSPRLHALWGLYMENSALTDAGLEPLSDAT 398
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ L++ + +TD LH L+ L L L + + +T++GLG K +SL+ L L
Sbjct: 399 RIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAITDAGLGRLKSLKSLETLSL 453
>gi|283779302|ref|YP_003370057.1| hypothetical protein Psta_1522 [Pirellula staleyi DSM 6068]
gi|283437755|gb|ADB16197.1| hypothetical protein Psta_1522 [Pirellula staleyi DSM 6068]
Length = 303
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 51/256 (19%)
Query: 37 ILEGNENKAPLAKISLAGTTFINER------EAFLYIETSLLSFLDVSNSSL--SRFCFL 88
+L E + +++ + G+ N R +A Y + L LD+S +S S L
Sbjct: 68 LLRSREQQQIFSRVVMVGSH--NNRLRYEPTDAAAYASLTQLQQLDLSTTSADDSLLQVL 125
Query: 89 TQMKALEHLDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
Q++ LE LDLS +++ G D + LR LNL+NTRF A ++ G LP LE L
Sbjct: 126 PQLRQLETLDLSGTLVTGHDCPSLAGLT--QLRELNLANTRFQPAAWRVING-LPKLEKL 182
Query: 148 SLSGTQIDD-YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
+L TQ+DD + I P HL+
Sbjct: 183 NLGSTQVDDAWVIELCQRQP------------------------------------HLQL 206
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L L +T+V+D ++ +++ + L L L S+T+ + QL+ L + I + +
Sbjct: 207 LGLSKTKVTDQSMSAIASLRLLETLYLEQVSITNQGVQQLAKSRSLRCIDIGHNAIDDGC 266
Query: 267 LGSFKPPRSLKLLDLH 282
+ + S+K + +H
Sbjct: 267 IAALIAMPSMKAISIH 282
>gi|442319589|ref|YP_007359610.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
gi|441487231|gb|AGC43926.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
Length = 600
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 39/309 (12%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+ L + LE L+LS+ + D + + A L + L+GT + A L + L+
Sbjct: 205 GLRFLSAQAELEWLDLSDTSTDDRVLAWVSGAHLHTLILSGTQVTDAGLARLR-DMPHLT 263
Query: 74 FLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+L ++ + L+ + ++ALE L L + + D + +A +L L L+ TR
Sbjct: 264 WLGLARTGLTDGGLAPIGALRALEALHLGETQVTDAGLLHLA-ESKSLEALVLTKTRLHG 322
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF---------- 181
G+ LAG L LE+L L T++DD A+ ++ + +L+ +++S T I G
Sbjct: 323 PGLQHLAG-LTRLELLHLDDTRLDDAAMRHLRGLVALRELELSRTLITGAGLASLDALSA 381
Query: 182 IQQVGAETDLVLS--LTALQNLNHLERLNLEQTQVS----------------------DA 217
++++G V + L LQ L RL+L T V D
Sbjct: 382 LERLGVSGLAVTADALAVLQKTERLTRLDLSHTPVGPEALAHVPSGLRELDLSRTAFNDE 441
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 277
L L L L LTD+ L QL L++L L + ++ SGL + L
Sbjct: 442 WLPSLRRLSRLQSLRAERTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLPHLA 501
Query: 278 LLDLHGGWL 286
LDL WL
Sbjct: 502 HLDLGATWL 510
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 63 AFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
A L TSL++ L S SSL + L A E L L + + D + ++ + L
Sbjct: 111 AALVRGTSLVT-LRASGSSLGDAHLGALRDFTAWEALHLDGTRVTDAGLPHLSGL-RRLS 168
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
+ L T S G+ L G L L + L+GT + + ++S L+++D+S+T
Sbjct: 169 VVRLEETAISDKGLAFLEG-LTTLRRVGLAGTSVSAQGLRFLSAQAELEWLDLSDTSTD- 226
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
D VL A + HL L L TQV+DA L L L L L LTD
Sbjct: 227 ---------DRVL---AWVSGAHLHTLILSGTQVTDAGLARLRDMPHLTWLGLARTGLTD 274
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L + +L L L + + +T++GL +SL+ L L
Sbjct: 275 GGLAPIGALRALEALHLGETQVTDAGLLHLAESKSLEALVL 315
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 14 GVTKLPNISSLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINER----EAFLYIE 68
G+ L ++ LE L+L + +D + + L ++ L+ T +A +E
Sbjct: 324 GLQHLAGLTRLELLHLDDTRLDDAAMRHLRGLVALRELELSRTLITGAGLASLDALSALE 383
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
+S L V+ +L+ L + + L LDLS + +G E +A V + LR L+LS T
Sbjct: 384 RLGVSGLAVTADALA---VLQKTERLTRLDLSHTPVGP---EALAHVPSGLRELDLSRTA 437
Query: 129 F------------------------SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
F + G+G L G L L L LSGT ++ ++++
Sbjct: 438 FNDEWLPSLRRLSRLQSLRAERTLLTDLGLGQL-GELTELAALHLSGTLVNGSGLAHLQR 496
Query: 165 MPSLKFIDISNTDIKGF----IQQVGAETDLVLSLTALQN--LNHL----ERLNLEQTQV 214
+P L +D+ T ++ +Q + T L L+ L + L HL L L +T V
Sbjct: 497 LPHLAHLDLGATWLEAHYTPALQGLTRLTWLSLARGRLGDAALGHLPPGLHTLYLTRTGV 556
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
+DA L L + L L LR ++TD + LS
Sbjct: 557 TDAGLDSLRSLPHLRQLDLRGTAVTDAARDALS 589
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 124/310 (40%), Gaps = 63/310 (20%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
P L++L LA TG+T + + +LE L+L +++ AG
Sbjct: 259 MPHLTWLGLARTGLTDGGLAPIGALRALEALHLGET----------------QVTDAGLL 302
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E ++ +E +L+ + L LT+++ L HLD + + D ++ + +
Sbjct: 303 HLAESKS---LEALVLTKTRLHGPGLQHLAGLTRLELL-HLD--DTRLDDAAMRHLRGLV 356
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
A LR L LS T + AG+ L L LE L +SG + A++ + L +D+S+T
Sbjct: 357 A-LRELELSRTLITGAGLASLDA-LSALERLGVSGLAVTADALAVLQKTERLTRLDLSHT 414
Query: 177 DIK--------------------------------GFIQQVGAETDLV--LSLTALQNLN 202
+ +Q + AE L+ L L L L
Sbjct: 415 PVGPEALAHVPSGLRELDLSRTAFNDEWLPSLRRLSRLQSLRAERTLLTDLGLGQLGELT 474
Query: 203 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 262
L L+L T V+ + L L L HL L L L L++LT LS+ L
Sbjct: 475 ELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWLEAHYTPALQGLTRLTWLSLARGRL 534
Query: 263 TNSGLGSFKP 272
++ LG P
Sbjct: 535 GDAALGHLPP 544
>gi|357478391|ref|XP_003609481.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355510536|gb|AES91678.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 576
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 19/295 (6%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G + LE LN+ C DS ++ L ++ ++ ++ + ++L
Sbjct: 220 GFVHFKGLKKLESLNIGCCKCVTDSDMKAISGFINLKELQISNSSITDLGISYLR-GLQK 278
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
LS L+V S++ CF ++ + AL L+L+ + DD E + + L+ L+L+ +
Sbjct: 279 LSTLNVEGCSITAACFEYISALAALACLNLNRCGLSDDGFEKFSGL-TGLKRLSLAFNKI 337
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV 185
+ A + L G L LE L+L QI D + ++ + LK + +S+T++ +I +
Sbjct: 338 TDACLVHLKG-LTKLEYLNLDSCQIGDEGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGL 396
Query: 186 GAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
DL LS T++ + L +L+ LNL+ Q++DA L L++ LI L L A
Sbjct: 397 NKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDLFGAR 456
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+TD L S L +L I +LT++G+ + + SL L+L LT+ +
Sbjct: 457 ITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTL 511
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 64/283 (22%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L L+LA+ +T L ++ LE LNL +C I G+E L ++L
Sbjct: 327 LKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQI-----GDEGLVNLTGLTL------- 374
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
+++ +LS +V NS + +++ + LE L+LS + + D+ ++ + + NL
Sbjct: 375 -------LKSLVLSDTEVGNSGIR---YISGLNKLEDLNLSFTSVTDNGLKRLLGL-TNL 423
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
++LNL + + AG+ L L L L L G +I D +Y+ +L+ ++I
Sbjct: 424 KSLNLDARQITDAGLANLT-SLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICG---- 478
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
G + G + ++ + L +LNL Q N LT
Sbjct: 479 GLLTDAGVKN--------IREIVSLTQLNLSQ-----------------------NCKLT 507
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
D +L +S ++ L +L++ ++ +TN GL KP ++L+ L L
Sbjct: 508 DKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLE 550
>gi|149177419|ref|ZP_01856023.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148843752|gb|EDL58111.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 375
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 53/294 (18%)
Query: 20 NISSLECLNLSNCTID----SILEGNENKAPLAKISLAGTTFINER-----EAFLYIETS 70
+++LE L+L NC+++ S L G + L + L+G + I++ ++
Sbjct: 118 KVTTLENLDLRNCSLNNKAISYLTG---LSKLKALRLSGNSDIDDDAMADINQLTNLKAL 174
Query: 71 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+L FL VS LS+ L + LE L L+ +++ DD + + T+F
Sbjct: 175 MLDFLWVSGDGLSQ---LKDLNKLEELYLAKTLVDDDGLATL--------------TQF- 216
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
P L+ LS QI D ++ + +P L+ ID+S + + G
Sbjct: 217 -----------PKLKKTRLSQNQISDEGLAVFAKIPQLEEIDLSENSL---LSDAG---- 258
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+ L L L++LNL + ++DA + PL L L+L N LT+ L L +
Sbjct: 259 ----MKHLSGLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLKDMQ 314
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
KL L + +++ GL +P SLK L L +TE + + K P E+
Sbjct: 315 KLEFLHLGSTAVSDEGLKHLEPLTSLKELKLTRT-AVTEKGVAELKKKLPNTEI 367
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 160 SYMSMMPSLKFIDIS-NTDIKGFIQQV---GAETDLVLSLTALQNLNHLERLNLEQTQVS 215
S + + SLK + D G++ +V G + D +L + L+HL L L +T ++
Sbjct: 51 SEVKLAESLKTLGAKLKQDQAGYVIEVDFRGTKIDDA-ALKEIAGLSHLRSLLLNETPIT 109
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
DA L + L +L LRN SL + ++ L+ LSKL L +
Sbjct: 110 DAALESVGKVTTLENLDLRNCSLNNKAISYLTGLSKLKALRL 151
>gi|168700559|ref|ZP_02732836.1| hypothetical protein GobsU_13597 [Gemmata obscuriglobus UQM 2246]
Length = 446
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
LR ++ + T F++AG+ ++ LP L L+L T + D + +++ +L+ + +++T
Sbjct: 222 RLREIDATQTAFNAAGLEAVSA-LPVLGTLTLDATAVTDSGLKHLARARALQELSLADTP 280
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ A+T + AL + L LNLE+T V+ A EL L+L
Sbjct: 281 V--------ADT----GVAALAGVQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAETR 328
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
TD S L+ L LTNLS+ +T++GL + L LDL G
Sbjct: 329 FTDASGSHLARLPALTNLSLSGCDVTDAGLARLADLKKLANLDLTG 374
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 34/174 (19%)
Query: 10 LAWTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
+A TGV L + +L LNL + + A L K++LA T F + + L
Sbjct: 281 VADTGVAALAGVQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAETRFTDASGSHLARL 340
Query: 69 TSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 124
+L LS DV+++ L+R L +K L +LDL+ + GD + E+
Sbjct: 341 PALTNLSLSGCDVTDAGLAR---LADLKKLANLDLTGTKAGDGAAEV------------- 384
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
AG L LE++S GTQ+ D + + L+F+ + + +
Sbjct: 385 -------------AGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKV 425
>gi|149174540|ref|ZP_01853166.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148846650|gb|EDL60987.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
+L ++ L LDLS S + DD + + + +LR + L S +G+ L NL
Sbjct: 55 LVYLGRLSKLRKLDLSGSKVTDDGMVHLKSL-KSLREITLHGIPVSDSGLAEFK-KLSNL 112
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
EIL+LS T++ D + ++ + SLK + ++ +I L L L L
Sbjct: 113 EILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITAD------------GLAHLSGLKSL 160
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
E L L +TQ++D L L T K+L L LR+ +TD L Q+ L++L L +R+ +T+
Sbjct: 161 ETLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITD 220
Query: 265 SGLGSFKPPRSLKLLDLH 282
GL + ++ L+L+
Sbjct: 221 DGLKYLIKMKDMEWLELN 238
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 24/265 (9%)
Query: 45 APLAKISLAGTTFINEREAFLYIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLS 100
+ L K+ L+G+ ++ L SL L + VS+S L+ F L+ LE L+LS
Sbjct: 62 SKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKKLSN---LEILNLS 118
Query: 101 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 160
+ + D ++ + + + L+ L L+ ++ G+ L+G L +LE L LS TQI D A++
Sbjct: 119 RTKVTDAGLKHLKSLDS-LKELFLTGLEITADGLAHLSG-LKSLETLGLSETQITDDALA 176
Query: 161 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 220
++ + L+ + + +T I TD L ++ L L+RL L TQ++D L
Sbjct: 177 HLKTLKKLRVLLLRDTQI----------TDE--GLKQIKGLTRLQRLWLRNTQITDDGLK 224
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L K++ L L + +T+ + ++ L + ++++R+ +++ + S K ++L L
Sbjct: 225 YLIKMKDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLY 284
Query: 281 LHGGWLLTEDAILQFCKMHP--RIE 303
+ G +TE+ I + K P R+E
Sbjct: 285 IDGTE-ITEEGIAKLEKSLPYCRVE 308
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 165 MPSLKFIDIS-NTDIKGFIQQVG-AETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFP 221
+ SLK I + D G I QV + + LV L L L+ L +L+L ++V+D +
Sbjct: 22 IKSLKEISANLKMDYNGNISQVSFSGSKLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVH 81
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L + K L ++L ++D L + LS L L++ +T++GL K SLK L L
Sbjct: 82 LKSLKSLREITLHGIPVSDSGLAEFKKLSNLEILNLSRTKVTDAGLKHLKSLDSLKELFL 141
Query: 282 HG 283
G
Sbjct: 142 TG 143
>gi|168699408|ref|ZP_02731685.1| hypothetical protein GobsU_07802 [Gemmata obscuriglobus UQM 2246]
Length = 320
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 44/237 (18%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +K L L L+++ + D V+ +A + A+L L+L++T + AGV LA L L L
Sbjct: 93 LAPLKKLTTLQLTAAKVTDAGVKELASL-ASLTTLDLASTNVTDAGVKELA-PLTRLTAL 150
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
LSGT++ D + ++ + +L + + +T + G SL L L +L+ L
Sbjct: 151 DLSGTKVTDAGLKELAPLKNLVTLSLGSTAVTGA------------SLKELAPLTNLKTL 198
Query: 208 NLEQT------------------------QVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L T +V+DA L L+ K L L+L +T L
Sbjct: 199 HLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLTPLKNLSDLNLGGTKVTSAGL 258
Query: 244 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT------EDAILQ 294
+L++L LT L + +T++GL P +LK+L L G + T +DA+L+
Sbjct: 259 KELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFKDAVLK 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NL +L L + AG+ LA L L L L+ ++ D + ++ + SL +D+++T+
Sbjct: 74 NLTSLKLIGPVVTDAGLKALA-PLKKLTTLQLTAAKVTDAGVKELASLASLTTLDLASTN 132
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ TD + L L L L+L T+V+DA L L+ K L+ LSL + +
Sbjct: 133 V----------TDA--GVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGSTA 180
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+T SL +L+ L+ L L + D +T++GL
Sbjct: 181 VTGASLKELAPLTNLKTLHLYDTKMTDAGL 210
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L ++ L L L ++ D ++ +A + L L L+ + + AGV LA L +L L
Sbjct: 69 LAALRNLTSLKLIGPVVTDAGLKALAPL-KKLTTLQLTAAKVTDAGVKELA-SLASLTTL 126
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
L+ T + D + ++ + L +D+S T + TD L L L +L L
Sbjct: 127 DLASTNVTDAGVKELAPLTRLTALDLSGTKV----------TDA--GLKELAPLKNLVTL 174
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+L T V+ A+L L+ L L L + +TD L +L+ L+ LT L++ +T++GL
Sbjct: 175 SLGSTAVTGASLKELAPLTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGL 234
Query: 268 GSFKPPRSLKLLDLHG 283
P ++L L+L G
Sbjct: 235 KGLTPLKNLSDLNLGG 250
>gi|290993162|ref|XP_002679202.1| predicted protein [Naegleria gruberi]
gi|284092818|gb|EFC46458.1| predicted protein [Naegleria gruberi]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 79 NSSLSRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 137
N S C +++++K L L + + I D+ VE ++ + A L LN+SN S G +
Sbjct: 79 NQVGSEGCKYISELKQLTSLSIDENFIYDEGVEYLSEL-AQLTYLNISNNGVGSEGCKYV 137
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDLVL 193
G + L L +I Y+S + LK +DIS T+I KG I Q+ T L L
Sbjct: 138 -GKMKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQLSQLTSLDL 196
Query: 194 SLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
+ N L L LN+ + + + + + K+L++L + N + + +
Sbjct: 197 YCNKIGNGGAKYLSELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINNNRIGNDGVKY 256
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
+ L +LT L+I + + N G+ + L + + W+ +E A
Sbjct: 257 IGELKQLTYLNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGA 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 135/301 (44%), Gaps = 23/301 (7%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
+L++LN+ G+ E L+ ID G+E ++++ + I+E
Sbjct: 44 LKQLTYLNVPANGIWCYTTKQVKEFKQLTTLIIDQNQVGSEGCKYISELKQLTSLSIDEN 103
Query: 62 ----EAFLYI-ETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLSSSMIGDDSVEMVAC 114
E Y+ E + L++L++SN+ + S C ++ +MK L L ++ IG + + ++
Sbjct: 104 FIYDEGVEYLSELAQLTYLNISNNGVGSEGCKYVGKMKRLTSLGFYNNRIGKEGAKYIST 163
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ L+ L++S T G+ + G L L L L +I + Y+S + L +++IS
Sbjct: 164 LNQ-LKQLDISRTNIGDKGLEHI-GQLSQLTSLDLYCNKIGNGGAKYLSELKQLTYLNIS 221
Query: 175 -----NTDIKGFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFP 221
N IK +I ++ +L+++ + N L L LN+ + ++ + +
Sbjct: 222 ENHIGNEGIK-YIGELKQLVNLIINNNRIGNDGVKYIGELKQLTYLNISENRIGNEGIKY 280
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ K+L ++ + + + LS+LT+L + + N G + L L++
Sbjct: 281 IGDLKQLTNIIISRNWIGSEGAKYIGKLSQLTSLGLSSNNIDNEGAKYLSELKELSFLNI 340
Query: 282 H 282
Sbjct: 341 E 341
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ ++K L +L++S + IG++ ++ + + L N+ +S S G + G L L
Sbjct: 256 YIGELKQLTYLNISENRIGNEGIKYIGDL-KQLTNIIISRNWIGSEGAKYI-GKLSQLTS 313
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L LS ID+ Y+S + L F++I I
Sbjct: 314 LGLSSNNIDNEGAKYLSELKELSFLNIERNKI 345
>gi|406831735|ref|ZP_11091329.1| hypothetical protein SpalD1_08854 [Schlesneria paludicola DSM
18645]
Length = 422
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L ++ LE LDL + I D ++ V + L L L +TR + G+ L +L L IL
Sbjct: 196 LMSLRHLESLDLGGTSITDGALLTVGRL-QKLIQLQLPSTRITDRGLKALR-NLKQLSIL 253
Query: 148 SLSGTQIDDYAISYMSMMP--SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
LS T+I D + + +P SL D TD L ALQ+L ++
Sbjct: 254 DLSRTRIGDVGLDEIKKLPLTSLMLHDTQVTD---------------FGLLALQDLKEVQ 298
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L L + ++D L L F+ L L L + +TD L + L KL L + D+ +T++
Sbjct: 299 FLGLYKCAITDTGLVTLGRFQNLSELCLNSTRITDGGLRNVGQLRKLRILQLGDSQITDA 358
Query: 266 GLGSFKPPRSLKLLDLHGGWLLTEDAI 292
GL + +L L L G +T+D++
Sbjct: 359 GLLELRHLNNLVGLVLRGTR-VTDDSV 384
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L + L LD+S+ +I +D + + + LR L + + G+ L L +L
Sbjct: 71 LLKSLPNLTSLDVSAIVITEDGLRELGQL-KFLRRLVVDGRSITDEGLMELV-DLRSLTE 128
Query: 147 LSLSGTQIDDYAIS-YMSMMPSLKFI-DISNTD-IKGFIQQVGAETDLVLSLT------- 196
L++S T + D + + S +P L+ + D+ + + GF ++ V+ ++
Sbjct: 129 LTISATSVTDEGLKQFQSFLPQLRILSDLESVRRLAGFGGEIERSDGRVIRISLHNKPQF 188
Query: 197 ------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+L +L HLE L+L T ++D L + ++LI L L + +TD L L +L
Sbjct: 189 GDGDIESLMSLRHLESLDLGGTSITDGALLTVGRLQKLIQLQLPSTRITDRGLKALRNLK 248
Query: 251 KLTNLSIRDAVLTNSGLGSFK--PPRSLKLLD 280
+L+ L + + + GL K P SL L D
Sbjct: 249 QLSILDLSRTRIGDVGLDEIKKLPLTSLMLHD 280
>gi|356519276|ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 1 [Glycine max]
Length = 577
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L ++ LE LNL NC D ++ A L + ++ + + +FL
Sbjct: 221 GLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLK-GLQK 279
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ ++ C L ++ AL +L+L+ + D+ + ++ + NL+ LNL
Sbjct: 280 LALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRL-ENLKVLNLGFNVI 338
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + L G L LE L+L +I D + ++ + L +++S+T +VG+
Sbjct: 339 TDACLVHLKG-LTKLESLNLDSCKIGDEGLVNLAGLEQLNCLELSDT-------EVGSN- 389
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L+ L+++NL T +SD++L LS L L+L +TD L L+SL
Sbjct: 390 ----GLHHLSGLSSLQKINLSFTMISDSSLRKLSGLSSLKSLNLDAYQITDAGLANLTSL 445
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+ LT+L + A +T+ G K ++L+ L++ GG L
Sbjct: 446 TGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGVL 482
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 64/283 (22%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L LNL + +T L ++ LE LNL +C I G+E ++LAG +N
Sbjct: 328 LKVLNLGFNVITDACLVHLKGLTKLESLNLDSCKI-----GDE-----GLVNLAGLEQLN 377
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
E LS +V ++ L L+ + +L+ ++LS +MI D S+ ++ ++L
Sbjct: 378 CLE---------LSDTEVGSNGLHH---LSGLSSLQKINLSFTMISDSSLRKLS-GLSSL 424
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
++LNL + + AG+ L L L L L G +I D+ +Y+ +L+ ++I
Sbjct: 425 KSLNLDAYQITDAGLANLT-SLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICG---- 479
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
G + G + ++ L+ L LNL Q N++LT
Sbjct: 480 GVLTDAGVKN--------IKELSSLVCLNLSQ-----------------------NSNLT 508
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
D +L +S L+ L +L++ ++ +TN+GL K ++L+ L L
Sbjct: 509 DKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLE 551
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
+G+++ +L + LSG+ + D+ ++Y+ SL ++++ D I G E L
Sbjct: 123 MGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQ---ISDRGLECISGL 179
Query: 194 S-----------------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
S ++A L +L +L+LE+ L L +L L+L+
Sbjct: 180 SNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWC 239
Query: 237 S-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ +TD + LS L+ L +L I + +T+ G+ K + L LL+L G
Sbjct: 240 NCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEG 287
>gi|149175912|ref|ZP_01854530.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845359|gb|EDL59704.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 495
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 62/319 (19%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+T L ++ L+ L ++N I + L +++L GT +E + +S L+
Sbjct: 92 GLTLLRDLQGLQSLYITNNQISDAGIQQLPQVKLVELTLGGTKITDESLKH-FSNSSDLN 150
Query: 74 FLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+V +++S +++Q K LE L L + I D+ ++ + + NL++L L+ T +
Sbjct: 151 TLNVGKTAVSDRGLQYVSQFKKLERLYLHETQITDEGMQQIQGL-KNLKSLMLNETEITD 209
Query: 132 AGVGIL------------------AG-----------------------------HLPNL 144
+G+ L AG LP L
Sbjct: 210 SGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSETDITDADIKYLKELPAL 269
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
+ L L TQ+ D +S + PSL+ +D+SN I TD L + LQN
Sbjct: 270 KRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNNQI----------TDAGL-IYLLQNGKQW 318
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+NL Q++DA L L + L L N +TD L L+S++ L LS+ + +++
Sbjct: 319 SSINLSGNQITDAGLSILGKSHIELTLDLSNTEVTDAGLKYLTSMNMLFGLSLNNCQISD 378
Query: 265 SGLGSFKPPRSLKLLDLHG 283
G+ + +LK + L+G
Sbjct: 379 QGVQTLMELPALKSIQLNG 397
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 37/280 (13%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
+G+T L N+ LE L L+ I L+ E L+K+ L+ T + +L +L
Sbjct: 210 SGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSETDITDADIKYLKELPAL 269
Query: 72 LS-FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+LD + + + +LE LD+S++ I D + + G ++NLS + +
Sbjct: 270 KRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNNQITDAGLIYLLQNGKQWSSINLSGNQIT 329
Query: 131 SAGVGILAG-------HLPNLEI----------------LSLSGTQIDDYAISYMSMMPS 167
AG+ IL L N E+ LSL+ QI D + + +P+
Sbjct: 330 DAGLSILGKSHIELTLDLSNTEVTDAGLKYLTSMNMLFGLSLNNCQISDQGVQTLMELPA 389
Query: 168 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
LK I ++ TDI TD SL ++ + + L L+ T+++DA L
Sbjct: 390 LKSIQLNGTDI----------TDC--SLEIIKTKSDMLVLYLDDTKLTDAGFSQLQGLTG 437
Query: 228 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L LSL N ++TD SL + ++KL L+++ ++++ +
Sbjct: 438 LQILSLNNTAVTDASLKFFNKMTKLFELNLKQTAVSDAAV 477
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 106 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 165
DDS+ + + +L + T + G+ +L L L+ L ++ QI D I +
Sbjct: 65 DDSILVHVSKLTEVTSLWIIGTEITDQGLTLLR-DLQGLQSLYITNNQISDAGIQ---QL 120
Query: 166 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
P +K ++++ +G SL N + L LN+ +T VSD L +S F
Sbjct: 121 PQVKLVELT----------LGGTKITDESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQF 170
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
K+L L L +TD + Q+ L L +L + + +T+SGL + +
Sbjct: 171 KKLERLYLHETQITDEGMQQIQGLKNLKSLMLNETEITDSGLTALR 216
>gi|406834160|ref|ZP_11093754.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 390
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
P L LSL T+I D + Y+S +P L+ +D+S T I L LQ L
Sbjct: 114 PQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKISDA------------GLEHLQTL 161
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
+L L + +T V+DA L+ K L L++ ++TD SL +S + L L +
Sbjct: 162 VNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCN 221
Query: 262 LTNSGLGSFKPPRSLKLLDLHG 283
LT+ GL S K +SL L L G
Sbjct: 222 LTDVGLASLKDCQSLTFLSLDG 243
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+L+ + L+ LDLS + I D +E + + NL L ++ T + AG LAG L NL +
Sbjct: 133 YLSSVPRLQKLDLSRTKISDAGLEHLQTL-VNLCELTIAETSVTDAGTAKLAG-LKNLRV 190
Query: 147 LSLSGTQIDDYAISYMSMMP------------------------SLKFIDISNTDIKG-F 181
L++S T + D ++ +S +P SL F+ + + G F
Sbjct: 191 LNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDGIPLTGSF 250
Query: 182 IQQVGAETDLVLSLT----------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
++++ L+L + L +L+ L+LE V DA++ ++ L L
Sbjct: 251 LKELKGIPLEYLTLANSKCDGTTFKDVGTLKNLKMLSLENCPVEDASIASIAAIASLETL 310
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
SL N +T+ ++ +L + L +LSI ++ L K +LKL+ H
Sbjct: 311 SLDNTKITEQAIVELKDMPSLVSLSINSTPISAEELRQLKATPNLKLVKAH 361
>gi|342181851|emb|CCC91330.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 421
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT----DIKGFIQ-QVGAETDL-- 191
GHLP + L+LSGT + D + +S+ SL+ ID+ D++ Q Q E D+
Sbjct: 33 GHLPRIHTLALSGTGVIDECLCGLSLSKSLRRIDLCGCLRIKDVEPLSQIQTLEEVDVSG 92
Query: 192 ----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQL 246
V + AL L HL L T + D L LS + L+ L L N LT+V L
Sbjct: 93 CFPCVCGIGALGKLPHLRYLKATLTGIRDECLVRLSVSRCLVKLLLSNCERLTNV--QCL 150
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW------------LLTEDAILQ 294
+ ++ L L + D V G+G SLK LD+ G L E IL+
Sbjct: 151 ARITSLEELDLSDCVNVTEGIGDLGRLPSLKSLDISGTGTSDVDLCGICKSLCIEKLILK 210
Query: 295 FCKM 298
CK+
Sbjct: 211 RCKL 214
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 111/270 (41%), Gaps = 38/270 (14%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
PR+ L L+ TGV ID L G L +I L G I +
Sbjct: 35 LPRIHTLALSGTGV------------------IDECLCGLSLSKSLRRIDLCGCLRIKDV 76
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD-LSSSMIG-DDSVEMVACVGANL 119
E I+T L +DVS C + + L HL L +++ G D + V L
Sbjct: 77 EPLSQIQT--LEEVDVSGC-FPCVCGIGALGKLPHLRYLKATLTGIRDECLVRLSVSRCL 133
Query: 120 RNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT-- 176
L LSN R ++ V LA + +LE L LS I + +PSLK +DIS T
Sbjct: 134 VKLLLSNCERLTN--VQCLA-RITSLEELDLSDCVNVTEGIGDLGRLPSLKSLDISGTGT 190
Query: 177 ---DIKGFIQQVGAE------TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
D+ G + + E L+ + LQNL L+ +N+ + S E
Sbjct: 191 SDVDLCGICKSLCIEKLILKRCKLITDVFCLQNLPTLQHVNIGECSNIIEGFGVFSVLPE 250
Query: 228 LIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L L + + ++TD L +S + L +L+I
Sbjct: 251 LRTLYVHHTAVTDNDLRAISMSNSLVSLNI 280
>gi|225463572|ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
gi|297743556|emb|CBI36423.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 102 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 161
SM+ DD E A NLR LNL + A + L G L NLE L+L +I D ++
Sbjct: 313 SMLSDDGCENFA-RQENLRVLNLGFNDLTDACLVHLKG-LTNLESLNLDSCRICDEGLAN 370
Query: 162 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 221
++ + LK +++S+T +VG+ L L L +LE +NL T V+D+ L
Sbjct: 371 LTGLRHLKCLELSDT-------EVGSN-----GLRHLSGLANLESINLSFTAVTDSGLRK 418
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
LS L L+L +TD L L+SL+ LT+L + A +T+SG + ++L+ L++
Sbjct: 419 LSALSSLKSLNLDARQITDAGLAALTSLTGLTHLDLFGARITDSGTSYLRNFKNLQSLEI 478
Query: 282 HGGWL 286
GG L
Sbjct: 479 CGGGL 483
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 41/295 (13%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
GV L + L LN+ C + + + + P + +++ + L
Sbjct: 271 GVAYLKGLHKLALLNMEGCPVTAACLESLSDLPSLLSLNLNRSMLSDDGCENFARQENLR 330
Query: 74 FLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L++ + L+ C L + LE L+L S I D+ + + + +L+ L LS+T S
Sbjct: 331 VLNLGFNDLTDACLVHLKGLTNLESLNLDSCRICDEGLANLTGL-RHLKCLELSDTEVGS 389
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G+ L+G L NLE ++LS T + D + +S + SLK +++ I TD
Sbjct: 390 NGLRHLSG-LANLESINLSFTAVTDSGLRKLSALSSLKSLNLDARQI----------TDA 438
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL------------------ 233
L AL +L L L+L +++D+ L FK L L +
Sbjct: 439 --GLAALTSLTGLTHLDLFGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTC 496
Query: 234 -------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+N +LTD SL +S L+ L +LS+ ++ +TN+GL K ++LK L L
Sbjct: 497 LTVLNLSQNCNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTL 551
>gi|226534362|gb|ACO71457.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINE 60
F LS+LNL+WT VT+ PNI LECL+++ C I SIL+ + + A L K+ L+G TF E
Sbjct: 26 FSNLSYLNLSWTSVTQTPNIPHLECLHMNKCDIVSILKTHSSALASLKKLVLSGATFSAE 85
Query: 61 REAF 64
E+F
Sbjct: 86 TESF 89
>gi|406835528|ref|ZP_11095122.1| hypothetical protein SpalD1_27934 [Schlesneria paludicola DSM
18645]
Length = 590
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 33/275 (12%)
Query: 8 LNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTF---- 57
LNL+ T +T L +++LE + L N +I D+ ++ + LA+++L+ T
Sbjct: 104 LNLSDTRITDRGLFHLKRLTNLETVWLQNTSITDAGIKELASFERLAELNLSDTRITDRG 163
Query: 58 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS------SSMIGDDSVEM 111
+ E F + T L +++++ L L ++K + LDLS + I D+ +E
Sbjct: 164 LRELSDFQNLTTLWLQNVEMTDDGLQ---ALKRLKTITTLDLSNLNGLNTIRITDEGLEQ 220
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
++ + LR+L L+N + +G+ L L +L +L L GTQI D ++ + + L+
Sbjct: 221 LSDL-PELRHLYLANIPIADSGLTSLR-RLKHLTVLDLRGTQITDEGLNELRGLHELETF 278
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
++ T I LTAL+ L +L L + Q++ L L+ +L L
Sbjct: 279 KLTKTQISDA------------GLTALKGLKNLTTLLIGSNQITGTGLQELTNLDQLKTL 326
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L + +TDV L++LSS+ LT+L + D +T+ G
Sbjct: 327 DLSDTQVTDVELNRLSSIRTLTDLRLSDTPITDVG 361
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 23/280 (8%)
Query: 2 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
+L L+L+ T VT +L +I +L L LS+ I + + + + G T
Sbjct: 320 LDQLKTLDLSDTQVTDVELNRLSSIRTLTDLRLSDTPITDVGLRSLRELKRLRRLTLGGT 379
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVAC 114
I + ++ L+ LD+ + ++ L +K L L+L ++ + D S+ + C
Sbjct: 380 QITDISELNHLRD--LTHLDLRVTPITDTGLHGLGDLKHLTSLNLDATQVTDASLSELKC 437
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ +L+ L+LS T S G L L L +L I D + + + SLK + IS
Sbjct: 438 L-VHLKELSLSRTAISGLGFKSLE-RLEQLTVLRCDRCLIADEGLREICTLKSLKTLVIS 495
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
T + L L L L+ L +E ++DA + L +L L +
Sbjct: 496 GTRVTDD------------GLAELHQLEGLQELRIENNALTDAGMSELMVLGKLRTLGIS 543
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 274
+ +TD SL + L LT L IR+ +T+SGL FK R
Sbjct: 544 HNKITDTSLSDIKRLKNLTMLRIRNTEITDSGLNGFKDAR 583
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
++F + S L L LDL + I D ++ +A + +L NLNLS+TR +
Sbjct: 55 IAFEEAHKFSEKHLHLLKPFSDLSDLDLHAIPILDRDLKELADL-TSLVNLNLSDTRITD 113
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G+ L L NLE + L T I D I ++ L +++S+T I TD
Sbjct: 114 RGLFHLK-RLTNLETVWLQNTSITDAGIKELASFERLAELNLSDTRI----------TD- 161
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS------LTDVSLHQ 245
L L + +L L L+ +++D L L K + L L N + +TD L Q
Sbjct: 162 -RGLRELSDFQNLTTLWLQNVEMTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQ 220
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
LS L +L +L + + + +SGL S + + L +LDL G +T++ + + +H
Sbjct: 221 LSDLPELRHLYLANIPIADSGLTSLRRLKHLTVLDLRGTQ-ITDEGLNELRGLH 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 142/313 (45%), Gaps = 39/313 (12%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG-NE---------NKAPLAKISLAG 54
L+ + +A +G+T L + L L+L I EG NE K +IS AG
Sbjct: 232 LANIPIADSGLTSLRRLKHLTVLDLRGTQITD--EGLNELRGLHELETFKLTKTQISDAG 289
Query: 55 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 114
T + + + T L+ ++ + L L Q+K L DLS + + D + ++
Sbjct: 290 LTAL---KGLKNLTTLLIGSNQITGTGLQELTNLDQLKTL---DLSDTQVTDVELNRLSS 343
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ L +L LS+T + G+ L L L L+L GTQI D IS ++ + L +D+
Sbjct: 344 I-RTLTDLRLSDTPITDVGLRSLR-ELKRLRRLTLGGTQITD--ISELNHLRDLTHLDLR 399
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
T I TD L L +L HL LNL+ TQV+DA+L L L LSL
Sbjct: 400 VTPI----------TDT--GLHGLGDLKHLTSLNLDATQVTDASLSELKCLVHLKELSLS 447
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 294
+++ + L L +LT L ++ + GL +SLK L + G +T+D + +
Sbjct: 448 RTAISGLGFKSLERLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTR-VTDDGLAE 506
Query: 295 FCKMHP----RIE 303
++ RIE
Sbjct: 507 LHQLEGLQELRIE 519
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+L +L+L T + G+ L G L +L L+L TQ+ D ++S + + LK + +S T
Sbjct: 392 DLTHLDLRVTPITDTGLHGL-GDLKHLTSLNLDATQVTDASLSELKCLVHLKELSLSRTA 450
Query: 178 IKGF-------IQQVGA-ETDLVL----SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
I G ++Q+ D L L + L L+ L + T+V+D L L
Sbjct: 451 ISGLGFKSLERLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTRVTDDGLAELHQL 510
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 285
+ L L + N +LTD + +L L KL L I +T++ L K ++L +L +
Sbjct: 511 EGLQELRIENNALTDAGMSELMVLGKLRTLGISHNKITDTSLSDIKRLKNLTMLRIRNTE 570
Query: 286 LLTEDAILQFCKMHPRIEVW 305
+T+ + F P + ++
Sbjct: 571 -ITDSGLNGFKDARPNVSIF 589
>gi|326497793|dbj|BAJ98524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 583
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 23/296 (7%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER- 61
+LS + GV+ L +S L LNL +C + + LE A L ++L +E
Sbjct: 266 QLSSCRITDLGVSYLTGLSKLTHLNLESCPVTAACLEAISGLASLMLLNLNRCGIYDEGC 325
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
E+F ++ L L++ + ++ C L + LE L+L S IGD+ + + L
Sbjct: 326 ESFEDLKK--LKVLNLGFNHITDACLVHLKGLINLESLNLDSCKIGDEGLLHLK-GLVLL 382
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---T 176
++L LS+T S G+ L+G L NL ++LS T + D + +S + SLK +++ N T
Sbjct: 383 KSLELSDTAIGSNGLQHLSG-LRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNRLIT 441
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNH----------LERLNLEQTQVSDATLFPLSTFK 226
D+ G +G L L + +H LE L + ++DA + + K
Sbjct: 442 DV-GLAALIGLTGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCGGSITDAGVKNIKDLK 500
Query: 227 ELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L+L +NA LTD +L +S L+ L +L++ ++ ++N+G K ++L+ L L
Sbjct: 501 ALTLLNLSQNAKLTDKTLELISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTL 556
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 19/275 (6%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ + + LE LN+ C DS ++ + L ++ L+ + ++L S
Sbjct: 227 GLVHMKGLRKLESLNMRYCNYITDSDIKYLSDLTNLKELQLSSCRITDLGVSYL-TGLSK 285
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ + ++ C ++ + +L L+L+ I D+ E + L+ LNL
Sbjct: 286 LTHLNLESCPVTAACLEAISGLASLMLLNLNRCGIYDEGCESFEDL-KKLKVLNLGFNHI 344
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ A + L G L NLE L+L +I D + ++ + LK +++S+T I G+
Sbjct: 345 TDACLVHLKG-LINLESLNLDSCKIGDEGLLHLKGLVLLKSLELSDTAI-------GSN- 395
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
L L L +L +NL T V+D + +ST L ++L N +TDV L L L
Sbjct: 396 ----GLQHLSGLRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNRLITDVGLAALIGL 451
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
+ LT+L + A +T+ G + ++L+ L++ GG
Sbjct: 452 TGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCGG 486
>gi|301098037|ref|XP_002898112.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105473|gb|EEY63525.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 16/232 (6%)
Query: 49 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGD 106
++ L G T E +A + + L L++ + + F F++++K LE L+++ + + D
Sbjct: 400 EVLLLGYTAFAESDAAVLQYLTKLQELELRKCRIMKRGFQFISRLKHLERLEVAETALTD 459
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ + NL+ LN+SNT S +G L L L IL L + I + A++ +S +P
Sbjct: 460 SRLLEICNNAINLKALNVSNTEISDSGTTGLT-KLKELRILGLDTSGITNRALANLSFLP 518
Query: 167 SLKFIDISNTDI--KGFIQQVGAETDLVLSLTA----------LQNLNHLERLNLEQTQ- 213
L+ +D+ +I G + + L++ + L L LNL Q +
Sbjct: 519 QLERLDLFGANITDNGLMHLIPLHKLQELAICGGNIGDRGVGLISKLTSLTSLNLSQNRN 578
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
+ +LF L + L L+L N ++ +SL LS L +L +LS+ L+
Sbjct: 579 IRTKSLFYLRSLTSLRCLNLSNTGISALSLRHLSPLKELQSLSVYGCSLSQG 630
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 27/279 (9%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
GV +L ++ LE L L C D G + P + ++ER +
Sbjct: 293 GVKRLFKLTKLEKLRLGRCRKLTDDAFGGFVDSFPKLRELDVSNCRLSERAMQHIGQVKS 352
Query: 72 LSFL------DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
L L D+S+ ++ LT +K + + G + + L L L
Sbjct: 353 LEVLVIRGCQDISDVGMASLAELTNLKYFD-----ARHCG--KIHSIPTEWTQLEVLLLG 405
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
T F+ + +L +L L+ L L +I ++S + L+ ++++ T
Sbjct: 406 YTAFAESDAAVLQ-YLTKLQELELRKCRIMKRGFQFISRLKHLERLEVAET--------- 455
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
A TD L L N +L+ LN+ T++SD+ L+ KEL L L + +T+ +L
Sbjct: 456 -ALTDSRL-LEICNNAINLKALNVSNTEISDSGTTGLTKLKELRILGLDTSGITNRALAN 513
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
LS L +L L + A +T++GL P L+ L + GG
Sbjct: 514 LSFLPQLERLDLFGANITDNGLMHLIPLHKLQELAICGG 552
>gi|87309591|ref|ZP_01091725.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
gi|87287355|gb|EAQ79255.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
Length = 328
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 43/225 (19%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--------- 138
L +++L+ L+L+ S + D S+E++ + LR+L L T +SAGV LA
Sbjct: 88 LVMLQSLQRLNLNQSGVTDKSLEIMGAL-PELRSLYLERTAVTSAGVAALASCEKLEELM 146
Query: 139 --------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQ 183
G LP L +LSLS T I D + ++ +P LK + + +T + G
Sbjct: 147 LTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDTAVTGEGFA 206
Query: 184 QVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVSDATLFP-----LSTFK- 226
+ + TDL L ++ L++ +LERL L +T ++D L P L F
Sbjct: 207 MLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTSLTDE-LLPEFIDTLIRFNP 265
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
L L++ +TD SL L L++L +L++ D T G+F+
Sbjct: 266 HLRGLAIMEVPITDNSLTPLKRLAELPDLAVVDFRETGVTRGAFQ 310
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
L +L+ L+L+ + + D ++ M +P L+ + + T + + AL +
Sbjct: 91 LQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTAVTS------------AGVAALAS 138
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
LE L L + + D L + L LSL +TD + L SL L L +RD
Sbjct: 139 CEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDT 198
Query: 261 VLTNSGLGSFKPPRSLKLLDL 281
+T G K L+L+DL
Sbjct: 199 AVTGEGFAMLKSSTDLRLIDL 219
>gi|356519278|ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 2 [Glycine max]
Length = 529
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L+++ +L+ L++SSS + D + + + L LNL ++A + LA LP L L
Sbjct: 250 LSELASLKSLEISSSKVTDFGISFLKGL-QKLALLNLEGCLVTAACLDSLA-ELPALSNL 307
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+L+ + D +S + +LK +++ GF A L L+ L LE L
Sbjct: 308 NLNRCNLSDNGCKKISRLENLKVLNL------GFNVITDA------CLVHLKGLTKLESL 355
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
NL+ ++ D L L+ ++L L L + + LH LS L+ LT+L + A +T+ G
Sbjct: 356 NLDSCKIGDEGLVNLAGLEQLNCLELSDTEVGSNGLHHLSGLTGLTDLDLFGARITDFGT 415
Query: 268 GSFKPPRSLKLLDLHGGWL 286
K ++L+ L++ GG L
Sbjct: 416 NYLKKFKNLRSLEICGGVL 434
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 68 ETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
E + L L++S+S ++ F FL ++ L L+L ++ ++ +A + A L NLNL+
Sbjct: 252 ELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPA-LSNLNLN 310
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
S G ++ L NL++L+L I D + ++ + L+ +++ + ++
Sbjct: 311 RCNLSDNGCKKIS-RLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDSC-------KI 362
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
G E +++L L+ LN LE L T+V L LS L L L A +TD +
Sbjct: 363 GDEG--LVNLAGLEQLNCLE---LSDTEVGSNGLHHLSGLTGLTDLDLFGARITDFGTNY 417
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L +L I VLT++G+ + K SL L+L
Sbjct: 418 LKKFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNL 453
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 139/286 (48%), Gaps = 20/286 (6%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L ++ LE LNL NC D ++ A L + ++ + + +FL
Sbjct: 221 GLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLK-GLQK 279
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ ++ C L ++ AL +L+L+ + D+ + ++ + NL+ LNL
Sbjct: 280 LALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRL-ENLKVLNLGFNVI 338
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV 185
+ A + L G L LE L+L +I D + ++ + L +++S+T++ + +
Sbjct: 339 TDACLVHLKG-LTKLESLNLDSCKIGDEGLVNLAGLEQLNCLELSDTEVGSNGLHHLSGL 397
Query: 186 GAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNA 236
TDL L L+ +L L + ++DA + + L+ L+L +N+
Sbjct: 398 TGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNLSQNS 457
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+LTD +L +S L+ L +L++ ++ +TN+GL K ++L+ L L
Sbjct: 458 NLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLE 503
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
+G+++ +L + LSG+ + D+ ++Y+ SL ++++ D I G E L
Sbjct: 123 MGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQ---ISDRGLECISGL 179
Query: 194 S-----------------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
S ++A L +L +L+LE+ L L +L L+L+
Sbjct: 180 SNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWC 239
Query: 237 S-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ +TD + LS L+ L +L I + +T+ G+ K + L LL+L G
Sbjct: 240 NCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEG 287
>gi|384254255|gb|EIE27729.1| RNI-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 515
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 16/193 (8%)
Query: 91 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
MK LE+LDLS S I D V+ +A + A + L LS T + +G+ L + L L L
Sbjct: 166 MKQLENLDLSWCSGITDADVKALAALTA-ITGLQLSRTLVADSGIFALR-SMSRLRCLGL 223
Query: 150 SG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
+G + I + A+ +S + SL+ +++ + V L+ L L L LN
Sbjct: 224 AGCSGISNGAVGSVSALTSLEELNLEWCTVS------------VKGLSHLSTLTELRSLN 271
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
+ T D L ++ L L+L + ++D LH +S L+ L ++++ D +T+ G+
Sbjct: 272 VAYTTAGDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQGMI 331
Query: 269 SFKPPRSLKLLDL 281
+F P + ++ L+L
Sbjct: 332 AFAPLKGMQRLNL 344
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 64/306 (20%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
+G+ L ++S L CL L+ C+ G N A + A +E L
Sbjct: 207 SGIFALRSMSRLRCLGLAGCS------GISNGA------------VGSVSALTSLEELNL 248
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
+ VS LS LT++++L +++ + GD+++ + NLR LNL + S
Sbjct: 249 EWCTVSVKGLSHLSTLTELRSL---NVAYTTAGDNALAAWTSL-TNLRTLNLDSCPVSDR 304
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-----FIQQVGA 187
G+ ++ L NLE ++LS T I D + + + ++ +++S T G + ++ A
Sbjct: 305 GLHHIS-ELTNLEDVNLSDTAITDQGMIAFAPLKGMQRLNLSYTAGVGDLGLAAVARLTA 363
Query: 188 ETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF-------------- 225
T+L L L + L L+ L+L +++DA L F
Sbjct: 364 LTELHLDGRSFTDVGLRTIAPLTQLQTLDLFGARITDAGCVHLRPFRRLERLEICGGGIS 423
Query: 226 ----KELI------HLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 274
KELI HLSL +NA +TD + LS LS+L L++ LT +G+ P R
Sbjct: 424 DEGVKELIWLTGLQHLSLAQNARITDRASLFLSGLSQLRGLNLTGTQLTGNGI---LPLR 480
Query: 275 SLKLLD 280
SL L+
Sbjct: 481 SLTNLE 486
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 5 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFI 58
L LNL W G++ L ++ L LN++ T D+ L + L ++L + +
Sbjct: 243 LEELNLEWCTVSVKGLSHLSTLTELRSLNVAYTTAGDNALAAWTSLTNLRTLNLD-SCPV 301
Query: 59 NEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLS-SSMIGDDSVEMVACV 115
++R E + L +++S+++++ +K ++ L+LS ++ +GD + VA +
Sbjct: 302 SDRGLHHISELTNLEDVNLSDTAITDQGMIAFAPLKGMQRLNLSYTAGVGDLGLAAVARL 361
Query: 116 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-- 173
A L L+L F+ G+ +A L L+ L L G +I D ++ L+ ++I
Sbjct: 362 TA-LTELHLDGRSFTDVGLRTIA-PLTQLQTLDLFGARITDAGCVHLRPFRRLERLEICG 419
Query: 174 ---SNTDIKGFIQQVGAETDLVLSLTA---------LQNLNHLERLNLEQTQVSDATLFP 221
S+ +K I G + L L+ A L L+ L LNL TQ++ + P
Sbjct: 420 GGISDEGVKELIWLTGLQ-HLSLAQNARITDRASLFLSGLSQLRGLNLTGTQLTGNGILP 478
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSL 249
L + L L L+ + + +L L
Sbjct: 479 LRSLTNLESLCLKRTRVKQAAADRLQPL 506
>gi|217074604|gb|ACJ85662.1| unknown [Medicago truncatula]
Length = 331
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
LS L+V S++ CF ++ + AL L+L+ + DD E + + L+ L+L+ +
Sbjct: 34 LSTLNVEGCSITAACFEYISALAALACLNLNRCGLSDDGFEKFSGL-TGLKRLSLAFNKI 92
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV 185
+ A + L G L LE L+L QI D + ++ + LK + +S+T++ +I +
Sbjct: 93 TDACLVHLKG-LTKLEYLNLDSCQIGDEGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGL 151
Query: 186 GAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
DL LS T++ + L +L+ LNL+ Q++DA L L++ LI L L A
Sbjct: 152 NKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDLFGAR 211
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+TD L S L +L I +LT++G+ + + SL L+L LT+ +
Sbjct: 212 ITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTL 266
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 64/283 (22%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L L+LA+ +T L ++ LE LNL +C I G+E L ++L
Sbjct: 82 LKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQI-----GDEGLVNLTGLTL------- 129
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
+++ +LS +V NS + +++ + LE L+LS + + D+ ++ + + NL
Sbjct: 130 -------LKSLVLSDTEVGNSGIR---YISGLNKLEDLNLSFTSVTDNGLKRLLGL-TNL 178
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
++LNL + + AG+ L L L L L G +I D +Y+ +L+ ++I
Sbjct: 179 KSLNLDARQITDAGLANLT-SLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICG---- 233
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
G + G + ++ + L +LNL Q N LT
Sbjct: 234 GLLTDAGVKN--------IREIVSLTQLNLSQ-----------------------NCKLT 262
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
D +L +S ++ L +L++ ++ +TN GL KP ++L+ L L
Sbjct: 263 DKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLE 305
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 60/234 (25%)
Query: 118 NLRNLNLSNTRFSSAGVGILAG-------------------------------------- 139
NL+ L +SN+ + G+ L G
Sbjct: 9 NLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSITAACFEYISALAALACLNLNRCGL 68
Query: 140 ---------HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAE 188
L L+ LSL+ +I D + ++ + L+++++ + I +G + G
Sbjct: 69 SDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGDEGLVNLTGLT 128
Query: 189 --TDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
LVLS T + N LN LE LNL T V+D L L L L+L +
Sbjct: 129 LLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQI 188
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
TD L L+SLS L L + A +T+SG + ++L+ L++ GG LLT+ +
Sbjct: 189 TDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGG-LLTDAGV 241
>gi|290980573|ref|XP_002673006.1| predicted protein [Naegleria gruberi]
gi|284086587|gb|EFC40262.1| predicted protein [Naegleria gruberi]
Length = 361
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 72 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ LDVS + + +LTQ+ L L + ++ I DD ++M++ + L L+LSN R
Sbjct: 140 LTILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEM-KQLTKLDLSNCRI 198
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
GV L+ L NL L L G ++ D + +S + L + I Q+G E
Sbjct: 199 MD-GVQYLS-KLENLTSLRLCGNRLTDERVESISNLKQLTELYIGEN-------QLGTE- 248
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
++ N+ L RLN++Q ++S + L L L++ + D + +S +
Sbjct: 249 ----GAKSIGNMTQLTRLNIQQNRISQGVKY-LEKLDRLTDLNISKNKIGDTGVIIISEM 303
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++LT L+IRD ++ G + + L LD+
Sbjct: 304 NQLTKLTIRDNKISEEGAKTLGLLQKLTYLDI 335
>gi|226505324|ref|NP_001147302.1| regulatory subunit [Zea mays]
gi|195609698|gb|ACG26679.1| regulatory subunit [Zea mays]
gi|413937767|gb|AFW72318.1| regulatory subunit isoform 1 [Zea mays]
gi|413937768|gb|AFW72319.1| regulatory subunit isoform 2 [Zea mays]
Length = 582
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 39/219 (17%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L ++ +LE L+L S IGDD + + + L++L LS+T + G+ L+G L NL+ +
Sbjct: 351 LKELISLESLNLDSCKIGDDGLSHLKGL-VLLQSLELSDTEVGNNGLQHLSG-LRNLQSI 408
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+LS T + D + +S++ SLK +++ N I TD+ L AL +L L L
Sbjct: 409 NLSFTLVTDIGVKKISVLNSLKSVNLDNRQI----------TDV--GLAALISLTRLTHL 456
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSL-------------------------RNASLTDVS 242
+L ++D FK L+ L + +NA+LTD +
Sbjct: 457 DLFGACITDNGTNCFRYFKNLVSLEVCGGFVTDAGVKNIKDLKALTLLNLSQNANLTDKT 516
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L +S L+ L NL++ ++ ++N+GL +L+ L L
Sbjct: 517 LELISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSL 555
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
L +LE L+L +I D +S++ + L+ +++S+T +VG L L
Sbjct: 353 ELISLESLNLDSCKIGDDGLSHLKGLVLLQSLELSDT-------EVGNN-----GLQHLS 400
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
L +L+ +NL T V+D + +S L ++L N +TDV L L SL++LT+L +
Sbjct: 401 GLRNLQSINLSFTLVTDIGVKKISVLNSLKSVNLDNRQITDVGLAALISLTRLTHLDLFG 460
Query: 260 AVLTNSGLGSFKPPRSLKLLDLHGGWL 286
A +T++G F+ ++L L++ GG++
Sbjct: 461 ACITDNGTNCFRYFKNLVSLEVCGGFV 487
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 54/271 (19%)
Query: 2 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
RL LNL + +T L + SLE LNL +C I G
Sbjct: 330 LKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKI-------------------GDD 370
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
++ + + +++ LS +V N+ L L+ ++ L+ ++LS +++ D V+ ++ +
Sbjct: 371 GLSHLKGLVLLQSLELSDTEVGNNGLQH---LSGLRNLQSINLSFTLVTDIGVKKISVLN 427
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+ L+++NL N + + G+ L L L L L G I D + +L +++
Sbjct: 428 S-LKSVNLDNRQITDVGLAALI-SLTRLTHLDLFGACITDNGTNCFRYFKNLVSLEVCG- 484
Query: 177 DIKGFIQQVGAE-------------------TDLVLSLTALQNLNHLERLNLEQTQVSDA 217
GF+ G + TD L L + L L LN+ ++VS+A
Sbjct: 485 ---GFVTDAGVKNIKDLKALTLLNLSQNANLTDKTLEL--ISGLTALINLNVSNSRVSNA 539
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L L+ L LSL + +T + +L +
Sbjct: 540 GLKHLNDLHNLRSLSLDSTRVTANEMRKLRA 570
>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
Length = 548
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 29/266 (10%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
LS + + GV L + +L+ LNL N I +G E L + T ++ R
Sbjct: 242 LSGNQIGYEGVNNLSELKNLKKLNLGNNRITG--DGAERLCGLENL-----TELDLRAEH 294
Query: 65 LYIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
L +L L + + R C LT L L+L S++IG E + C NL
Sbjct: 295 LSQLKNLTQINLCLNQIGPNGAERLCELTN---LTQLNLRSNLIGAIKAESL-CKLENLT 350
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L R G L+ L L L LSG QI +S + +L +D++ I+
Sbjct: 351 QLDLGYNRIEDDGAQRLS-KLKKLTQLDLSGNQIGSIGAQSLSELTNLTHLDLNGNGIED 409
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
Q L L L RL L ++ D LS +L HLSL N + D
Sbjct: 410 GAQH-------------LSKLKKLTRLGLNDNRIGDDGAKYLSELNKLTHLSLDNNGIGD 456
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSG 266
LS L +T LS+ D + +G
Sbjct: 457 TGAECLSKLKNITYLSLDDNEIETAG 482
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L+ + L L+L ++ IGD E ++ + NL LNL T+ + GV L G L L L
Sbjct: 183 LSSLTNLTQLNLGNNEIGDAGAEHISSL-TNLTQLNLRITKLGANGVKSLRG-LKKLTEL 240
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--------TDLVLSLTALQ 199
LSG QI ++ +S + +LK +++ N I G GAE T+L L L
Sbjct: 241 DLSGNQIGYEGVNNLSELKNLKKLNLGNNRITGD----GAERLCGLENLTELDLRAEHLS 296
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN--------------ASLTDVSL-- 243
L +L ++NL Q+ L L L+LR+ +LT + L
Sbjct: 297 QLKNLTQINLCLNQIGPNGAERLCELTNLTQLNLRSNLIGAIKAESLCKLENLTQLDLGY 356
Query: 244 --------HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 295
+LS L KLT L + + + G S +L LDL+G + ED
Sbjct: 357 NRIEDDGAQRLSKLKKLTQLDLSGNQIGSIGAQSLSELTNLTHLDLNGNGI--EDGAQHL 414
Query: 296 CKM 298
K+
Sbjct: 415 SKL 417
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
G ++ L NL L L +I + +S + +LK +++ + +I GA+ V
Sbjct: 107 CGTISTKLVNLTQLDLCRNKIKPTVVKGLSSLTNLKKLNLGHNEIG----NDGAKH--VS 160
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
SLT HL L+L + LS+ L L+L N + D +SSL+ LT
Sbjct: 161 SLT------HLTALDLFDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGAEHISSLTNLT 214
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L++R L +G+ S + + L LDL G
Sbjct: 215 QLNLRITKLGANGVKSLRGLKKLTELDLSG 244
>gi|13507547|gb|AAK28636.1|AF360339_1 unknown protein [Arabidopsis thaliana]
Length = 585
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
LT + L +L+L+ D E + + NL+ LNL +++ + L G L LE L
Sbjct: 306 LTALAGLMYLNLNRCNFSDSGCEKFSDL-INLKILNLGMNNITNSCLVHLKG-LTKLESL 363
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAET--DLVLSLTA------ 197
+L +I D + ++S M LK +++S+T++ G G + LS T
Sbjct: 364 NLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGL 423
Query: 198 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L
Sbjct: 424 RKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSL 483
Query: 256 SIRDAVLTNSGLGSFK 271
I LT++G+ + K
Sbjct: 484 EICGGGLTDTGVKNIK 499
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 44/241 (18%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+++NS L LT+ LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 345 NITNSCLVHLKGLTK---LESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGLR 400
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS- 194
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 401 HLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLSA 449
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL--------------------- 233
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 450 LTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTL 506
Query: 234 ----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L L
Sbjct: 507 LNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCKLSAN 566
Query: 290 D 290
D
Sbjct: 567 D 567
>gi|46447144|ref|YP_008509.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400785|emb|CAF24234.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 670
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 36/291 (12%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYI 67
NL TG+ L ++ +L+ LNL+NC N A LA ++ L ++N + +
Sbjct: 353 NLTDTGLAHLKSLINLQHLNLNNC--------NFTDAGLAHLTPLVTLKYLNLSQCYNLT 404
Query: 68 ETSL-----------LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ L L+ D +N + + +L+ + L+HL+L+ + D + + +
Sbjct: 405 DAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPL- 463
Query: 117 ANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS 174
NL+ LNLS T + AG+ L+ L L+ L L G ++ D +++++ + +LK++++S
Sbjct: 464 VNLQQLNLSYCTNLTDAGLAHLST-LVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLS 522
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
GA + L AL++L+ +LE DA L L+ L +L L
Sbjct: 523 CCH-----NLTGAGLAHLTPLVALKHLDLSWNGDLE-----DAGLAHLTPLVALKYLDLS 572
Query: 235 NA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 283
LTD L L SL L +L +R LT++G+ P +LK LDL G
Sbjct: 573 ECYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKG 623
>gi|30684506|ref|NP_563980.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|23297087|gb|AAN13089.1| unknown protein [Arabidopsis thaliana]
gi|332191234|gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 585
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
LT + L +L+L+ D E + + NL+ LNL +++ + L G L LE L
Sbjct: 306 LTALAGLMYLNLNRCNFSDSGCEKFSDL-INLKILNLGMNNITNSCLVHLKG-LTKLESL 363
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAET--DLVLSLTA------ 197
+L +I D + ++S M LK +++S+T++ G G + LS T
Sbjct: 364 NLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGL 423
Query: 198 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L
Sbjct: 424 RKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSL 483
Query: 256 SIRDAVLTNSGLGSFK 271
I LT++G+ + K
Sbjct: 484 EICGGGLTDTGVKNIK 499
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 44/241 (18%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+++NS L LT+ LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 345 NITNSCLVHLKGLTK---LESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGLR 400
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS- 194
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 401 HLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLSA 449
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL--------------------- 233
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 450 LTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTL 506
Query: 234 ----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L L
Sbjct: 507 LNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCKLSAN 566
Query: 290 D 290
D
Sbjct: 567 D 567
>gi|320163275|gb|EFW40174.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 989
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 28/237 (11%)
Query: 2 FPRLSFLNLAW---TGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTF 57
FP+L L +A T V +L N L LNL+ I + L+ L +SLA T
Sbjct: 609 FPQLRTLAIAGLPLTDVGRLSNFPELRSLNLARTAIVEGKLDSIRRYIHLVHLSLANTKL 668
Query: 58 INEREAFLYIETSLLSF-----LDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEM 111
+ +L T+L S + NSS++ L L LDL+ + + D+ ++
Sbjct: 669 GDNDVRYLQYLTNLSSLKLPSRFQIGNSSIAHISKL----PLTELDLTDYIHVTDEGIQF 724
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
++ + L +L+LSNT+ +SAG+ +A LE+L L T + D I ++ + L+ +
Sbjct: 725 ISALAPTLVSLSLSNTKLTSAGIPAVAA-CTKLEVLQLDRTPLKDDVIPLLAPLTRLRTL 783
Query: 172 DISNTDIKGFIQQVGAET------DLVLSLTALQN-------LNHLERLNLEQTQVS 215
+S T + + + GA + L LS T ++N L L LNL+ T+V+
Sbjct: 784 SLSRTHLTSAVVRSGAFSPFTRLESLNLSWTFIENQGLDQLRLPMLTTLNLDSTRVT 840
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 40/162 (24%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQID 155
L+L ++I D + +A +GA L++L++S+ ++ + G+ +LA P L L+++G
Sbjct: 565 LNLERTLITDSGLARLAPLGATLQHLDISDCSKLTERGLALLAA-FPQLRTLAIAG---- 619
Query: 156 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 215
L D+ L N L LNL +T +
Sbjct: 620 ------------LPLTDVGR----------------------LSNFPELRSLNLARTAIV 645
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ L + + L+HLSL N L D + L L+ L++L +
Sbjct: 646 EGKLDSIRRYIHLVHLSLANTKLGDNDVRYLQYLTNLSSLKL 687
>gi|226534342|gb|ACO71447.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534344|gb|ACO71448.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534348|gb|ACO71450.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534352|gb|ACO71452.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534354|gb|ACO71453.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534356|gb|ACO71454.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534358|gb|ACO71455.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534360|gb|ACO71456.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534364|gb|ACO71458.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534366|gb|ACO71459.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINE 60
F LSFLNL+WT VT+ PNI LECL+++ C I SI + + + A L K+ L+G TF E
Sbjct: 26 FSNLSFLNLSWTSVTQTPNIPHLECLHMNKCDIVSISKTHSSALASLKKLVLSGATFSAE 85
Query: 61 REAF 64
E+F
Sbjct: 86 TESF 89
>gi|406830023|ref|ZP_11089617.1| hypothetical protein SpalD1_00247 [Schlesneria paludicola DSM
18645]
Length = 374
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
F L+ L LA+T G+ +L ++ +L L+L CT I+ G
Sbjct: 98 FTSLTMLTLAFTKITDVGLVELKDLKNLTRLDLGGCT---------------AITDVGLN 142
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
I E + + S F DV L+ +K L +L+L + I DD ++ + +
Sbjct: 143 EIKELTSLASLHLSYTQFTDVGLKELA------DLKCLSNLELRGTQITDDGLKELGTLT 196
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+ R + T+ S G+ L G L NL+IL L T+I D + + + + + +
Sbjct: 197 SLTRLTLMQ-TKISDLGLRELKG-LRNLQILDLGLTEITDEGLKEIIDLKQIHSLYL--- 251
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRN 235
F ++ E + ++ LN+L L+L QT++++ L +S L +
Sbjct: 252 ----FGDEITDE-----GMQSIGELNNLTELDLIQTEITNEGLKEISGLKNLKKLHLLND 302
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 295
+TDV L ++ ++++LTN+++ +TN+GL + ++L+ LD+ +T + ++
Sbjct: 303 GKITDVGLKEIGTMTQLTNINLGRTGITNAGLKELRNLKNLQSLDVSETE-VTSEGVVAL 361
Query: 296 CKMHPRIEV 304
K P++++
Sbjct: 362 QKELPKLDI 370
>gi|296124076|ref|YP_003631854.1| ribonuclease inhibitor [Planctomyces limnophilus DSM 3776]
gi|296016416|gb|ADG69655.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Planctomyces
limnophilus DSM 3776]
Length = 474
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 159
+ + IGDD + +VA + +L L L + + GV +L L NL +L L TQ+ D
Sbjct: 113 AETSIGDDDLALVAKL-THLTELRLEGPKITDKGV-LLLKPLTNLVVLGLENTQLTDTGA 170
Query: 160 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 219
++ P+L+ + + T+I L +L L L L L+L T V+D +
Sbjct: 171 EVLASFPNLEVLYLRRTNI------------LDPALAHLSKLAKLRALDLRFTNVTDEGM 218
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L+ +L L L+ +TD SL ++ L L L++ T++GL ++L++L
Sbjct: 219 KSLAGLSQLRDLRLQATRVTDASLPLIAKLPNLQKLNVWGENFTDAGLSQLADTKTLRIL 278
Query: 280 DLHGGWLLTEDAI 292
+L L +E I
Sbjct: 279 ELDDTRLTSEGLI 291
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F +V++ + L+Q++ L L ++ + D S+ ++A + NL+ LN+ F+
Sbjct: 208 LRFTNVTDEGMKSLAGLSQLR---DLRLQATRVTDASLPLIAKL-PNLQKLNVWGENFTD 263
Query: 132 AGVGILA-----------------------GHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
AG+ LA G L NLE L + T+I + ++ + MP +
Sbjct: 264 AGLSQLADTKTLRILELDDTRLTSEGLIKLGGLTNLEELHVRRTRIKNDGLAVVKNMPKM 323
Query: 169 KFI---DISNTDIKGFIQQVGAETDLVLSLTA----------LQNLNHLERLNLEQTQVS 215
+ + D TD G G + + L LT L L LE L+L T S
Sbjct: 324 RRLLLRDTLCTD-PGLEAVSGLKNLVELDLTEGIFGDDGVKNLAGLTSLEDLSLWATTTS 382
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
DA + + K+L L+L +TD + ++ +LT L++ +T++
Sbjct: 383 DAGIESIRDLKKLKALNLEQTRITDAAAKTIAGFGELTELNLSQTEVTDA 432
>gi|386052609|ref|YP_005970167.1| internalin-I [Listeria monocytogenes Finland 1998]
gi|346645260|gb|AEO37885.1| internalin-I [Listeria monocytogenes Finland 1998]
Length = 1778
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQNN----YLNYTGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
ST LI+L+L + + D+S LS+L+ L L++ + + N
Sbjct: 704 STLSRLIYLNLDSNKIEDIS--ALSNLTNLQELTLENNKIEN 743
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISEI---TDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 43.9 bits (102), Expect = 0.13, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 308 NASLKSLATLNGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 363
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
+L + ++++ S C + + L +L +++ D+ + L+ L L
Sbjct: 364 KNLPNLVNITADS----CAIEDLGTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTL 419
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L QI +IS ++ +P L ++D+S ++
Sbjct: 420 DGCGITSIGT---LDNLPKLEKLDLKENQIT--SISEITDLPRLSYLDVSVNNLTTIGDL 474
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 475 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIR--TVGKMTELPSLKEFYAQNN 532
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
S++D+S+ + + L + + ++TN +G+F L+ LD+H + + I
Sbjct: 533 SISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQSLDVHSNRITSTSVI 584
>gi|168705463|ref|ZP_02737740.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 362
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 60/305 (19%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA----------KISLAGTTFINEREA 63
G+ L ++ L LNL I G APLA +++ AG +
Sbjct: 83 GLKHLAPLTKLTALNLGGTKITD--AGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRT 140
Query: 64 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALE--------------------HLDLSSSM 103
+ ++ LS V+N+ L LT+M++L LDLS +
Sbjct: 141 LVALD---LSHTGVTNAGLGHLT-LTKMRSLSLRGTKITDGGLREIRIMSVSGLDLSGTA 196
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
+ D+ ++ + + L+LS+T+ +S G+ LA P L+ LSLS T++ D + +++
Sbjct: 197 LTDEGLKDLGLF-EEITGLDLSDTKVTSNGLKELASQ-PTLKFLSLSRTKVGDAGLKHLA 254
Query: 164 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN---LEQTQVSDATLF 220
+ L+ + ++ T + G T ++ L LERL L T V+ L
Sbjct: 255 PLKRLESLYLNGTGVTG---------------TGVKELAPLERLRILELTGTMVTGGGLK 299
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
LST L L L +A++TD L ++ L L L + +T +G+ + ++L D
Sbjct: 300 HLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLYRTKVTGAGVAELR--KALPRCD 357
Query: 281 LHGGW 285
+ GW
Sbjct: 358 I--GW 360
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 77 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 136
V+++ L LT L LDLSS+ + D ++ +A + L LNL T+ + AG
Sbjct: 55 VTDADLKALAPLT---GLTDLDLSSTPVTDAGLKHLAPL-TKLTALNLGGTKITDAGPTE 110
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLS 194
LA L L L+LS TQ+ D + ++ + +L +D+S+T + G L+
Sbjct: 111 LA-PLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGH---------LT 160
Query: 195 LTALQNLN-----------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
LT +++L+ + L+L T ++D L L F+E+ L L +
Sbjct: 161 LTKMRSLSLRGTKITDGGLREIRIMSVSGLDLSGTALTDEGLKDLGLFEEITGLDLSDTK 220
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+T L +L+S L LS+ + ++GL P + L+ L L+G
Sbjct: 221 VTSNGLKELASQPTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNG 266
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 177 DIKGFIQQV--GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
D KG + V +T L AL L L L+L T V+DA L L+ +L L+L
Sbjct: 40 DPKGVVTHVMLRGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLG 99
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+TD +L+ L+ LT+L++ +T++GL R+L LDL
Sbjct: 100 GTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDL 146
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L G + D + ++ + L +D+S+T + TD L L L L LN
Sbjct: 50 LRGKTVTDADLKALAPLTGLTDLDLSSTPV----------TDA--GLKHLAPLTKLTALN 97
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
L T+++DA L+ L L+L + +TD L +++ L L L + +TN+GLG
Sbjct: 98 LGGTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLG 157
Query: 269 --SFKPPRSLKL 278
+ RSL L
Sbjct: 158 HLTLTKMRSLSL 169
>gi|14423508|gb|AAK62436.1|AF386991_1 Unknown protein [Arabidopsis thaliana]
gi|20148357|gb|AAM10069.1| unknown protein [Arabidopsis thaliana]
Length = 332
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
LT + L +L+L+ D E + + NL+ LNL +++ + L G L LE L
Sbjct: 53 LTALAGLMYLNLNRCNFSDSGCEKFSDL-INLKILNLGMNNITNSCLVHLKG-LTKLESL 110
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAET--DLVLSLTA------ 197
+L +I D + ++S M LK +++S+T++ G G + LS T
Sbjct: 111 NLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGL 170
Query: 198 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L
Sbjct: 171 RKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSL 230
Query: 256 SIRDAVLTNSGLGSFK 271
I LT++G+ + K
Sbjct: 231 EICGGGLTDTGVKNIK 246
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 44/241 (18%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+++NS L LT+ LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 92 NITNSCLVHLKGLTK---LESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGLR 147
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS- 194
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 148 HLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLSA 196
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL--------------------- 233
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 197 LTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTL 253
Query: 234 ----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L L
Sbjct: 254 LNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCKLSAN 313
Query: 290 D 290
D
Sbjct: 314 D 314
>gi|229097621|ref|ZP_04228579.1| Internalin [Bacillus cereus Rock3-29]
gi|228685760|gb|EEL39680.1| Internalin [Bacillus cereus Rock3-29]
Length = 726
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 387
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 363
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|46446667|ref|YP_008032.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400308|emb|CAF23757.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 662
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 44/308 (14%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
NL G+ L ++ L+ LNLS C K++ AG + +++
Sbjct: 361 NLTDAGLAHLTPLTGLQHLNLSRCN---------------KLTDAGLAHLTPLTGLQHLD 405
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSN 126
S N + + LT + L+HLDLS D+ + G L++LNL N
Sbjct: 406 LS-----GCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTG--LQHLNLCN 458
Query: 127 TR-FSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIK- 179
R F+ G+ L L L+ L+LS ++ D +++++ + +L+ +D+S+ TD+
Sbjct: 459 CRKFTDNGLAHLTP-LSVLQHLNLSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGL 517
Query: 180 ------GFIQQVGAETDLVLS---LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELI 229
+Q +G + L+ L L+ L L+ LNL + ++DA L L+ L
Sbjct: 518 AHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQ 577
Query: 230 HLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLL 287
+L L LTD L L+SL+ L +L +R LT++GL P L+ LDL W L
Sbjct: 578 YLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRL 637
Query: 288 TEDAILQF 295
T+ + +F
Sbjct: 638 TKAGLARF 645
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 21/201 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNL 144
LT + L+HLDLS D+ + G L++LNLS + + AG+ L L L
Sbjct: 345 LTPLMGLQHLDLSGCQNLTDAGLAHLTPLTG--LQHLNLSRCNKLTDAGLAHLTP-LTGL 401
Query: 145 EILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLN 202
+ L LSG Q + D +++++ + L+ +D+S Q + TD L+ LT L L
Sbjct: 402 QHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSG------CQNL---TDAGLAHLTPLTGLQ 452
Query: 203 HLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAV 261
HL N + +D L L+ L HL+L R LTDV L L+ L+ L +L +
Sbjct: 453 HLNLCNCR--KFTDNGLAHLTPLSVLQHLNLSRCNKLTDVGLAHLTPLTALQHLDLSSCY 510
Query: 262 -LTNSGLGSFKPPRSLKLLDL 281
LT+ GL P SL+ L L
Sbjct: 511 NLTDVGLAHLTPLTSLQHLGL 531
>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+++MK L LD+ ++ IGD+ V+ ++ + L +LN+ N R GV + + L
Sbjct: 21 FISEMKQLTSLDIYNNRIGDEGVKSISEM-KQLVSLNIYNNRIGDEGVKSII-EMKQLTS 78
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVL--------S 194
L + G +I D + ++S M L ++IS I FI ++ T L +
Sbjct: 79 LDIGGNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISEMKQLTSLNIYNNRIGDEG 138
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+ ++ + L+ L++ + Q+S +S K+L+ L++ N + D + +S + +LT+
Sbjct: 139 VKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRI-DEGVKSISEMKQLTS 197
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
L+I + + + + L LD++ + E AI KM
Sbjct: 198 LNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIF-ISKMKQ 242
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 67 IETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 124
IE L+ LD+ + + F+++MK L L++S + IGD ++ + L +LN+
Sbjct: 71 IEMKQLTSLDIGGNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISEM-KQLTSLNI 129
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
N R GV + + L+ L + QI ++S M L ++I N I ++
Sbjct: 130 YNNRIGDEGVKSII-EMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRIDEGVK- 187
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
++ + L LN+ + ++ D +S K+L L + N + D
Sbjct: 188 ------------SISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAI 235
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+S + +LT+L+I + + + G+ S + L LD+
Sbjct: 236 FISKMKQLTSLNIYNNRIGDEGVKSIIEMKRLTSLDI 272
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 67 IETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 124
IE L+ LD+ + + F+++MK L LD+S + IGD+ V+ ++ + L +LN+
Sbjct: 262 IEMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISENRIGDEGVKSISEM-KQLTSLNI 320
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
S R G ++ + L+ L + G QI D + ++S M L
Sbjct: 321 SENRIGDEGAKSIS-EMKRLKSLDIGGNQIGDEGVKFISEMKQL 363
>gi|423534546|ref|ZP_17510964.1| hypothetical protein IGI_02378, partial [Bacillus cereus HuB2-9]
gi|402462963|gb|EJV94666.1| hypothetical protein IGI_02378, partial [Bacillus cereus HuB2-9]
Length = 618
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|290892518|ref|ZP_06555511.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
gi|290557827|gb|EFD91348.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
Length = 1775
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ T V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL ++ N F+ G LPNLE L +S ++ M
Sbjct: 590 FNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 650 DGVPKLRILDLQNN----YLNYNGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 700
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
ST LI+L+L + + D+S LS+L+ L L++ + + N
Sbjct: 701 STLSRLIYLNLDSNKIEDIS--ALSNLTNLQELTLENNKIEN 740
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENK 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 443 ITSISEI---TDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLTDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
++ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 607 PDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 665
Score = 42.0 bits (97), Expect = 0.49, Method: Composition-based stats.
Identities = 57/296 (19%), Positives = 124/296 (41%), Gaps = 31/296 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L L I L+G + + E +
Sbjct: 305 NASLKSIETLNGATKLQLIDASNCTDLETLGDISGLLELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L +++ D+ + L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L +I +IS ++ +P L ++D+S ++
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENKIT--SISEITDLPRLSYLDVSVNNLTTIGDL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
S++D+S+ + + L + + ++TN +G+F L+ LD+H + + I
Sbjct: 530 SISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQSLDVHSNRITSTSVI 581
>gi|46446831|ref|YP_008196.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400472|emb|CAF23921.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 666
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 33/321 (10%)
Query: 5 LSFLNLAW------TGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTT 56
L L+L+W G+ L +++ L+ L+LSNC D+ L + L ++L+
Sbjct: 336 LQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCL 395
Query: 57 FINEREAFLYIETSLLSFLDVS--NSSLSRFCFLTQMKALEHLDLSSS--MIGDDSVEMV 112
+ + + L L++S N + + LT + L+HLDLS S +I +
Sbjct: 396 KLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLR 455
Query: 113 ACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKF 170
V L++LNL+ + + AG+ L+ L L+ L LS Q + ++++ + +L++
Sbjct: 456 PLVA--LQHLNLTGCWKLTDAGLAHLSP-LKALQTLGLSWCQNLTGAGLAHLKPLVALQY 512
Query: 171 IDISN----TDIK-GFIQQVGAETDLVLS---------LTALQNLNHLERLNLEQT-QVS 215
+D+SN TD ++ + A L L+ L L +L L+ LNL +++
Sbjct: 513 LDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQHLNLSWCLKLT 572
Query: 216 DATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 274
DA L L L HL L N + LTD L L L L +L++ LT+ GL P
Sbjct: 573 DAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLT 632
Query: 275 SLKLLDLHGGWLLTEDAILQF 295
+L+ LDL + LT+ + F
Sbjct: 633 TLQYLDLSSCYNLTDAGLAHF 653
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 39/233 (16%)
Query: 88 LTQMKALEHLDLSS-SMIGDDSVEMVACVGA------------------------NLRNL 122
LT +KAL+HLDLS S + DD + + + A L++L
Sbjct: 255 LTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHL 314
Query: 123 NLSNTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKG 180
+LSN + + AG+ L L L+ L LS ++ D +++++ + L+ +D+SN K
Sbjct: 315 DLSNCKNLTDAGLAHLTS-LMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSN--CKN 371
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
A + SL ALQ+LN L L +DA L L+ L HL+L +LT
Sbjct: 372 LTDAGLAH---LTSLMALQHLNLSWCLKL-----TDAGLAHLTPLTALQHLNLSRYNLTY 423
Query: 241 VSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
L L+SL+ L +L + + L ++GL +P +L+ L+L G W LT+ +
Sbjct: 424 AGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGL 476
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 148/305 (48%), Gaps = 30/305 (9%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI-NEREAFLYIETSL- 71
G+ L + +L+ L+LS C+ + +G + PL + G + N +A L T L
Sbjct: 251 GLAHLTTLKALQHLDLSQCSKLTD-DGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLT 309
Query: 72 -LSFLDVSNS---SLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLS 125
L LD+SN + + LT + AL+HLDLS + D+ + + G L++L+LS
Sbjct: 310 GLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTG--LQHLDLS 367
Query: 126 NTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISN-------- 175
N + + AG+ L L L+ L+LS ++ D +++++ + +L+ +++S
Sbjct: 368 NCKNLTDAGLAHLTS-LMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGL 426
Query: 176 ---TDIKGF--IQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELI 229
T + G + G+ + L L+ L L+ LNL +++DA L LS K L
Sbjct: 427 AHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLSPLKALQ 486
Query: 230 HLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLL 287
L L +LT L L L L L + + LT++GL +P +L+ L+L G W L
Sbjct: 487 TLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKL 546
Query: 288 TEDAI 292
T+ +
Sbjct: 547 TDAGL 551
>gi|404406789|ref|YP_006689504.1| internalin I [Listeria monocytogenes SLCC2376]
gi|404240938|emb|CBY62338.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 1775
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ T V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL ++ N F+ G LPNLE L +S ++ M
Sbjct: 590 FNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 650 DGVPKLRILDLQNN----YLNYNGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 700
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
ST LI+L+L + + D+S LS+L+ L L++ + + N
Sbjct: 701 STLSRLIYLNLDSNKIEDIS--ALSNLTNLQELTLENNKIEN 740
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENK 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 443 ITSISEI---TDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLTDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
++ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 607 PDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 665
Score = 42.0 bits (97), Expect = 0.50, Method: Composition-based stats.
Identities = 57/296 (19%), Positives = 124/296 (41%), Gaps = 31/296 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L L I L+G + + E +
Sbjct: 305 NASLKSIETLNGATKLQLIDASNCTDLETLGDISGLLELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L +++ D+ + L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L +I +IS ++ +P L ++D+S ++
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENKIT--SISEITDLPRLSYLDVSVNNLTTIGDL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
S++D+S+ + + L + + ++TN +G+F L+ LD+H + + I
Sbjct: 530 SISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQSLDVHSNRITSTSVI 581
>gi|423546410|ref|ZP_17522768.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB5-5]
gi|401180979|gb|EJQ88133.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB5-5]
Length = 710
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|229116621|ref|ZP_04246007.1| Internalin [Bacillus cereus Rock1-3]
gi|228666793|gb|EEL22249.1| Internalin [Bacillus cereus Rock1-3]
Length = 705
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 387
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 363
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|423540177|ref|ZP_17516568.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
gi|401173712|gb|EJQ80924.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
Length = 710
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423442133|ref|ZP_17419039.1| hypothetical protein IEA_02463, partial [Bacillus cereus BAG4X2-1]
gi|402416089|gb|EJV48408.1| hypothetical protein IEA_02463, partial [Bacillus cereus BAG4X2-1]
Length = 595
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423447642|ref|ZP_17424521.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
gi|401130053|gb|EJQ37722.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
Length = 710
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423465200|ref|ZP_17441968.1| hypothetical protein IEK_02387, partial [Bacillus cereus BAG6O-1]
gi|402418961|gb|EJV51249.1| hypothetical protein IEK_02387, partial [Bacillus cereus BAG6O-1]
Length = 628
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|290974572|ref|XP_002670019.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083573|gb|EFC37275.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 334
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S+ + F+++MK L L +S + IGD+ V++++ + L +LN+SN R GV +++
Sbjct: 124 SIEKAKFISEMKQLTSLIISDNGIGDEGVKLISEL-KQLTSLNMSNNRIGDEGVKLIS-E 181
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
L L L +S I + +S M L ++I+ ++G E + +
Sbjct: 182 LKQLTSLDISLNDIGAEGVKSISEMKQLTSLNIN-------YNRIGDE-----GVKLISE 229
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L L LN+ + D + +S K+L L++ N + D + +S L +LT+L+I +
Sbjct: 230 LKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNN 289
Query: 261 VLTNSGLGSFKPPRSLKLLDLH 282
+ G S + L L ++
Sbjct: 290 RIGAEGAKSISEMKQLTSLSIN 311
>gi|423379089|ref|ZP_17356373.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
gi|423623795|ref|ZP_17599573.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401257718|gb|EJR63915.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401633535|gb|EJS51312.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
Length = 717
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|168701675|ref|ZP_02733952.1| hypothetical protein GobsU_19277 [Gemmata obscuriglobus UQM 2246]
Length = 407
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREA 63
LSF + TG+ +L + L L+LS + D+ ++ L + L G T ++
Sbjct: 41 LSFTRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLD---- 96
Query: 64 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
L+F V+++ + L +KAL LDLS +++ D+ ++ +A +GA L L
Sbjct: 97 --------LTFTRVTDAGVK---ALAALKALTTLDLSHTLVTDEGLKELAALGA-LNTLG 144
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
L T + AGV LA L L L L + D +S + L + +S T +
Sbjct: 145 LGGTSVTDAGVKELAA-LKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGV----- 198
Query: 184 QVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
TD V L AL+NL HLE L T V+DA + L+ K L+
Sbjct: 199 -----TDAGVKELAALKNLTHLE---LAATGVTDAGVKELAALKSLV 237
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 92 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-------GILAGHLPNL 144
+ + + LS + + D ++ +A + L L+LS T + AGV + A L L
Sbjct: 34 RPVTKVSLSFTRVTDTGLKELAAL-KGLTTLDLSYTEVTDAGVKALAALKALTALGLKGL 92
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
L L+ T++ D + ++ + +L +D+S+T + G L L L L
Sbjct: 93 TTLDLTFTRVTDAGVKALAALKALTTLDLSHT----LVTDEG--------LKELAALGAL 140
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L L T V+DA + L+ K L L L + +TD +LS L+ LT L + +T+
Sbjct: 141 NTLGLGGTSVTDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTD 200
Query: 265 SGLGSFKPPRSLKLLDL 281
+G+ ++L L+L
Sbjct: 201 AGVKELAALKNLTHLEL 217
>gi|149174696|ref|ZP_01853321.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
gi|148846390|gb|EDL60728.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
Length = 460
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
MK L+ L + ++ + D+ ++ +A + NL+ LN S + +L NL L L
Sbjct: 213 MKNLKVLKVQATQVTDEGMKDIAAL-PNLQRLNTWGRNISDETLELLKDK--NLVSLELD 269
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
T+I D + Y+ M +++ + + + F+ G E +QN+ L+ L+L
Sbjct: 270 DTEISDEGMKYLKDMTNMESLHLR----RDFVGNPGIEN--------IQNMKKLQTLHLR 317
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
T V+D + LS +L +L L + + D L Q+ L KLT L + T+ GL
Sbjct: 318 DTVVTDEGMKYLSGLTDLTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVI 377
Query: 271 KPPRSLKLLDLHG 283
L L+L G
Sbjct: 378 SGFTELNRLNLEG 390
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 25/279 (8%)
Query: 2 FPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 55
FP L L+L + G+ + + +L+ L + + EG ++ A L + T
Sbjct: 188 FPELKDLDLRFNKEINDEGMPHIKGMKNLKVLKVQATQVTD--EGMKDIAALPNLQRLNT 245
Query: 56 --TFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
I++ L + +L+S LD + S +L M +E L L +G+ +E +
Sbjct: 246 WGRNISDETLELLKDKNLVSLELDDTEISDEGMKYLKDMTNMESLHLRRDFVGNPGIENI 305
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
+ L+ L+L +T + G+ L+G L +L L L + I D + + + L +
Sbjct: 306 QNM-KKLQTLHLRDTVVTDEGMKYLSG-LTDLTYLDLDESMIGDQGLEQIKDLKKLTRLG 363
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+ T+ TD L + L RLNLE T ++DA L L K+L +L+
Sbjct: 364 LWGTET----------TDQ--GLKVISGFTELNRLNLEGTPITDAGLKQLLPLKKLEYLN 411
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
L ++D L L++L L L + +T+ G+ F+
Sbjct: 412 LSKTEISDEGLKTLAALKNLKELQLSFTQVTDDGVKQFE 450
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 78 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 137
+N+ + L + +LE L L D S E + L L+L +T GV L
Sbjct: 103 TNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKN-KLWFLSLESTAIGDEGVKNL 161
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDI--KGFIQQVGAETDLVLS 194
+ L L++LSL T I + A+ ++ P LK +D+ N +I +G G + VL
Sbjct: 162 S-DLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNLKVLK 220
Query: 195 LTALQ----------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+ A Q L +L+RLN +SD TL L K L+ L L + ++D +
Sbjct: 221 VQATQVTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSLELDDTEISDEGMK 279
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L ++ + +L +R + N G+ + + + L+ L L
Sbjct: 280 YLKDMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLR 317
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 29/146 (19%)
Query: 146 ILSLSGTQIDDYAISYMSMMPSLK--------FIDISNTDIKGFIQQVGAETDLVLSLTA 197
IL L GT D + +++ +PSL+ F D+S +++G +
Sbjct: 97 ILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVST-------EEIGKK--------- 140
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
N L L+LE T + D + LS + L LSLR ++T+ +L +++ +L +L +
Sbjct: 141 ----NKLWFLSLESTAIGDEGVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDL 196
Query: 258 R-DAVLTNSGLGSFKPPRSLKLLDLH 282
R + + + G+ K ++LK+L +
Sbjct: 197 RFNKEINDEGMPHIKGMKNLKVLKVQ 222
>gi|149175123|ref|ZP_01853746.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
gi|148846101|gb|EDL60441.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
Length = 1079
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
P L+ L++ + D A+ Y+ D++N D + ++ L+ L+
Sbjct: 77 QFPRLDYLAMVCPHLGDEALLYIR--------DLTNLDTLMLSESAVGDS----GLSCLK 124
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
LN LERL L+ T+V+DA L LS+ K+L LSLRN ++TD + L+ L+ L L +
Sbjct: 125 KLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSG 184
Query: 260 AVLTNSGLGSFKPPRSLKLLDL 281
++++GL S + LK+L L
Sbjct: 185 TQVSDAGLKSLTELKQLKILYL 206
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L Q L++L + +GD+++ + + NL L LS + +G+ L L LE L
Sbjct: 75 LEQFPRLDYLAMVCPHLGDEALLYIRDL-TNLDTLMLSESAVGDSGLSCLK-KLNKLERL 132
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
L T++ D + ++S + LK + + N ++ TD + L +LN+LE L
Sbjct: 133 YLDNTKVTDAGLQHLSSLKQLKVLSLRNLNV----------TDQ--GMQTLADLNNLEVL 180
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L TQVSDA L L+ K+L L L ++T L L++L L +LS+
Sbjct: 181 FLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSL 230
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+L +++L +L+ L L ++ V D+ L L +L L L N +TD L LSSL +L
Sbjct: 95 ALLYIRDLTNLDTLMLSESAVGDSGLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLK 154
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
LS+R+ +T+ G+ + +L++L L G
Sbjct: 155 VLSLRNLNVTDQGMQTLADLNNLEVLFLSG 184
>gi|297844484|ref|XP_002890123.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335965|gb|EFH66382.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
LT + L L+L+ D E + + NL+ LNL +++ + L G L LE L
Sbjct: 299 LTALTGLMFLNLNRCNFSDSGCEKFSDL-INLKILNLGMNSITNSCLVHLRG-LTKLESL 356
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAET--DLVLSLTA------ 197
+L +I D + ++S M LK +++S+T++ G G + LS T
Sbjct: 357 NLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGL 416
Query: 198 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L
Sbjct: 417 RKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSL 476
Query: 256 SIRDAVLTNSGLGSFK 271
I LT++G+ + K
Sbjct: 477 EICGGGLTDTGVKNIK 492
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 43/247 (17%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L L++ +S++ C L + LE L+L S IGD+ + ++ + L++L LS+T
Sbjct: 329 LKILNLGMNSITNSCLVHLRGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEV 387
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
S G+ L+G L NLE ++LS T + D + +S + SL+ +++ + T
Sbjct: 388 GSNGLRHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------T 436
Query: 190 DLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL--------------- 233
D LS LT+L L HL+ L +++D+ L K+L L +
Sbjct: 437 DAGLSALTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKD 493
Query: 234 ----------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L
Sbjct: 494 LSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLES 553
Query: 284 GWLLTED 290
L D
Sbjct: 554 CKLSAND 560
>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
syzygii R24]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 82/195 (42%), Gaps = 14/195 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L L
Sbjct: 215 LAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTSL 272
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+ I D ++ SL + I + I GA+ AL L L
Sbjct: 273 RIDSNTIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTTL 320
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
NL + DA S LI LS+R + L+D L++ LT L D + ++G
Sbjct: 321 NLGYNGIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDAGDNTIRDAGA 380
Query: 268 GSFKPPRSLKLLDLH 282
+ R+L LD+
Sbjct: 381 RALAANRTLTTLDVR 395
>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
Length = 413
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 22/231 (9%)
Query: 49 KISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 107
+I + G +I+E + TSL +S +++S+ ++++MK L L + ++ IGD+
Sbjct: 144 RIGVEGVKYISEMKQL----TSLNISEIEISDEGAK---YISEMKQLTSLYIHNNEIGDE 196
Query: 108 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
+ ++ + L +LN+ S G ++ + L LS+ +I D Y+S M
Sbjct: 197 GSKHISEM-KQLTSLNIGCNEISDEGAKHIS-EMNQLISLSIGYNRIGDEGFKYISEMKQ 254
Query: 168 LKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVS 215
L +DI++ +I +I ++ T L + + + L L L++ +T++S
Sbjct: 255 LTSLDITDDEIGDEGAKYISEMKQLTSLNIGFNEIGDEGAKYISELKQLTSLDISETEIS 314
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
D +S K+LI L++ ++D +S L +LT+L I D + N G
Sbjct: 315 DEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQLTSLDITDNKIGNEG 365
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S+ + F+++MK L LD+ S+ IG + V+ ++
Sbjct: 122 SVDQLKFISEMKQLTSLDIYSNRIGVEGVKYIS--------------------------E 155
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+ L L++S +I D Y+S M L + I N +I G E +S
Sbjct: 156 MKQLTSLNISEIEISDEGAKYISEMKQLTSLYIHNNEI-------GDEGSKHIS-----E 203
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ L LN+ ++SD +S +LI LS+ + D +S + +LT+L I D
Sbjct: 204 MKQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGDEGFKYISEMKQLTSLDITDD 263
Query: 261 VLTNSGLGSFKPPRSLKLLDL 281
+ + G + L L++
Sbjct: 264 EIGDEGAKYISEMKQLTSLNI 284
>gi|290987592|ref|XP_002676506.1| predicted protein [Naegleria gruberi]
gi|284090109|gb|EFC43762.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 18 LPNISSLE--CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
LPNI +LE C T DS + G + KI G I ++ A +IE L+ L
Sbjct: 6 LPNIVTLEWTCSRYQKFTFDSGIFGTMKQLTKLKI---GENNIGDQNAKCFIEMKQLTSL 62
Query: 76 DVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
DV ++++S+ F+ +M L +L+++++ +G+ + ++ + L LN+ G
Sbjct: 63 DVYHNNISKEGAKFIGEMTQLTYLNVNTNNVGELGAKYISKLNQ-LITLNIGLNSIGEQG 121
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLV 192
++ + L L++ I + +++S M L IS NT G +
Sbjct: 122 AEYIS-EMKQLTDLNIYSCNIGNRGANHISRMKQL----ISLNTGRNGLDDE-------- 168
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ + LN L LN+ + +S+ L +S K++IHL + N + D +S + +L
Sbjct: 169 -GVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQL 227
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
T L I + + G + L LD+
Sbjct: 228 TRLDISNNSIGEEGTKYISEMKKLTYLDI 256
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 80 SSLSRFCF----LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
S +F F MK L L + + IGD + + + L +L++ + S G
Sbjct: 17 SRYQKFTFDSGIFGTMKQLTKLKIGENNIGDQNAKCFIEM-KQLTSLDVYHNNISKEGAK 75
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 195
+ G + L L+++ + + Y+S + L ++I I + GAE
Sbjct: 76 FI-GEMTQLTYLNVNTNNVGELGAKYISKLNQLITLNIGLNSIG----EQGAE------- 123
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ + L LN+ + + +S K+LI L+ L D + +S L++L L
Sbjct: 124 -YISEMKQLTDLNIYSCNIGNRGANHISRMKQLISLNTGRNGLDDEGVKYISELNQLNFL 182
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA-ILQFCKMHPRIEV 304
+I D+ ++ GL + + LD+ ++ E A I+ K R+++
Sbjct: 183 NIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQLTRLDI 232
>gi|168700133|ref|ZP_02732410.1| hypothetical protein GobsU_11435 [Gemmata obscuriglobus UQM 2246]
Length = 167
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 106 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 165
D V+ +A + L LNL TR + GV LA L L L L GT + D + +S +
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELA-ALKALTNLDLGGTGVTDAGVKELSGL 63
Query: 166 PSLKFIDISNTDIKGFIQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
L +++ +T I TD V L AL+NLNHL+ L T+V+DA LS
Sbjct: 64 KGLTRLELRSTKI----------TDAGVKELAALKNLNHLD---LGGTKVTDAGAKELSG 110
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L+ L L N +TD + L++L+ LT L + +T++GL
Sbjct: 111 LNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAGL 153
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
AGV LA L L+L T++ D + ++ + +L +D+ T + TD
Sbjct: 6 AGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGV----------TDA 55
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ L L L RL L T+++DA + L+ K L HL L +TD +LS L+
Sbjct: 56 --GVKELSGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNF 113
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
L L + + +T++G+ + L LDLHG +T+ + + P+ +V
Sbjct: 114 LVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTG-VTDAGLKELNAALPKCKV 165
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 92 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 151
K L L+L + + D V+ +A + A L NL+L T + AGV L+G L L L L
Sbjct: 16 KGLTTLNLRRTRVTDVGVKELAALKA-LTNLDLGGTGVTDAGVKELSG-LKGLTRLELRS 73
Query: 152 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 211
T+I D + ++ + +L +D+ T + GA+ L LN L L+L
Sbjct: 74 TKITDAGVKELAALKNLNHLDLGGTKV----TDAGAK--------ELSGLNFLVTLDLSN 121
Query: 212 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
TQV+DA + L+ L L L +TD L +L++
Sbjct: 122 TQVTDAGVKALTALTGLTTLDLHGTGVTDAGLKELNA 158
>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
disease bacterium R229]
Length = 533
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 81/195 (41%), Gaps = 14/195 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L L
Sbjct: 280 LAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTSL 337
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+ I D ++ SL + I + I GA+ AL L L
Sbjct: 338 RIDSNNIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTTL 385
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
NL + DA S LI LS+R L+D L++ LT L D + ++G
Sbjct: 386 NLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAGA 445
Query: 268 GSFKPPRSLKLLDLH 282
+ R+L LD+
Sbjct: 446 RALAANRTLTTLDVR 460
>gi|124004058|ref|ZP_01688905.1| Rab family protein [Microscilla marina ATCC 23134]
gi|123990637|gb|EAY30117.1| Rab family protein [Microscilla marina ATCC 23134]
Length = 1165
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 38/272 (13%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T +T L ++ +L+ L+L N I S L +N + L I L + L
Sbjct: 281 TDLTPLQSLRNLQSLDLRNNQI-SDLTPLQNLSSLQSIDLRHNPI---NDLLPLQNLPNL 336
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL-NLSNTRFSS 131
+D+ + ++ L + LE +DLS + I D + L+NL NL + S+
Sbjct: 337 QSIDLKYNHINDLAPLQNLPNLESIDLSDNQISDLTP---------LQNLSNLQSIDLSN 387
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
V LA +LPNLE + LS QI+D A + + L+ ID+SN I
Sbjct: 388 NQVNHLASLQYLPNLESIDLSDNQINDLAP--LQNLGDLQSIDLSNNQIH---------- 435
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
LT LQNL +LE ++L Q+SD T PL L ++LRN ++D+S L +L
Sbjct: 436 ----DLTPLQNLPNLESIDLSDNQISDLT--PLQNLGSLQSINLRNNQVSDLS--PLQAL 487
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L +++ D + S L + LK +DL
Sbjct: 488 HDLQAINLSDNQI--SDLAPLQKLPHLKSIDL 517
>gi|156406568|ref|XP_001641117.1| predicted protein [Nematostella vectensis]
gi|156228254|gb|EDO49054.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 27/251 (10%)
Query: 66 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNL 124
YI+ L +L V+N L+ F Q L HL + S +I D ++E V + A L L L
Sbjct: 463 YIK--LDCYLLVTNDLLAELRFHRQ---LVHLSIKSCPIITDKALEAVVDLPA-LTTLQL 516
Query: 125 SNTRFSSAGVGILAGH---LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
NT+ S G+ +GH + L LSL+GT + + + ++ L+ + + NT I
Sbjct: 517 DNTKISDKGLMYFSGHANCIQTLVHLSLNGTGVTNQGTASLADWKILRILGLENTKIT-- 574
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
SL +++L HL+ LN+ T V+D L L++ L L++ S+TD
Sbjct: 575 ------------SLDVIRHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQTSVTDR 622
Query: 242 SLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
L L L L++L + D +T+SG+ SL L L LT++ ++Q +
Sbjct: 623 GLQHLKGLP-LSSLDLSDYRNITDSGVQYIAGMTSLTRL-LLSNTRLTDEGMVQLSGLAK 680
Query: 301 RIEVWHELSVI 311
+E+ + +V+
Sbjct: 681 LVELNVDRTVV 691
>gi|290981666|ref|XP_002673551.1| predicted protein [Naegleria gruberi]
gi|284087135|gb|EFC40807.1| predicted protein [Naegleria gruberi]
Length = 438
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++MK L +LD+S++ IG+ VE V+ +G NL L + + G + L L L
Sbjct: 147 ISEMKQLTNLDISNNYIGETGVEYVSEMG-NLTTLTIIENNLRAEGCKKIR-KLKQLTRL 204
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 203
S+ +I ++S M L F++I+N I+ +I Q+G +
Sbjct: 205 SIYDNKIGAEGAKFISEMEQLMFLEINNNSIRNEGTEYISQLG----------------N 248
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
L L++ ++ +S FK+L L + S LS+L++LT+L I + +
Sbjct: 249 LTELDISHNEIGSEGAKHISQFKQLTCLRFSYNKINAESFEYLSTLTQLTDLRICSSSIG 308
Query: 264 NSGLGSFKPPRSLKLLDLHG 283
+ + S +SL +L L+G
Sbjct: 309 DDSIKSITNLKSLTILYLNG 328
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 48/249 (19%)
Query: 49 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGD 106
KI G FI+E E + FL+++N+S+ +++Q+ L LD+S + IG
Sbjct: 210 KIGAEGAKFISEMEQLM--------FLEINNNSIRNEGTEYISQLGNLTELDISHNEIGS 261
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ + ++ L L S +I+ + Y+S +
Sbjct: 262 EGAKHIS--------------------------QFKQLTCLRFSYNKINAESFEYLSTLT 295
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L TD++ +G + S+ ++ NL L L L +SD +S
Sbjct: 296 QL-------TDLRICSSSIGDD-----SIKSITNLKSLTILYLNGNNISDNGCKNISELT 343
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+L LS+ +++D LS L++LT L + + N G + LK L + +
Sbjct: 344 QLTDLSMALNNISDEGCKFLSQLTQLTELDVSYNRIGNIGAEYINEMKQLKHLAIQANNI 403
Query: 287 LTEDAILQF 295
E I Q
Sbjct: 404 RNESKIDQL 412
>gi|348682865|gb|EGZ22681.1| hypothetical protein PHYSODRAFT_491927 [Phytophthora sojae]
Length = 648
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 14 GVTKLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
G++ L +++L+ + +C+ I SI + ++ L G T E +A + + L
Sbjct: 368 GMSSLSGLANLKYFDARHCSKIHSI----PTEWTQLEVLLLGYTAFAESDAAVLQYLTNL 423
Query: 73 SFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
L++ + + F F++++ LE L+L + + D + + +L+ LN+SNT S
Sbjct: 424 HELELRKCRIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKALNISNTEIS 483
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAE 188
G LA L L IL L I + A++ +S + L+ +D+ +I G + V
Sbjct: 484 DNGAAGLA-KLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHLVPLH 542
Query: 189 TDLVLSLTA----------LQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNAS 237
LS+ + L L LNL Q + + +LF L L L+L N
Sbjct: 543 KLQELSICGGNIGDRGVGLISKLTSLTSLNLSQNRNIRTKSLFYLRALTGLRCLNLSNTG 602
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
++ +SL LSSL +L +LS+ L+
Sbjct: 603 ISALSLRHLSSLKELQSLSVYGCSLSQG 630
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 61/258 (23%)
Query: 87 FLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
+L +M LE L ++ + D ++E A + LR L+++N R S + + G + +LE
Sbjct: 296 YLAKMAKLEKLRIARCRKLTDAALEDFAMMFPKLRELDVANCRLSEKALQYI-GQIKSLE 354
Query: 146 ILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTD---------------IKGFIQQVGAET 189
+L + G Q I D +S +S + +LK+ D + + G+ ++
Sbjct: 355 VLVIRGCQDICDDGMSSLSGLANLKYFDARHCSKIHSIPTEWTQLEVLLLGYTAFAESDA 414
Query: 190 DLVLSLTALQ------------------NLNHLERL------------------------ 207
++ LT L L HLERL
Sbjct: 415 AVLQYLTNLHELELRKCRIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKA 474
Query: 208 -NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
N+ T++SD L+ KEL L L +T+ +L LS L++L L + A +T++G
Sbjct: 475 LNISNTEISDNGAAGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNG 534
Query: 267 LGSFKPPRSLKLLDLHGG 284
L P L+ L + GG
Sbjct: 535 LMHLVPLHKLQELSICGG 552
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNT 176
NL L L R G ++ L +LE L L T + D + + SLK ++ISNT
Sbjct: 422 NLHELELRKCRIMKRGFQFIS-RLTHLERLELGETALTDSGLLEICNSAKSLKALNISNT 480
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+I GA L L L L L+ +++ L LS L L L A
Sbjct: 481 EI----SDNGA--------AGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFGA 528
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++TD L L L KL LSI + + G+G SL L+L
Sbjct: 529 NITDNGLMHLVPLHKLQELSICGGNIGDRGVGLISKLTSLTSLNL 573
>gi|8927653|gb|AAF82144.1|AC034256_8 Contains similarity to F-box protein FBL2 from Homo sapiens
gb|AF176518 and contains multiple Leucine Rich PF|00560
repeats. ESTs gb|Z34572, gb|Z34571, gb|AI100681,
gb|AI100675, gb|AA395320, gb|AI100674, gb|AA651378,
gb|AA007067, gb|T46145, gb|T22090, gb|AI995016,
gb|H36884, gb|AI995066, gb|H37061, gb|T43537 come from
this gene [Arabidopsis thaliana]
Length = 568
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 14/193 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ L +L+L+ D E + + NL+ LNL +++ + L G L LE L+L
Sbjct: 292 LAGLMYLNLNRCNFSDSGCEKFSDL-INLKILNLGMNNITNSCLVHLKG-LTKLESLNLD 349
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAET--DLVLSLTA--------L 198
+I D + ++S M LK +++S+T++ G G + LS T L
Sbjct: 350 SCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKL 409
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L I
Sbjct: 410 SGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEIC 469
Query: 259 DAVLTNSGLGSFK 271
LT++G+ + K
Sbjct: 470 GGGLTDTGVKNIK 482
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 44/233 (18%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+++NS L LT+ LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 328 NITNSCLVHLKGLTK---LESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGLR 383
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS- 194
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 384 HLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLSA 432
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL--------------------- 233
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 433 LTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTL 489
Query: 234 ----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L
Sbjct: 490 LNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLE 542
>gi|59802561|gb|AAX07517.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 402
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
ANL LNL T+ + G+ L G L NL L L GT D +++ + + +L +++S+T
Sbjct: 190 ANLTELNLRFTKVTYLGLKELKG-LTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDT 248
Query: 177 DI--KGFIQQVG----AETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLST 224
+ G + G A DL + L L+ L++L L+L T V+DA L L
Sbjct: 249 KVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGTSVTDAGLKELGR 308
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+L L L + +T L +L+ L+ LT+L +R +T++GL +L LDL G
Sbjct: 309 LSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFG 367
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 77 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 136
+++SL+ LT L L+LS + + D ++ + + ANL +L+L T+ + AG+
Sbjct: 226 TTDASLAELKGLTN---LTELNLSDTKVTDAGLQELTGL-ANLASLDLRFTKVTDAGLQK 281
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 196
L G L NL +L L GT + D + + + L +D+ +T + G L
Sbjct: 282 LKG-LSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGT------------GLK 328
Query: 197 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
L L +L L+L T V+DA L LS L L L ++D L +L LSKLT+L
Sbjct: 329 ELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFGTPVSDTDLKELKKLSKLTSLR 388
Query: 257 IRDAVLTNSGL 267
+ +T+ G+
Sbjct: 389 LGRTAVTDVGI 399
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
L+L T+ + AG+ L G L NL + ++ D + +S + +L +++ T +
Sbjct: 147 LDLGRTKVTDAGLQELRG-LTNLTTWISAPHEVTDAGLKELSGLANLTELNLRFTKVT-- 203
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
L L L+ L +L L+L T +DA+L L L L+L + +TD
Sbjct: 204 ----------YLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTKVTDA 253
Query: 242 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L +L+ L+ L +L +R +T++GL K +L +LDL G
Sbjct: 254 GLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFG 295
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F V++ L L+++ L DL + + D ++ + + NL + +
Sbjct: 125 LRFTKVTDLGLKEMRSLSKLTVL---DLGRTKVTDAGLQELRGL-TNLTTWISAPHEVTD 180
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
AG+ L+G L NL L+L T++ + + + +L +D+ T + TD
Sbjct: 181 AGLKELSG-LANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGT----------STTDA 229
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
SL L+ L +L LNL T+V+DA L L+ L L LR +TD L +L LS
Sbjct: 230 --SLAELKGLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSN 287
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L + +T++GL L +LDL
Sbjct: 288 LAVLDLFGTSVTDAGLKELGRLSKLTVLDL 317
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L L +++L+ L L+L +T+V+DA L L L +TD L +LS L+ L
Sbjct: 133 LGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEVTDAGLKELSGLANL 192
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
T L++R +T GL K +L LDL G
Sbjct: 193 TELNLRFTKVTYLGLKELKGLTNLTSLDLFG 223
>gi|407705527|ref|YP_006829112.1| ATP-grasp domain-containing protein [Bacillus thuringiensis MC28]
gi|407383212|gb|AFU13713.1| Internalin [Bacillus thuringiensis MC28]
Length = 670
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLRS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGID 387
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PL + K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLRSLKNVTYLTL--------AGNQVEDIT 363
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L L ++D VLT + + L LD
Sbjct: 364 PLYALPLKDLVLTRNKVKDLSGIDQLNQLD 393
>gi|342184564|emb|CCC94046.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 852
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 87 FLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
F+T +K L LDL + + D D +V C L+ L L++ R S I G L L
Sbjct: 346 FITSLKNLVELDLRENWVTDEDCASLVHC--KKLQVLRLTSCRHVSDVRWI--GSLSMLH 401
Query: 146 ILSLSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDIKGF- 181
L LS T D IS++ + LK +D+S TD+ G
Sbjct: 402 TLDLSHTHARNCWFEALSQCRRMTELSLAFSKDVVDISFIGELRMLKHLDLSGTDVGGGN 461
Query: 182 IQQVGA----------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
++ +G E LV L L+ L LE LN+E T V D+++ ++ ++L L
Sbjct: 462 LRVIGRCTMLVFLSLRECRLVTDLRFLETLQELESLNVEGTAVVDSSVCSIALCRKLKFL 521
Query: 232 SLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
SLR L DV L L L L + +T G+ + + SL+ +D G ++
Sbjct: 522 SLRYCHQLKDVRC--LQELKMLETLDLAGTYVTEEGVSTLRQCISLRHVDFTGCSFISHL 579
Query: 291 AIL 293
A L
Sbjct: 580 AFL 582
>gi|406830019|ref|ZP_11089613.1| hypothetical protein SpalD1_00225 [Schlesneria paludicola DSM
18645]
Length = 509
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
F L ++ L LDL + I D S+E ++ + NL+ L + T + AGV L LPN
Sbjct: 135 FSELRDLRHLSLLDLGGTRISDASIEGLSQL-KNLKELWIDGTEITDAGVQSLKEALPNA 193
Query: 145 --------------EILSLSGTQIDDYAISYMSMMPSL--KFIDIS-NTDIKGFIQ---- 183
I SL G D A++ ++ F+D+ T I+ +
Sbjct: 194 IVGKDAPDESQAIETIRSLGGGVTRDEAVAGRPVIEVGFGGFLDVGPKTTIEEVLSAVKQ 253
Query: 184 -------QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
Q+G+ D L A + LN+L RL + +++DA L +S +L
Sbjct: 254 FRSLRTLQLGSSGDASHGLLATADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLE 313
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L L N +T+ + ++ L LTNL + D LT++GL + + L L L+
Sbjct: 314 SLRLINLKITNQGMKEIGKLKNLTNLGLFDVQLTDAGLNQLRGLQRLDTLSLN 366
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 18/141 (12%)
Query: 140 HLPNLEILSLSGTQIDDYA---ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 196
L NL L++ G +I D IS +S + SL+ I++ T+ +G ++++G
Sbjct: 284 ELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITN-QG-MKEIG---------- 331
Query: 197 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
L +L L L Q++DA L L + L LSL N ++D L Q+ +L+ LT LS
Sbjct: 332 ---KLKNLTNLGLFDVQLTDAGLNQLRGLQRLDTLSLNNNPISDEGLRQVGALTSLTFLS 388
Query: 257 IRDAVLTNSGLGSFKPPRSLK 277
+ +T++GL + SLK
Sbjct: 389 VPSTEITDNGLKGLRGLSSLK 409
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 2 FPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG----- 54
RL+ + + T G+ ++ +S LE L L N I + +G + L ++ G
Sbjct: 288 LTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITN--QGMKEIGKLKNLTNLGLFDVQ 345
Query: 55 --TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
+N+ ++T L+ +S+ L + LT +L L + S+ I D+ ++ +
Sbjct: 346 LTDAGLNQLRGLQRLDTLSLNNNPISDEGLRQVGALT---SLTFLSVPSTEITDNGLKGL 402
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
+ ++L+NL L++TR S G+ L G L NLE L L+GT++ + + + SL +
Sbjct: 403 RGL-SSLKNLCLASTRISDDGLKGLIG-LNNLEQLDLAGTRVTGTGVGPLRELESLHSLG 460
Query: 173 ISNTDI 178
+SNT I
Sbjct: 461 LSNTQI 466
>gi|59802548|gb|AAX07514.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 250
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +K L L+L + + D ++ ++ + L +L L T+ + AG+ LA L NL L
Sbjct: 39 LAPLKNLTQLNLCLTKVTDAGLKELSPL-TKLTHLCLMQTKVTDAGLKELA-PLTNLTTL 96
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
L TQ+ D + ++ + +L + + +T + TD L L L L L
Sbjct: 97 ELGSTQVTDAGLKELAPLTNLTVLTLGSTQV----------TDA--GLKELAPLKSLTLL 144
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L +TQ+++A + L+ F +L L L +TD + L+ +KLT L++ ++T++ L
Sbjct: 145 ELGETQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGGTLVTDTCL 204
Query: 268 GSFKPPRSLKLLDL 281
P ++L L L
Sbjct: 205 KDLAPLKNLAFLSL 218
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NL LNL T+ + AG+ L+ L L L L T++ D + ++ + +L +++ +T
Sbjct: 44 NLTQLNLCLTKVTDAGLKELS-PLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQ 102
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ TD L L L +L L L TQV+DA L L+ K L L L
Sbjct: 103 V----------TDA--GLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGETQ 150
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+T+ + +L+ +KLT L + +T++G+ P L L+L GG L+T+
Sbjct: 151 ITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNL-GGTLVTD 201
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L L L +L +LNL T+V+DA L LS +L HL L +TD L +L+ L+ LT
Sbjct: 36 LKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTT 95
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L + +T++GL P +L +L L
Sbjct: 96 LELGSTQVTDAGLKELAPLTNLTVLTL 122
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
L L L L L L QT+V+DA L L+ L L L + +TD L +L+ L+ LT
Sbjct: 59 GLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLT 118
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 296
L++ +T++GL P +SL LL+L G +TE I +
Sbjct: 119 VLTLGSTQVTDAGLKELAPLKSLTLLEL-GETQITEAGIKELA 160
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 213 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
+V+DA L L+ K L L+L +TD L +LS L+KLT+L + +T++GL P
Sbjct: 30 KVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAP 89
Query: 273 PRSLKLLDL 281
+L L+L
Sbjct: 90 LTNLTTLEL 98
>gi|430746594|ref|YP_007205723.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
gi|430018314|gb|AGA30028.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
Length = 170
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L+ L + NTR AG+ LA H P + L L GT+I D + + M SL + + T I
Sbjct: 23 LKRLAIENTRVGDAGMAQLASH-PGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGI 81
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
TD L L ++ LERL+L T++SDA + L K L + ++
Sbjct: 82 ----------TDA--GLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKG---LDIVETNV 126
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
TD S+ + +L ++ R + +T +G
Sbjct: 127 TDRSIPIIGGFERLEAINPRGSKITEAG 154
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
+ L+L T+++DA L PL K L+HLSLR +TD L L+ + +L L + ++
Sbjct: 47 IAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTKIS 106
Query: 264 NSGLGSFKPPRSLKLLDLH---------GGW-----------LLTEDAILQFCKMHPRIE 303
++G+ K + L +++ + GG+ +TE Q KM P+++
Sbjct: 107 DAGIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKMLPKLD 166
Query: 304 VWH 306
+ H
Sbjct: 167 IDH 169
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
L+RL +E T+V DA + L++ + L L +TD L L + L +LS+R +T
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 264 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
++GL L+ LDL G+ DA ++ K
Sbjct: 83 DAGLAHLAGMDRLERLDL--GYTKISDAGIEHLK 114
>gi|290993170|ref|XP_002679206.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092822|gb|EFC46462.1| leucine rich repeat protein [Naegleria gruberi]
Length = 527
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 62 EAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVA----- 113
E YI E L++L V ++ +S +L ++K L L + S+ +G + + ++
Sbjct: 136 EGVRYISELKQLAYLSVHSNDISDDGVKYLRELKQLTTLIIFSNRVGSEGCKCISELKQL 195
Query: 114 ---CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
C+ N N +N R S G ++ L L L + I+D Y+S + L +
Sbjct: 196 TSLCIDDNHINDEGANNRVGSEGCKCIS-ELKQLTSLCIDDNHINDEGAKYLSELAQLTY 254
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 230
+DIS+ + G E +S LN LE+LN+ Q + D L +L
Sbjct: 255 LDISSNGL-------GNEGTKYIS-----TLNQLEKLNISQNYIGDEGLEYFGKLSQLTS 302
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
L L N + LS L +LT L I + + G F + L
Sbjct: 303 LELSNNKIGTEGAKYLSELKQLTQLDIEYNKIGDKGAMYFGELKQL 348
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 39/270 (14%)
Query: 58 INEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACV 115
IN+ A E + L++LD+S++ L +++ + LE L++S + IGD+ +E +
Sbjct: 238 INDEGAKYLSELAQLTYLDISSNGLGNEGTKYISTLNQLEKLNISQNYIGDEGLEYFGKL 297
Query: 116 GANLRNLNLSNTRFSSAGVGILA-----------------------GHLPNLEILSLSGT 152
+ L +L LSN + + G L+ G L L L ++
Sbjct: 298 -SQLTSLELSNNKIGTEGAKYLSELKQLTQLDIEYNKIGDKGAMYFGELKQLVNLIINNN 356
Query: 153 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 212
+I + + Y+ + L ++DIS ++G E + + L L +N+ +
Sbjct: 357 RIGNDGVKYIGELKQLIYLDISEN-------RIGNE-----GIKYIGELKQLTDVNISEN 404
Query: 213 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
++ + + +L L L N ++ + +S L +L L + + + N G
Sbjct: 405 RIGNEGAKYIGQLSQLTSLYLSNNNIGNEGAKYISELKELIYLYMNNNKIRNEGAKYISE 464
Query: 273 PRSLKLLDLHGGWLLTEDAILQFCKMHPRI 302
+ + LD+ G + E+ I +M I
Sbjct: 465 MKQVTQLDI-GNNYIGEEGIKYISEMKQLI 493
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++++K L L + + I D+ + ++ + A L L++S+ + G ++ L LE L
Sbjct: 222 ISELKQLTSLCIDDNHINDEGAKYLSEL-AQLTYLDISSNGLGNEGTKYIS-TLNQLEKL 279
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
++S I D + Y + L +++SN ++G E LS L L +L
Sbjct: 280 NISQNYIGDEGLEYFGKLSQLTSLELSNN-------KIGTEGAKYLS-----ELKQLTQL 327
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
++E ++ D K+L++L + N + + + + L +L L I + + N G+
Sbjct: 328 DIEYNKIGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLIYLDISENRIGNEGI 387
Query: 268 GSFKPPRSL 276
+ L
Sbjct: 388 KYIGELKQL 396
>gi|329905907|ref|ZP_08274287.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547418|gb|EGF32242.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
Length = 552
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 29/280 (10%)
Query: 13 TGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 70
TG+ L N++SL LN+ CT D+ LE N LA+++LAG I +++
Sbjct: 77 TGLAHLGNMASLTQLNVRQCTNITDAGLEQLANLPRLARLNLAGCHRITA-AGIAHLKKL 135
Query: 71 LLSFLDVSNSSLSRFCFLTQMKA--LEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSN- 126
L++LD+S S + +KA L L+LS + GD+ +A V L+ L+LS
Sbjct: 136 PLTYLDLSGCSGISNAAIAHLKAHQLTELNLSDCTGFGDEGFAHLAEV--PLQTLDLSGC 193
Query: 127 TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
T F+++G+ L + L LSL TQ+D A + SL+ +D++
Sbjct: 194 TGFTNSGLRFL--NKSTLTRLSLRNCTQLDFGATFRLYGAQSLRHLDLA----------- 240
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLR-NASLTDVSL 243
G E +LTALQ+L LE L+L + T ++D L L+ L +L+L A +TD +L
Sbjct: 241 GCEGLDNTALTALQDLP-LEHLDLARNTFLNDTGLESLAEMTSLRYLNLSGGADMTDAAL 299
Query: 244 HQLSSLSKLTNLSIRDA-VLTNSGLG--SFKPPRSLKLLD 280
L+ L L +L + + T++GL S P +L+L+D
Sbjct: 300 AHLAELPALQHLILNNCRRTTDAGLAQLSHLPLETLELVD 339
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 47/271 (17%)
Query: 72 LSFLDVSNSSL---SRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSN- 126
L+ L++SN+S + L + AL+ LDL + IGD + + + A+L LN+
Sbjct: 38 LTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNM-ASLTQLNVRQC 96
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTD--IKGFIQ 183
T + AG+ LA +LP L L+L+G +I I+++ +P L ++D+S I
Sbjct: 97 TNITDAGLEQLA-NLPRLARLNLAGCHRITAAGIAHLKKLP-LTYLDLSGCSGISNAAIA 154
Query: 184 QVGAE--TDLVLS-LTAL--QNLNHLERLNLEQTQVSDATLFPLSTFK-----ELIHLSL 233
+ A T+L LS T + HL + L+ +S T F S + L LSL
Sbjct: 155 HLKAHQLTELNLSDCTGFGDEGFAHLAEVPLQTLDLSGCTGFTNSGLRFLNKSTLTRLSL 214
Query: 234 RNASLTDV----------SLHQL----------SSLSKLTNLSI------RDAVLTNSGL 267
RN + D SL L ++L+ L +L + R+ L ++GL
Sbjct: 215 RNCTQLDFGATFRLYGAQSLRHLDLAGCEGLDNTALTALQDLPLEHLDLARNTFLNDTGL 274
Query: 268 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
S SL+ L+L GG +T+ A+ ++
Sbjct: 275 ESLAEMTSLRYLNLSGGADMTDAALAHLAEL 305
>gi|303286333|ref|XP_003062456.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455973|gb|EEH53275.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
L L++S + DD++ + + NLR+L+L R S GV L G L +L L+L T+
Sbjct: 218 LVALNVSGCAMNDDALHFLGGL-INLRSLSLERCRVSDVGVRQLCG-LRDLRELNLGYTR 275
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 213
+ + + ++ + L+ + N D G + G E + LE L + T
Sbjct: 276 VTNDGVLALAPLTELRVV---NLDSLGDVGDAGMEV--------ARRWEKLESLCVSDTG 324
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
V D + L + L L+L ++TD L L ++ L NL++ ++T+ G+
Sbjct: 325 VGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDSRLITDDGVRHLANL 384
Query: 274 RSLKLLDLHGGWLLTEDAILQFCKMHPRIE 303
+L +DL G + E A F K P++E
Sbjct: 385 GALTAIDLFGAKISDEGASRLF-KCTPKLE 413
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
+T I+ + + GA D +L L L LN+ ++D L L L LSL
Sbjct: 191 STPIELSLARTGANADTARALGQLAG--RLVALNVSGCAMNDDALHFLGGLINLRSLSLE 248
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 294
++DV + QL L L L++ +TN G+ + P L++++L DA ++
Sbjct: 249 RCRVSDVGVRQLCGLRDLRELNLGYTRVTNDGVLALAPLTELRVVNLD-SLGDVGDAGME 307
Query: 295 FCKMHPRIEVWHELSVICPSDQ-IGSNGPSPSRTSLR 330
+ W +L +C SD +G G ++ R
Sbjct: 308 VARR------WEKLESLCVSDTGVGDGGVRKLKSCAR 338
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 40/188 (21%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L + +V++ L L M +L +L+L S +I DD V +A +GA L ++L + S
Sbjct: 344 LGYTNVTDDGLE---HLEDMTSLRNLNLDSRLITDDGVRHLANLGA-LTAIDLFGAKISD 399
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G L P LE L L G + + + ++
Sbjct: 400 EGASRLFKCTPKLERLELCGGSLTNVGVKRIA---------------------------- 431
Query: 192 VLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
++ ++ LN+ +++D + + T +EL L+L + +T + +L++L
Sbjct: 432 -------EHCKGMKTLNIGRNAKITDDCVDDVVTMRELTSLNLAFSKITSDGVRKLAALP 484
Query: 251 KLTNLSIR 258
LT+L+I+
Sbjct: 485 CLTSLAIK 492
>gi|46447560|ref|YP_008925.1| hypothetical protein pc1926 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401201|emb|CAF24650.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 761
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 158/314 (50%), Gaps = 31/314 (9%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLY 66
N+ G+ L +++L+ LNLS C D+ LE L ++ L+ + +
Sbjct: 431 NITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCYKLTDAGFAHL 490
Query: 67 IETSLLSFLDVSNSSL---SRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNL 122
+ L +LD+S+ + + LT + AL++LDLS+ + + DD + + + A L++L
Sbjct: 491 TPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMA-LQHL 549
Query: 123 NLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN----- 175
NLS+ + + AG L+ L L+ L LS Q + D +++++ + +L+ +D+
Sbjct: 550 NLSSCYKLTDAGFAHLSP-LTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLT 608
Query: 176 ----------TDIKGF-IQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLS 223
TD++ ++ G TD L+ LT L L HL+ + E+ ++DA L L
Sbjct: 609 DAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCEK--LTDAGLVHLK 666
Query: 224 TFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 281
+L +L+L R +LTD L L+ L+ L +L +R + LT++GL P L+ LDL
Sbjct: 667 LLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTGLQRLDL 726
Query: 282 HGGWLLTEDAILQF 295
W LT+ ++
Sbjct: 727 SQCWNLTDAGLIHL 740
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 143/325 (44%), Gaps = 59/325 (18%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCT--IDSILE----------------------GNENK 44
NL G+ L +++L+ LNLS C D+ LE G +
Sbjct: 331 NLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHL 390
Query: 45 APLA-----------KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 93
PL K++ G T +N A Y+ S +++N+ L LT A
Sbjct: 391 TPLMALQHLDLSICNKLTDRGLTHLNPLTALQYLNLSQCD--NITNAGLEHLIPLT---A 445
Query: 94 LEHLDLSS-SMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSG 151
L++L+LS + D +E + + A L+ L+LS + + AG L L L+ L LS
Sbjct: 446 LQYLNLSQCEKLTDAGLEHLTPLTA-LQQLDLSWCYKLTDAGFAHLTP-LTGLQYLDLSH 503
Query: 152 T-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
++ D +++++ + +L+++D+SN + D + LT L L H LNL
Sbjct: 504 CNKLTDAGLAHLTPLTALQYLDLSNC--------IKLTDDGLAHLTPLMALQH---LNLS 552
Query: 211 QT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 267
+++DA LS L L L +LTD L L+ L+ L L +R LT++GL
Sbjct: 553 SCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGL 612
Query: 268 GSFKPPRSLKLLDLHGGWLLTEDAI 292
K L+ L+L G LT+ +
Sbjct: 613 VHLKLLTDLQYLNLRGCGYLTDAGL 637
>gi|406830574|ref|ZP_11090168.1| hypothetical protein SpalD1_03019 [Schlesneria paludicola DSM
18645]
Length = 404
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 123/287 (42%), Gaps = 45/287 (15%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
FP L L+L+ T G+ +L + SL L+L+N + + A K+
Sbjct: 74 FPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKN--------AQFKKL------ 119
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK--ALEHLDLSSSMIGDDSVEMVAC 114
IE L+ LDV+++ +S + L L LS + I + + ++
Sbjct: 120 ----------IELDSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSK 169
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
G L L+L+ TR S G+ L L NL L LSG I D + + + LK +D++
Sbjct: 170 FG-QLAILDLTQTRVSDEGMTALK-RLENLTELRLSGNVITDTGLEAIGGLSHLKILDLT 227
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
T I TD L L+ LN+L L L + QV D + L LI L
Sbjct: 228 ATQI----------TDA--GLKHLRGLNNLNELKLGRNQVKDNGVNALVEIPTLIALDFY 275
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+TD L L ++ LT L + +++ GL + R+LK + L
Sbjct: 276 ATQITDECLSALGQIANLTTLDLGKNPISDFGLRNLTRLRNLKEIGL 322
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--FIQQVG 186
F+ A V +L P LE L LSGTQI I+ +S++ SL + ++N +K F + +
Sbjct: 63 FTDADVTLLK-TFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLIE 121
Query: 187 AET-------DLVLSLTALQN-LNH--LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ D +S ALQ + H L L L ++++A L LS F +L L L
Sbjct: 122 LDSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQLAILDLTQT 181
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++D + L L LT L + V+T++GL + LK+LDL
Sbjct: 182 RVSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDL 226
>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum PSI07]
Length = 533
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 81/195 (41%), Gaps = 14/195 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L L
Sbjct: 280 LAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTSL 337
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+ I D ++ SL + I + I GA+ AL L L
Sbjct: 338 RIDSNNIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTTL 385
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
NL + DA S LI LS+R L+D L++ +T L D + ++G
Sbjct: 386 NLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAGA 445
Query: 268 GSFKPPRSLKLLDLH 282
+ R+L LD+
Sbjct: 446 RALAANRTLTTLDVR 460
>gi|149918767|ref|ZP_01907254.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
gi|149820368|gb|EDM79784.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
Length = 541
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS--LAGTTFINEREA------- 63
G+ L +LE L L C +DS EG A L ++ + G + + +A
Sbjct: 326 AGLVHLAENPALEDLTLRGCDLDS--EGFTALAALPRLRRLIVGPASLLDGKAEGLGLLV 383
Query: 64 -FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
+E L F D + L+ L E LDL ++ + D+ +E +A + LR L
Sbjct: 384 SLRELELGLDGFGDRAAQELAPLVNL------ERLDLGNTAVSDEGLEHLAGM-VRLREL 436
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
L +TR + G+ L G L LEIL L T + D +++++ + +L+ + + NT I
Sbjct: 437 ELHHTRVTRHGLEHLQG-LSALEILELDHTDVVDEGVAHLAKLGALRELRLDNT----LI 491
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
VG + L L+ LERLNL T V+ + LS L
Sbjct: 492 TDVG--------VAHLAKLSDLERLNLANTVVTSEGVEVLSALPRL 529
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
L+ L L + +SAG+ LA + P LE L+L G +D + ++ +P L+ + +
Sbjct: 312 GLQVLELERSAVTSAGLVHLAEN-PALEDLTLRGCDLDSEGFTALAALPRLRRLIVGPAS 370
Query: 178 I-KGFIQQVG-----AETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
+ G + +G E +L L + L L +LERL+L T VSD L L+
Sbjct: 371 LLDGKAEGLGLLVSLRELELGLDGFGDRAAQELAPLVNLERLDLGNTAVSDEGLEHLAGM 430
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 285
L L L + +T L L LS L L + + + G+ +L+ L L
Sbjct: 431 VRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAKLGALRELRLD-NT 489
Query: 286 LLTEDAILQFCKM 298
L+T+ + K+
Sbjct: 490 LITDVGVAHLAKL 502
>gi|423616588|ref|ZP_17592422.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
gi|401258404|gb|EJR64590.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
Length = 590
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKILYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLRS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 56/210 (26%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ V L + N++IL ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKILYVAGNQIED---------------------------------- 322
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PL + K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLRSLKNVTYLTL--------AGNQVEDIT 368
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L L ++D VLT + + L LD
Sbjct: 369 PLYALPLKDLVLTRNKVKDLSGIDQLNQLD 398
>gi|255553315|ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus communis]
gi|223543332|gb|EEF44864.1| F-box/LRR-repeat protein, putative [Ricinus communis]
Length = 529
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 42/236 (17%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F D+S++ L LT LE L+L S I D+ + + + +L+ L LS+T S
Sbjct: 285 LGFNDISDACLVHLKGLTN---LESLNLDSCRIDDEGLANLTGL-RHLKCLVLSDTEVGS 340
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
+G+ L+G L NLE ++LS T I D I +S + SLK +++ I TD
Sbjct: 341 SGLRHLSG-LTNLESINLSFTMITDGGIRKLSGLSSLKSLNLDARQI----------TDS 389
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL------------------ 233
L AL NL L L+L +++D+ L FK L L +
Sbjct: 390 --GLAALTNLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEICGGGLTDAGIRNIKDLSS 447
Query: 234 -------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+N +LTD SL +S L+ L +L++ ++ +T++GL KP ++LK L L
Sbjct: 448 LSLLNLSQNCNLTDKSLELISGLTGLVSLNVSNSRITSAGLQHLKPLKNLKSLTLE 503
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
+ DD E + +G L+ LNL S A + L G L NLE L+L +IDD ++ ++
Sbjct: 266 LSDDGCEAFSKLG-RLKVLNLGFNDISDACLVHLKG-LTNLESLNLDSCRIDDEGLANLT 323
Query: 164 MMPSLKFIDISNTDI-KGFIQQVGAETDLV---LSLTALQN--------LNHLERLNLEQ 211
+ LK + +S+T++ ++ + T+L LS T + + L+ L+ LNL+
Sbjct: 324 GLRHLKCLVLSDTEVGSSGLRHLSGLTNLESINLSFTMITDGGIRKLSGLSSLKSLNLDA 383
Query: 212 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
Q++D+ L L+ L HL L A +TD H L + L +L I LT++G+ + K
Sbjct: 384 RQITDSGLAALTNLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEICGGGLTDAGIRNIK 443
>gi|169823733|ref|YP_001691344.1| N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC 29328]
gi|167830538|dbj|BAG07454.1| N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC 29328]
Length = 1554
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 72 LSFLDV-SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF 129
+ LD+ +N + F FL ++ LE +D+ V++ VG + LR+LNL + +
Sbjct: 147 IRLLDIRNNDKVKDFEFLKKLNNLEQVDMHEVY----HVDLSNFVGKSKLRSLNLQSCKI 202
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
S L L L+LS +ID+ I + + +L+F+DISN + +I G E
Sbjct: 203 SDLKP---LKDLKELRYLNLSFNKIDN--IEALKDLTNLRFLDISNQNRFDYI--AGVER 255
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
++ SL L+ L L L VSD T PL+ +L ++L N + D +L+S
Sbjct: 256 PMIDSLKPLEGLAELSELAFSSHNVSDLT--PLTKLTKLKKVTLTNNKIKDSEFKKLNS 312
>gi|290994342|ref|XP_002679791.1| predicted protein [Naegleria gruberi]
gi|284093409|gb|EFC47047.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 24/286 (8%)
Query: 1 MFPRLSFLNLA--WTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTF 57
M L+ LN++ W G IS L+ L + + + I+ N + + +I+
Sbjct: 1 MKHNLTSLNISRNWIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVGL 60
Query: 58 IN-EREAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA 113
N +E YI E L+ L+++N+++ F++ +K L L + + IGD + ++
Sbjct: 61 NNLGKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLS 120
Query: 114 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
+ L LN+ GV + + L L +S I Y+S M L+ +DI
Sbjct: 121 EL-KQLTRLNIGENNIGDEGVKHIL-EMKQLTDLDISNNNIRHKGSEYISGMNQLRILDI 178
Query: 174 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
++ +I +GA+ + + L LN+ Q D +S K+L L L
Sbjct: 179 NSCNI----DPIGAQ--------KISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLEL 226
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
N ++D+ +S +SKLTNL I + L++ G+ + ++KL+
Sbjct: 227 FNCDISDIGAKCVSEMSKLTNLDIGENNLSDEGV---RAVSNMKLM 269
>gi|168701212|ref|ZP_02733489.1| hypothetical protein GobsU_16936 [Gemmata obscuriglobus UQM 2246]
Length = 410
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 14 GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
G L + L L L I D+ LE N APL +++ TF +A L
Sbjct: 201 GARTLATMPQLRVLGLEGTKITDAALE---NLAPLTELTEIDLTFTKVTDAGL------- 250
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
L+RF LT+++ LSS+ + D V +A + L +L+LS T+
Sbjct: 251 -------KHLARFKKLTRVR------LSSTAVTDAGVRELAAL-PELTDLDLSYTKAGDG 296
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
GV LA L +SL T++ D ++ P L +++ T +VG D V
Sbjct: 297 GVTALAAAPNRLTSVSLEKTRVGDEGAKALAAAPGLTRLNLGYT-------RVG--DDGV 347
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
+L A NL L L T+V+D + L ++L ++ LR +TD ++ +L
Sbjct: 348 SALAAAPNLTGL---TLVATRVTDDGVRSLFACRKLAYVELRETEVTDGAIREL 398
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 26/277 (9%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 63
RL+ ++ G+ L + L L+L + + G+ I+ AG +NE A
Sbjct: 132 RLNGASITDAGLKHLAALDGLSALSLHGTSRGATSAGSYRG-----ITDAG---LNELRA 183
Query: 64 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
+ L ++V+++ + Q++ L L + I D ++E +A + L ++
Sbjct: 184 IKGLTDLSLGGIEVTDAGARTLATMPQLRVL---GLEGTKITDAALENLAPL-TELTEID 239
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK-GFI 182
L+ T+ + AG+ LA L + LS T + D + ++ +P L +D+S T G +
Sbjct: 240 LTFTKVTDAGLKHLA-RFKKLTRVRLSSTAVTDAGVRELAALPELTDLDLSYTKAGDGGV 298
Query: 183 QQVGAETDLVLSLT------------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 230
+ A + + S++ AL L RLNL T+V D + L+ L
Sbjct: 299 TALAAAPNRLTSVSLEKTRVGDEGAKALAAAPGLTRLNLGYTRVGDDGVSALAAAPNLTG 358
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L+L +TD + L + KL + +R+ +T+ +
Sbjct: 359 LTLVATRVTDDGVRSLFACRKLAYVELRETEVTDGAI 395
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD--------IKGF------- 181
LAG PNL +L L+G I D + +++ + L + + T +G
Sbjct: 122 LAGQ-PNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTSRGATSAGSYRGITDAGLNE 180
Query: 182 IQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
++ + TDL L L + L L LE T+++DA L L+ EL + L
Sbjct: 181 LRAIKGLTDLSLGGIEVTDAGARTLATMPQLRVLGLEGTKITDAALENLAPLTELTEIDL 240
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+TD L L+ KLT + + +T++G+
Sbjct: 241 TFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAGV 274
>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 58 INEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACV 115
IN+ A IE L+ LD+ + + +++MK L LD+S + IGD V+ ++ +
Sbjct: 113 INDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKM 172
Query: 116 GANLRNLNLSNTRFSSAGVGILA-----------------------GHLPNLEILSLSGT 152
L +LN+ N AG + L L L++SG
Sbjct: 173 -KQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVSGN 231
Query: 153 QIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
QI D I +S M L +DIS I KG + + + L LN+
Sbjct: 232 QIGDEGIKLISEMKQLTLLDISGNSIGDKG--------------VKPISKMKQLTSLNIY 277
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
++ A + K+L L + + D +S + +LT+L+I + + G+
Sbjct: 278 NNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGDEGIKLI 337
Query: 271 KPPRSLKLLDLHG 283
+ L LLD+ G
Sbjct: 338 SEMKQLTLLDISG 350
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 132/336 (39%), Gaps = 71/336 (21%)
Query: 3 PRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK----------- 49
RL+ L++ G + IS ++ L L + + +SI G++ P++K
Sbjct: 125 KRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSI--GDKGVKPISKMKQLTSLNIYN 182
Query: 50 --ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT------------------ 89
I +AG+ FI E + ++ S D S+S LT
Sbjct: 183 NEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVSGNQIGDEGIKLIS 242
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL--AGHLPNLEI- 146
+MK L LD+S + IGD V+ ++ + L +LN+ N AG + L +L+I
Sbjct: 243 EMKQLTLLDISGNSIGDKGVKPISKM-KQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDIS 301
Query: 147 --------------------LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
L++SG QI D I +S M L +DIS + VG
Sbjct: 302 YNEIGDEGAKSISEMKQLTSLTISGNQIGDEGIKLISEMKQLTLLDISG-------KSVG 354
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
+ + ++ + L L + ++ A +S K+L L + + D +
Sbjct: 355 DK-----GVKSISKMKQLTSLTIYTNEIGVAGAKFISEMKQLTSLDISYNEIGDEGAKSI 409
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
S L +LT L I + + G + LK LD+
Sbjct: 410 SELKQLTLLDISGNGIGDEGSKFIIGMKQLKSLDIQ 445
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 42/205 (20%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S+ F+++MK L L++S++ I D++ + +
Sbjct: 90 SIENHKFISEMKQLTSLNISNNQINDETAKSII--------------------------E 123
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTAL 198
+ L L + G QI D I +S M L +DIS I KG + +
Sbjct: 124 MKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKG--------------VKPI 169
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+ L LN+ ++ A + K+L L + + D +S L +LT+L++
Sbjct: 170 SKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVS 229
Query: 259 DAVLTNSGLGSFKPPRSLKLLDLHG 283
+ + G+ + L LLD+ G
Sbjct: 230 GNQIGDEGIKLISEMKQLTLLDISG 254
>gi|290984031|ref|XP_002674731.1| predicted protein [Naegleria gruberi]
gi|284088323|gb|EFC41987.1| predicted protein [Naegleria gruberi]
Length = 356
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 29/253 (11%)
Query: 40 GNENKAPLAKISLAGTTFI--NE--REAFLYI-ETSLLSFLDVS--NSSLSRFCFLTQMK 92
GNE ++K+ +I NE E YI E + L LD+S N + +++++K
Sbjct: 111 GNEGAKYISKLKQLTHLYILNNEIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISELK 170
Query: 93 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 152
L +LD+S + IG + + +A + L LN+S G + G L L L++
Sbjct: 171 QLTNLDISVNHIGAEGAQHIAEMNQ-LTILNISTNNIGYEGAKYI-GKLKQLTCLTIFNN 228
Query: 153 QIDDYAISYMSMMPSLKFIDIS--NTDIKG--FIQQVGAETDLVLSLTALQNLNHLERLN 208
ID Y+S M L ++IS N D++G +I ++ TDL +S+
Sbjct: 229 NIDVEGAKYISEMKQLTDLNISYNNIDVEGAKYISELKQLTDLDISIN------------ 276
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
Q+ + ++ +L LS + ++ D +S + +LTNL I + ++N G+
Sbjct: 277 ----QIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEMKQLTNLDISNNSISNEGVK 332
Query: 269 SFKPPRSLKLLDL 281
+ + L +L++
Sbjct: 333 CIEEMKHLTVLNI 345
>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+++MK L LD+S + IG + + ++ + L +LN+ R + GV +++ + L
Sbjct: 189 FISEMKQLTSLDISVNEIGVEGAKFISEM-KQLTSLNICYNRIGAEGVKLIS-EMKQLTS 246
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN------ 200
L + G +I D ++S M L ++I I + +E + SL A N
Sbjct: 247 LDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEMKQLTSLGAYNNEIGVEG 306
Query: 201 ------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+ L LN+ + Q+ D +S K+L L + + D + +S + +L +
Sbjct: 307 TKLISEMKQLTSLNISKNQIGDEGAKLISEMKQLASLDIYYNEIGDEGVKLISEMKQLKS 366
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L+I + + G + L LD+H
Sbjct: 367 LNISKNQIGDEGAKLISEMKQLTSLDIH 394
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 68 ETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
E L+ LD+ + + F+++MK L L++ + IGD+ + ++ + L +L
Sbjct: 240 EMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEM-KQLTSLGAY 298
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
N G +++ + L L++S QI D +S M L +DI + ++
Sbjct: 299 NNEIGVEGTKLIS-EMKQLTSLNISKNQIGDEGAKLISEMKQLASLDI-------YYNEI 350
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
G E + + + L+ LN+ + Q+ D +S K+L L + + D +
Sbjct: 351 GDE-----GVKLISEMKQLKSLNISKNQIGDEGAKLISEMKQLTSLDIHFNEIGDEGVKL 405
Query: 246 LSSLSKLTNLSI 257
+S + +LT+LSI
Sbjct: 406 ISEMKQLTSLSI 417
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 39/256 (15%)
Query: 46 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSM 103
L + + G +E F+ E L+ L + N+ + F F+++MK L LD+ +
Sbjct: 51 QLTSLDIGGNQIGDEGAKFIS-EMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNE 109
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEI--------------- 146
IGD+ V+ + C L +L++ N R GV ++ L +L+I
Sbjct: 110 IGDEGVKSI-CEMKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICE 168
Query: 147 ------LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
LS+ Q ++S M L +DIS + ++G E +S
Sbjct: 169 MKQLTSLSIYNNQTGAVGAKFISEMKQLTSLDIS-------VNEIGVEGAKFIS-----E 216
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ L LN+ ++ + +S K+L L + + D +S + +LT+L+I +
Sbjct: 217 MKQLTSLNICYNRIGAEGVKLISEMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICEN 276
Query: 261 VLTNSGLGSFKPPRSL 276
+ + G S + L
Sbjct: 277 QIGDEGAKSISEMKQL 292
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
MK L+ LD+ + IG + ++ + L +L++ R + G +++ + L L +
Sbjct: 1 MKQLKSLDIGENQIGAVGAKFISEM-KQLTSLDIIYNRIGAVGAKLIS-KMKQLTSLDIG 58
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVL--------SLTAL 198
G QI D ++S M L + I N I FI ++ T L + + ++
Sbjct: 59 GNQIGDEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEGVKSI 118
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ L L++ ++ D + +S K+L L + N + + + +LT+LSI
Sbjct: 119 CEMKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTSLSI 177
>gi|290984426|ref|XP_002674928.1| predicted protein [Naegleria gruberi]
gi|284088521|gb|EFC42184.1| predicted protein [Naegleria gruberi]
Length = 612
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 50/318 (15%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDS-------------ILEGNENKAPLAKIS 51
+S + + G + L CLN++ C+ID +L +EN+ IS
Sbjct: 215 ISRIKIGSGGAQYIGKFEQLTCLNINTCSIDDKVLQSISQLKKLIVLHISENE-----IS 269
Query: 52 LAGTTFINEREAF--LYI--------------ETSLLSFLDVSNSSLSR--FCFLTQMKA 93
+ G +I++ LYI E L++LDV+ + + ++ MK
Sbjct: 270 IEGAKYISKLNQLTSLYISESGIRSEQARYISELKQLTYLDVTKNYVREEGAKYIRNMKK 329
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
L L +S + + + E ++ + L L++S + GV + L L LS+ +
Sbjct: 330 LTTLLVSENYVCEQGAEYISEM-TQLTKLDISVNNINKKGVFHIC-KLKQLTELSILESH 387
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 213
D + Y+S + +L ++ ++++G + + + LN L LN+ +
Sbjct: 388 FDGEGLEYISELKNLTILNFPYSEMRG------------VGVKYISQLNQLTCLNIPYNR 435
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+SD +S K+L LS+ + S++ + L+ L LT L I L N G
Sbjct: 436 ISDEGAKYISELKQLKELSISDNSISSEGANYLTDLKNLTKLVITGNNLGNDGAMHISEL 495
Query: 274 RSLKLLDLHGGWLLTEDA 291
+ L +LD+ + +E A
Sbjct: 496 KKLTILDISHNSISSEGA 513
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ Q+K L L++ I D+ VE +A + L +L +S S GV I++ L
Sbjct: 105 YIGQLKQLTSLEIQGMDIDDEHVESMAEL-KQLTSLYISGNYIGSEGVKIISESFNKLTK 163
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++S ID+ Y+S + L ++I+ D +G + LS L HL
Sbjct: 164 LNISANYIDNVGAKYISQLKQLTSLEIACND------SIGDAGIIYLS-----GLEHLTN 212
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++ + ++ + F++L L++ S+ D L +S L KL L I + ++ G
Sbjct: 213 LDISRIKIGSGGAQYIGKFEQLTCLNINTCSIDDKVLQSISQLKKLIVLHISENEISIEG 272
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+++Q+ L L++ + I D+ + ++ + L+ L++S+ SS G L L NL
Sbjct: 419 YISQLNQLTCLNIPYNRISDEGAKYISEL-KQLKELSISDNSISSEGANYLT-DLKNLTK 476
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L ++G + + ++S + L +DIS+ I GA+ L +L +L
Sbjct: 477 LVITGNNLGNDGAMHISELKKLTILDISHNSISS----EGAK--------HLSDLKNLTE 524
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L ++ + + +S K+L HL + + +++D +S +++LT LSI + ++ G
Sbjct: 525 LVIKGNNLGNDGAMSISELKQLTHLDVCDNNISDEGFKAISKMNQLTRLSIYENSISGEG 584
Query: 267 LGSFKPPRSLKLLDLH 282
+ + +D+
Sbjct: 585 VEFIRKMTQSTFIDIQ 600
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 29/246 (11%)
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE----TDL 191
IL + NL I + G +ID +++Y+ + L ++I DI + AE T L
Sbjct: 80 ILMKSVTNLCIPYVVGVKIDSESVTYIGQLKQLTSLEIQGMDIDDEHVESMAELKQLTSL 139
Query: 192 VLSLTAL---------QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDV 241
+S + ++ N L +LN+ + + +S K+L L + N S+ D
Sbjct: 140 YISGNYIGSEGVKIISESFNKLTKLNISANYIDNVGAKYISQLKQLTSLEIACNDSIGDA 199
Query: 242 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 301
+ LS L LTNL I + + G L L+++ + +D +LQ +
Sbjct: 200 GIIYLSGLEHLTNLDISRIKIGSGGAQYIGKFEQLTCLNINTCSI--DDKVLQSISQLKK 257
Query: 302 IEVWH----ELSV-----ICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRL 352
+ V H E+S+ I +Q+ S S + +R+ + + + ++LD
Sbjct: 258 LIVLHISENEISIEGAKYISKLNQLTS--LYISESGIRSEQARYISELKQL--TYLDVTK 313
Query: 353 KYSREE 358
Y REE
Sbjct: 314 NYVREE 319
>gi|406833162|ref|ZP_11092756.1| hypothetical protein SpalD1_16026 [Schlesneria paludicola DSM
18645]
Length = 447
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L+ +K L L L++S+I D VE + L L+LS+ + GV + +L L+ L
Sbjct: 128 LSGLKGLTSLALTNSVINDSGVETIVKSFPELTELDLSSNTNMTNGVVKIISNLGKLQRL 187
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+L QI+D +S + L+ +D+ G D+ L + A L HL+
Sbjct: 188 TLVQNQINDIGAQRLSKLQELRSLDLRGNMEAG---------DMTLEVVA--GLPHLQSF 236
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-------RDA 260
T V+D+ L LS + L L L++ +TD S L+ LSKL+ L I D
Sbjct: 237 KHRSTAVNDSGLEYLSQGQALESLLLQDFVITDQSGPHLAKLSKLSQLEIFRCQGFGSDG 296
Query: 261 VLTNSGLG 268
VL G+G
Sbjct: 297 VLALKGMG 304
>gi|226534322|gb|ACO71437.1| AT4G23840-like protein [Capsella rubella]
Length = 90
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINE 60
F LSFLNL+WT VT+ NI LECL+++ C I SI + + + A L K+ L+G TF E
Sbjct: 26 FSNLSFLNLSWTSVTQTLNIPHLECLHMNKCDIVSISKTHSSPLASLKKLVLSGATFSAE 85
Query: 61 REAF 64
E+F
Sbjct: 86 TESF 89
>gi|226534290|gb|ACO71421.1| AT4G23840-like protein [Capsella rubella]
gi|226534292|gb|ACO71422.1| AT4G23840-like protein [Capsella rubella]
gi|226534294|gb|ACO71423.1| AT4G23840-like protein [Capsella rubella]
gi|226534296|gb|ACO71424.1| AT4G23840-like protein [Capsella rubella]
gi|226534298|gb|ACO71425.1| AT4G23840-like protein [Capsella rubella]
gi|226534300|gb|ACO71426.1| AT4G23840-like protein [Capsella rubella]
gi|226534302|gb|ACO71427.1| AT4G23840-like protein [Capsella rubella]
gi|226534304|gb|ACO71428.1| AT4G23840-like protein [Capsella rubella]
gi|226534306|gb|ACO71429.1| AT4G23840-like protein [Capsella rubella]
gi|226534308|gb|ACO71430.1| AT4G23840-like protein [Capsella rubella]
gi|226534310|gb|ACO71431.1| AT4G23840-like protein [Capsella rubella]
gi|226534312|gb|ACO71432.1| AT4G23840-like protein [Capsella rubella]
gi|226534314|gb|ACO71433.1| AT4G23840-like protein [Capsella rubella]
gi|226534316|gb|ACO71434.1| AT4G23840-like protein [Capsella rubella]
gi|226534318|gb|ACO71435.1| AT4G23840-like protein [Capsella rubella]
gi|226534320|gb|ACO71436.1| AT4G23840-like protein [Capsella rubella]
gi|226534324|gb|ACO71438.1| AT4G23840-like protein [Capsella rubella]
gi|226534326|gb|ACO71439.1| AT4G23840-like protein [Capsella rubella]
gi|226534328|gb|ACO71440.1| AT4G23840-like protein [Capsella rubella]
gi|226534330|gb|ACO71441.1| AT4G23840-like protein [Capsella rubella]
gi|226534332|gb|ACO71442.1| AT4G23840-like protein [Capsella rubella]
gi|226534334|gb|ACO71443.1| AT4G23840-like protein [Capsella rubella]
gi|226534336|gb|ACO71444.1| AT4G23840-like protein [Capsella rubella]
gi|226534338|gb|ACO71445.1| AT4G23840-like protein [Capsella rubella]
gi|226534340|gb|ACO71446.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534346|gb|ACO71449.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534350|gb|ACO71451.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINE 60
F LSFLNL+WT VT+ NI LECL+++ C I SI + + + A L K+ L+G TF E
Sbjct: 26 FSNLSFLNLSWTSVTQTLNIPHLECLHMNKCDIVSISKTHSSPLASLKKLVLSGATFSAE 85
Query: 61 REAF 64
E+F
Sbjct: 86 TESF 89
>gi|46447569|ref|YP_008934.1| hypothetical protein pc1935 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401210|emb|CAF24659.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 504
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRF- 129
L F N + + +L + AL+HLDL+ + D + +A + A L++LNLS +
Sbjct: 255 LYFRKCPNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAHLAPLVA-LKHLNLSGHGYL 313
Query: 130 SSAGVGILAGHLPNLEILSLS---GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
+ AG+ L+ L L+ L+LS ++ D ++++ + +LK++++S + G
Sbjct: 314 TDAGLAHLSP-LTALQHLNLSECCNYKLTDAGLAHLRPLVALKYLNLSRCS-----KFTG 367
Query: 187 AETDLVLSLTALQNLN-----------------------HLERLNLEQTQVSDATLFPLS 223
A + LTALQ+LN L+ LNL V+D L L+
Sbjct: 368 AGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSWCGVTDDELAHLT 427
Query: 224 TFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 281
+ L +L L N LTD L L+ L L +L++ LTN+GL P +L+ L+L
Sbjct: 428 PLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKCDQLTNAGLAHLIPLTALQHLNL 487
Query: 282 HGGWLLTEDAI 292
G LT+D +
Sbjct: 488 SGCSNLTDDGL 498
>gi|290983152|ref|XP_002674293.1| predicted protein [Naegleria gruberi]
gi|284087882|gb|EFC41549.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S+ + F+T+MK L LD+S++ IGD+ V+ ++ + L +L + N GV +
Sbjct: 123 SIEKPTFITEMKQLTSLDISNNRIGDEGVKFISEM-KQLISLGIYNNGIGDEGVKSII-E 180
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+ L L + G QI D +S M L +DI+N Q G E + +
Sbjct: 181 MKRLTSLGIGGNQIGDEGAKSISEMKQLTSLDINNN-------QTGDE-----GVKFICE 228
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ L L + ++ D +S K+L L++ + D +S L +LT+L I
Sbjct: 229 MKQLTSLTIYNNRIGDEGAKSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYN 288
Query: 261 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+ + + LK LD+ G + E
Sbjct: 289 RIGDKEAKFICEMKQLKSLDIGGNQIGDE 317
>gi|290994542|ref|XP_002679891.1| predicted protein [Naegleria gruberi]
gi|284093509|gb|EFC47147.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 47/280 (16%)
Query: 43 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS-----RFCFLTQMKALEHL 97
N A LA + ++ + ER + + E + L+ L++S ++++ C +TQ L L
Sbjct: 61 NLAHLADLDISNNQLL-ERGSKIIREMTQLTKLNISRNNINAGGTKSICEMTQ---LTDL 116
Query: 98 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 157
D+S++ IG++ + + L NL++S G+ L H+ NL L++S +I D
Sbjct: 117 DISNNFIGNEGASYIGGM-TKLTNLSISENHIGVEGIKSLF-HINNLICLNISSCKIGDE 174
Query: 158 AISYMSMMPSLKFIDISNTDIKGFIQQVGAE----------------------------T 189
+S M L ++IS+ +I + + +E T
Sbjct: 175 GARLISEMKQLTTLEISHNEIGSYGSKAISEMYQLTKLNIRYNVLGNEGAHYIGIMEQLT 234
Query: 190 DLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+L +S +L L+ L +L++ ++ D + +S +L++L + + D+
Sbjct: 235 ELDISHNRISGEGAKSLSKLSQLTKLDINTNEIGDEGMKSISKLDQLLYLDIGENEIGDI 294
Query: 242 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ +SKLT L I D + N G S L LD+
Sbjct: 295 GTGLIIGMSKLTELLINDNRVGNDGAESLAQMHQLTQLDI 334
>gi|87306873|ref|ZP_01089019.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
gi|87290246|gb|EAQ82134.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
Length = 240
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 68/131 (51%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
LP+LE+L L G I A+ ++ +P L+ + + + I Q + T +L ++
Sbjct: 98 LPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITDVEQTLFRTTITDAALPSIAK 157
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L L L+L +T ++DA + PL+ +L L L + +TD ++ L+ L L +L + +
Sbjct: 158 LKTLRVLSLARTGITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKLKSLKHLYLHET 217
Query: 261 VLTNSGLGSFK 271
+T +G+ +
Sbjct: 218 PITAAGVKRLQ 228
>gi|325109499|ref|YP_004270567.1| hypothetical protein Plabr_2946 [Planctomyces brasiliensis DSM
5305]
gi|324969767|gb|ADY60545.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
Length = 381
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L ++ L L L S GDD++ V C + L NL+L S+AG+ L G L L+
Sbjct: 94 LAKLPKLRSLLLRESNAGDDALIAVGKC--SQLENLDLRECPVSNAGLAHLVG-LEKLKA 150
Query: 147 LSLSG----TQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDL---------- 191
L LSG T +DD + ++ +P LK + + I G +QQ+ TDL
Sbjct: 151 LRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYLASTLV 210
Query: 192 -----------------------VLSLTALQNLNHLERLNL----EQTQVSDATLFPLST 224
LS +Q ++ L +L E + +S+ + LS
Sbjct: 211 GDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSK 270
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+L L+L ++D + L+ L+KLT L++ + L+++GL + K + LK L L
Sbjct: 271 LTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHL 327
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 28/262 (10%)
Query: 22 SSLECLNLSNCTIDSI----LEGNENKAPLAKISLAGTTFIN----EREAFL-YIETSLL 72
S LE L+L C + + L G E L +G T ++ E A L ++ L
Sbjct: 122 SQLENLDLRECPVSNAGLAHLVGLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLAL 181
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSS 131
FL +S L + LT ++ L L+S+++GD+ ++ ++ LR L +S ++ S
Sbjct: 182 DFLWISGDGLQQLKPLTDLR---ELYLASTLVGDEDLKALSQF-PELRKLRVSKLSQLSG 237
Query: 132 AGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
G+ ++ L LE L +S + + + IS +S + L +++ I G E
Sbjct: 238 QGIQEIS-QLSKLEELDVSEDSSLSNDDISSLSKLTKLTKLNLWRVPIS----DAGVEH- 291
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
L L L LNL+ TQ+SDA L L KEL L L + +++ L QLS L
Sbjct: 292 -------LAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSELK 344
Query: 251 KLTNLSIRDAVLTNSGLGSFKP 272
L L + + G+ +P
Sbjct: 345 SLDKLVVTRTAVNQEGVDKLQP 366
>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
Length = 363
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 128/291 (43%), Gaps = 27/291 (9%)
Query: 10 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINER---EAFL 65
++ G + + L LN+SN I G + ++++ L N R E
Sbjct: 14 ISGKGAKYISEMKQLTSLNISNNRI-----GGKGAKYISEMKQLTSLNIFNNRISDEGAK 68
Query: 66 YI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
YI E L LD+S + + F+++MK L L++S + I D+ + ++ + L +L
Sbjct: 69 YISEMKQLISLDISYNQIGAEGAKFISEMKQLTSLNISYNEISDEGAKYISEM-KQLTSL 127
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-- 180
N+S S I + L L++S QI Y+S M L ++IS+ I G
Sbjct: 128 NISYNDISEGAKPI--SEMKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISDNQISGKG 185
Query: 181 --FIQQVGAETDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 230
+I ++ T L +S L + L LN+ Q+S +S K+L
Sbjct: 186 AKYIGEMKQLTSLDISNNQISDEGAKFLSEMKQLISLNVSNNQISGKEAKFMSEMKQLTS 245
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L++ N ++D +S + +LT+L I + ++++ G + L LD+
Sbjct: 246 LNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGAKYISEMKHLTSLDI 296
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 39/267 (14%)
Query: 2 FPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 57
+L+ LN+++ G + + L LN+SN +IS G +
Sbjct: 121 MKQLTSLNISYNDISEGAKPISEMKQLTSLNVSNN----------------QISGKGAKY 164
Query: 58 INEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACV 115
I+E + L+ L++S++ +S ++ +MK L LD+S++ I D+ + ++ +
Sbjct: 165 ISEMKQ--------LTSLNISDNQISGKGAKYIGEMKQLTSLDISNNQISDEGAKFLSEM 216
Query: 116 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 175
L +LN+SN + S ++ + L L++S QI D Y+S M L +DI N
Sbjct: 217 -KQLISLNVSNNQISGKEAKFMS-EMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFN 274
Query: 176 TDIK----GFIQQVGAETDLVLSLTALQNLNHLERL---NLEQTQVSDATLFPLSTFKEL 228
I +I ++ T L +S + +++ +++L N+ Q++D +S K+L
Sbjct: 275 NLISDEGAKYISEMKHLTSLDISYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQL 334
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNL 255
L + + +S + LT+L
Sbjct: 335 TSLDMSYNRIGGEGAKYISEMKHLTSL 361
>gi|298709085|emb|CBJ31033.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 573
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 67 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 126
+E L+ + N LSR + + L LDL + +S +L L+LSN
Sbjct: 274 LERVCLARSGIGNEGLSRLSAGSPL--LRDLDLCGCVRLTESGAHTLSALQDLETLDLSN 331
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
R S V LA LP L L+L + D + +S + L+ +++++T I
Sbjct: 332 CRVYSC-VEELAQKLPGLTALNLDRCNVGDTGVRALSSLTKLERLNLADTSI-------- 382
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
TD +T L L L LNL ++DA L PL+ L+ L+L + D + QL
Sbjct: 383 --TDA--GMTHLAPLTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLDTRDVGDAGMVQL 438
Query: 247 SSLSKLTNLSIRDAVLTNSGL 267
+ L L +L + A +T+ G+
Sbjct: 439 TRLRLLESLDVFSASITDFGV 459
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 8 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 67
+ L +G L + LE L+LSNC + S +E K P G T +N
Sbjct: 308 VRLTESGAHTLSALQDLETLDLSNCRVYSCVEELAQKLP-------GLTALN-------- 352
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
LD N + L+ + LE L+L+ + I D + +A + LR+LNL
Sbjct: 353 -------LDRCNVGDTGVRALSSLTKLERLNLADTSITDAGMTHLAPL-TRLRDLNLFFC 404
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
+ AG+G LA L NL L+L + D + ++ + L+ +D+ + I F G
Sbjct: 405 HITDAGLGPLAA-LSNLVRLNLDTRDVGDAGMVQLTRLRLLESLDVFSASITDFGVAHG- 462
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQL 246
L L L L + +++D L+ LS K L L++ +N +T + +
Sbjct: 463 ----------LCRLPCLTTLEVCSGRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHV 512
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
+L++L +L++ +T S L S +L+ L + G L D
Sbjct: 513 GTLTRLRSLNLSSCNITPSSLNSLTGLVNLESLSVFGCRLEMTD 556
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 145
L + LE + L+ S IG++ + ++ LR+L+L R + +G L+ L +LE
Sbjct: 267 VLPVLPKLERVCLARSGIGNEGLSRLSAGSPLLRDLDLCGCVRLTESGAHTLSA-LQDLE 325
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
L LS ++ +P L +++ ++ +T + AL +L LE
Sbjct: 326 TLDLSNCRVYSCVEELAQKLPGLTALNLDRCNV--------GDT----GVRALSSLTKLE 373
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
RLNL T ++DA + L+ L L+L +TD L L++LS L L++ + ++
Sbjct: 374 RLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLDTRDVGDA 433
Query: 266 GLGSFKPPRSLKLLDL 281
G+ R L+ LD+
Sbjct: 434 GMVQLTRLRLLESLDV 449
>gi|255583092|ref|XP_002532313.1| protein binding protein, putative [Ricinus communis]
gi|223527982|gb|EEF30065.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 58/309 (18%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL-- 65
N+ GV+ L + L LNL C + + A L IS L T++N L
Sbjct: 265 NVTDLGVSYLKGLQKLIMLNLEGCNVTT--------ACLDSISALVALTYLNLNRCNLSD 316
Query: 66 -----YIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+ L L + ++++ C L + LE+L+L S IGD+ + + G
Sbjct: 317 DGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLMNLENLNLDSCNIGDEGLANL--TGLP 374
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L++L LS+T S G+ L+G L LE L+LS T + D + +S + SL+ +++ I
Sbjct: 375 LKSLELSDTEVGSNGLRHLSG-LTLLENLNLSFTLVTDSGLRRLSGLLSLRSLNLDARQI 433
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK------------ 226
TD L AL L L L+L ++SD+ L FK
Sbjct: 434 ----------TDA--GLAALTRLTGLIHLDLFGARISDSGTKYLQYFKNLQSLEICGGGL 481
Query: 227 ---------ELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
+L+HL++ +N++LTD +L +S L++L +L++ ++++TN GL KP
Sbjct: 482 TDDGVKNIKDLVHLTVLNLSQNSNLTDKTLELISGLTELVSLNVSNSLITNEGLHYLKPL 541
Query: 274 RSLKLLDLH 282
++L+ L L
Sbjct: 542 KNLRSLSLE 550
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
L F N+ + L + +LE LNL +C I N PL + L+ T
Sbjct: 333 LGFNNITDACLVHLKGLMNLENLNLDSCNIGDEGLANLTGLPLKSLELSDT--------- 383
Query: 65 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 124
+V ++ L LT LE+L+LS +++ D + ++ +LR+LNL
Sbjct: 384 -----------EVGSNGLRHLSGLT---LLENLNLSFTLVTDSGLRRLS-GLLSLRSLNL 428
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+ + AG+ L L L L L G +I D Y+ +L+ ++I G +
Sbjct: 429 DARQITDAGLAALT-RLTGLIHLDLFGARISDSGTKYLQYFKNLQSLEICG----GGLTD 483
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
G + +++L HL LNL Q + ++D TL +S EL+ L++ N+ +T+ L
Sbjct: 484 DGVKN--------IKDLVHLTVLNLSQNSNLTDKTLELISGLTELVSLNVSNSLITNEGL 535
Query: 244 HQLSSLSKLTNLSIRDAVLTNS 265
H L L L +LS+ +T S
Sbjct: 536 HYLKPLKNLRSLSLESCKVTAS 557
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+ NL+ L +S + + D +SY+ + L +++ ++ T + S++AL
Sbjct: 253 ITNLKELQISNSNVTDLGVSYLKGLQKLIMLNLEGCNVT---------TACLDSISALVA 303
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L + LNL + +SD S K L LSL ++TD L L L L NL++
Sbjct: 304 LTY---LNLNRCNLSDDGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLMNLENLNLDSC 360
Query: 261 VLTNSGLGSFK--PPRSLKLLDLHGG 284
+ + GL + P +SL+L D G
Sbjct: 361 NIGDEGLANLTGLPLKSLELSDTEVG 386
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NL+ L +SN+ + GV L G L L +L+L G + + +S + +L +++++ +
Sbjct: 255 NLKELQISNSNVTDLGVSYLKG-LQKLIMLNLEGCNVTTACLDSISALVALTYLNLNRCN 313
Query: 178 I--KGFIQQVGAETDLVLS----------LTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
+ G + G + VLS L L+ L +LE LNL+ + D L L+
Sbjct: 314 LSDDGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLMNLENLNLDSCNIGDEGLANLTGL 373
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L L L + + L LS L+ L NL++ ++T+
Sbjct: 374 -PLKSLELSDTEVGSNGLRHLSGLTLLENLNLSFTLVTD 411
>gi|229149630|ref|ZP_04277861.1| Internalin [Bacillus cereus m1550]
gi|228633840|gb|EEK90438.1| Internalin [Bacillus cereus m1550]
Length = 766
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VMPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 342 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 398
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 399 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 456
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S+L KL LS IRD
Sbjct: 457 ISDLS--PVSNLKKLVFLSFVANEIRDV 482
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 54/192 (28%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L L V+N+ + F +K L HL L + D M NL +L+LSN + ++
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFAD---VMPLVKMDNLESLDLSNNKITN 306
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
V L + N++ L LSG QI+D
Sbjct: 307 --VAPLT-EMKNVKSLFLSGNQIED----------------------------------- 328
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 ---VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDIKP 375
Query: 252 LTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 376 LYTLPLKDLVLT 387
>gi|430741732|ref|YP_007200861.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
gi|430013452|gb|AGA25166.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
Length = 304
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLP 142
F L L+ L + ++ D + + + LR + + ++AG+ L G HL
Sbjct: 94 FTALGMFDQLQELTMVVGVMTDTGLAQLGGL-PRLRQVYCFKPKVTNAGLAHLKGATHLV 152
Query: 143 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 202
+LE+L + +I D + +++ + +L+ +++S I G L
Sbjct: 153 SLELLRVP--EITDEGLVHLAGLTNLEKLNLSGARIAG------------------PGLP 192
Query: 203 HLERLNLEQTQV----SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
HL RL +T V +DA L L F L L L TD L +LS L LT L +
Sbjct: 193 HLARLGRLRTLVLGSTTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLE 252
Query: 259 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
LT + L +L+ LDL GG +++ AI +F + P++ +
Sbjct: 253 AGDLTEAVLIHVAGLPNLERLDL-GGAPVSQAAIEKFKRARPQVRI 297
>gi|218232900|ref|YP_002366112.1| internalin [Bacillus cereus B4264]
gi|218160857|gb|ACK60849.1| putative internalin [Bacillus cereus B4264]
Length = 760
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VMPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S+L KL LS IRD
Sbjct: 451 ISDLS--PVSNLKKLVFLSFVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 54/192 (28%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L L V+N+ + F +K L HL L + D M NL +L+LSN + ++
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFAD---VMPLVKMDNLESLDLSNNKITN 300
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
V L + N++ L LSG QI+D
Sbjct: 301 --VAPLT-EMKNVKSLFLSGNQIED----------------------------------- 322
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 ---VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDIKP 369
Query: 252 LTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 370 LYTLPLKDLVLT 381
>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+T+MK L+ LD+S + IGD+ + ++ + L +L++ R GV + + +L
Sbjct: 122 FITEMKQLKSLDISENRIGDEGAKFISEM-KQLTSLDIGYNRIGVVGVKFI-NEMKHLTS 179
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L +SG I D + +S + L +D +N I GA++ + + HL
Sbjct: 180 LDISGNGIGDEGVKSISELKQLTSLDFNNNRIG----DKGAKS--------ISEMKHLTL 227
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++ + +S K+L LS+ N + D ++ + +LT+L I + G
Sbjct: 228 LSINNNHIGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEG 287
Query: 267 LGSFKPPRSLKLLDLHGGWLLTEDAIL 293
+ + L L++ G + E A L
Sbjct: 288 VIPISEMKQLTSLEIGGNQIGDEGAKL 314
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+ +MK L LD+S + IGD+ V+ ++ + L +L+ +N R G ++ + +L +
Sbjct: 170 FINEMKHLTSLDISGNGIGDEGVKSISEL-KQLTSLDFNNNRIGDKGAKSIS-EMKHLTL 227
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
LS++ I ++S M LK + I N Q+G E + + L
Sbjct: 228 LSINNNHIGAEGARFISEMKQLKSLSIYNN-------QIGDE-----GAKFINEMKQLTS 275
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++ ++ + P+S K+L L + + D +S + +L +L+I + + G
Sbjct: 276 LDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEG 335
Query: 267 LGSFKPPRSLKLLDLHGGWLLTE 289
+ LK L + G + E
Sbjct: 336 AKFISEMKQLKSLYIGGNQIGDE 358
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 49 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 106
+I + G FINE + L+ LD+S + + ++++K L LD +++ IGD
Sbjct: 162 RIGVVGVKFINEMKH--------LTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGD 213
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ ++ + +L L+++N + G ++ + L+ LS+ QI D +++ M
Sbjct: 214 KGAKSISEM-KHLTLLSINNNHIGAEGARFIS-EMKQLKSLSIYNNQIGDEGAKFINEMK 271
Query: 167 SLKFIDISNTDI--KGFI---------------QQVGAETDLVLSLTALQNLNHLERLNL 209
L +DIS +I +G I Q+G E ++S + L LN+
Sbjct: 272 QLTSLDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLIS-----EMKQLISLNI 326
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
Q+ +S K+L L + + D + +S + +LT+L I
Sbjct: 327 YNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKFISEMKQLTSLDI 374
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 49 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL--TQMKALEHLDLSSSMIGD 106
+I G FINE + L+ LD+S + + + ++MK L L++ + IGD
Sbjct: 258 QIGDEGAKFINEMKQ--------LTSLDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGD 309
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ ++++ + L +LN+ N + G ++ + L+ L + G QI D + ++S M
Sbjct: 310 EGAKLISEM-KQLISLNIYNNQIGIEGAKFIS-EMKQLKSLYIGGNQIGDEGVKFISEMK 367
Query: 167 SLKFIDISNTDI 178
L +DI +I
Sbjct: 368 QLTSLDIGYNEI 379
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 19/185 (10%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
+ L+ L +S +I D ++S M L +DI I V+ + +
Sbjct: 125 EMKQLKSLDISENRIGDEGAKFISEMKQLTSLDIGYNRIG------------VVGVKFIN 172
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
+ HL L++ + D + +S K+L L N + D +S + LT LSI +
Sbjct: 173 EMKHLTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINN 232
Query: 260 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 319
+ G + LK L ++ + E A +F E+ S+ ++IG
Sbjct: 233 NHIGAEGARFISEMKQLKSLSIYNNQIGDEGA--KFIN-----EMKQLTSLDISGNEIGV 285
Query: 320 NGPSP 324
G P
Sbjct: 286 EGVIP 290
>gi|290984372|ref|XP_002674901.1| predicted protein [Naegleria gruberi]
gi|284088494|gb|EFC42157.1| predicted protein [Naegleria gruberi]
Length = 599
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNLE 145
+ QM+ L LD++++MIG++ +E+++ + L +L++ + S GV L HL NL
Sbjct: 190 IAQMRKLTFLDINTNMIGNEGIELISRM-EQLTDLDVMDNNIRSEGVKSLCKMKHLTNLN 248
Query: 146 ILSLSGTQIDDYAISYMSMMPSLK--FIDISNTDIKGFIQQ---VGAETDLVLSLTA--- 197
I I+D + M LK +N +KGF + E+ ++L L
Sbjct: 249 I---GNNPIEDEGAILLGEMKQLKNLITACNNIGMKGFSSLSTLLNLESLVILGLDGKST 305
Query: 198 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
++ +N L RL + + P+S L L++R ++ D L + KLT L
Sbjct: 306 DFIREMNQLTRLEFYGSNLEPKGFDPISHLSNLTFLTIRGRNIADGDLECIGQFKKLTTL 365
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDL 281
++ + N G S ++L LDL
Sbjct: 366 NVPSCNI-NQGFKSICGLKNLTFLDL 390
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+FLD+S + + +T +K+L LD++ + IG + + ++ + NL NL + +
Sbjct: 385 LTFLDLSYNKIESVESITNLKSLTQLDINGNRIGHEGAKSISQL-DNLTNLQIGHNLIQD 443
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G+ L+ + L L ++ QI ++S L +D++N I+ GA+
Sbjct: 444 EGIKYLS-TMQCLTTLGVAENQISIEGAKFISKSHQLTSLDLTNN----VIETEGAKI-- 496
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
L LN+L L + ++ D +ST ++L L + +TD +S+L +
Sbjct: 497 ------LSELNNLTGLFVYGNRIRDEGAKYISTMQQLTILDIAYNEITDEGAKAISNLDQ 550
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L+ L I + + G S + L +LD+
Sbjct: 551 LSTLYIYSNEICDEGAKSICGMKQLTILDI 580
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS--NTDIKGFIQQV 185
++ +GI + LEI S +++ ++++ M L +DIS N + KG I
Sbjct: 87 KWFCTNIGIFMKGMIRLEI---SYCRLEAEDVNFIGEMKQLTELDISLNNINCKGAI--- 140
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
+ L+ L +LN+ QT++ LS KEL L + + L
Sbjct: 141 -----------TISQLSKLTKLNVYQTKMGVEGAKELSKLKELTSLEIGDNHLKSEGAAH 189
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
++ + KLT L I ++ N G+ L LD+ + +E + CKM
Sbjct: 190 IAQMRKLTFLDINTNMIGNEGIELISRMEQLTDLDVMDNNIRSE-GVKSLCKM 241
>gi|449132603|ref|ZP_21768618.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448888282|gb|EMB18604.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 455
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
+M LE L L + + D+ +E++ + + LR ++L NT AG+ LA + L + L
Sbjct: 154 KMNTLEVLFLRRTGVTDEGLELLTGL-SKLRAIDLRNTNIGDAGMDPLA-KIKTLADVQL 211
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISN-TDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
+++ D + ++ +P LK+I+ + T I G ++ +T LERL
Sbjct: 212 EKSKVTDEGLVKLAPLP-LKYINFNYCTTINGPTMKMLGQTP------------TLERLQ 258
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
+ ++++DA++ L +L HL +R +T + +++ L +RD+ + + GL
Sbjct: 259 GDYSKINDASMAELKGLSKLTHLRIRGCDVTGEGIKHIANNKALAKFELRDSSVDDKGLE 318
Query: 269 SFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
++ +D+ L + + I Q K+
Sbjct: 319 VISQLPAVTHVDISECRLASPEGIAQLGKL 348
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 131/318 (41%), Gaps = 43/318 (13%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKI-SLAGTTFI 58
L L L TGVT L +S L ++L N I G+ PLAKI +LA
Sbjct: 158 LEVLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNI-----GDAGMDPLAKIKTLADVQLE 212
Query: 59 NER---EAFLYIETSLLSFLDVSNSSL---SRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
+ E + + L +++ + + L Q LE L S I D S+ +
Sbjct: 213 KSKVTDEGLVKLAPLPLKYINFNYCTTINGPTMKMLGQTPTLERLQGDYSKINDASMAEL 272
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
+ + L +L + + G+ +A + L L + +DD + +S +P++ +D
Sbjct: 273 KGL-SKLTHLRIRGCDVTGEGIKHIANN-KALAKFELRDSSVDDKGLEVISQLPAVTHVD 330
Query: 173 ISNTDI---KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
IS + +G Q L L L L L +T+ +DATL L
Sbjct: 331 ISECRLASPEGIAQ--------------LGKLTGLTYLGLWETKTNDATLEAFGELVNLE 376
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRSLKLLDLHGGWL 286
L+L++ S+TD SL L ++KL L++ L + L +S+ + + G+
Sbjct: 377 ELNLKSTSVTDQSLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSIGF- 435
Query: 287 LTEDAILQFCKMHPRIEV 304
D I + HP ++V
Sbjct: 436 ---DVIDTLAENHPDLQV 450
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+PN I + +G IDD + ++ + L+ + +S+T I TD +
Sbjct: 107 IPNTLIATFNGPGIDDAGMENLTSLTKLERLILSDTAI----------TDRTIETAG--K 154
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+N LE L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 155 MNTLEVLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKS 214
Query: 261 VLTNSGLGSFKP 272
+T+ GL P
Sbjct: 215 KVTDEGLVKLAP 226
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L +L LERL L T ++D T+ L L LR +TD L L+ LSKL + +
Sbjct: 128 LTSLTKLERLILSDTAITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTGLSKLRAIDL 187
Query: 258 RDAVLTNSGLGSFKPPRSL 276
R+ + ++G+ ++L
Sbjct: 188 RNTNIGDAGMDPLAKIKTL 206
>gi|407849405|gb|EKG04153.1| hypothetical protein TCSYLVIO_004793 [Trypanosoma cruzi]
Length = 835
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 114 CVGANLRNLNLSNTRFSSAGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
C +LR L+LS T SA + +L L L + S SG + S++ + SL +
Sbjct: 378 CALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVK----DASFVEGLLSLGHL 433
Query: 172 DISNTDIKGF----IQQVGAETDLVLS----LTALQ---NLNHLERLNLEQTQVSDATLF 220
D+++T IK +++ A T L L LT +Q L L LNLE T+V DA +
Sbjct: 434 DLTDTSIKDAGTQSLRKCTALTFLSLQDCRFLTDIQFVEPLKDLLNLNLEGTEVVDANII 493
Query: 221 PLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
PL +L LSLR+ LTDV L L L +L + +T+ G+ SL+ +
Sbjct: 494 PLMHCTKLEVLSLRHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGVSDVSQCISLERI 551
Query: 280 DLHGGWLLTEDAILQ 294
DL G L+T L+
Sbjct: 552 DLSGCCLITHFEFLR 566
>gi|319881515|gb|ADV75084.1| TLR2B [Amazona albifrons]
Length = 397
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 70 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 125
SLL+ + V N+ + C L+Q +++LE+LDLSS+++GD S+E AC GA +L+ LNLS
Sbjct: 97 SLLTKVTVENTKVFLVPCSLSQHLRSLEYLDLSSNLLGDQSLEHSACQGAWPSLQTLNLS 156
Query: 126 NTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQ 183
S + G HL NL +L +S + I + P +LK++++S+T I
Sbjct: 157 QNSLSDLEMTGKSLSHLRNLSLLDISQNNFGE--IPDVCEWPKNLKYLNVSSTHIPKLTT 214
Query: 184 QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ + VL ++A LQ L L+ L L + Q+ TL + L+ +S+R
Sbjct: 215 CIPPTLE-VLDVSANNLKEFGLQ-LPFLKELYLTKNQLK--TLPGAAPIPNLVAMSVRRN 270
Query: 237 SLTDVSLHQLSSLSKLTNLSIRD 259
L S + S K+ L D
Sbjct: 271 KLNSFSREEFESFKKMELLDASD 293
>gi|423654209|ref|ZP_17629508.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
gi|401296676|gb|EJS02293.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
Length = 760
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
L LSSL L L +
Sbjct: 434 L--LSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|87311782|ref|ZP_01093896.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
gi|87285456|gb|EAQ77376.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
Length = 427
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 51 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 110
L G +ER + S+ SF D LS+ +K ++ L + + + D +++
Sbjct: 48 ELGGRLTKDERGVVTVADMSVASFSDEQLEPLSK------LKHVKILKVYGADVTDKTID 101
Query: 111 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
+ + +LR+ + +NT S AG+ L+ L +L +L L T I + ++ M +P L++
Sbjct: 102 NLLQM-KDLRDFSAANTTISDAGIEKLSA-LKDLSVLQLRRTNISNKSLESMLQLPKLRY 159
Query: 171 IDISNTDIKGFIQQVGA----------ETDLV--LSLTALQNLNHLERLNLEQTQVSDAT 218
+D+ DI ++ A E +V L L L+ L+ LN+ T V+DA
Sbjct: 160 LDLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTNVTDAG 219
Query: 219 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 277
++ L L +LT + L+ L+K+ L + A + + G K + L+
Sbjct: 220 FKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQLQ 278
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 42/243 (17%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L + D++++ + + +M +E L L +++GD+ + + + + L+ LN+ T +
Sbjct: 162 LRYDDITDAGME---IVAKMPNMEVLRLEGAIVGDEGLAHLTGL-SKLKFLNVRGTNVTD 217
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--GFI------- 182
AG +A +L NLE L +GT + + Y++ + +K +++ +K GF+
Sbjct: 218 AGFKSIA-NLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQ 276
Query: 183 ---------QQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQVS 215
+ GA + ++ + L++L+ +LE+LNL T+V+
Sbjct: 277 LQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGKFKNLEKLNLWFTKVT 336
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPR 274
L + + L L +TD SL L + KL LS++D ++TN + K +
Sbjct: 337 PDGLPHIKDLTNMKTLILDYQGITDDSLENLVGMQKLQTLSLKDNDMITNESIKYLKQLK 396
Query: 275 SLK 277
LK
Sbjct: 397 GLK 399
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L L L H++ L + V+D T+ L K+L S N +++D + +LS+L L+
Sbjct: 76 LEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSV 135
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
L +R ++N L S L+ LDL + DA ++ P +EV
Sbjct: 136 LQLRRTNISNKSLESMLQLPKLRYLDLR--YDDITDAGMEIVAKMPNMEV 183
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 29/213 (13%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 129
L+ LD+S + ++ L+ + L LDL ++ I D V+ + NL NL+LS+ R
Sbjct: 168 LTDLDLSTNQITDASPLSGLTNLTDLDLDNNQITD-----VSSLSGLINLMNLDLSSNRI 222
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ L+G L N+ L L G QI D +S ++ +L ++D+S I + + T
Sbjct: 223 TNVS---LSG-LTNVVWLDLWGNQITDVTLSGLT---NLTWLDVSRNQIAD-VSSLSGLT 274
Query: 190 DL---------VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
+L + +++L L +L L+L Q++DA+ PLS L +L L N + D
Sbjct: 275 NLTKLYLGCNQITDVSSLSGLTNLTDLDLSTNQITDAS--PLSGLTNLTYLDLDNNRIND 332
Query: 241 VSLHQLSSLS--KLTNLSIRDAVLTNSGLGSFK 271
VSL L++L+ +L+N I D V + SGL + K
Sbjct: 333 VSLSDLTNLTDLELSNNQIND-VSSLSGLTNLK 364
>gi|423564273|ref|ZP_17540549.1| hypothetical protein II5_03677 [Bacillus cereus MSX-A1]
gi|401197304|gb|EJR04237.1| hypothetical protein II5_03677 [Bacillus cereus MSX-A1]
Length = 760
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIRDAVLTN 264
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|326435264|gb|EGD80834.1| TKL protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1626
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 91 MKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
+ LEHLD++ + + +++A +GA++R+LNL++T +SA + +A P+LE+L +
Sbjct: 588 LAQLEHLDMAYVRLPPARLHDVLASIGASIRHLNLTSTAVTSAMLEQVAAAWPDLEVLDI 647
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 209
S T +D ++ + P L+ +D+S T I + L+ +L A N+ L
Sbjct: 648 SNTAVD--SLLPLRHTPKLRVLDVSFTRITTLEPITTGQLPLLTTLRA-ANVTRL----- 699
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 269
T + A P + L HL++ LT +S + + S L +L N GL
Sbjct: 700 --THLGGAGALP--SLPHLQHLTISGTGLTRISDNAFAGASNLVSLEFS----FNDGLRH 751
Query: 270 FKP 272
P
Sbjct: 752 VSP 754
>gi|229154260|ref|ZP_04282380.1| hypothetical protein bcere0010_4600 [Bacillus cereus ATCC 4342]
gi|228629084|gb|EEK85791.1| hypothetical protein bcere0010_4600 [Bacillus cereus ATCC 4342]
Length = 925
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + L+ + + L ++ T+ + E + FL
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLKNIKFISDLRQLKSVSITYGELEDIGHLAELEHIEFL 292
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 TLRNNKISDLSPLSQMKKIKMLDLNSNDIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 390
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
LT L L+ L++LNLE+ +SD T PLS +L +L L + + DV
Sbjct: 391 DLTPLSKLSRLQKLNLEENFISDIT--PLSQLTDLYNLKLGSNEIRDV 436
>gi|229126744|ref|ZP_04255756.1| Internalin [Bacillus cereus BDRD-Cer4]
gi|228656684|gb|EEL12510.1| Internalin [Bacillus cereus BDRD-Cer4]
Length = 766
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 342 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 398
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 399 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 456
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S+L KL LS IRD
Sbjct: 457 ISDLS--PVSNLKKLVFLSFVANEIRDV 482
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 374 KPLYTLPLKDLVLT 387
>gi|406835554|ref|ZP_11095148.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 392
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+ LR L LS+TR ++ +A LP LE+L LS T +DD ++ +S + +LK +++S
Sbjct: 114 SKLRQLRLSSTRVTNEACEKIA-ELPALEVLILSDTVVDDVGVAALSRLSNLKSLELSRC 172
Query: 177 DI-KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
+ + Q +GA LE L + +T + D +L + K L+ L L N
Sbjct: 173 HLTRAGFQAIGA-------------FPALEYLEIRRTNLDDVSLDLVCNAKTLVSLRLSN 219
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+TD L L L + L + + GL
Sbjct: 220 NPITDQGLDALGKLPGIEVLEFNETGIHGWGL 251
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 63
RLS + K+ + +LE L LS+ +D + A L+++S
Sbjct: 120 RLSSTRVTNEACEKIAELPALEVLILSDTVVDDV-----GVAALSRLSN----------- 163
Query: 64 FLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
L L++S L+R F + ALE+L++ + + D S+++V C L +
Sbjct: 164 --------LKSLELSRCHLTRAGFQAIGAFPALEYLEIRRTNLDDVSLDLV-CNAKTLVS 214
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 161
L LSN + G+ L G LP +E+L + T I + +++
Sbjct: 215 LRLSNNPITDQGLDAL-GKLPGIEVLEFNETGIHGWGLAH 253
>gi|195119542|ref|XP_002004290.1| GI19692 [Drosophila mojavensis]
gi|193909358|gb|EDW08225.1| GI19692 [Drosophila mojavensis]
Length = 819
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I+ L + N+ LS + L+ + +LE LDL+++ I ++ VG
Sbjct: 190 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLNSLERLDLANNKI--KALGTADFVGLG 247
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFIDISN 175
NL L LSN + SS +G L LE+L L G ++ DYA + +S SL+ +D++
Sbjct: 248 NLVYLELSNNQISSISQRTFSG-LRKLEVLKLGGNRLGDYAQSLKALSQCLSLRQLDLTA 306
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 307 NNLNG-----------PLSEQTLPGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 355
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 356 NQIDVLQDHAFFGLGSLDSLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 414
>gi|423361390|ref|ZP_17338892.1| hypothetical protein IC1_03369 [Bacillus cereus VD022]
gi|401079838|gb|EJP88132.1| hypothetical protein IC1_03369 [Bacillus cereus VD022]
Length = 760
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIRDAVLTN 264
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|218896361|ref|YP_002444772.1| internalin [Bacillus cereus G9842]
gi|218544923|gb|ACK97317.1| putative internalin [Bacillus cereus G9842]
Length = 760
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIRDAVLTN 264
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|83592173|ref|YP_425925.1| hypothetical protein Rru_A0837 [Rhodospirillum rubrum ATCC 11170]
gi|386348881|ref|YP_006047129.1| hypothetical protein F11_04310 [Rhodospirillum rubrum F11]
gi|83575087|gb|ABC21638.1| Leucine-rich repeat [Rhodospirillum rubrum ATCC 11170]
gi|346717317|gb|AEO47332.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum F11]
Length = 1085
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 46/280 (16%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLN---LSNCTIDSI--LEGNENKAPLAKISLAGTTFIN 59
L +NL+ T +T L ++ LE L LS T+ + L G EN L + L GT I+
Sbjct: 140 LQSINLSATQITDLAPLAGLENLQNLTLSYTTVTDLAPLAGLEN---LQHLILLGTRVID 196
Query: 60 EREAFLYIETSLLSF--LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG- 116
L L S LD+S + ++ L +K+L+ LDL + + D + VG
Sbjct: 197 -----LTPLAGLKSLQSLDLSGTRVTNIAPLVGLKSLQSLDLRRTRVTD----IAPLVGL 247
Query: 117 ---ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
+L++LNLS T + + LAG L NL+ L+LS T + D A ++ + +L+ ID+
Sbjct: 248 KSLKSLQSLNLSRTPVTD--LAPLAG-LENLQNLTLSYTTVTDLAP--LAGLENLQNIDL 302
Query: 174 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
T+ V+ L L L +L+ ++L T+V D L PL+ + L +L+L
Sbjct: 303 GGTE--------------VIDLAPLAGLENLQNIDLGGTEVID--LAPLAGLENLQNLTL 346
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 273
++TD L L+ L L ++ +T+ G F P
Sbjct: 347 SYTTVTD--LAPLAGLENLQSIDCSGCRITSVPDGLFDSP 384
>gi|30019482|ref|NP_831113.1| internalin [Bacillus cereus ATCC 14579]
gi|29895026|gb|AAP08314.1| Internalin [Bacillus cereus ATCC 14579]
Length = 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S+L KL LS IRD
Sbjct: 451 ISDLS--PVSNLKKLVFLSFVANEIRDV 476
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L L ++D VLT
Sbjct: 368 KPLYTLPLKDLVLT 381
>gi|168701995|ref|ZP_02734272.1| hypothetical protein GobsU_20883 [Gemmata obscuriglobus UQM 2246]
Length = 684
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
+L + L+ L L+ + + D + + +L L+LS+T+ ++AG+ LAG L L
Sbjct: 323 LGYLKNLARLQFLSLTGTDVTDAGLARIRER-KSLTTLHLSSTKVTNAGLVHLAG-LAGL 380
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
+ L GT + D + ++ + LK + +S T + G L + L
Sbjct: 381 SHIHLDGTGVSDAGLVHLKGLTDLKTLGLSRTRVLGP------------GLAHTHSWKRL 428
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ L L T V+D LS L HL LTD + + L+ L +L++ D + +
Sbjct: 429 DALYLTNTGVTDEAFAHLSPHHTLRHLGADGTGLTDAGMAHVRHLTGLISLNLSDTAVGD 488
Query: 265 SG---LGSFKPPRSLKL 278
+G LGS P L +
Sbjct: 489 AGLMQLGSNAGPTHLTV 505
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 50 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 109
++ AG I ER++ + LS V+N+ L L + L H+ L + + D +
Sbjct: 342 VTDAGLARIRERKSLTTLH---LSSTKVTNAGL---VHLAGLAGLSHIHLDGTGVSDAGL 395
Query: 110 EMVACVGANLRNLNLSNTRFSSAGVGILAGH-LPNLEILSLSGTQIDDYAISYMSMMPSL 168
+ + +L+ L LS TR G G+ H L+ L L+ T + D A +++S +L
Sbjct: 396 VHLKGL-TDLKTLGLSRTRV--LGPGLAHTHSWKRLDALYLTNTGVTDEAFAHLSPHHTL 452
Query: 169 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
+ + T + TD + +++L L LNL T V DA L L +
Sbjct: 453 RHLGADGTGL----------TDA--GMAHVRHLTGLISLNLSDTAVGDAGLMQLGSNAGP 500
Query: 229 IHLSLRNASLTDVSLH 244
HL++RN +T LH
Sbjct: 501 THLTVRNTKVTLRGLH 516
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 139/322 (43%), Gaps = 46/322 (14%)
Query: 5 LSFLNLAWTGVT--KLPNISS---LECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFI 58
L+ LNLA++GVT L ++++ L L + T+ D+ L L I L+GT
Sbjct: 89 LAHLNLAYSGVTDAGLADLNAFPLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVT 148
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
A L L L + + + C+L + + L LS + + D + + + A
Sbjct: 149 GPGLAHLKGLKGLTLLLSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKA- 207
Query: 119 LRNLNLSNTRFSSAGVGIL------------AGHLPNLEILSLSGTQI------------ 154
L L++ TR + A + L AG P L++ L+ +
Sbjct: 208 LGTLDVRKTRATPASLAELHKSVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQ 267
Query: 155 --DDYAISYMSMMP-SLKFIDISNTDIK----GFIQQVGAETDLVL--------SLTALQ 199
D A + + P +L +++S+ +K G + T+LVL +L L+
Sbjct: 268 PRDIRAAADLPQGPLALARVNLSDRSVKDDDLGRLAGCTGLTELVLHETRVTDAALGYLK 327
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
NL L+ L+L T V+DA L + K L L L + +T+ L L+ L+ L+++ +
Sbjct: 328 NLARLQFLSLTGTDVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDG 387
Query: 260 AVLTNSGLGSFKPPRSLKLLDL 281
++++GL K LK L L
Sbjct: 388 TGVSDAGLVHLKGLTDLKTLGL 409
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L L++ L R+ L T+V+DA L L L HL+L + +TD L L++ LT+
Sbjct: 56 LARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAFPLLTS 115
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L ++ ++++GL + +L +DL G
Sbjct: 116 LWVQGTTVSDAGLAVARELPALTHIDLSG 144
>gi|392969291|ref|ZP_10334707.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrisoma limi
BUZ 3]
gi|387843653|emb|CCH56761.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrisoma limi
BUZ 3]
Length = 463
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
A TD L+ A L +L++L+LEQT+V+DA L L L +L+L ++TD L +L
Sbjct: 345 AVTDATLAQVA--KLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAGLKEL 402
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
+ L L + + +T + L K +SL ++ GG ++E A+ +F K
Sbjct: 403 AELKSLKTVYLWQTNVTETALAELK--KSLPNVEFVGG--ISEQAVAEFTK 449
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L L +T V+DATL ++ K L L L +TD L QL L L L++ +T++G
Sbjct: 339 LKLGETAVTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAG 398
Query: 267 LGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIE 303
L +SLK + L W +TE A+ + K P +E
Sbjct: 399 LKELAELKSLKTVYL---WQTNVTETALAELKKSLPNVE 434
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 156
L L + + D ++ VA + NL+ L+L T+ + AG+ L G LPNLE L+L GT I D
Sbjct: 339 LKLGETAVTDATLAQVAKL-KNLQKLHLEQTKVTDAGLKQLKG-LPNLEYLNLYGTAITD 396
Query: 157 YAISYMSMMPSLKFIDISNTDI 178
+ ++ + SLK + + T++
Sbjct: 397 AGLKELAELKSLKTVYLWQTNV 418
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
LVL L+ Q+ + +N + + A L P ++++ L L ++TD +L Q++ L
Sbjct: 300 LVLPLSKEQHQLEVSAVNAKTFSDAQAALLP-KLSQQIVWLKLGETAVTDATLAQVAKLK 358
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L L + +T++GL K +L+ L+L+G
Sbjct: 359 NLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYG 391
>gi|290994540|ref|XP_002679890.1| predicted protein [Naegleria gruberi]
gi|284093508|gb|EFC47146.1| predicted protein [Naegleria gruberi]
Length = 293
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F++++K L LD+S + IG + ++++ + L +LN+ G +++ + L
Sbjct: 21 FISEIKQLTSLDISDNQIGVEGAKLISEM-KQLTSLNIFKNGIGVEGAKLIS-EMKQLTS 78
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L +SG I D + +S M L +DIS +I G E ++S + L
Sbjct: 79 LDISGNLIYDEGVKSISEMKQLTSLDISKNEI-------GVEGAKLIS-----GMKQLTS 126
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
LN+ + ++SD +S K+L L++ + + D LS + +LT+L I + G
Sbjct: 127 LNISKNEISDEGAKLISEMKQLTSLTIYKSGIDDKGAKYLSEIKQLTSLDISSNPMGVEG 186
Query: 267 LGSFKPPRSLKLLDLHGGWLLTEDA 291
+ L LD+ + E A
Sbjct: 187 AKFISEMKQLTSLDISNNLIYDEGA 211
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++MK L LD+S + IG + ++++ + L +LN+S S G +++ + L L
Sbjct: 94 ISEMKQLTSLDISKNEIGVEGAKLISGM-KQLTSLNISKNEISDEGAKLIS-EMKQLTSL 151
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAETDLVLS--------L 195
++ + IDD Y+S + L +DIS+ ++G FI ++ T L +S
Sbjct: 152 TIYKSGIDDKGAKYLSEIKQLTSLDISSNPMGVEGAKFISEMKQLTSLDISNNLIYDEGA 211
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ + L LN+ + D +S K+L L + + D +S + +LT+L
Sbjct: 212 EFISGMKQLTSLNISNNIILDEGAKLISEMKQLTSLDICYNEIGDEGAKFISGMKQLTSL 271
Query: 256 SI 257
+
Sbjct: 272 YV 273
>gi|149175664|ref|ZP_01854283.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
gi|148845383|gb|EDL59727.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
Length = 660
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 18 LPNISSLECLNLSNCTIDSILEGNENKAPLA------KISLAGTTFINEREAFLYIETSL 71
L LE L L NC +D ++ A L ++ L+G + +N+ F +
Sbjct: 306 LSTFRKLEKLALRNCGLDE-----DDVATLGSLTQLRELDLSGNSSLNDVALFHLRNLNQ 360
Query: 72 LSFLDVSNSSLSRFC-----FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS- 125
L L V+ S +R +L Q + L+ LDL M+ D + + V ++L LNL
Sbjct: 361 LEELKVA-SYYNRITEKGLQYLRQPRKLKTLDLIGCMLKADGLAAIGDV-SSLETLNLKV 418
Query: 126 -------------------------NTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAI 159
R G G+ + LP LE L L T++ D I
Sbjct: 419 YCPERVDAHFFDPLRHLKSLRELTLECRQLKGGEGLSSLSQLPELEALHLLQTKLQDEDI 478
Query: 160 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 219
+++ SLK + +++ ++ TD +S +L +L LE LNL++ ++ + L
Sbjct: 479 RWIANCNSLKALTLNSYEV----------TDQGVS--SLGSLKQLESLNLDRCRLDGSGL 526
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L L +SL + +TD + LSSLS+L L++ + ++++ L S K + L L
Sbjct: 527 VSLQQLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENGRVSSATLESLKDLKKLSEL 586
Query: 280 DL 281
+L
Sbjct: 587 NL 588
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ +L+ L L+S + D V + + L +LNL R +G+ L L L
Sbjct: 480 WIANCNSLKALTLNSYEVTDQGVSSLGSL-KQLESLNLDRCRLDGSGLVSLQ-QLHRLTD 537
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
+SL+ T + D I ++S + LK + + N + +L +L++L L
Sbjct: 538 VSLNHTGVTDAVIPFLSSLSQLKRLTLENGRVSS------------ATLESLKDLKKLSE 585
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
LNL VSD L+ L L+L ++++ L L + L LS+R +T G
Sbjct: 586 LNLTNCPVSDEICELLTQMSALRTLNLNKTKVSNIGLEGLQKATGLETLSLRRTKVTRQG 645
Query: 267 LGSFK 271
+ +
Sbjct: 646 VQQLR 650
>gi|357129987|ref|XP_003566640.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Brachypodium distachyon]
Length = 769
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 72 LSFLDVSNSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 126
LSFLD+S +++S C LT++ +L DLS +++ S+ NL+ L LS+
Sbjct: 111 LSFLDLSRNTISGSIPPSICNLTKLTSL---DLSYNLLSQGSMTCTVGTLGNLKKLYLSH 167
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
++ + +L +LE L LS I + + SL+F+D+SN I G I +G
Sbjct: 168 NSLTTGLIPSDLVNLASLESLDLSNNHITGSISRSIGNLTSLEFLDLSNNQIMGSIGSIG 227
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
NL L L+L Q+ + L S L L+L + L + +L
Sbjct: 228 -------------NLTSLRYLDLSNNQIHCSILLTFSKLTSLETLALESNQLNGILPPEL 274
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKP 272
SL L++L++ +N +G+ P
Sbjct: 275 GSLVHLSHLNLS----SNQFVGTIPP 296
>gi|423404057|ref|ZP_17381230.1| hypothetical protein ICW_04455 [Bacillus cereus BAG2X1-2]
gi|423475313|ref|ZP_17452028.1| hypothetical protein IEO_00771 [Bacillus cereus BAG6X1-1]
gi|401647264|gb|EJS64873.1| hypothetical protein ICW_04455 [Bacillus cereus BAG2X1-2]
gi|402436415|gb|EJV68446.1| hypothetical protein IEO_00771 [Bacillus cereus BAG6X1-1]
Length = 752
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLASLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLASLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|434374368|ref|YP_006609012.1| internalin [Bacillus thuringiensis HD-789]
gi|401872925|gb|AFQ25092.1| internalin [Bacillus thuringiensis HD-789]
Length = 760
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IRPLYSLP-LKDLVLTRNNVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIRDAVLTN 264
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 RPLYSLPLKDLVLTRNNV 385
>gi|357150116|ref|XP_003575347.1| PREDICTED: F-box/LRR-repeat protein 14-like [Brachypodium
distachyon]
Length = 582
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 138/300 (46%), Gaps = 51/300 (17%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETS-- 70
GV+ L +S L LNL +C + + A L IS LA +N +Y E
Sbjct: 275 GVSYLRGLSKLIRLNLESCPVTA--------ACLVDISGLASLMLLNLNRCGIYDEGCES 326
Query: 71 -----LLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
L L++ + ++ C L ++ LE L+L S +GD + + L++L
Sbjct: 327 FKDLKKLKVLNLGFNYITDACLVHLKELINLEFLNLDSCKVGD-AGLLHLKGLVLLKSLE 385
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
LS+T S G+ L+G L L+ + LS T + D + +S + SLK +++ + I
Sbjct: 386 LSDTEVGSNGLRHLSG-LRTLQRIDLSFTLVTDTGMKKISALSSLKSVNLDSR----LIT 440
Query: 184 QVGAETDLVLSLTALQNLNHLERL----------------NLEQTQVSDATL--FPLSTF 225
VG + +LT L L HL+ NLE + ++ +
Sbjct: 441 DVG-----LAALTGLTGLTHLDLFGARITDNGASCFRYFKNLESLEACGGSITDVGVKNI 495
Query: 226 KELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
KEL L+L +NA+LTD +L +S L+ L +L++ ++ ++N+GL ++L+ L L
Sbjct: 496 KELKALTLLNLSQNANLTDKTLELISGLTALVSLNVSNSRVSNAGLRHLNALQNLRSLTL 555
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 23/277 (8%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + LE +N+ C DS ++ + L ++ L+ + ++L + L
Sbjct: 226 GLVHLKGLRKLESINMRYCNNITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLRGLSKL 285
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
+ L++ + ++ C ++ + +L L+L+ I D+ E +L+ L + N F
Sbjct: 286 IR-LNLESCPVTAACLVDISGLASLMLLNLNRCGIYDEGCESFK----DLKKLKVLNLGF 340
Query: 130 SSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
+ L L NLE L+L ++ D + ++ + LK +++S+T +VG+
Sbjct: 341 NYITDACLVHLKELINLEFLNLDSCKVGDAGLLHLKGLVLLKSLELSDT-------EVGS 393
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L L L L+R++L T V+D + +S L ++L + +TDV L L+
Sbjct: 394 N-----GLRHLSGLRTLQRIDLSFTLVTDTGMKKISALSSLKSVNLDSRLITDVGLAALT 448
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
L+ LT+L + A +T++G F+ ++L+ L+ GG
Sbjct: 449 GLTGLTHLDLFGARITDNGASCFRYFKNLESLEACGG 485
>gi|255017603|ref|ZP_05289729.1| hypothetical protein LmonF_07220 [Listeria monocytogenes FSL
F2-515]
Length = 419
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 150 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 207
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 208 SDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 265
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++A +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 266 FNAQTNLIANIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 325
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 326 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNVYIDD-ISGL 376
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 377 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 404
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 61 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 118
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 119 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 172
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 173 PSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 227
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 228 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLIAN-----IGTMDNL 282
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 283 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 341
>gi|430746592|ref|YP_007205721.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
gi|430018312|gb|AGA30026.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
Length = 830
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 25/183 (13%)
Query: 95 EHLDL---SSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLS 150
E DL S I D +E +A + NL L++ T R G+ LA LP L L+LS
Sbjct: 621 ERKDLRIDSEEGIDDAGLEHLARL-VNLEGLSIHQTARIRGPGLAHLA-KLPKLTKLNLS 678
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
+ + D A++ ++ + LK + + +TD++ + AL+ + L L+L+
Sbjct: 679 -SGLSDKAVARLAPLKELKRLSLDHTDLRDS------------GMAALKGMTTLTELSLD 725
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI------RDAVLTN 264
+T+V+DA L L ++ LSL N S+ L L +S+L +LS + + LT+
Sbjct: 726 ETKVTDAGLSALKGMVQMERLSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTD 785
Query: 265 SGL 267
+GL
Sbjct: 786 AGL 788
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 140 HLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 198
L NLE LS+ T +I +++++ +P L +++S+ G + ++ L
Sbjct: 643 RLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSS----GLSDK---------AVARL 689
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L L+RL+L+ T + D+ + L L LSL +TD L L + ++ LS+
Sbjct: 690 APLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLSLG 749
Query: 259 DAVLTNSGLGSFKPPRSLKLL 279
+ + GL + K LK L
Sbjct: 750 NVSVRGPGLANLKGMSRLKSL 770
>gi|5739323|gb|AAD50430.1|AF166121_1 Cf2/Cf5 disease resistance protein homolog [Hordeum vulgare subsp.
vulgare]
Length = 893
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 40/253 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILA---GHLP 142
L ++ L++L+L S+ + + +G+ NLR+L+LS FS G+L G+L
Sbjct: 102 LLSLEHLQYLNLKSTSLCGHGGRIPEFLGSLNNLRHLDLSYMSFS----GVLPPQLGNLS 157
Query: 143 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------IQQVGAETDLVLSLT 196
LE L LS ++D IS++S +P L ++DIS T++ + + + DL LS
Sbjct: 158 KLEYLDLSNMEMDVIDISWLSRLPRLMYLDISYTNLSSIAAWPPVVNMIPSLKDLRLSYC 217
Query: 197 AL----QNLNHLERLNLEQTQVS-DATLFPLSTFKELIHLSLRNASLTDVSLHQ--LSSL 249
+L Q+L HL NL+ +S + P+++ S+ L+D SLH ++L
Sbjct: 218 SLSSTNQSLTHLNLTNLQHLDLSRNYFAHPIASSWFWNVTSIEYLDLSDTSLHGPFPNAL 277
Query: 250 SKLTNLSIRDAVLTNSGLGSFKP-PRSLK-LLDLHGGWL---LTEDAILQFCKMHPRIEV 304
K+T L L+ G+G+ LK L DL WL L+ + +F K PR
Sbjct: 278 GKMTFLR----QLSFFGIGNTATMTVDLKNLCDLEIIWLDGSLSSGNVTEFLKKLPR--- 330
Query: 305 WHELSVICPSDQI 317
CPS+++
Sbjct: 331 ------RCPSNRL 337
>gi|330842680|ref|XP_003293301.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
gi|325076385|gb|EGC30175.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
Length = 684
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 48/217 (22%)
Query: 1 MFPRLSFLNLAWTGVTK--LPNI----SSLECLNLSNCTIDSILEGNENKAPL------- 47
+F +L+ LNL+ T +T + NI ++++ L LSNC + NK+
Sbjct: 410 LFSKLTLLNLSETQITDVAISNIHQILTNIQYLYLSNC------QKLTNKSLFFLTYFSK 463
Query: 48 --------AKISLAGTTFINEREAFLYIE------------TSLLSFLDVSNSSLSRFCF 87
+ISL G + LY+E L S + L+ + +
Sbjct: 464 MRLLSITGTQISLNGFVHLKRLPNLLYLELPNRYCLNDQTIVYLNSLTKLKKLDLTDYTY 523
Query: 88 LT------QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 141
+T +K LE L L+++ +GD SV + + + L L+L T +SAGV L
Sbjct: 524 ITSIEPLDNLKYLEELLLANTRVGDSSVPAIKKMKS-LEVLSLDRTDITSAGVAGLVD-- 580
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
NL+ LSL T+IDD +I+Y+S + SL+ ++IS+ +I
Sbjct: 581 LNLKSLSLMKTKIDDDSINYLSEIKSLRQLNISHNNI 617
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 118 NLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
NLR L+L + R + G L L NLE L L T I D ++++ + +LK +D+S
Sbjct: 340 NLRVLDLRHNRNLTDVGCKNLKN-LVNLEELYLGSTSISDLGVAFLKQLVNLKTLDVSRC 398
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL-STFKELIHLSLRN 235
I TD + +L + L LNL +TQ++D + + + +L L N
Sbjct: 399 KI----------TDNAMVTISL--FSKLTLLNLSETQITDVAISNIHQILTNIQYLYLSN 446
Query: 236 A-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
LT+ SL L+ SK+ LSI ++ +G K +L L+L + L + I+
Sbjct: 447 CQKLTNKSLFFLTYFSKMRLLSITGTQISLNGFVHLKRLPNLLYLELPNRYCLNDQTIV 505
>gi|75759331|ref|ZP_00739428.1| Internalin protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228900010|ref|ZP_04064246.1| Internalin [Bacillus thuringiensis IBL 4222]
gi|74493163|gb|EAO56282.1| Internalin protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228859624|gb|EEN04048.1| Internalin [Bacillus thuringiensis IBL 4222]
Length = 766
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IRPLYSLP-LKDLVLTRNNVK--- 392
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIRDAVLTN 264
LSSL L L + +T+
Sbjct: 440 --PLSSLVNLQKLDLEANYITD 459
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 374 RPLYSLPLKDLVLTRNNV 391
>gi|290979617|ref|XP_002672530.1| predicted protein [Naegleria gruberi]
gi|284086107|gb|EFC39786.1| predicted protein [Naegleria gruberi]
Length = 401
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 58 INEREAFLYIETSLLSFL-DVSNSSLSRFCF-------LTQMKALEHLDLSSSMIGDDSV 109
+N R + + L + + D+S ++S F + Q+K L +LD+S ++IGD+ V
Sbjct: 90 VNRRNRIIAFDCQLFNLMKDISTLNVSENTFENGHCKYIGQLKHLTNLDISINLIGDEGV 149
Query: 110 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 169
+ + L NLN+SN G + G + L L+++ I + ++ + L+
Sbjct: 150 GYLRKL-KQLTNLNISNNMIGEKGAQYI-GKMKQLTCLNINSNHIGSEGVKFLKELKELR 207
Query: 170 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+D+ + +I +VGA+ L+ ++ L HL+ +E ++ + L KEL
Sbjct: 208 TLDM----VYCYIGEVGAKY-----LSEMKQLTHLD---VECNNINGGAKY-LGELKELT 254
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+L+ + L D + LS L LT+L++ + ++ G
Sbjct: 255 YLNAKYNILGD-DVRYLSRLELLTDLNVANNGISAKG 290
>gi|423414880|ref|ZP_17392000.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|423429338|ref|ZP_17406342.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
gi|401097800|gb|EJQ05822.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|401121644|gb|EJQ29433.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
Length = 760
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|195029419|ref|XP_001987570.1| GH21992 [Drosophila grimshawi]
gi|193903570|gb|EDW02437.1| GH21992 [Drosophila grimshawi]
Length = 815
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 117
+ AFL I+ L + N+ LS + L+ + +LE LDL+++ I + + VA
Sbjct: 191 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLSSLERLDLANNKIKALGTSDFVAL--N 248
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFIDISN 175
NL L LSN + SS G L LE+L L G ++ DYA + +S+ SL+ +D++
Sbjct: 249 NLVYLELSNNQISSISQRTF-GSLRKLEVLKLGGNRLGDYAQGLKALSLCLSLRQLDLTA 307
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L L +LE LNL + + L+ F L+ LSLR+
Sbjct: 308 NNLNG-----------PLSEQTLPGLRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 356
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 357 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 415
>gi|228907061|ref|ZP_04070925.1| Internalin [Bacillus thuringiensis IBL 200]
gi|228852565|gb|EEM97355.1| Internalin [Bacillus thuringiensis IBL 200]
Length = 766
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-KQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 392
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMKQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 374 KPLYSLPLKDLVLTRNNV 391
>gi|229172068|ref|ZP_04299633.1| Internalin [Bacillus cereus MM3]
gi|228611411|gb|EEK68668.1| Internalin [Bacillus cereus MM3]
Length = 758
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
+ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVNMDNLASLDLSNNKITNVAPLVEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 440 PLSNLVNLQKL 450
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 56/193 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ ++ F +K L HL L G++ ++ V NL +L+LSN + +
Sbjct: 250 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEFSDVTPLVNMDNLASLDLSNNKIT 305
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ + + N++ L LSG QI+D
Sbjct: 306 NVAPLV---EMKNVKSLYLSGNQIED---------------------------------- 328
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 ----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDIK 374
Query: 251 KLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 375 PLYSLPLKDLVLT 387
>gi|198458315|ref|XP_001360988.2| GA10784 [Drosophila pseudoobscura pseudoobscura]
gi|198136299|gb|EAL25564.2| GA10784 [Drosophila pseudoobscura pseudoobscura]
Length = 806
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 183 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 240
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 241 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 299
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 300 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 348
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 349 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 407
>gi|423434920|ref|ZP_17411901.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
gi|401125158|gb|EJQ32918.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
Length = 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|206967881|ref|ZP_03228837.1| putative internalin [Bacillus cereus AH1134]
gi|206736801|gb|EDZ53948.1| putative internalin [Bacillus cereus AH1134]
Length = 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|290996041|ref|XP_002680591.1| predicted protein [Naegleria gruberi]
gi|284094212|gb|EFC47847.1| predicted protein [Naegleria gruberi]
Length = 281
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--------- 138
L+++K L+ L + S IGD+ V ++ + L L++ N S G L+
Sbjct: 20 LSELKQLKKLHIYDSYIGDEGVRFISEL-KQLTTLDIRNNGISEYGAKYLSELKQLTFLI 78
Query: 139 --------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KG 180
L L IL + IDD Y+S + L +++I + I
Sbjct: 79 IDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRIGDEGSK 138
Query: 181 FIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+I ++ TDL ++ + N L HL LN+ Q+ D L K+L+ L
Sbjct: 139 YIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCELKQLMDLD 198
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+ + D + LS L +LT+L I + + G+ + + L ++ ++ E
Sbjct: 199 ISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDE 255
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 68 ETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
E L+FL D +N +++++K L L + + I D+ + ++ + L LN+
Sbjct: 70 ELKQLTFLIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSEL-KQLTYLNIQ 128
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
+ R G + G L L L ++ QI + Y+S + L ++ISN Q+
Sbjct: 129 DNRIGDEGSKYI-GELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNN-------QI 180
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
G E L L L L++ + D + LS K+L HL + + D +
Sbjct: 181 GDE-----GAKYLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKY 235
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 277
+S L ++ L I + + + G LK
Sbjct: 236 ISELKEIMYLYINNNYIGDEGTKYLSEMNQLK 267
>gi|224124626|ref|XP_002330070.1| predicted protein [Populus trichocarpa]
gi|222871495|gb|EEF08626.1| predicted protein [Populus trichocarpa]
Length = 1126
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L++L+LS+ + + +G+ +L+ L LE L LSG Q +D S ++ SLK +D+S ++
Sbjct: 138 LKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNEL 197
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
G +V + L LE L+L Q +D+ ++ F L L L +
Sbjct: 198 TGSGLKVLSSR-----------LQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNEV 246
Query: 239 TDVSLHQLSS-LSKLTNLSIRD 259
T L LSS L KL NL + D
Sbjct: 247 TGSGLKVLSSKLKKLENLDLSD 268
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 63 AFLYIET--SLLSFLDVSNSSLSRF---CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 117
AF + T S L LD+S++ L+ ++++ LE+L LS + D + +
Sbjct: 127 AFFHASTGFSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGF-S 185
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+L++L+LS + +G+ +L+ L LE L LSG Q +D S ++ SLK +D+S +
Sbjct: 186 SLKSLDLSYNELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNE 245
Query: 178 IKGFIQQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQVSDATL 219
+ G +V L L L+NL+ L+ LNL Q Q++ ++
Sbjct: 246 VTGSGLKV-----LSSKLKKLENLDLSDNQCNDSIFSSLSGFSSLKYLNLSQNQLTGSST 300
Query: 220 ------FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS-GLGSFKP 272
+S + L L L + L + L LS S L +L + D + T S GL +
Sbjct: 301 GINSFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSDNMFTGSTGLNGLRN 360
Query: 273 PRSLKL 278
+L L
Sbjct: 361 LETLYL 366
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS+ +V+ S L +++K LE+LDLS + +DS+ ++L+ LNLS + +
Sbjct: 241 LSYNEVTGSGLKVLS--SKLKKLENLDLSDNQC-NDSIFSSLSGFSSLKYLNLSQNQLTG 297
Query: 132 AGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
+ GI L L NLE L L ++++ +S +S +LK +D+S+ G
Sbjct: 298 SSTGINSFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSDNMFTG------ 351
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL--H 244
T L L +LE L L T ++ L + + L L +AS ++ +
Sbjct: 352 --------STGLNGLRNLETLYLGNTDFKESIL--IESLGALPSLKTLDASYSNFTHFGK 401
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L + S L + + D+ L S L + P +LK+L L G
Sbjct: 402 GLCNSSSLEEVFLDDSSLPASFLRNIGPLSTLKVLSLAG 440
>gi|116109774|gb|ABJ74266.1| CG11136-like protein [Drosophila pseudoobscura]
Length = 472
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 138 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 195
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 196 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 254
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 255 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 303
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 304 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 362
>gi|116109776|gb|ABJ74267.1| CG11136-like protein [Drosophila miranda]
gi|116109778|gb|ABJ74268.1| CG11136-like protein [Drosophila miranda]
gi|116109780|gb|ABJ74269.1| CG11136-like protein [Drosophila miranda]
gi|116109782|gb|ABJ74270.1| CG11136-like protein [Drosophila miranda]
gi|116109784|gb|ABJ74271.1| CG11136-like protein [Drosophila miranda]
gi|116109786|gb|ABJ74272.1| CG11136-like protein [Drosophila miranda]
gi|116109788|gb|ABJ74273.1| CG11136-like protein [Drosophila miranda]
gi|116109790|gb|ABJ74274.1| CG11136-like protein [Drosophila miranda]
gi|116109792|gb|ABJ74275.1| CG11136-like protein [Drosophila miranda]
gi|116109794|gb|ABJ74276.1| CG11136-like protein [Drosophila miranda]
gi|116109796|gb|ABJ74277.1| CG11136-like protein [Drosophila miranda]
gi|116109798|gb|ABJ74278.1| CG11136-like protein [Drosophila miranda]
gi|116109800|gb|ABJ74279.1| CG11136-like protein [Drosophila miranda]
gi|116109802|gb|ABJ74280.1| CG11136-like protein [Drosophila miranda]
gi|116109804|gb|ABJ74281.1| CG11136-like protein [Drosophila miranda]
gi|116109806|gb|ABJ74282.1| CG11136-like protein [Drosophila miranda]
gi|116109808|gb|ABJ74283.1| CG11136-like protein [Drosophila miranda]
gi|116109810|gb|ABJ74284.1| CG11136-like protein [Drosophila miranda]
Length = 473
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 139 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 196
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 197 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 255
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 256 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 304
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 305 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 363
>gi|229068980|ref|ZP_04202273.1| Internalin [Bacillus cereus F65185]
gi|229078614|ref|ZP_04211171.1| Internalin [Bacillus cereus Rock4-2]
gi|228704684|gb|EEL57113.1| Internalin [Bacillus cereus Rock4-2]
gi|228714092|gb|EEL65974.1| Internalin [Bacillus cereus F65185]
Length = 766
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 49 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 106
+I G FI+E E L+ LD+ + + +++MK L L + S+ IGD
Sbjct: 374 QIGDEGVKFISEMEQ--------LTSLDIGGNQIGVGGAKSISEMKQLTFLQIFSNRIGD 425
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ V+ ++ + L +LN+S R G ++ + L +L +S +I D + ++S M
Sbjct: 426 EGVKFISEM-KQLTSLNISGNRIGDEGAKSIS-EMKQLTLLYISSNEIGDEGVKFISEMK 483
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L + I + ++G E + ++ + L LN+ ++ D + +S K
Sbjct: 484 QLTLLQI-------YSNRIGDE-----GVKSISEMKQLTSLNISGNRIGDEGVKSISEMK 531
Query: 227 ELIHLSLRNASLTDVSLHQLSSLS 250
+L L++ N + D + L+SL+
Sbjct: 532 QLTSLNISNNRIGDEGVKLLTSLN 555
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 41/303 (13%)
Query: 4 RLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK--------- 49
+L+ LN++ G + + L L++SN ID +EG ++ + + +
Sbjct: 244 QLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLID--IEGAKSISEMKQLTSLEIYYN 301
Query: 50 -ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 106
I G FI++ E L+ LD+S + + +++MK L L + S+ IGD
Sbjct: 302 EIGDEGVKFISKMEQ--------LTSLDISGNQIGVGGAKSISEMKQLTFLQIFSNRIGD 353
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ ++ + L +LN+ + GV ++ + L L + G QI +S M
Sbjct: 354 EGANSISEM-KQLTSLNIYYNQIGDEGVKFIS-EMEQLTSLDIGGNQIGVGGAKSISEMK 411
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L F+ I F ++G E + + + L LN+ ++ D +S K
Sbjct: 412 QLTFLQI-------FSNRIGDE-----GVKFISEMKQLTSLNISGNRIGDEGAKSISEMK 459
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+L L + + + D + +S + +LT L I + + G+ S + L L++ G +
Sbjct: 460 QLTLLYISSNEIGDEGVKFISEMKQLTLLQIYSNRIGDEGVKSISEMKQLTSLNISGNRI 519
Query: 287 LTE 289
E
Sbjct: 520 GDE 522
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV--GILA 138
SL F+++MK L L ++ + IGD+ V+ ++ ++ L L + + GV
Sbjct: 112 SLDNAKFISEMKQLTSLGIAENRIGDEGVKFIS----EMKQLTLLDICCNEIGVEGATSI 167
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDL--- 191
+ L L++SG +I D +S M L ++I++ I +G I ++ T L
Sbjct: 168 SEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSIS 227
Query: 192 -----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
V+ + +N L LN+ ++ D +S K+LI L + N + +
Sbjct: 228 DNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSI 287
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
S + +LT+L I + + G+ L LD+ G +
Sbjct: 288 SEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQI 327
>gi|116109772|gb|ABJ74265.1| CG11136-like protein [Drosophila affinis]
Length = 453
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 117
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I + + V +
Sbjct: 145 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKIKALGTADFVGLI-- 202
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 203 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 261
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 262 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 310
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 311 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 369
>gi|225862529|ref|YP_002747907.1| lpxtg-motif cell wall anchor domain protein [Bacillus cereus
03BB102]
gi|225789969|gb|ACO30186.1| lpxtg-motif cell wall anchor domain protein [Bacillus cereus
03BB102]
Length = 1186
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 30/229 (13%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
V+ L +++LE L L +D+I + L ++ T+ E +
Sbjct: 238 VSGLEYMTNLENLMLEEVKLDNI----HFISKLRQLKSVSITYSELENIEPLAELENIEG 293
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L + N+ +S L+QMK ++ LDLSS+ I D + +LR+L L+N + S+A
Sbjct: 294 LSLRNNKISNLSPLSQMKKIKILDLSSNAIKDITPLFTV---TSLRDLALANNQISNAN- 349
Query: 135 GILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
LAG L ++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 --LAGIEQLKKVKNLSLSNNGLTN--IEHITPMKKLVELDLSKNELE------------- 392
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 -NIEPLSRLSTVQSLNLEENYISDIT--PLSQLTGLYDLKLGSNEIRDV 438
Score = 45.8 bits (107), Expect = 0.037, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 31 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 90
N +D L+ + NK L + +L +E L +++ L ++ + ++ L
Sbjct: 189 NVILDKQLQKHINKYNLGRDNLDAPI---TKEDLLKVKS--LIVVEAKSKGINDVSGLEY 243
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
M LE+L L + D++ ++ LR L + +S L N+E LSL
Sbjct: 244 MTNLENLMLEEVKL--DNIHFIS----KLRQLKSVSITYSELENIEPLAELENIEGLSLR 297
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
+I + +S +S M +K +D+S+ IK +T L + L L L
Sbjct: 298 NNKISN--LSPLSQMKKIKILDLSSNAIK--------------DITPLFTVTSLRDLALA 341
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
Q+S+A L + K++ +LSL N LT++ ++ + KL L + L N
Sbjct: 342 NNQISNANLAGIEQLKKVKNLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 393
Score = 38.1 bits (87), Expect = 7.5, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 30/244 (12%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
+N D L+ NK L++ +L +E L I+T L D + + +
Sbjct: 537 TNVIQDKELQRYINKYNLSRTNLDAPI---TKEDLLGIKT--LKITDGQSKGIKDISGIE 591
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
M LE+LDL + D ++ ++ + NL++++L+N + + L LE L++
Sbjct: 592 FMTNLENLDLEKIDLKD--IDFISNL-RNLKSVSLANNKIENIAP---LSKLEKLEKLNI 645
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----IQQVGAETDLVL------SLTALQ 199
S + + I + M SL ++ SN I IQQ+ L+L S+ +
Sbjct: 646 SHNNVKN--IESLFKMNSLTNLNASNNKINNATIQGIQQLKNLYVLILNNNEISSVETIS 703
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH----QLSSLSKLTNL 255
++ L L L+ QV D + PLS K L L+L + + D+S+ Q SL KL+
Sbjct: 704 EISMLNELELKGNQVVD--IKPLSKLKNLQWLNLSDNKIKDISIFTSMIQFFSL-KLSGN 760
Query: 256 SIRD 259
I+D
Sbjct: 761 EIQD 764
>gi|195154022|ref|XP_002017922.1| GL17042 [Drosophila persimilis]
gi|194113718|gb|EDW35761.1| GL17042 [Drosophila persimilis]
Length = 806
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 183 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 240
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 241 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 299
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 300 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 348
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 349 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 407
>gi|224073422|ref|XP_002304093.1| predicted protein [Populus trichocarpa]
gi|222841525|gb|EEE79072.1| predicted protein [Populus trichocarpa]
Length = 969
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 91 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSS--------AGVGILAGHL 141
K L+ LDL + ++G E + + LR L LS+ RF++ G+ +L+ L
Sbjct: 67 FKELQSLDLGYNGLVGCLENEGFQVLSSKLRELGLSDNRFNNDKSILSCFNGLKVLSSRL 126
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
LE L LSG Q +D ++ SLK +D+S Q+ A + L LQ+L
Sbjct: 127 KKLENLDLSGNQCNDTIFPALTGFSSLKSLDLSG-------NQLTASG--LRKLDFLQSL 177
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
L+ L+L+ T +S T F ST +E L L N SL L +L L LS+ +
Sbjct: 178 RSLKTLSLKDTNLSQGTFFNSSTLEE---LHLDNTSLPINFLQNTRALPALKVLSVGECD 234
Query: 262 L 262
L
Sbjct: 235 L 235
>gi|290979162|ref|XP_002672303.1| predicted protein [Naegleria gruberi]
gi|284085879|gb|EFC39559.1| predicted protein [Naegleria gruberi]
Length = 371
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 124/281 (44%), Gaps = 44/281 (15%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 64
+S+ N+ GV + N+ L L + + I EG ++ + L +++ T F
Sbjct: 57 ISYNNIGAEGVEHIGNLKQLTFLCIYHNNIGD--EGAKHLSALKQLTYLYTAF------- 107
Query: 65 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 124
+N + ++ ++K L +L++ S+ +GD+ + ++ + L NLN+
Sbjct: 108 -------------NNIGVEGVKYIIKLKQLSYLNICSNKVGDEGAKYLSEL-KQLTNLNI 153
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKG-- 180
SN+ + GV + + L IL++S I Y+ + L ++I SN DI+G
Sbjct: 154 SNSNICAKGVEHIT-EMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAK 212
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
+I ++ TDL +S + +E + + K+L L++ N + D
Sbjct: 213 YISEMKQLTDLNISYN---------NIGIEGAKY-------IGKLKQLTCLTIYNNYICD 256
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+S L++LTNL+I + + G + L LD+
Sbjct: 257 EGAKYISELNQLTNLNIYSNNIGDEGAKYISELKQLTNLDI 297
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+++++K L HL +SS+ IG + + ++ + L NL++S + GV + G+L L
Sbjct: 21 YISELKQLTHLYISSNKIGVEGAKYISEL-KQLTNLDISYNNIGAEGVEHI-GNLKQLTF 78
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L + I D ++S + L ++ + +G E + + L L
Sbjct: 79 LCIYHNNIGDEGAKHLSALKQLTYLYTA-------FNNIGVE-----GVKYIIKLKQLSY 126
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
LN+ +V D LS K+L +L++ N+++ + ++ +++LT L+I + G
Sbjct: 127 LNICSNKVGDEGAKYLSELKQLTNLNISNSNICAKGVEHITEMNQLTILNISTNNIGIEG 186
Query: 267 ---LGSFKPPRSLKL----LDLHGGWLLTE 289
+G K L + +D+ G ++E
Sbjct: 187 AKYIGKLKQLTCLNIYYSNIDIEGAKYISE 216
>gi|87307769|ref|ZP_01089912.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87289383|gb|EAQ81274.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 1283
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+L+ LN + + + SAG+ +LA + NLE +SL G + + ++ +P L F+++ T
Sbjct: 1104 DLKELNCNYSPYVSAGLPLLA-NCKNLEKISLMGVKFTREELRPIAELP-LTFVNLGATP 1161
Query: 178 IKG--FIQQVGAETDLVLS----------LTALQNLNHLERLNLEQTQVSDATLFPLSTF 225
++ AE+ L+ L A QN N L++L+L+ T ++D L
Sbjct: 1162 VQDEWLSDFTNAESLTYLNFASTKIGDKGLAAFQNCNALQQLSLQDTNITDEGLAYFYDC 1221
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
++L L L+N + D L + S KL + I +T +G+ K
Sbjct: 1222 RDLEILQLQNTKVRDFGLLRFKSCQKLKQVEISKTRVTAAGVDELK 1267
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
TD+ Q+G E L A QN + L+LE T+++D L +EL + LR
Sbjct: 904 TDLGFSFTQIGDE-----GLAAFQNSKKIVNLHLEHTKITDVGLAYFHDCRELKSIRLRQ 958
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
S+TD + SKL LS+ +T + +
Sbjct: 959 TSVTDAGVLPFKHCSKLEELSLATTNVTAAAV 990
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L + L TQ+ D L K++++L L + +TDV L +L +
Sbjct: 894 LTHLTHPEAFTDLGFSFTQIGDEGLAAFQNSKKIVNLHLEHTKITDVGLAYFHDCRELKS 953
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ +R +T++G+ FK L+ L L
Sbjct: 954 IRLRQTSVTDAGVLPFKHCSKLEELSL 980
>gi|228951810|ref|ZP_04113908.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|423423509|ref|ZP_17400540.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|423504975|ref|ZP_17481566.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449088218|ref|YP_007420659.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|228807733|gb|EEM54254.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|401115199|gb|EJQ23052.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|402455497|gb|EJV87280.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449021975|gb|AGE77138.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 755
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 273
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 330
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 293
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 317
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|229177836|ref|ZP_04305209.1| Internalin [Bacillus cereus 172560W]
gi|228605627|gb|EEK63075.1| Internalin [Bacillus cereus 172560W]
Length = 766
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|229189511|ref|ZP_04316527.1| Internalin [Bacillus cereus ATCC 10876]
gi|228593956|gb|EEK51759.1| Internalin [Bacillus cereus ATCC 10876]
Length = 766
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|229010725|ref|ZP_04167922.1| Internalin [Bacillus mycoides DSM 2048]
gi|228750399|gb|EEM00228.1| Internalin [Bacillus mycoides DSM 2048]
Length = 760
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423486542|ref|ZP_17463224.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
gi|423492266|ref|ZP_17468910.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|423500943|ref|ZP_17477560.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401154267|gb|EJQ61685.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401156550|gb|EJQ63954.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|402439323|gb|EJV71330.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
Length = 766
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|224124658|ref|XP_002330078.1| predicted protein [Populus trichocarpa]
gi|222871503|gb|EEF08634.1| predicted protein [Populus trichocarpa]
Length = 1228
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++++ LE LDL+ + +D +++C L++L+LS+ + + +G+ +L+ L LE
Sbjct: 121 SKLRKLEVLDLTRNRFNNDK-GILSCFNGLSALKSLDLSDNQLTGSGLKVLSSRLKKLEN 179
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L LS Q +D S ++ SLK +D+S ++ G +V + L LE
Sbjct: 180 LHLSANQCNDSIFSSITGFSSLKSLDLSYNEVTGSGLKVLSSR-----------LKRLEN 228
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
L+L Q +D+ L+ F L L+L LT S+
Sbjct: 229 LDLSDNQCNDSIFSSLTGFSSLKSLNLSYNQLTGSSM 265
>gi|229166263|ref|ZP_04294022.1| Internalin [Bacillus cereus AH621]
gi|423594649|ref|ZP_17570680.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
gi|228617208|gb|EEK74274.1| Internalin [Bacillus cereus AH621]
gi|401223601|gb|EJR30169.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
Length = 766
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|290973418|ref|XP_002669445.1| predicted protein [Naegleria gruberi]
gi|284082993|gb|EFC36701.1| predicted protein [Naegleria gruberi]
Length = 280
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 54 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEM 111
GT I + A + E L+FLD+ + +S +++M+ L LD+ + IGD +
Sbjct: 34 GTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDIYGNGIGDKGAKS 93
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
++ + L +L++ G QI D +S M L F+
Sbjct: 94 IS--------------------------EMQQLTLLNIGGNQIGDEGAKLISQMKQLTFL 127
Query: 172 DI--SNTDIKGF-----IQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 219
DI + D++G +QQ +G+ V + L + L LN+ + + D
Sbjct: 128 DIYCNEIDVEGAKCISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGA 187
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
+S K+L L + + +S + +LT+L+I + + + G + L L
Sbjct: 188 KLISQMKQLTFLDIYCNEIGVEGAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFL 247
Query: 280 DLH 282
D++
Sbjct: 248 DIY 250
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNL 144
++QMK L LD+ + I VE C+ L +LN+ + GV L+ + L
Sbjct: 117 LISQMKQLTFLDIYCNEI---DVEGAKCISEMQQLTSLNIGSNEIGVEGVKFLS-EMQQL 172
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
L++ I D +S M L F+DI + ++G E ++ + L
Sbjct: 173 TSLNIGENLIGDEGAKLISQMKQLTFLDI-------YCNEIGVE-----GAKSISEMQQL 220
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
LN+ + + D +S K+L L + + +S + +LT+L+I +
Sbjct: 221 TSLNIGENGIGDEGAKLISEMKQLTFLDIYCNEIGVEGAKYISEMKQLTSLNISN 275
>gi|365162122|ref|ZP_09358255.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363619035|gb|EHL70365.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 755
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 273
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 330
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 293
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 317
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|423647357|ref|ZP_17622927.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
gi|401286175|gb|EJR92008.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
Length = 760
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|423663695|ref|ZP_17638864.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
gi|401295595|gb|EJS01219.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
Length = 760
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|228938544|ref|ZP_04101152.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971423|ref|ZP_04132049.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978036|ref|ZP_04138415.1| Internalin [Bacillus thuringiensis Bt407]
gi|228781697|gb|EEM29896.1| Internalin [Bacillus thuringiensis Bt407]
gi|228788290|gb|EEM36243.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228821142|gb|EEM67159.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
Length = 766
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|423601235|ref|ZP_17577235.1| hypothetical protein III_04037 [Bacillus cereus VD078]
gi|401230662|gb|EJR37168.1| hypothetical protein III_04037 [Bacillus cereus VD078]
Length = 760
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423366834|ref|ZP_17344267.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
gi|401087016|gb|EJP95231.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
Length = 760
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423455119|ref|ZP_17431972.1| hypothetical protein IEE_03863 [Bacillus cereus BAG5X1-1]
gi|401134902|gb|EJQ42509.1| hypothetical protein IEE_03863 [Bacillus cereus BAG5X1-1]
Length = 752
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 129
L LD+SN+ ++ LT+MK D++S + + +E VA + L LN++N +
Sbjct: 288 LESLDLSNNKITNVAPLTEMK-----DVTSLYLAGNQIEDVAPLAKMEQLDYLNVANNKI 342
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 184
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 343 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 399
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 400 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 455
Query: 245 QLSSLSKLTNLS-----IRDA 260
+S+L KL LS IRD
Sbjct: 456 PVSNLKKLVFLSFVANEIRDV 476
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 244 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 180
+ V L + ++ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 300 N--VAPLT-EMKDVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 354
Query: 181 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 221
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 355 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 412
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
LS +L L+L N L D++ LSSL L L +
Sbjct: 413 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|423509242|ref|ZP_17485773.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
gi|402456533|gb|EJV88306.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
Length = 759
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|71650734|ref|XP_814059.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878999|gb|EAN92208.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 351 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE 410
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
+ + A L L +L L + + D +++ + P L +D+ Q G T L
Sbjct: 411 SLQWLRA--LNQLRVLDLGYSSVTDDSLTALRFCPELAKLDL---------QWCGRITSL 459
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 250
+ AL + L LNL +T V+D L PL F L +SL +++DV++ L +L+
Sbjct: 460 KCLVGAL--CDSLRELNLTETSVTDEGLVPLKYFAALEWISLEGCGAVSDVNV--LCNLT 515
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
+L + + +TN G+ S ++L+++ + + LT+ + L
Sbjct: 516 RLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDASFL 558
>gi|325107838|ref|YP_004268906.1| hypothetical protein Plabr_1272 [Planctomyces brasiliensis DSM
5305]
gi|324968106|gb|ADY58884.1| hypothetical protein Plabr_1272 [Planctomyces brasiliensis DSM
5305]
Length = 239
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 75 LDVSNSSL-SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
LD N L SRF L ++K + + D +++ + + +LR +NL N +F+ G
Sbjct: 87 LDADNQKLLSRFTQLDRLKL-------GAPVDDATLKQIGEL-QSLRIVNLPNGQFTDDG 138
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
+ LAG LP LE+L S + D +S M +P+L+F+ + + I TD
Sbjct: 139 LKELAG-LPKLELLRFSSPHVTDDGLSVMQDLPALRFVHLIDVPI----------TD--A 185
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
L L N++ LE L+ Q +D L L + +HL
Sbjct: 186 GLKHLHNVDTLESFYLDGGQTTDEGLRDLLAARPELHL 223
>gi|423472694|ref|ZP_17449437.1| hypothetical protein IEM_03999 [Bacillus cereus BAG6O-2]
gi|402427629|gb|EJV59734.1| hypothetical protein IEM_03999 [Bacillus cereus BAG6O-2]
Length = 752
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 244 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 299
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 180
+ V L + N+ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 300 N--VAPLT-EMKNVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 354
Query: 181 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 221
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 355 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 412
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
LS +L L+L N L D++ LSSL L L +
Sbjct: 413 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 447
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 129
L LD+SN+ ++ LT+MK + L L+ + I D VA + L LN++N +
Sbjct: 288 LESLDLSNNKITNVAPLTEMKNVTSLYLAGNQIED-----VAPLAKMEQLDYLNVANNKI 342
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 184
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 343 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 399
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 400 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 455
Query: 245 QLSSLSKLTNLS-----IRDA 260
+S+L KL LS IRD
Sbjct: 456 PVSNLKKLVFLSFVANEIRDV 476
>gi|402561579|ref|YP_006604303.1| internalin [Bacillus thuringiensis HD-771]
gi|401790231|gb|AFQ16270.1| internalin [Bacillus thuringiensis HD-771]
Length = 760
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 38/262 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P + N
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLPLKDLVLTRNN------ 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VQDLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIRDAVLTN 264
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|384185344|ref|YP_005571240.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|410673634|ref|YP_006926005.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452197655|ref|YP_007477736.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|326939053|gb|AEA14949.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|409172763|gb|AFV17068.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452103048|gb|AGF99987.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 760
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|405751552|ref|YP_006675017.1| internalin I [Listeria monocytogenes SLCC2378]
gi|404220752|emb|CBY72115.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2378]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNN-- 529
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
N + + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 530 NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ + D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NVSDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|71668063|ref|XP_820975.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886340|gb|EAN99124.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 930
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 347 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE 406
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
+ + A L L +L L + + D +++ + P L +D+ Q G T L
Sbjct: 407 SLQWLRA--LNQLRVLDLGYSSVTDDSLTALRFCPELAKLDL---------QWCGRITSL 455
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 250
+ + AL + L LNL +T V+D L PL F L +SL +++DV++ L +L+
Sbjct: 456 MCLVGAL--CDSLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV--LCNLT 511
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
+L + + +TN G+ S ++L+++ + + LT+
Sbjct: 512 RLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTD 550
>gi|116109812|gb|ABJ74285.1| CG11136-like protein [Drosophila miranda]
gi|116109814|gb|ABJ74286.1| CG11136-like protein [Drosophila miranda]
gi|116109816|gb|ABJ74287.1| CG11136-like protein [Drosophila miranda]
gi|116109818|gb|ABJ74288.1| CG11136-like protein [Drosophila miranda]
gi|116109820|gb|ABJ74289.1| CG11136-like protein [Drosophila miranda]
gi|116109822|gb|ABJ74290.1| CG11136-like protein [Drosophila miranda]
gi|116109824|gb|ABJ74291.1| CG11136-like protein [Drosophila miranda]
gi|116109826|gb|ABJ74292.1| CG11136-like protein [Drosophila miranda]
gi|116109828|gb|ABJ74293.1| CG11136-like protein [Drosophila miranda]
gi|116109830|gb|ABJ74294.1| CG11136-like protein [Drosophila miranda]
gi|116109832|gb|ABJ74295.1| CG11136-like protein [Drosophila miranda]
gi|116109834|gb|ABJ74296.1| CG11136-like protein [Drosophila miranda]
gi|116109836|gb|ABJ74297.1| CG11136-like protein [Drosophila miranda]
gi|116109838|gb|ABJ74298.1| CG11136-like protein [Drosophila miranda]
gi|116109840|gb|ABJ74299.1| CG11136-like protein [Drosophila miranda]
gi|116109842|gb|ABJ74300.1| CG11136-like protein [Drosophila miranda]
gi|116109844|gb|ABJ74301.1| CG11136-like protein [Drosophila miranda]
gi|116109846|gb|ABJ74302.1| CG11136-like protein [Drosophila miranda]
Length = 473
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L+ + AL LDL+++ I ++ VG NL L LSN + SS + +L LE+
Sbjct: 168 LSTLGALNRLDLATNKI--KALGTADFVGLTNLVYLELSNNQISSISQRTFS-NLRKLEV 224
Query: 147 LSLSGTQIDDYAIS--YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
L L G ++ DYA S Y+S SL+ +D++ ++ G LS L + +L
Sbjct: 225 LKLGGNRLGDYAQSLRYLSQCLSLRQLDLTANNLNG-----------PLSAQTLAGMRNL 273
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
E LNL + + L+ F L+ LSLR+ + + H L L +L + +
Sbjct: 274 ESLNLNRNMIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFYGLGALDSLDLSYNGIVA 333
Query: 265 SGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
S + L +LDL +L LT D I
Sbjct: 334 ISSSSLQHLSRLTVLDLTHNFLRALTSDLI 363
>gi|424713203|ref|YP_007013918.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
gi|424012387|emb|CCO62927.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
Length = 1631
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A
Sbjct: 330 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNN-- 385
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
N + + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 386 NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 445
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 446 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 505
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 506 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 555
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 556 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 588
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 241 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 298
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 299 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 352
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ + D IS + MP+L+ +D SN
Sbjct: 353 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNN 407
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 408 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 462
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 463 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 521
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 161 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 216
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 217 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 272
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 273 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 327
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 328 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 385
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 386 NVSDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 427
>gi|290974856|ref|XP_002670160.1| predicted protein [Naegleria gruberi]
gi|284083716|gb|EFC37416.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F++++K L L++ + I D+ + ++ + L +LN+S S+ G L L L +
Sbjct: 125 FISELKNLTLLEIEACRICDEGAKSISEL-KQLTHLNISYNNISNLGSKYLT-ELKQLTV 182
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSL-------TA 197
L+L I + Y+S + L +DISN DI G G + L L + T
Sbjct: 183 LTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTE 242
Query: 198 LQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LQ ++ +++ LN+ V D +S K+L L + + ++ +S L +LT+
Sbjct: 243 LQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSDISTEGAKHISELKQLTD 302
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L+I + + G + L++LD+
Sbjct: 303 LNIGENNIGGEGAIAISKMNQLRILDI 329
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++++MK L L++ + IG + VE ++ + NL L + R G ++ L L
Sbjct: 101 YISKMKQLTELNVGWNGIGKEGVEFISEL-KNLTLLEIEACRICDEGAKSIS-ELKQLTH 158
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++S I + Y++ + L + + + +I + G + + LN L
Sbjct: 159 LNISYNNISNLGSKYLTELKQLTVLTLCDCNI----SEEGCK--------YISELNQLTD 206
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++ + + +S K+L+ L + ++ L ++S + ++TNL+I + + G
Sbjct: 207 LDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEG 266
Query: 267 LGSFKPPRSLKLLDLHGGWLLTEDA 291
+ L L++ + TE A
Sbjct: 267 AKYISDMKQLTKLEVVRSDISTEGA 291
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
MK L L + + IG + V+ + C NL LN+ G ++ + L L++
Sbjct: 58 MKGLTVLS-AENCIGTEGVKHI-CKMNNLTKLNIERNEIGEEGAKYIS-KMKQLTELNVG 114
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
I + ++S + +L ++I I GA+ S++ L+ L HL N+
Sbjct: 115 WNGIGKEGVEFISELKNLTLLEIEACRI----CDEGAK-----SISELKQLTHL---NIS 162
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
+S+ L+ K+L L+L + ++++ +S L++LT+L I + + +G+
Sbjct: 163 YNNISNLGSKYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYI 222
Query: 271 KPPRSLKLLDLHG 283
+ L L ++G
Sbjct: 223 SGMKQLLFLYIYG 235
>gi|46906570|ref|YP_012959.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091468|ref|ZP_00229265.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
gi|81830300|sp|Q723X5.1|INLI_LISMF RecName: Full=Internalin-I; Flags: Precursor
gi|46879835|gb|AAT03136.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47020145|gb|EAL10881.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNN-- 529
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
N + + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 530 NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ + D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NVSDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|423382828|ref|ZP_17360084.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|423530712|ref|ZP_17507157.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
gi|401643688|gb|EJS61382.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|402446046|gb|EJV77910.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
Length = 760
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVTPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VTPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|229144033|ref|ZP_04272449.1| Internalin [Bacillus cereus BDRD-ST24]
gi|228639430|gb|EEK95844.1| Internalin [Bacillus cereus BDRD-ST24]
Length = 755
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 273
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 330
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 293
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|229108157|ref|ZP_04237780.1| hypothetical protein bcere0018_4470 [Bacillus cereus Rock1-15]
gi|228675287|gb|EEL30508.1| hypothetical protein bcere0018_4470 [Bacillus cereus Rock1-15]
Length = 902
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
AG L G L NL+ +S + + + +++ M L ++G
Sbjct: 346 AG---LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSK 386
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+ ++ LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 387 NELVDLTPLSKLSGLQKLNLEENYISDIT--PLSQLTGLYDLKLGSNEIRDV 436
>gi|51850115|dbj|BAD42399.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 1035
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 144
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 98 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 154
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
E L+++G +I D ++ PSLK ++ ++ I ++ AE+ L
Sbjct: 155 ESLNVAGAEIGDGGARLLAANPSLKSLNAASGGISASGARMLAESPT------------L 202
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 261
E L+L Q + DA L+ + L HL++RN +TDV L+ L +L + + V
Sbjct: 203 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDVGTRALALNPALVSLDLGNLVTET 262
Query: 262 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
+T G + RSLK L + G L +D + +
Sbjct: 263 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 313
>gi|296502010|ref|YP_003663710.1| internalin [Bacillus thuringiensis BMB171]
gi|423588187|ref|ZP_17564274.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
gi|296323062|gb|ADH05990.1| internalin [Bacillus thuringiensis BMB171]
gi|401226695|gb|EJR33229.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
Length = 760
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|254992878|ref|ZP_05275068.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes FSL J2-064]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNNNI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 3.9, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|254825619|ref|ZP_05230620.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
gi|293594862|gb|EFG02623.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNNNI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 3.9, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|423629712|ref|ZP_17605460.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
gi|401266846|gb|EJR72915.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
Length = 760
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|254854582|ref|ZP_05243930.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300766483|ref|ZP_07076434.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404279887|ref|YP_006680785.1| internalin I [Listeria monocytogenes SLCC2755]
gi|404285703|ref|YP_006692289.1| internalin I [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258607981|gb|EEW20589.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300512809|gb|EFK39905.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404226522|emb|CBY47927.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244632|emb|CBY02857.1| internalin I (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNNNI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 4.0, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|405754422|ref|YP_006677886.1| internalin I [Listeria monocytogenes SLCC2540]
gi|404223622|emb|CBY74984.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNNNI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 4.0, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|226222958|ref|YP_002757065.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731097|ref|YP_006204593.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406703104|ref|YP_006753458.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
gi|225875420|emb|CAS04117.1| Putative internalin proteins, putative peptidoglycan bound protein
(LPXTG motif) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|384389855|gb|AFH78925.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406360134|emb|CBY66407.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
Length = 1775
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNNNI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 4.0, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|423555811|ref|ZP_17532114.1| hypothetical protein II3_01016 [Bacillus cereus MC67]
gi|401196153|gb|EJR03099.1| hypothetical protein II3_01016 [Bacillus cereus MC67]
Length = 691
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 183 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 238
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 180
+ V L + N+ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 239 N--VAPLT-EMKNVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 293
Query: 181 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 221
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 294 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 351
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
LS +L L+L N L D++ LSSL L L +
Sbjct: 352 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 386
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 129
L LD+SN+ ++ LT+MK + L L+ + I D VA + L LN++N +
Sbjct: 227 LESLDLSNNKITNVAPLTEMKNVTSLYLAGNQIED-----VAPLAKMEQLDYLNVANNKI 281
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 184
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 282 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 338
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 339 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 394
Query: 245 QLSSLSKLTNLS-----IRDA 260
+S+L KL LS IRD
Sbjct: 395 PVSNLKKLVFLSFVANEIRDV 415
>gi|440800155|gb|ELR21198.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 305
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 31/237 (13%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF-SSAGVGILAGHLPNLE 145
L L+ L I D ++ + LR LNL + + + +G+ L H L+
Sbjct: 62 ILKSCPQLQALHFEGCRIADAALRAIIAANPPLRALNLRDCKMVTDSGMKDLFAHFAQLQ 121
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
L++SG +I I SL+ +DIS T I+G A TD+ + L
Sbjct: 122 YLNVSGCKIQRLGIGEAESQDSLRLLDISRTTIRG-----EALTDIA------KRFPRLF 170
Query: 206 RLNLEQ-TQVSDATLFPL--STFKELIHLSLR-NASLTDVSLHQLSSL-----SKLTNL- 255
LNLE+ +QV++A L S L L+L N+S+TD L ++ L +L NL
Sbjct: 171 HLNLEECSQVNEAWLKTCFSSPCPALTSLNLSWNSSVTDDCLESVTKLVATHCPRLENLQ 230
Query: 256 -----SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE 307
I D LT L P SL+ L + G +T + + F + P V E
Sbjct: 231 LEQCYKITDHCLT--LLADSCP--SLRFLKIRGCNKITAEGLAAFASLLPGCRVLQE 283
>gi|350425720|ref|XP_003494211.1| PREDICTED: hypothetical protein LOC100742728 [Bombus impatiens]
Length = 971
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 4 RLSFLNLAWTGVTKLPN--ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
RL ++ + TG+ ++P S+ L L+ + +I G+ + PL +I
Sbjct: 386 RLETVDASRTGLARVPAALTRSVRALRLAGNKLTTIRGGDLDSYPLLRI----------- 434
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
++ S +D+ N +L R ++ LE LD+S +++ V++ A + +L N
Sbjct: 435 -----LDISENRLIDIENDALGR------LEVLEELDISGNVL----VKIPASLPNSLTN 479
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
L L R ++ + L G L NL+ L+L+ I+ + + +P L+ +D+S+ IK
Sbjct: 480 LKLQRNRITTLKIDDLQG-LYNLKSLTLNDNDINAIEVGALGQLPVLEELDLSDNPIKTL 538
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTD 240
+ + L + L LE+ EQ+ ++ FP+ T + L+ L + R+ L
Sbjct: 539 PANTLSGPSNLAKLR-MSGLTSLEQKQEEQSDMA----FPVPTPERLVFLDVSRSPVLAR 593
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR---SLKLLDLHGG-WLLTED 290
L ++LS +L D TNS F P L++L+L W TED
Sbjct: 594 QLLADDAALSACKSLVQLDLSRTNSTSLRFDLPYMLPQLRILNLSANHWDCTED 647
>gi|290994276|ref|XP_002679758.1| predicted protein [Naegleria gruberi]
gi|284093376|gb|EFC47014.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 46 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSM 103
L ++++G F +E EA L E L+ LD+S + + +L++MK L L++ +
Sbjct: 3 QLISLNISGNEFGDE-EAKLISEMKQLTSLDISGNRIGDEGAKYLSEMKQLISLNIGENE 61
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSSAGV--GILAGHLPNLEILSLSGTQIDDYAISY 161
IGD+ +++ + R L N F+ G+ L + L L++S +I +
Sbjct: 62 IGDEGAKLI----SETRQLASLNICFTQIGIEEAKLISEMRQLTSLNISDNRICVEGAKW 117
Query: 162 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 221
+S M L +DIS I GA+T + + L L++ ++ D
Sbjct: 118 ISEMRQLTSLDISGNRIG----DEGAKT--------ISEMKQLTSLDISYNRIGDEGAKF 165
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+S K+LI L++R + D + +S + +LT+L+ +
Sbjct: 166 ISEMKQLISLNIRGNRIGDEGVKYISEMKQLTSLTYK 202
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ LD+S + +S L+ + L +DLSS+ I D +++++ + NL +++LS + S
Sbjct: 95 LTTLDLSENQISDIKPLSNLTNLTDIDLSSNQISD--IKVLSNL-TNLTDIDLSKNQISD 151
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
V +L NL +L LS QI D I +S + +L + +S I
Sbjct: 152 IKV---LSNLTNLTVLDLSDNQISD--IKVLSNLTNLTSVKLSENQISD----------- 195
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ L NL +L L+L Q+SD + LS L +LSL N + D+ + LS+L+
Sbjct: 196 ---IEVLSNLTNLTVLDLGYNQISDIKV--LSNLTNLTYLSLWNNQIGDIKV--LSNLTN 248
Query: 252 LTNLSIRD 259
LT+LS+ D
Sbjct: 249 LTSLSLWD 256
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ LD+ + +S L+ + L +L L ++ IGD +++++ + NL +L+L + + S
Sbjct: 205 LTVLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGD--IKVLSNL-TNLTSLSLWDNQISD 261
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+L NL L L QI D +S ++ + L D DIK + TD
Sbjct: 262 IKP---LSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQIADIKPL-SNLTNLTD 317
Query: 191 LVLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLT---- 239
L LS + L NL L L+L + Q++D + PLS L LSL RN S+
Sbjct: 318 LDLSKNQIGDIKPLSNLTSLTSLDLSKNQIAD--IKPLSNLTNLTSLSLWRNQSIDIELL 375
Query: 240 ---------DVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFKPPRSL-KLLDLH 282
D+S +Q+S + L+NL+ + D L+ + + KP +L KL DL
Sbjct: 376 SNLTNLTSLDLSENQISDIKPLSNLTNLTDIDLSENQISDIKPLSNLTKLEDLQ 429
>gi|254933382|ref|ZP_05266741.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|405748685|ref|YP_006672151.1| internalin I [Listeria monocytogenes ATCC 19117]
gi|424822071|ref|ZP_18247084.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|293584944|gb|EFF96976.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|332310751|gb|EGJ23846.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|404217885|emb|CBY69249.1| internalin I (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 1775
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 474 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLKEFYAQNNNI 531
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 532 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLET 589
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL L + F+ G LP LEIL ++ ++ M
Sbjct: 590 FYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTM 649
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFP 221
+ L+ +++ N ++ G E +L +AL +L +L LNL + +SD +
Sbjct: 650 DGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNGYISDIS--G 699
Query: 222 LSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 253
LST LI+L+L + + D+S L L++L +LT
Sbjct: 700 LSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAVTDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA----NLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAVTDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NISDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|422417931|ref|ZP_16494886.1| internalin-I [Listeria seeligeri FSL N1-067]
gi|313634795|gb|EFS01226.1| internalin-I [Listeria seeligeri FSL N1-067]
Length = 1687
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LNL+ V+ + N SL +N+SN +I + + E L + F
Sbjct: 465 LPLLDWLNLSENQLKDVSAINNFPSLNYINVSNNSITTFGKMTE----LPSLKEFYGQFN 520
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG------------- 105
+ + + L L+VSN+ ++ + L++LD+ S+ I
Sbjct: 521 KVTDISMIHDMPNLRKLNVSNNLINNLGTFENLPKLQNLDIHSNKITNTTVIHDFPSLET 580
Query: 106 -DDSVEMVACVGA-----NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 159
D S +++ +G + +NLS+ R S G LP L+ L ++ +
Sbjct: 581 YDASSNLISTLGTMDNLPEVTTINLSSNRIPSLEP---IGDLPKLDTLLVNSNSSYLRTV 637
Query: 160 SYMSMMPSLKFIDISNTDIK--GFIQQVGAETDL-------------VLSLTALQNLNHL 204
+ +P+L+ +++++ I G + A +DL ++ L+ L +L +L
Sbjct: 638 GSLDGLPALQILELNSNYINYSGKEATLSAFSDLTNLTELSMKDNYYIVDLSGLSSLTNL 697
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L L+ ++ D T PL EL L+L + D+S LSSL+KLTNL ++
Sbjct: 698 RYLYLDNNKIVDVT--PLGNLTELRELTLGTNKIQDIS--ALSSLNKLTNLVVK 747
Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 148/335 (44%), Gaps = 55/335 (16%)
Query: 22 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 81
+S++ ++ SNCT + L I L+G + + E T L + +++N +
Sbjct: 309 TSIQLIDASNCTDMETVGDISGITTLEMIQLSGCSKLKEI-------TDLKNLPNLTNIT 361
Query: 82 LSRFCFLTQMKALEHLDLSSSMI--GDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGIL 137
+ C + + LE+L ++I G++++ V + L+ + L ++ G
Sbjct: 362 ANN-CIIEDLGTLENLPKLQTLILSGNENLTDVDAINDLPQLKTVALDGCGITNIGT--- 417
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
+LP LE L + G ++ D IS ++ +P L ++D S + ++
Sbjct: 418 LENLPKLEKLDIKGNKVTD--ISEITDLPRLSYLDASENQLT--------------TIGT 461
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSL------- 249
L L L+ LNL + Q+ D + ++ F L ++++ N S+T + +L SL
Sbjct: 462 LAKLPLLDWLNLSENQLKDVS--AINNFPSLNYINVSNNSITTFGKMTELPSLKEFYGQF 519
Query: 250 SKLTNLS-------IRDAVLTN---SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
+K+T++S +R ++N + LG+F+ L+ LD+H + I F
Sbjct: 520 NKVTDISMIHDMPNLRKLNVSNNLINNLGTFENLPKLQNLDIHSNKITNTTVIHDF---- 575
Query: 300 PRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLV 334
P +E + S + + N P + +L ++ +
Sbjct: 576 PSLETYDASSNLISTLGTMDNLPEVTTINLSSNRI 610
>gi|423643526|ref|ZP_17619144.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
gi|401274106|gb|EJR80084.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
Length = 760
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTRLKQLHLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|283777859|ref|YP_003368614.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
gi|283436312|gb|ADB14754.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Length = 1487
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 114 CVGANLRNLNLSNTRFSSAGVGILAGHLP--NLEILSL--SGTQIDDYAISYMSMMPSLK 169
+G + N S F V LP +LEIL++ G + D ++ + + P L+
Sbjct: 643 ALGGRVTAANSSGREF----VATTPTELPAESLEILAIDFEGRGVTDSDLASLELAPGLR 698
Query: 170 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+ ++ T I TD + +L L L +L+L +T +++ L L+ +L
Sbjct: 699 QLSLAATPI----------TDT--GIASLAKLKSLAKLSLARTAITNKGLESLARLSQLA 746
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
L L + +TD L +L +LSKL L + D L+++GL +SL+LL + G +L+E
Sbjct: 747 ELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLL-VASGTMLSE 805
Query: 290 DAILQFCKMHPRIEV-W 305
P+ E+ W
Sbjct: 806 RGHGVLTAALPQTEITW 822
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ ++V+ S LS L + LE LDLSS+ + D++ + + + ++LR L + +
Sbjct: 1095 LAGIEVAPSDLS---LLKKCPQLEWLDLSSTGLSDEASQQLVGL-SSLRELAVPKNPLTD 1150
Query: 132 AGVGILAGHLPNLE---------------ILSLSGT-QIDDYAISYMSMMPSLKFIDISN 175
AG L +PN IL GT ++D A++ +P K +
Sbjct: 1151 AGQEELIAAMPNCHVVGDPLDPQRLAARWILEKRGTVELDTGAVTSPKELPRDK-CHVLA 1209
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
D+ AE V++ + LE L L T ++DA L + K L L L N
Sbjct: 1210 IDLAELANLKAAEVIQVIA-----GCSELESLRLSDTAITDADLAAIGKLKLLKKLYLAN 1264
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++TD L +L+ L L L + +T +GL +F+ SL+ L+L
Sbjct: 1265 LAITDDGLAKLAELELLEVLDVSGGRITGAGLANFRSASSLQELNL 1310
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 93 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSG 151
+L+ L+LS++M+ D ++ +A + +L +L++S R S AG+ LAG L L L L G
Sbjct: 1304 SLQELNLSNTMLTDPNLAAIAPM-TSLISLDMSACRGVSDAGLKKLAG-LTQLRSLGLRG 1361
Query: 152 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 211
T++ D A ++ L+ +D+ +T I G E L L+ L +
Sbjct: 1362 TKLTDAAAESLASYAKLEQLDLDSTSIG----DSGVEKLLSLTSLRRLVL--------AK 1409
Query: 212 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
T V+D + L+ K+L +SL S+T+ + +L
Sbjct: 1410 TSVTDGGVASLAKLKDLRSVSLVRTSVTEAACTEL 1444
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
+T ++ V L LP L+ L LSGT++D + ++ +P L + ++ ++
Sbjct: 1048 DTAVTAPAVNGLLAQLPQLQRLYLSGTKVDRGVLVAVTNLPKLSHLSLAGIEV------- 1100
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
A +DL L L+ LE L+L T +SD L L L++ LTD +
Sbjct: 1101 -APSDLSL----LKKCPQLEWLDLSSTGLSDEASQQLVGLSSLRELAVPKNPLTDAGQEE 1155
Query: 246 L 246
L
Sbjct: 1156 L 1156
>gi|229108884|ref|ZP_04238489.1| Internalin [Bacillus cereus Rock1-15]
gi|228674653|gb|EEL29892.1| Internalin [Bacillus cereus Rock1-15]
Length = 766
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|229043169|ref|ZP_04190893.1| Internalin [Bacillus cereus AH676]
gi|228726176|gb|EEL77409.1| Internalin [Bacillus cereus AH676]
Length = 766
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|229160381|ref|ZP_04288379.1| Internalin [Bacillus cereus R309803]
gi|228623105|gb|EEK79933.1| Internalin [Bacillus cereus R309803]
Length = 747
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 43/217 (19%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 130
L L V+N+ + F T +K L+HL L ++ I V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRANEI----VDVTPLIKMDNLDSLDLSNNKIT 294
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 180
+ + + N++ L LSG QI+D ++ ++ M L +++++N I
Sbjct: 295 NVAPLV---EMKNVKSLYLSGNQIED--VTALAKMEQLDYLNLANNKITNVAPLSALKNV 349
Query: 181 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 221
++ G + DLVL+ L+ + +N L +L++ + Q+ D T
Sbjct: 350 TYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGIDQMNQLSKLSIGKNQIEDVT--S 407
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L+ +L L L N L D++ LSSL L L +
Sbjct: 408 LAKMTQLTELDLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|357622044|gb|EHJ73664.1| putative c-Maf-inducing protein Tc-mip isoform isoform 1 [Danaus
plexippus]
Length = 905
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+LR LNL T+F +GV ++A HLP L++L+L T + D I +S + SL+ +++++T
Sbjct: 819 SLRYLNLWATKFGDSGVQLIAEHLPRLQVLNLCETPVSDKGIEALSGLSSLRRLNLNST- 877
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 214
++ AE VL Q L HL+ ++ T+
Sbjct: 878 ------KLSAEAFQVLR----QRLPHLQEYDIRYTEA 904
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 127 TRFSSAGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
R + A V L AG L NLE LSL+ T + ++ +PSL+++++ T Q
Sbjct: 777 VRATDADVAALLEAGALGNLECLSLAFTSVTSECAQHLIKLPSLRYLNLWATKFGDSGVQ 836
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+ AE +L L+ LNL +T VSD + LS L L+L + L+ +
Sbjct: 837 LIAE-----------HLPRLQVLNLCETPVSDKGIEALSGLSSLRRLNLNSTKLSAEAFQ 885
Query: 245 QL-SSLSKLTNLSIR 258
L L L IR
Sbjct: 886 VLRQRLPHLQEYDIR 900
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 72 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L L ++ +S++ C L ++ +L +L+L ++ GD V+++A L+ LNL T
Sbjct: 796 LECLSLAFTSVTSECAQHLIKLPSLRYLNLWATKFGDSGVQLIAEHLPRLQVLNLCETPV 855
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM-MPSLKFIDISNTD 177
S G+ L+G L +L L+L+ T++ A + +P L+ DI T+
Sbjct: 856 SDKGIEALSG-LSSLRRLNLNSTKLSAEAFQVLRQRLPHLQEYDIRYTE 903
>gi|389592901|ref|XP_001681716.2| putative surface antigen protein [Leishmania major strain Friedlin]
gi|321399718|emb|CAJ02964.2| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 560
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 89 TQMKALEHLDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP----- 142
++MK+L +L+L + + G + V+ A+LR LNL T+ S G LP
Sbjct: 251 SEMKSLTNLELEGTQVSGSLPPQWVSM--ASLRTLNLEGTQVS--------GTLPPGWSE 300
Query: 143 --NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE----TDLVLSLT 196
+L L L GTQ+ S + SL+ +++ T + G + +E T+L L T
Sbjct: 301 MKSLTNLELEGTQVSGTLPPGWSSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGT 360
Query: 197 --------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
+ L LNLE TQVS A K L +L L L+ +
Sbjct: 361 QVSGTLPPGWSEMKSLRTLNLEGTQVSGALPPGWGEMKSLTNLYLEGTQLSGSLPTEWRG 420
Query: 249 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ LTNL + ++ S + SL+ LDL G
Sbjct: 421 MKSLTNLYLEGTQVSGSLPPQWSSLTSLRTLDLEG 455
>gi|229029099|ref|ZP_04185198.1| Internalin [Bacillus cereus AH1271]
gi|228732379|gb|EEL83262.1| Internalin [Bacillus cereus AH1271]
Length = 772
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLVEMKNVKSLYLSGNQIED--VTALAKM-EQLGYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLVKMTQLTELDLPNNELKDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ + + N++ L LSG QI+D
Sbjct: 305 TNVAPLV---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLGYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 374 KPLYSLPLKDLVLT 387
>gi|149174147|ref|ZP_01852775.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
gi|148847127|gb|EDL61462.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
Length = 476
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-- 178
L LS ++ + AG+ L G L L+LSGT++ D + ++ +P L +++ T +
Sbjct: 283 GLWLSRSKVTDAGIEYLRG-ATRLYSLNLSGTEVTDATLEHLKGLPELHSVNLRGTQVSP 341
Query: 179 KGFIQQVGAETDLVLSLTA-----LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
+G ++ + + + ++ L+N H +L L V+ L T + +L L
Sbjct: 342 RGVLELIASSDSMQIAFPGGWVWKLENA-HGFQLKLSSPAVTGELLKLFGTVRVQAYLDL 400
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
+LTD L L L L I + ++++GL SL+ LDL G + ED I
Sbjct: 401 DGIALTDEGLASLGGFEDLRTLRISNTQISSAGLNHLAGLASLRELDLRGSAVADED-IN 459
Query: 294 QFCKMHPRIEV-WHE 307
+ + P ++ W+E
Sbjct: 460 KLQRALPNCKIDWNE 474
>gi|87309359|ref|ZP_01091495.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
gi|87287998|gb|EAQ79896.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
Length = 351
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 47 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMI 104
L K+SL +E + L T L S LD+ S++ L Q+ LE L I
Sbjct: 76 LRKLSLQDVGMTDESASELAPLTKLQS-LDMRGVSITGEALQSLGQLTELERLLFRGQPI 134
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN---LEILSLSGTQIDDYAISY 161
D + +A + L+ L L +T S+ G+ HL N L+ L L T D ++
Sbjct: 135 RDADLAQLAPL-TKLKVLGLDDTDASAGGLE----HLQNAHDLKELYLFNTPTVDEELAV 189
Query: 162 MSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLSLTALQN--------LNHLERLNL 209
++ P+L + + +D+ G + ++G+ DL +S T + + L L LNL
Sbjct: 190 LTKFPALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAAEIAKLPKLTDLNL 249
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 269
+T+V+DA+L L+ L L+L LTD +L L+++ L L + +T++G+
Sbjct: 250 WKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILE 309
Query: 270 FKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 306
+SL+ L + +T+D F + P I + H
Sbjct: 310 LAKSKSLETL-IVTRTKVTDDGAAAFAAIAPNITLQH 345
>gi|332668444|ref|YP_004451232.1| Miro domain-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337258|gb|AEE54359.1| Miro domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1058
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 54/263 (20%)
Query: 5 LSFLNLAWTGVTKL---PNISSLECLNLSNCTIDSILEGNENKAPLAKIS-----LAGTT 56
L+ L+L+ T V+ L + +L LN+SN + + +PLA++ A T
Sbjct: 62 LTTLDLSSTPVSNLRPLAQLRNLTQLNISNTHVKDL-------SPLAQLYNLTELFASET 114
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+++ + L+ LDVSNS +S L Q+ L LD+S+S GD S
Sbjct: 115 KVSDLSPLAQLHN--LTTLDVSNSGVSDLSPLAQLHDLTTLDVSNS--GDLS-------- 162
Query: 117 ANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ R L N+ F V L+ L NL LS S T + D ++ +S + +L + I
Sbjct: 163 -DTRWL-FGNSTFYRTDVSDLSPLTQLHNLTWLSFSKTPVSD--LTPLSQLHNLTQLFIY 218
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
NT LV L L+ L++L+RL++ T VSD L P+S + L L +
Sbjct: 219 NT--------------LVSDLRPLEQLHNLDRLDVSNTTVSD--LSPVSQLQNLTKLYVY 262
Query: 235 NASLTDVSLHQLSSLSKLTNLSI 257
N +++D LS L KL NL+I
Sbjct: 263 NTAVSD-----LSPLEKLYNLNI 280
>gi|423481309|ref|ZP_17457999.1| hypothetical protein IEQ_01087 [Bacillus cereus BAG6X1-2]
gi|401146069|gb|EJQ53589.1| hypothetical protein IEQ_01087 [Bacillus cereus BAG6X1-2]
Length = 761
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVTN-AKIKDPSFFT---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I+ + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--ITPLYTLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + LN L+ L + + ++ D T PLS +L L+L N L D++
Sbjct: 387 -----------DLSGIDQLNQLQELWIGKNEIKDVT--PLSKMTQLKVLNLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVTNAKIKDPSFFTNLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
+ L L ++D VLT
Sbjct: 368 TPLYTLPLKDLVLT 381
>gi|290971150|ref|XP_002668393.1| predicted protein [Naegleria gruberi]
gi|284081777|gb|EFC35649.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ Q+K L L++ I D+ VE +A + L +L +S S GV I++ L
Sbjct: 104 YIGQLKQLTSLEIQGMDIDDEHVESMAEL-KQLTSLYISGNYIGSEGVKIISESFNKLTK 162
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++S ID+ Y+S + L ++I+ D +G + LS L HL
Sbjct: 163 LNISANYIDNVGAKYISQLKQLTSLEIACND------SIGDAGIIYLS-----GLEHLTN 211
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++ + ++ + F++L L++ S+ D L +S L KL L I + ++ G
Sbjct: 212 LDISRIKIGSGGAQYIGKFEQLTCLNINTCSIDDEVLQSISQLKKLIVLHISENEISIEG 271
>gi|52144007|ref|YP_082821.1| internalin [Bacillus cereus E33L]
gi|51977476|gb|AAU19026.1| internalin [Bacillus cereus E33L]
Length = 772
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V ++A + L L
Sbjct: 285 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTVLAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ ++ + LE L + + ++ D T PLS +L L L N LTD++
Sbjct: 393 -----------DLSGIEQMKQLEELWIGKNEIKDIT--PLSKMTQLKELHLPNNELTDIT 439
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
>gi|242347124|gb|ACS92628.1| toll-like receptor 2 type 2 [Anas platyrhynchos]
Length = 783
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 29/261 (11%)
Query: 13 TGVTKLPNISSLE---CLNLSNCTIDSILEGNENKA----PLAKISLAGTTFINEREAFL 65
T + K+P + +E C L D ++ N++++ + K+S+ + +A L
Sbjct: 272 TILEKVPRLVEVEMKDCRLLGTGRWDLEIQANQSQSLRVLTIEKLSIEEFYLFTDLQAVL 331
Query: 66 YIETSLLSFLDVSNSSLSRF-CFLT-QMKALEHLDLSSSMIGDDSVEMVACVGAN--LRN 121
+ SL + + V N+ + C L+ Q+ +LE+LDLS++++GD S+E AC G L+
Sbjct: 332 DL-VSLFTKITVENTKVFLVPCRLSKQLLSLEYLDLSANLLGDQSLEHSACPGGWPLLKT 390
Query: 122 LNLSNTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMPS-LKFIDISNTDIK 179
LNLS S + + HL NL +L +S + I + P+ LK++++S T I
Sbjct: 391 LNLSQNSLSDFKMTAKSLSHLRNLILLDISQNNFGE--IPDVCEWPANLKYLNLSRTQIP 448
Query: 180 GFIQQVGAETDLV-LSLTALQNLN----HLERLNLEQTQVS---DATLFPLSTFKELIHL 231
+ + +++ +S L+ N L+ L L + Q+ DA P L+ L
Sbjct: 449 KLTACIPSTLEVLDISANNLKEFNLHLPFLKELYLAKNQLKALPDAASIP-----NLVAL 503
Query: 232 SLRNASLTDVSLHQLSSLSKL 252
S+R L S +L S K+
Sbjct: 504 SIRGNKLNSFSKEELESFKKM 524
>gi|392966822|ref|ZP_10332241.1| hypothetical protein BN8_03445 [Fibrisoma limi BUZ 3]
gi|387845886|emb|CCH54287.1| hypothetical protein BN8_03445 [Fibrisoma limi BUZ 3]
Length = 491
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 68 ETSLLS--FLDVSNSSLSRFCFLTQMKA-LEHLDLSSSMIGDDSVEMVACVGANLRNLNL 124
ET+ LS F++V + + L+++ L HL LS +GD+ + +A + +L L L
Sbjct: 344 ETNYLSANFINVKAYNRQQLTQLSKLGGQLMHLRLSGQPVGDEDLPELASM-TSLTRLAL 402
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+TR + AG+ L LPNLE L+L GT + D + ++ PSLK + + T
Sbjct: 403 DHTRLTDAGLRTLT-SLPNLEQLNLYGTAVSDEGLEVLARCPSLKVVYLWQTQ 454
>gi|46446910|ref|YP_008275.1| hypothetical protein pc1276 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400551|emb|CAF24000.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 667
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 37/278 (13%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
NL G+T L + +L LNL+ C KI+ AG + A +++
Sbjct: 370 NLTDAGLTHLRPLVALTHLNLAKCH---------------KITDAGLAHLTSLVALQHLD 414
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSN 126
S ++++ L+ LT + AL+HLDLS S ++ + + V NLN S
Sbjct: 415 LSYCE--KLTDAGLAH---LTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLN-SC 468
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
+F+ AG+ L L L+ L LS + + D +++++ + +L+ +D+S +
Sbjct: 469 YKFTDAGLAHLTS-LVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSH-----HFT 522
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLH 244
A + SL ALQ+L+ NL +DA L L++ L HL L + LTD L
Sbjct: 523 NAGLAHLTSLVALQHLDLSCCRNL-----TDAGLAHLTSLVALQHLDLSSCKKLTDAGLE 577
Query: 245 QLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 281
L+ L L +L + LT++GL P +L+ LDL
Sbjct: 578 HLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDL 615
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 88 LTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLE 145
LT + AL+HLDLS + D + + + A L +LNL+ + + AG+ L L L+
Sbjct: 354 LTSLVALQHLDLSCCRNLTDAGLTHLRPLVA-LTHLNLAKCHKITDAGLAHLTS-LVALQ 411
Query: 146 ILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
L LS + + D +++++ + +L+ +D+S + A + SL ALQ+LN
Sbjct: 412 HLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSH-----HFTNAGLAHLTSLVALQHLN-- 464
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSL---RNASLTDVSLHQLSSLSKLTNLSI-RDA 260
LN + +DA L L++ L HL L RN LTD L L+ L L +L +
Sbjct: 465 --LN-SCYKFTDAGLAHLTSLVALQHLDLSCCRN--LTDAGLAHLAPLVALQHLDLSYSH 519
Query: 261 VLTNSGLGSFKPPRSLKLLDL 281
TN+GL +L+ LDL
Sbjct: 520 HFTNAGLAHLTSLVALQHLDL 540
>gi|290995863|ref|XP_002680502.1| predicted protein [Naegleria gruberi]
gi|284094123|gb|EFC47758.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 56 TFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVA 113
T++++REA + E + L+ L+VSNS + + +M L L++ ++ IG + + V+
Sbjct: 135 TYVHDREAKIISEMTQLTSLNVSNSIRIKKSIAYFREMNNLTCLNIGNNGIGVECAKHVS 194
Query: 114 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
+ L L++ G ++ L L L +S I + Y+S + L +DI
Sbjct: 195 EM-KQLTILHICGNGIKFEGAKFIS-ELQQLTKLDVSSNNIGEQGAKYISQLKQLTNLDI 252
Query: 174 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
+ ++GA+ + + L RLN+ ++ +S K+LI+L++
Sbjct: 253 -------YSNRIGAQ-----GAKHISEMKQLTRLNISYNDINVEGAKYISEMKQLINLNI 300
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
++ D +S +++LTNL I + ++N+G
Sbjct: 301 TKNNIGDEGARHISGMNQLTNLFIGNNNISNAGF 334
>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
Length = 555
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 30/294 (10%)
Query: 3 PRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTT 56
P L+ LN+A G+ L + LE L++S I S ++ + A L ++++
Sbjct: 203 PTLTTLNVASNGIGDAGAQALAANTRLESLDISFNEIGSDGVQALADNATLKTLNISSND 262
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFC-----FLTQMKALEHLDLSSSMIGDDSVEM 111
+ L + T+L N+S +R L +L LD+S + GD V+
Sbjct: 263 IGDAGALALAVNTTLTEL----NTSCNRISDAGAQALANSDSLTSLDISDNGFGDAGVQA 318
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
+A LR L++S R S AGV +A + L L ++ +I ++ L +
Sbjct: 319 IA-ANTRLRRLDISRNRLSEAGVLAVAAN-TTLTKLCIADCEIGTAGAQALAANTRLVSL 376
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
D + I G E L+ A L++LNLE+ + DA + L L
Sbjct: 377 DAGHNGI-------GTEGAQALARHAT-----LKQLNLEKNPIGDAGAVAFADNATLRSL 424
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL-HGG 284
+L+ +TD L L++ + L L++ D +T G + +L LD+ H G
Sbjct: 425 NLKGCKVTDSGLRVLATNATLRTLNVSDNRITAEGAKATAANSTLTSLDVSHNG 478
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 27/269 (10%)
Query: 22 SSLECLNLSNCTIDSILEG--NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 79
+SL+ L+LS C G + ++ PLA++++ +I + A L L+ L+V++
Sbjct: 154 ASLKALDLSRCGRQITAAGIAHLSELPLAELNVR-NNWIGDEGARLLAAHPTLTTLNVAS 212
Query: 80 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 137
+ + L LE LD+S + IG D V+ +A A L+ LN+S+ AG L
Sbjct: 213 NGIGDAGAQALAANTRLESLDISFNEIGSDGVQALA-DNATLKTLNISSNDIGDAGALAL 271
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----IQQVGAETDLVL 193
A + L L+ S +I D ++ SL +DIS+ GF +Q + A T
Sbjct: 272 AVN-TTLTELNTSCNRISDAGAQALANSDSLTSLDISD---NGFGDAGVQAIAANT---- 323
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
L RL++ + ++S+A + ++ L L + + + L++ ++L
Sbjct: 324 ---------RLRRLDISRNRLSEAGVLAVAANTTLTKLCIADCEIGTAGAQALAANTRLV 374
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+L + G + +LK L+L
Sbjct: 375 SLDAGHNGIGTEGAQALARHATLKQLNLE 403
>gi|431930507|ref|YP_007243553.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
gi|431828810|gb|AGA89923.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
Length = 1283
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 46/286 (16%)
Query: 4 RLSFLNLAWTGVTKLPN----ISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTF 57
R LNL G+T+LP+ + LE L L D++ +N L +I+
Sbjct: 26 RTGHLNLGNLGLTRLPDALRELDFLEELTLGGVIAWGDNVYR-RQNDGSLEQIN--EDCH 82
Query: 58 INEREAFLYIE-TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-------DSV 109
N+ +A + L LD S + LS FL + AL++L SS+ + D ++
Sbjct: 83 PNQLDAISTLGFLPCLRRLDCSGAKLSNLGFLAGLTALQYLKCSSTQVADLTPLAGLTNL 142
Query: 110 EMVAC-----------VG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 157
+ + C G NLR+L+ + T AG+ LA L L+ L T++ D
Sbjct: 143 QALDCGCTPVTDLTPLAGLTNLRSLDCAYT--PVAGLEPLA-DLTTLKSLDCRHTRVADL 199
Query: 158 AISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNL 209
A ++ + L+F+D +T + +Q + V+ LT L L +L+ L+
Sbjct: 200 AP--LAGLTELQFLDCGDTRVADLEPVASLANLQSLDCGGTRVVDLTPLAGLANLQALDC 257
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
TQV+D L PL++ L L R+A +TD L L+SL L +L
Sbjct: 258 GFTQVAD--LAPLASLTNLQSLDCRSAPVTD--LGPLASLGNLQSL 299
>gi|32477504|ref|NP_870498.1| adenylate cyclase regulatory protein [Rhodopirellula baltica SH 1]
gi|32448058|emb|CAD77575.1| conserved hypothetical protein-putative adenylate cyclase
regulatory protein [Rhodopirellula baltica SH 1]
Length = 513
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 40/282 (14%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L L L TGVT L +S L ++L N I G+ LAKI T I+
Sbjct: 216 LDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNI-----GDAGMDSLAKIK----TLID 266
Query: 60 ER-EAFLYIETSLLSFLDVSNSSLS-RFC---------FLTQMKALEHLDLSSSMIGDDS 108
+ E + L+ + S++ +C L Q LE+L S I D+S
Sbjct: 267 VKLEKSKVTDEGLVKLAPLPLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDES 326
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
+ + + + L+ L + + G+ +AG+ L L + +DD + +S +P++
Sbjct: 327 MAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDGLKVISQLPAV 384
Query: 169 KFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVS 215
+DIS + I Q+G T L +L +L +LE LNL+ T V+
Sbjct: 385 THVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVT 444
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
D +L L +L L++ L D S +L+ L L ++++
Sbjct: 445 DESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 486
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+PN + +G IDD + + + +LK + +++T I TD +L +
Sbjct: 165 IPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAI----------TDQ--TLKTVGE 212
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ L+ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 213 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKS 272
Query: 261 VLTNSGLGSFKP 272
+T+ GL P
Sbjct: 273 KVTDEGLVKLAP 284
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L++L +L+RL L T ++D TL + L L LR +TD L L+ LSKL + +
Sbjct: 186 LKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL 245
Query: 258 RDAVLTNSGLGSFKPPRSL 276
R+ + ++G+ S ++L
Sbjct: 246 RNTNIGDAGMDSLAKIKTL 264
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 15 VTKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
+ +L +S L+ L + C + + I NKA LA+ L ++ +++ + + +
Sbjct: 327 MAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKA-LARFELRDSS-VDDDGLKVISQLPAV 384
Query: 73 SFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNT 127
+ +D+S L+ L ++ L +L L + D E +A G NL LNL +T
Sbjct: 385 THVDISECRLASPEGIAQLGKLTGLTYLGLWETKTND---ETLAGFGDLVNLEELNLKST 441
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
+ + +L + L+ L+++GTQ+ D + ++ +P+LK ++++NT I GF
Sbjct: 442 AVTDESLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI-GF 493
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 37/190 (19%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
ANL+ L L++T + + + G + +L+ L L T + D + ++ + L+ ID+ NT
Sbjct: 190 ANLKRLTLADTAITDQTLKTV-GEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNT 248
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS------------- 223
+I + +L + L + LE+++V+D L L+
Sbjct: 249 NIGD------------AGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLPLKSINFNYCT 296
Query: 224 -----TFKELIHL-SLRN-----ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
T K L +L N + + D S+ +L LSKL L IR +T G+
Sbjct: 297 TINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAG 356
Query: 273 PRSLKLLDLH 282
++L +L
Sbjct: 357 NKALARFELR 366
>gi|229120202|ref|ZP_04249453.1| hypothetical protein bcere0016_5180 [Bacillus cereus 95/8201]
gi|228663243|gb|EEL18832.1| hypothetical protein bcere0016_5180 [Bacillus cereus 95/8201]
Length = 1019
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 247 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 306
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 307 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 361
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
L G L NL+ +S + + + +++ M L + +S ++ +
Sbjct: 362 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKLIELGLSKNEL--------------V 404
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 405 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 450
>gi|146095030|ref|XP_001467457.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071822|emb|CAM70515.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 811
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 136/292 (46%), Gaps = 43/292 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGT-----TFINEREAFLY 66
T V L L + LSN +DS ++G + L ++ L+ T F+ + ++ +Y
Sbjct: 343 TNVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNFLGQSQSLIY 402
Query: 67 IETS----------------LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 110
+ + L L ++N+++ FL + +L+ L L S+++ +E
Sbjct: 403 LNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLE 462
Query: 111 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
+ L++L+L++TR +S H NL L L G+ +D I+ + +P L+
Sbjct: 463 GFGRL-QTLQDLSLAHTRVTSV---TELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRI 518
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELI 229
+ +S TD+ A +L+L + LE+L ++ + V++ + F ++ L
Sbjct: 519 LLLSKTDV--------ASLELILKSES------LEQLEVKFSHVNEKSAFFGVTKASALT 564
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++L + ++D+ + L +L L++ + +T+ G+ RSL+ +DL
Sbjct: 565 DVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDL 614
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L ++ L LD+++ D + C LR+++LS A V LA LP +E L
Sbjct: 279 LASLQKLRRLDMTNCKGDFDCAGIARC--CFLRSVHLSGCNVKDADVPHLA-QLPCVEEL 335
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 203
LS T+I + + ++ L+ I +SN + +Q + T L LS T + ++N
Sbjct: 336 LLSRTRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNF 393
Query: 204 LER------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L + LNL +T V+ + LS L HL L N ++ DVS L+ L LS+
Sbjct: 394 LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSLKTLSL 451
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDL 281
+ ++ ++GL F ++L+ L L
Sbjct: 452 QSTLVDSAGLEGFGRLQTLQDLSL 475
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 37/190 (19%)
Query: 88 LTQMKALEHLDLSSSMIGD-----------------DSVEMVACVGA--NLRNLNLSNTR 128
L + ++L+ +DL+ + + D SV + +GA LR L+++ T
Sbjct: 603 LCEARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETP 662
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
SS + L+ +LEIL+LS T +DD + + SL+ + +S T I Q
Sbjct: 663 VSS--IRSLSA-CQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQ----- 714
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L +HLE L+ + V+ L L L+ L+L L + +L++
Sbjct: 715 ---------LGQCSHLEELHAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTN 764
Query: 249 LSKLTNLSIR 258
KL L+++
Sbjct: 765 CRKLLKLNVK 774
>gi|290977929|ref|XP_002671689.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284085260|gb|EFC38945.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 434
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 72 LSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA------------ 117
L++L++ N+ + S F+ ++ +L L + S+ I +S ++V C+
Sbjct: 169 LTYLNIGNNKIMDSGMKFIGKLSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSNPVT 228
Query: 118 -----------NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
L++LN+SNT S G+ L+ L L LSL+ I + + +S M
Sbjct: 229 IEDAKSISSIHGLKSLNISNTGISVEGLKYLSA-LTLLTNLSLAKNNITNEGLLSISQMK 287
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
+ K F+Q + D L+ + NL LN+ QT+++ + +++ K
Sbjct: 288 QIT---------KLFLQHNVIDCDGAQLLSTMTNL---RLLNISQTKITTEGIKHITSLK 335
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+ L++ L D +L +SS+++LTNLS + LT+ G
Sbjct: 336 NITSLNISINQLNDEALKLVSSMNQLTNLSTHNNKLTSEG 375
>gi|398020181|ref|XP_003863254.1| hypothetical protein, unknown function [Leishmania donovani]
gi|322501486|emb|CBZ36565.1| hypothetical protein, unknown function [Leishmania donovani]
Length = 811
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 136/292 (46%), Gaps = 43/292 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGT-----TFINEREAFLY 66
T V L L + LSN +DS ++G + L ++ L+ T F+ + ++ +Y
Sbjct: 343 TNVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNFLGQSQSLIY 402
Query: 67 IETS----------------LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 110
+ + L L ++N+++ FL + +L+ L L S+++ +E
Sbjct: 403 LNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLE 462
Query: 111 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
+ L++L+L++TR +S H NL L L G+ +D I+ + +P L+
Sbjct: 463 GFGRL-QTLQDLSLAHTRVTSV---TELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRI 518
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELI 229
+ +S TD+ A +L+L + LE+L ++ + V++ + F ++ L
Sbjct: 519 LLLSKTDV--------ASLELILKSES------LEQLEVKFSHVNEKSAFFGVTKASALT 564
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++L + ++D+ + L +L L++ + +T+ G+ RSL+ +DL
Sbjct: 565 DVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDL 614
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L ++ L LD+++ D + C LR+++LS A V LA LP +E L
Sbjct: 279 LASLQKLRRLDMTNCKGDFDCAGIARC--CFLRSVHLSGCNVKDADVPHLA-QLPCVEEL 335
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 203
LS T+I + + ++ L+ I +SN + +Q + T L LS T + ++N
Sbjct: 336 LLSRTRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNF 393
Query: 204 LER------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L + LNL +T V+ + LS L HL L N ++ DVS L+ L LS+
Sbjct: 394 LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSLKTLSL 451
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDL 281
+ ++ ++GL F ++L+ L L
Sbjct: 452 QSTLVDSAGLEGFGRLQTLQDLSL 475
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 37/190 (19%)
Query: 88 LTQMKALEHLDLSSSMIGD-----------------DSVEMVACVGA--NLRNLNLSNTR 128
L + ++L+ +DL+ + + D SV + +GA LR L+++ T
Sbjct: 603 LCEARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETP 662
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
SS + L+ +LEIL+LS T +DD + + SL+ + +S T I Q
Sbjct: 663 VSS--IRSLSA-CQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQ----- 714
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L +HLE L+ + V+ L L L+ L+L L + +L++
Sbjct: 715 ---------LGQCSHLEELHAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTN 764
Query: 249 LSKLTNLSIR 258
KL L+++
Sbjct: 765 CRKLLKLNVK 774
>gi|390341015|ref|XP_003725354.1| PREDICTED: protein slit-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 1012
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 28/291 (9%)
Query: 5 LSFLNLAWTGVTKLPNIS-----SLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFI 58
L FL+L+ +T L +++ +L L+LS+ +++ I++ N A L K++L G
Sbjct: 318 LEFLDLSGNSLTSLNSLAFQGANALRTLDLSSNSVNEIMDDVFTNLANLTKLNLKGNMLP 377
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVG 116
N A + + LS+L ++++++SR L + LE LDLS + + ++ A G
Sbjct: 378 NI-TADTFGDIPSLSYLTLTDNNISRISSNSLAGLVGLEFLDLSGNSL--RHLQAGALQG 434
Query: 117 -ANLRNLNLSNTRFSSAGVGILA----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A L LNL++ + L + L L+L G Q+ + PSL+ +
Sbjct: 435 LAALMELNLADNKLYIVEPEALKTTQFSFMSQLTWLNLQGNQLIELQRGVFRGAPSLRVL 494
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+S I L + A N L RL + + + L L
Sbjct: 495 TLSRNKI------------LRIVPDAFSGFNRLHRLMMSDNNLRRLPDGIFRLLRTLEML 542
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
LRN SLT++S L+ L+NL++ + LTN + K R ++ L+L+
Sbjct: 543 DLRNNSLTEISDKAFQGLTALSNLNLAENKLTNDKMKWLKNIRPVQTLNLN 593
>gi|423420629|ref|ZP_17397718.1| hypothetical protein IE3_04101 [Bacillus cereus BAG3X2-1]
gi|401101196|gb|EJQ09187.1| hypothetical protein IE3_04101 [Bacillus cereus BAG3X2-1]
Length = 779
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 245 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 297
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 298 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 354
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 355 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 405
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 406 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 452
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 453 PLSNLVNLQKL 463
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 263 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 317
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L G + N++ L LSG QI+D
Sbjct: 318 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 341
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 342 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 386
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 387 KPLYSLPLKDLVLT 400
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 12 WTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIET 69
++ VT L + +LE L+LSN I ++ L G +N + + L+G I + A +E
Sbjct: 295 FSDVTPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ 350
Query: 70 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 351 --LDYLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK- 403
Query: 130 SSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------ 181
V L+G + L L + QI+D ++ ++ M L +D+ N ++K
Sbjct: 404 ----VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNL 457
Query: 182 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
+Q++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 458 VNLQKLDLEANYISDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 514
>gi|393905335|gb|EJD73939.1| hypothetical protein LOAG_18676 [Loa loa]
Length = 509
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYA-ISYMSMMPSLKFIDIS 174
LR +NL + V LA P LE L LS TQI D A IS + LK +++S
Sbjct: 295 CQLRTVNLLGCFITDDTVANLAAGCPKLEYLCLSSCTQITDRALISLANGCHRLKDLELS 354
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV-SDATLFPLST-FKELIHLS 232
+ TD + A +N + LER++LE + +D TL S L++LS
Sbjct: 355 GCSLL---------TDHGFGILA-KNCHELERMDLEDCSLLTDITLDNFSKGCPCLLNLS 404
Query: 233 LRNASL-TDVSLHQLSSLSKLTNLSIRDAV----------LTNSGLGSFKPPRSLKLLDL 281
L + L TD L QL N ++D + +T+ L + R+L+ +DL
Sbjct: 405 LSHCELITDAGLRQLC-----LNYHLKDRIQVLELDNCPQITDISLDYMRQVRTLQRVDL 459
Query: 282 HGGWLLTEDAILQFCKMHPRIEV 304
+ +T+DAI +F P +EV
Sbjct: 460 YDCQNITKDAIKRFKNFKPDVEV 482
>gi|390341017|ref|XP_003725355.1| PREDICTED: protein slit-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 1012
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 28/291 (9%)
Query: 5 LSFLNLAWTGVTKLPNIS-----SLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFI 58
L FL+L+ +T L +++ +L L+LS+ +++ I++ N A L K++L G
Sbjct: 318 LEFLDLSGNSLTSLNSLAFQGANALRTLDLSSNSVNEIMDDVFTNLANLTKLNLKGNMLP 377
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVG 116
N A + + LS+L ++++++SR L + LE LDLS + + ++ A G
Sbjct: 378 NI-TADTFGDIPSLSYLTLTDNNISRISSNSLAGLVGLEFLDLSGNSL--RHLQAGALQG 434
Query: 117 -ANLRNLNLSNTRFSSAGVGILA----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A L LNL++ + L + L L+L G Q+ + PSL+ +
Sbjct: 435 LAALMELNLADNKLYIVEPEALKTTQFSFMSQLTWLNLQGNQLIELQRGVFRGAPSLRVL 494
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+S I L + A N L RL + + + L L
Sbjct: 495 TLSRNKI------------LRIVPDAFSGFNRLHRLMMSDNNLRRLPDGIFRLLRTLEML 542
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
LRN SLT++S L+ L+NL++ + LTN + K R ++ L+L+
Sbjct: 543 DLRNNSLTEISDKAFQGLTALSNLNLAENKLTNDKMKWLKNIRPVQTLNLN 593
>gi|84043372|ref|XP_951476.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348176|gb|AAQ15503.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359981|gb|AAX80405.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1393
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
+ V L NI +LE L+L CT ID+ + N L + L+GT NE L + ++
Sbjct: 475 SNVEALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLSGTNTDNESLRSLCLSQTM 534
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+S L++S+ C+ +M + H+ S+E L LNLSN +
Sbjct: 535 VS-LNLSH------CW--KMTNVSHIS---------SLEA-------LNELNLSNCIRIN 569
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL---------KFIDISNTDIKGFI 182
AG L L L + LS T I D ISY S +L K +D++ +
Sbjct: 570 AGWEALE-KLQQLHVAILSNTHITDRGISYFSKCKNLVTLDLSFCNKLLDVTTLSNITTL 628
Query: 183 QQVGAET--DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLT 239
+++ ++ ++ L+ L L L LN++ Q+ D+ + L K L+ LSL N
Sbjct: 629 EELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIGSLGNGKSLVRLSLENCKGFG 688
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
DV+ LS+L L L++ SG+G+ L++LDL
Sbjct: 689 DVT--PLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDL 728
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 22/236 (9%)
Query: 71 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+L+ +V SSL F + K+L L++ S + G +VE +A + L L+L
Sbjct: 441 VLNIKEVHISSLD-FTGIGASKSLLQLNMES-ITGLSNVEALANI-LTLEKLSLHGCTDI 497
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVG 186
AG+G L G+LP L++L LSGT D+ ++ + + ++ +++S+ T++ I +
Sbjct: 498 DAGIGCL-GNLPQLKVLDLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMTNV-SHISSLE 555
Query: 187 AETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS- 237
A +L LS AL+ L L L T ++D + S K L+ L L +
Sbjct: 556 ALNELNLSNCIRINAGWEALEKLQQLHVAILSNTHITDRGISYFSKCKNLVTLDLSFCNK 615
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
L DV+ LS+++ L L++ GL L +L++ G L ED+++
Sbjct: 616 LLDVT--TLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQL--EDSVI 667
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 67/295 (22%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCT-------------------------IDSILE 39
LSF N VT L NI++LE LNL +C+ DS++
Sbjct: 610 LSFCN-KLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIG 668
Query: 40 GNENKAPLAKISL---AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 96
N L ++SL G + + +E L + D S + L Q++ L
Sbjct: 669 SLGNGKSLVRLSLENCKGFGDVTPLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVL-- 726
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA------------------ 138
DL + + D+S+E + L +LN S+ + ++ I +
Sbjct: 727 -DLGRTQVDDNSLENICTSSIPLVSLNFSHCKKITSISAIASLTALEELNIDNCCNVTSG 785
Query: 139 ----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
G L L + +LS T+I+D I ++S SL ++++ F + + TD+
Sbjct: 786 WNVFGTLHQLRVATLSNTRINDEKIRHVSECKSLNTLNLA------FCKDI---TDV--- 833
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
TAL + LE LNL+ + L T + LS++ + D Q S L
Sbjct: 834 -TALSKITMLEELNLDCCPNIRKGIETLGTLPKARILSMKECYMGDGYAQQCSIL 887
>gi|218901747|ref|YP_002449581.1| internalin protein [Bacillus cereus AH820]
gi|218535468|gb|ACK87866.1| internalin protein [Bacillus cereus AH820]
Length = 1012
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 292
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 390
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 391 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 436
>gi|290971190|ref|XP_002668408.1| predicted protein [Naegleria gruberi]
gi|284081802|gb|EFC35664.1| predicted protein [Naegleria gruberi]
Length = 286
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S R F+++MK L LD+S ++IG + + ++ + L +LN+ + S G ++
Sbjct: 122 SRERVKFISEMKQLTSLDISHNLIGYEGAKYISEM-KQLTSLNIYYNQISDKGAKYIS-E 179
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+ L +L++ +I D Y+S M L +++SN +I+ GA+ +
Sbjct: 180 MKQLILLNIGSNRIGDEGAKYISEMKQLTSLNVSNNEIR----DEGAK--------FISE 227
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ L LN+ + ++S +S K+LI L++ + ++D +S + +LT+L
Sbjct: 228 MKQLTSLNVYKNRISVEGAKYISEMKQLILLNIGSNRISDEGAKYISEMKQLTSL 282
>gi|49481764|ref|YP_034811.1| internalin protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49333320|gb|AAT63966.1| possible internalin protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 954
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 247 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 306
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 307 SLRNNKISNLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 361
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 362 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 404
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 405 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 450
>gi|196034771|ref|ZP_03102179.1| internalin protein [Bacillus cereus W]
gi|195992814|gb|EDX56774.1| internalin protein [Bacillus cereus W]
Length = 984
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 292
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
L G L NL+ +S + + + +++ M L + +S ++ +
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKLIELGLSKNEL--------------V 390
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 391 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 436
>gi|423460691|ref|ZP_17437488.1| hypothetical protein IEI_03831 [Bacillus cereus BAG5X2-1]
gi|401140744|gb|EJQ48300.1| hypothetical protein IEI_03831 [Bacillus cereus BAG5X2-1]
Length = 495
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 187 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 239
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 240 VTPLVKMDNLASLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 296
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 297 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 345
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 346 ---------VKDLSGIDQMKQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 394
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 395 PLSNLVNLQKL 405
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 205 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLASLDLSNNKI 259
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 260 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 283
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 284 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 328
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 329 KPLYSLPLKDLVLTRNKV 346
>gi|148235993|ref|NP_001082850.1| leucine rich repeat and Ig domain containing 4b precursor [Danio
rerio]
Length = 604
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ + LE LDLS ++I VE + NLR L + N R VG+ +G L NL L
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKILPVGVFSG-LSNLRRL 135
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLER 206
+S +I L F+D + D+ Q E DLV +S A L L+
Sbjct: 136 DISENEI-------------LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKE 182
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV------SLHQLSSL----------- 249
LN++++ ++ LS + L L LR +++ + LHQL +L
Sbjct: 183 LNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEML 242
Query: 250 --SKLTNLSIRDAVLTNSGLGS--FKPPRSLKLL 279
+ L L++ VLTN L + + P R L L
Sbjct: 243 NSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYL 276
>gi|213627601|gb|AAI71652.1| Hypothetical LOC559074 [Danio rerio]
Length = 604
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ + LE LDLS ++I VE + NLR L + N R VG+ +G L NL L
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKILPVGVFSG-LSNLRRL 135
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLER 206
+S +I L F+D + D+ Q E DLV +S A L L+
Sbjct: 136 DISENEI-------------LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKE 182
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV------SLHQLSSL----------- 249
LN++++ ++ LS + L L LR +++ + LHQL +L
Sbjct: 183 LNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEML 242
Query: 250 --SKLTNLSIRDAVLTNSGLGS--FKPPRSLKLL 279
+ L L++ VLTN L + + P R L L
Sbjct: 243 NSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYL 276
>gi|312092167|ref|XP_003147243.1| hypothetical protein LOAG_11677 [Loa loa]
Length = 358
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYA-ISYMSMMPSLKFIDIS 174
LR +NL + V LA P LE L LS TQI D A IS + LK +++S
Sbjct: 144 CQLRTVNLLGCFITDDTVANLAAGCPKLEYLCLSSCTQITDRALISLANGCHRLKDLELS 203
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV-SDATLFPLST-FKELIHLS 232
+ TD + A +N + LER++LE + +D TL S L++LS
Sbjct: 204 GCSLL---------TDHGFGILA-KNCHELERMDLEDCSLLTDITLDNFSKGCPCLLNLS 253
Query: 233 LRNASL-TDVSLHQLSSLSKLTNLSIRDAV----------LTNSGLGSFKPPRSLKLLDL 281
L + L TD L QL N ++D + +T+ L + R+L+ +DL
Sbjct: 254 LSHCELITDAGLRQLC-----LNYHLKDRIQVLELDNCPQITDISLDYMRQVRTLQRVDL 308
Query: 282 HGGWLLTEDAILQFCKMHPRIEV 304
+ +T+DAI +F P +EV
Sbjct: 309 YDCQNITKDAIKRFKNFKPDVEV 331
>gi|46447588|ref|YP_008953.1| hypothetical protein pc1954 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401229|emb|CAF24678.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 704
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 41/300 (13%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLA-----------KISLAGTTFINE 60
G+ L +++ L+ LNLS C D+ G + PL ++ G +
Sbjct: 261 GLAYLTSLTGLQHLNLSGCYHLTDT---GLAHLTPLTGLQHLDLRICEYLTATGLAHLKP 317
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+A +++ S +++N LS LT AL+HLDLS D+ + L+
Sbjct: 318 LKALQHLDLSYCK--NLTNVGLSHLAPLT---ALQHLDLSYCWQLADAGLVYLTPLTGLQ 372
Query: 121 NLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT-- 176
+L+LS + + AG+ L L L+ L LS + + D ++++ + +L+ +++ N
Sbjct: 373 HLDLSGYHKLTDAGLAHLTP-LTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCRN 431
Query: 177 ---DIKGFIQQVGAETDLVLS---------LTALQNLNHLERLNLEQTQ-VSDATLFPLS 223
D + + A L LS L L L L+RL+L + ++D L L
Sbjct: 432 LTDDGLAHLAPLTALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLI 491
Query: 224 TFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 281
K L HL+LRN +LTD L L+ L+ L +L + D LT++GL P +L+ LDL
Sbjct: 492 PLKALQHLNLRNCRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDL 551
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRFSSA-GVGILAGHLPN 143
+LT + L+HL+LS D+ + G L++L+L + +A G+ L L
Sbjct: 264 YLTSLTGLQHLNLSGCYHLTDTGLAHLTPLTG--LQHLDLRICEYLTATGLAHLKP-LKA 320
Query: 144 LEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 202
L+ L LS + + + +S+++ + +L+ +D+S + Q+ A+ LV LT L L
Sbjct: 321 LQHLDLSYCKNLTNVGLSHLAPLTALQHLDLS------YCWQL-ADAGLV-YLTPLTGLQ 372
Query: 203 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV 261
HL+ + ++DA L L+ L L L +LTDV L L L L +L++R+
Sbjct: 373 HLDLSGYHK--LTDAGLAHLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCR 430
Query: 262 -LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
LT+ GL P +L+ LDL W LT+ +
Sbjct: 431 NLTDDGLAHLAPLTALQHLDLSYCWQLTDAGL 462
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 34/303 (11%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-REAFLYI 67
NL G+ L + +L+ LNL NC + +G + APL + ++ + +A L
Sbjct: 406 NLTDVGLAHLMPLKALQHLNLRNCR-NLTDDGLAHLAPLTALQHLDLSYCWQLTDAGLAH 464
Query: 68 ETSL--LSFLDVS---NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRN 121
T L L LD+S N + L +KAL+HL+L + + DD + +A + A L++
Sbjct: 465 LTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHLNLRNCRNLTDDGLVHLAPLTA-LQH 523
Query: 122 LNLSNT-RFSSAGVGILA-----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 175
L+LS+ + AG+ L HL ++L+G +++++ + L+++D+S
Sbjct: 524 LDLSDCNNLTDAGLAHLTPLTALQHLDLKYCINLTGA-----GLAHLAFLTGLQYLDLSW 578
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSL- 233
K I L L+ L L+ L L + ++D L L + L HL+L
Sbjct: 579 --CKNLIDA---------GLVHLKLLTALQYLGLSYCENLTDDGLAHLRSLTALQHLALI 627
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+LTD L L SL+ L +L +R LT GL + +L+ L L LT+D +
Sbjct: 628 HYKNLTDAGLVHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTALQYLALTQYKNLTDDGL 687
Query: 293 LQF 295
+F
Sbjct: 688 ARF 690
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 28/262 (10%)
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM------VACV 115
E F E SL+ ++ N +R C L +K + S ++ + +V++ +
Sbjct: 136 EPFNSTEKSLIELKELLN--FARQCRLNMLKNYLEFTVVSELL-NQAVQLAEFERIIIPF 192
Query: 116 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 174
+ LN SN + + + + NL++L L+ Q I D +++++ + L+ +DI
Sbjct: 193 SKEIEALNFSNNDYLTDAHLLTLRNCENLKVLHLNACQAITDDGLAHLTPLTGLQHLDIR 252
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSL 233
+ ++ G L L +L L+ LNL ++D L L+ L HL L
Sbjct: 253 ---VCEYLTDDG--------LAYLTSLTGLQHLNLSGCYHLTDTGLAHLTPLTGLQHLDL 301
Query: 234 RNAS-LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
R LT L L L L +L + LTN GL P +L+ LDL W L +
Sbjct: 302 RICEYLTATGLAHLKPLKALQHLDLSYCKNLTNVGLSHLAPLTALQHLDLSYCWQLADAG 361
Query: 292 ILQFCKM----HPRIEVWHELS 309
++ + H + +H+L+
Sbjct: 362 LVYLTPLTGLQHLDLSGYHKLT 383
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 64/269 (23%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
NL G+ L + +L+ LNL NC + +G + APL A +++
Sbjct: 481 NLTDVGLAHLIPLKALQHLNLRNCR-NLTDDGLVHLAPLT--------------ALQHLD 525
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
S D +N + + LT + AL+HLDL C+
Sbjct: 526 LS-----DCNNLTDAGLAHLTPLTALQHLDLKY------------CIN------------ 556
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS---NTDIKGFIQQ 184
+ AG+ LA L L+ L LS + + D + ++ ++ +L+++ +S N G
Sbjct: 557 LTGAGLAHLA-FLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENLTDDGLAH- 614
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSL 243
+ SLTALQ+L + NL +DA L L + L HL LR +LT L
Sbjct: 615 -------LRSLTALQHLALIHYKNL-----TDAGLVHLRSLTSLQHLDLRYCQNLTGDGL 662
Query: 244 HQLSSLSKLTNLSIRDAV-LTNSGLGSFK 271
L +L+ L L++ LT+ GL FK
Sbjct: 663 AHLRTLTALQYLALTQYKNLTDDGLARFK 691
>gi|423392277|ref|ZP_17369503.1| hypothetical protein ICG_04125 [Bacillus cereus BAG1X1-3]
gi|401634924|gb|EJS52686.1| hypothetical protein ICG_04125 [Bacillus cereus BAG1X1-3]
Length = 760
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L G + N++ L LSG QI+D
Sbjct: 299 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423667107|ref|ZP_17642136.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|423676859|ref|ZP_17651798.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
gi|401304551|gb|EJS10103.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|401307120|gb|EJS12577.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
Length = 760
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L +++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKEIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|229022889|ref|ZP_04179409.1| Internalin [Bacillus cereus AH1272]
gi|228738424|gb|EEL88900.1| Internalin [Bacillus cereus AH1272]
Length = 760
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L G + N++ L LSG QI+D
Sbjct: 299 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 12 WTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIET 69
++ VT L + +LE L+LSN I ++ L G +N + + L+G I + A +E
Sbjct: 276 FSDVTPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ 331
Query: 70 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 332 --LDYLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK- 384
Query: 130 SSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------ 181
V L+G + L L + QI+D ++ ++ M L +D+ N ++K
Sbjct: 385 ----VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNL 438
Query: 182 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
+Q++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 439 VNLQKLDLEANYITDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 495
>gi|290980460|ref|XP_002672950.1| predicted protein [Naegleria gruberi]
gi|284086530|gb|EFC40206.1| predicted protein [Naegleria gruberi]
Length = 331
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L FL + + F+++MK L LD+S + I + ++++ + L +LN++
Sbjct: 112 LKFLGYLLGGIEKLKFISEMKQLISLDISYNRIDGEGAKLISEM-KQLTSLNINGNVIGG 170
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G ++G + L L + +I Y+S M L +DI Q+G E
Sbjct: 171 EGAKFISG-MKQLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGN-------QIGDE--- 219
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ + + L LN+ + DA + K+L L++ + D ++ + +
Sbjct: 220 --EVKLISEMKQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQ 277
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
LT+L+I + N+G + L LD+ G + E A
Sbjct: 278 LTSLNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGA 317
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++MK L L+++ ++IG + + ++ + L +L + N R G ++ + L L
Sbjct: 152 ISEMKQLTSLNINGNVIGGEGAKFISGM-KQLTSLYIYNNRIGGEGAKYIS-EMKQLISL 209
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN--- 200
+ G QI D + +S M L ++I+N I FI + T L +S + +
Sbjct: 210 DIGGNQIGDEEVKLISEMKQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVIGDEGA 269
Query: 201 -----LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ L LN+ + ++ +A +S K+L L + + +S + +L +L
Sbjct: 270 KYINEMKQLTSLNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGAKFISEMKQLISL 329
>gi|17548893|ref|NP_522233.1| GALA protein [Ralstonia solanacearum GMI1000]
Length = 981
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 144
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 44 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 100
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
E L+++G +I D ++ PSLK ++ ++ I ++ AE+ L
Sbjct: 101 ESLNVAGAEIGDGGARLLAANPSLKSLNAASGGISASGARMLAESPT------------L 148
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 261
E L+L Q + DA L+ + L HL++RN +TD+ L+ L +L + + V
Sbjct: 149 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDLGTRALALNPALVSLDLGNLVTET 208
Query: 262 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
+T G + RSLK L + G L +D + +
Sbjct: 209 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 259
>gi|241888800|ref|ZP_04776106.1| internalin A InlA [Gemella haemolysans ATCC 10379]
gi|241864476|gb|EER68852.1| internalin A InlA [Gemella haemolysans ATCC 10379]
Length = 1569
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDL 191
++P LE + S I D IS++ P+LK + + +IK ++ + + +
Sbjct: 907 NIPTLEGIDFSENDIQD--ISFLKDYPNLKLVSAAGNNIKNIDVLKNLTNLESLNLDNNK 964
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ ++ALQ+LNHL ++LE ++ L LS+ EL L L N S +++ + SL +
Sbjct: 965 IKDISALQDLNHLRAVSLENNNIT--KLDALSSKNELERLFLSNNSGLELATLKNDSLEQ 1022
Query: 252 LT--NLSIRD-AVLTN 264
LT N +IRD +V++N
Sbjct: 1023 LTVNNTNIRDLSVVSN 1038
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 36/155 (23%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIKG 180
+PN+E+L + T IDD S++ +P+L+ ID S DI+
Sbjct: 864 MPNIEVLGIGYTSIDDITPVYKFKKLKQLYVSRTGIKDYSFIKNIPTLEGIDFSENDIQD 923
Query: 181 F--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
++ V A + + ++ L+NL +LE LNL+ ++ D +S ++L H
Sbjct: 924 ISFLKDYPNLKLVSAAGNNIKNIDVLKNLTNLESLNLDNNKIKD-----ISALQDLNH-- 976
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
LR SL + ++ +L +LS L R + NSGL
Sbjct: 977 LRAVSLENNNITKLDALSSKNELE-RLFLSNNSGL 1010
>gi|46446522|ref|YP_007887.1| hypothetical protein pc0888 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400163|emb|CAF23612.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 653
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 88 LTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRF--SSAGVGILAGHLPNL 144
LT + AL+HL+LS + D + + + A L++LNLS + + AG+ L L L
Sbjct: 294 LTPLTALQHLNLSFCDKLTDAGLAHLTPLTA-LQHLNLSRCYYKLTDAGLAHLTP-LTAL 351
Query: 145 EILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 203
+ L+LS ++ D + ++ ++ L+ +D+ + F + GA + +LTALQ H
Sbjct: 352 QHLNLSFCDKLTDAGLVHLKLLTGLQHLDL-----REFWELTGAGLAHLTTLTALQ---H 403
Query: 204 LERLNLEQ-TQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAV 261
L+ ++ T V A L PL+T + HL L R +LT+ L L L+ L +L++ +
Sbjct: 404 LDLSGCDKLTDVGLAHLTPLTTLQ---HLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECY 460
Query: 262 -LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
LT++GL P +L+ LDL LT+D +
Sbjct: 461 HLTDAGLAHLTPLTALQHLDLSQCSKLTDDGL 492
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 50/291 (17%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+ L +++L+ L LS+C K++ AG + A ++ LS
Sbjct: 265 GLAHLTPLTALQHLELSDC---------------RKLTDAGLAHLTPLTALQHLN---LS 306
Query: 74 FLD-VSNSSLSRFCFLTQMKALEHLDLSSSM--IGDDSVEMVACVGANLRNLNLSNT-RF 129
F D ++++ L+ LT + AL+HL+LS + D + + + A L++LNLS +
Sbjct: 307 FCDKLTDAGLAH---LTPLTALQHLNLSRCYYKLTDAGLAHLTPLTA-LQHLNLSFCDKL 362
Query: 130 SSAGV---GILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+ AG+ +L G HL E L+G +++++ + +L+ +D+S D +
Sbjct: 363 TDAGLVHLKLLTGLQHLDLREFWELTGA-----GLAHLTTLTALQHLDLSGCDK---LTD 414
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVS 242
VG L L L L+ L+L++ + +++A L L L HL+L LTD
Sbjct: 415 VG--------LAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAG 466
Query: 243 LHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
L L+ L+ L +L + + LT+ GL P +L+ LDL LT+D +
Sbjct: 467 LAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQCSKLTDDGL 517
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 55/302 (18%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+ L +++L+ LNLS C K++ AG + A ++ S
Sbjct: 290 GLAHLTPLTALQHLNLSFCD---------------KLTDAGLAHLTPLTALQHLNLSR-C 333
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSA 132
+ ++++ L+ LT + AL+HL+LS D+ + + L++L+L + A
Sbjct: 334 YYKLTDAGLAH---LTPLTALQHLNLSFCDKLTDAGLVHLKLLTGLQHLDLREFWELTGA 390
Query: 133 GVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS---NTDIKGFIQQVGAE 188
G+ L L L+ L LSG ++ D +++++ + +L+ +D+ N G +
Sbjct: 391 GLAHLTT-LTALQHLDLSGCDKLTDVGLAHLTPLTTLQHLDLKRCRNLTNAGLVH----- 444
Query: 189 TDLVLSLTALQNLN-------------------HLERLNLEQ-TQVSDATLFPLSTFKEL 228
+ LT LQ+LN L+ L+L Q ++++D L L+ L
Sbjct: 445 ---LKLLTGLQHLNLSECYHLTDAGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTAL 501
Query: 229 IHLSLRNAS-LTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
HL L S LTD L L+ L+ L +L + R LT++GL P +L+ L+L GG+
Sbjct: 502 QHLDLSQCSKLTDDGLAHLTPLTALQHLVLARCRNLTDAGLAHLTPLETLQHLNLSGGYK 561
Query: 287 LT 288
LT
Sbjct: 562 LT 563
>gi|290991352|ref|XP_002678299.1| predicted protein [Naegleria gruberi]
gi|284091911|gb|EFC45555.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
LT++ +L D S +GDD + + L+ LNLS+ + G ++ PNL L
Sbjct: 134 LTRITSLSAAD--CSFLGDDGIYPIVNFKG-LQKLNLSSNGITWEGCMFISEKFPNLSHL 190
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
SL+ T+I D AI +S M L ++D+ N ++ E ++S NL +L L
Sbjct: 191 SLNETRICDGAIKRLSKMKQLTYLDVGNN------AKITMEGIKLIS----NNLTNLTHL 240
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
N+ V+D L +L L + + +TD +++ S
Sbjct: 241 NISSNNVTDEGLMMACDLPKLQELFVGHNQITDSGINEFS 280
>gi|423637920|ref|ZP_17613573.1| hypothetical protein IK7_04329 [Bacillus cereus VD156]
gi|401272722|gb|EJR78713.1| hypothetical protein IK7_04329 [Bacillus cereus VD156]
Length = 760
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSSLVNLQKL 444
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|421611905|ref|ZP_16053033.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
gi|408497310|gb|EKK01841.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
Length = 455
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L Q LE+L S I D+S+ + + + L+ L + + G+ +AG+ L
Sbjct: 247 MLGQTPTLENLQGDYSKINDESMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALAR 304
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL----------- 193
L + +DD + +S +P++ ++DIS + I Q+G T L
Sbjct: 305 FELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGELTGLTYLGLWETKTNDE 364
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+L+ +L +LE LNL+ T V+D +L L +L L++ L D S +L+ L L
Sbjct: 365 TLSGFGDLINLEELNLKSTSVTDESLPVLMKMIKLKTLNVAGTQLGDDSFLELAKLPNLK 424
Query: 254 NLSI 257
++++
Sbjct: 425 SMNV 428
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+PN + +G IDD + ++ +P LK++ +++T I TD L
Sbjct: 107 IPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAI----------TDETLKTAG--K 154
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L+ ++ L L +T V+D L L+ +L + LRN+++ D + L+ + L ++ + +
Sbjct: 155 LDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKS 214
Query: 261 VLTNSGL 267
+T+ GL
Sbjct: 215 KVTDEGL 221
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 15 VTKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
+ +L +S L+ L + C + + I NKA LA+ L ++ +++ + + +
Sbjct: 269 MAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKA-LARFELRDSS-VDDDGLKVISQLPAV 326
Query: 73 SFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
+++D+S L+ L ++ L +L L + D+++ + NL LNL +T
Sbjct: 327 TYVDISECRLASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDL-INLEELNLKSTSV 385
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
+ + +L + L+ L+++GTQ+ D + ++ +P+LK ++++NT I GF
Sbjct: 386 TDESLPVLM-KMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI-GF 435
>gi|301052969|ref|YP_003791180.1| internalin [Bacillus cereus biovar anthracis str. CI]
gi|300375138|gb|ADK04042.1| internalin [Bacillus cereus biovar anthracis str. CI]
Length = 659
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 119 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 171
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 172 VTPLVKMDHLNSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 228
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 229 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 277
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 278 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 326
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 327 --PLSSLVNLQKLDLE 340
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 137 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLNSLDLSNNKI 191
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 192 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 215
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 216 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 260
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 261 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 291
>gi|417301579|ref|ZP_12088730.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327542171|gb|EGF28664.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 442
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L Q LE+L S I D S+ + + + L+ L + + G+ +AG+ L
Sbjct: 234 MLGQTPTLEYLQGDYSKINDASMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALAR 291
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL----------- 193
L + +DD + +S +P++ ++DIS + I Q+G T L
Sbjct: 292 FELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDE 351
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+L +L +LE LNL+ T V+D +L L +L L++ L D S +L+ L L
Sbjct: 352 TLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLK 411
Query: 254 NLSI 257
++++
Sbjct: 412 SMNV 415
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+PN + +G IDD + ++ +P LK++ +++T I TD L
Sbjct: 94 IPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAI----------TDETLKTAG--K 141
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L+ ++ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 142 LDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKS 201
Query: 261 VLTNSGLGSFKP 272
+T+ GL P
Sbjct: 202 KVTDEGLVKLAP 213
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 3 PRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGT 55
P L +L ++ + +L +S L+ L + C + + I NKA LA+ L +
Sbjct: 239 PTLEYLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKA-LARFELRDS 297
Query: 56 TFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMV 112
+ +++ + + ++++D+S L+ L ++ L +L L + D E +
Sbjct: 298 S-VDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGLWETKTND---ETL 353
Query: 113 ACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
A G NL LNL +T + + +L + L+ L+++GTQ+ D + ++ +P+LK
Sbjct: 354 AGFGDLVNLEELNLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLKS 412
Query: 171 IDISNTDIKGF 181
++++NT I GF
Sbjct: 413 MNVANTSI-GF 422
>gi|227815825|ref|YP_002815834.1| internalin, partial [Bacillus anthracis str. CDC 684]
gi|227007550|gb|ACP17293.1| internalin [Bacillus anthracis str. CDC 684]
Length = 526
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 45/218 (20%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 4 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 58
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--------- 180
++ I + N++ L LSG QI+D ++ ++ M L +++++N I
Sbjct: 59 TNVAPLI---EMKNVKSLYLSGNQIED--VTALAKMEQLDYLNLANNKITNVAPLSALKN 113
Query: 181 --FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLF 220
++ G + TDLVL+ L+ ++ + LE L + + ++ D T
Sbjct: 114 VTYLTLAGNQIEDIKPLYSLPLTDLVLTRNKVKDLSGIEQMKQLEELWIGKNEIKDVT-- 171
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
PLS +L L L N L D++ LSSL L L +
Sbjct: 172 PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 207
>gi|423526237|ref|ZP_17502688.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuA4-10]
gi|401164539|gb|EJQ71873.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuA4-10]
Length = 990
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 172/391 (43%), Gaps = 57/391 (14%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IQDVSGLEYMTNLENLTLEEVKLENIQFISKLRQLKSLSITYGELEDIGPLAELEHIEVL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 295 TLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKTLFTVTS-LRTLAVANNQISNDN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 350 -LAGIEQLKNVKNLSLSNNGLTN--IEHITAMKKLVELDLAKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV + L K
Sbjct: 393 NIAPLSRLSTVQSLNLEENYISDIT--PLSQLTDLYDLKLGSNEIRDV--RPVQELGKRM 448
Query: 254 NLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLL-----TEDAILQ--FCKMHPRIEVW 305
++ I R + + S + + +L G L EDAIL F K + E
Sbjct: 449 DIDIQRQKIFLDE--ASVDEEIKIPIYNLKGEPLQNINFKNEDAILNNGFIKWNSPGEKT 506
Query: 306 HE--LSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRL---KYSREELL 360
+E L +I NG T ++ + KQK+ + L Q + + RE L
Sbjct: 507 YEFKLDTNTAESKIRFNG-----TVIQNIVEKQKESENLILDKTLQQHINKENFGRENLN 561
Query: 361 E-------LQYSSLSLARPDDSSTQDAMGLR 384
LQ L + + +D +GL
Sbjct: 562 APITKEDLLQIKELEILKEKGKEIKDVIGLE 592
>gi|228920141|ref|ZP_04083490.1| Internalin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228839597|gb|EEM84889.1| Internalin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 766
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 392
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 439
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 440 PLSSLVNLQKL 450
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 374 KPLYSLPLKDLVLTRNNV 391
>gi|171912739|ref|ZP_02928209.1| Leucine-rich repeat [Verrucomicrobium spinosum DSM 4136]
Length = 443
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 35/286 (12%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF--INERE 62
L LN+ T VT L ++ L L N + + E + PLAKI TT + R
Sbjct: 174 LQQLNICSTKVTDLEPLAGLSSLRQFNFSFTGVTELD----PLAKI----TTLQQLEFRL 225
Query: 63 AFLYIETSL-----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 117
A ++ +L L LD+S + + L+ + AL+ L + + + D + +A + A
Sbjct: 226 APIFDLDALAGLRELQKLDLSTTEVRDLEPLSGLGALQKLYFNHTAVSD--LGPLAGLSA 283
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
LR L+L R + +G LAG L L+ L L+ TQ+ D ++ ++ + +L+ +D+S T
Sbjct: 284 -LRKLDLRCARRVT-DIGPLAG-LHALQRLILASTQVTD--LTPLTELRNLQHLDLSRTK 338
Query: 178 IKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+ ++ +G + V L L L+RL L+ TQVSD L P++ L
Sbjct: 339 VSDLSPLTSLTALRSLGLTSTQVSDLAPLAAYRDLQRLFLDSTQVSD--LGPVAGMNSLQ 396
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
L + + S+TD L L+ L++L LS+ D NS + P S
Sbjct: 397 ELYVSHTSVTD--LGPLAGLTELKRLSV-DECAVNSMPPTISPNES 439
>gi|356529873|ref|XP_003533511.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
TDR-like [Glycine max]
Length = 1187
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 44/281 (15%)
Query: 11 AWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIET 69
+W +T P S + L+LS+ + + + + L ++L+G F + ++ E
Sbjct: 73 SWRAITCHPKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFTGSFQYAIF-EL 131
Query: 70 SLLSFLDVSNSSL-SRFC-FLTQMKALEHLD-LSSSMIGDDSVEMVACVGANLRNLNLSN 126
+ L LD+S++S S F ++++K L H + S+S G E+ + LNL
Sbjct: 132 TELRTLDISHNSFNSTFPPGISKLKFLRHFNAYSNSFTGPLPQELTTL--RFIEQLNLGG 189
Query: 127 TRFSSAGVGILAGHLPNLEILSLSG--------------TQIDDYAISY----------M 162
+ FS G+ G P L+ L L+G +++ I Y +
Sbjct: 190 SYFSD-GIPPSYGTFPRLKFLDLAGNAFEGPLPPQLGHLAELEHLEIGYNNFSGTLPSEL 248
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
++P+LK++DIS+T+I G + + L NL LE L L + +++ L
Sbjct: 249 GLLPNLKYLDISSTNISGNV------------IPELGNLTKLETLLLFKNRLTGEIPSTL 296
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
K L L L + LT Q++ L++LT L++ + LT
Sbjct: 297 GKLKSLKGLDLSDNELTGPIPTQVTMLTELTMLNLMNNNLT 337
>gi|254829631|ref|ZP_05234318.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
gi|258602049|gb|EEW15374.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
Length = 1778
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++A +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQTNLIANIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 704 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLIAN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
>gi|95108203|emb|CAD17823.3| lrr-gala family type III effector protein (gala 2) [Ralstonia
solanacearum GMI1000]
Length = 1035
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 144
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 98 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 154
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
E L+++G +I D ++ PSLK ++ ++ I ++ AE+ L
Sbjct: 155 ESLNVAGAEIGDGGARLLAANPSLKSLNAASGGISASGARMLAESPT------------L 202
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 261
E L+L Q + DA L+ + L HL++RN +TD+ L+ L +L + + V
Sbjct: 203 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDLGTRALALNPALVSLDLGNLVTET 262
Query: 262 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
+T G + RSLK L + G L +D + +
Sbjct: 263 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 313
>gi|72386459|ref|XP_843654.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62360673|gb|AAX81083.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70800186|gb|AAZ10095.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 706
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L L+LS + G+ + LPN+ LSL GT +D I +S L +D S
Sbjct: 218 LEELSLSGCKNIKKGLEHICA-LPNVRKLSLRGTAANDACILSLSGSTHLADLDCSECMN 276
Query: 179 KGFIQQVGAETDL-VLSLTALQNLN----------HLERLNLEQTQVSDATLFPLSTFKE 227
I+ +G + L VLSL N+ +L LNL T + D + +STFK+
Sbjct: 277 ISDIKALGKISPLEVLSLEKCINMKEGLEELAAIPNLRELNLASTCIDDECVIKVSTFKQ 336
Query: 228 LIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 257
L+HL+ N ++TD+ L+ + L LSI
Sbjct: 337 LVHLNCENCLAVTDI--QPLAKMKTLEYLSI 365
>gi|406835014|ref|ZP_11094608.1| hypothetical protein SpalD1_25335 [Schlesneria paludicola DSM
18645]
Length = 497
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEI 146
L +K L LDLSS+ I D ++ + + NL +L L + G L ++ NL+
Sbjct: 267 LLDLKNLTDLDLSSTQITDAGLKEIGQL-ENLTSLYLEGCGGITDVGFRELR-NIKNLKR 324
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-IQQVGAETDLV-----------LS 194
L+L+ I D + + + SL+ +D+S T I IQ++G T+L L
Sbjct: 325 LALARCGITDLGMKGLGQLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNITDLG 384
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSKL 252
L + L +L+ L L+ ++DA + L F ++HL ++ +TD L +L L KL
Sbjct: 385 LREINGLENLKELYLKSAFITDAGMKELGKFHNMNMLHL-IQCDGITDAGLKELRDLKKL 443
Query: 253 TNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
+ + +T++G+ K + L +L++ G +T + + ++ P ++
Sbjct: 444 SMFELYGCRNVTDAGIDELKEHKQLTILNV-GATQVTVSGVNKLKELLPDTQI 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 19/249 (7%)
Query: 46 PLAKISLAGTTFINERE-----AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 100
P+ I G NE+ F ++ T + S S + +R L+ +K L L
Sbjct: 76 PVTTIYFDGHGKFNEKHLNLLMPFSHLTTLVFSNFKSSQITSARLSDLSGLKNLTSLHFE 135
Query: 101 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 160
++ I ++ + + + NL L+L T + AG+ L + L LSLSG I D
Sbjct: 136 NTEISNEGIHELQEL-KNLTTLSLHTTHVTDAGLRNLR-EVSKLTTLSLSGNSISDDGFK 193
Query: 161 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 220
+ + L + + +I + L + L +L+ L+L ++D+ L
Sbjct: 194 ELGELKHLSSLSLRLENIDD------------VQLDEISKLENLKTLSLHVPSITDSELK 241
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L T K L L L N+ +TD L L L LT+L + +T++GL +L L
Sbjct: 242 QLRTVKNLTKLFLINSKITDAGLKPLLDLKNLTDLDLSSTQITDAGLKEIGQLENLTSLY 301
Query: 281 LHGGWLLTE 289
L G +T+
Sbjct: 302 LEGCGGITD 310
>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
Length = 592
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++ MK L L++S ++IGD+ ++++ + L +L++ N R GV ++ + L
Sbjct: 297 ISGMKQLTSLNISGNLIGDEGAKLISEM-KQLTSLDIYNNRIGDEGVKSIS-EMKQLTSF 354
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+S I D +S M L + ISN ++G E + + + L L
Sbjct: 355 DISNNLIYDEGAKSISGMKQLTSLTISNN-------RIGGE-----GVKFISEIKQLTSL 402
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
N+ + ++ +S K+L L++ + D + +S + +LT+L I + + + G+
Sbjct: 403 NISKNEIDGEGAKFISGMKQLTSLTIYKNGIGDEGVKSISEMKQLTSLDISNNRIGDEGV 462
Query: 268 GSFKPPRSLKLLDLHGGWLLTEDA 291
S L LD+ + E A
Sbjct: 463 KSISEMEQLISLDISTNVIGGEGA 486
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 42/243 (17%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNL 144
F++ MK L +D+S + IG + + ++ + L +LN+SN G ++G HL +L
Sbjct: 128 FISGMKQLTSVDISGNRIGIEGAKSISEM-KQLTSLNISNNIIGVEGAKSISGMKHLTSL 186
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-----------------FIQQVGA 187
+I SG +I D + +S M L +DIS I G F ++G
Sbjct: 187 DI---SGNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDIFYNRIGG 243
Query: 188 E-TDLVLSLTALQNLN------------------HLERLNLEQTQVSDATLFPLSTFKEL 228
E L+ + L +LN L LN+ + + +S K+L
Sbjct: 244 EGAKLISEMKQLTSLNISTNEIDVEGSKLISEMKQLTSLNISGNLIGVEGVKSISGMKQL 303
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 288
L++ + D +S + +LT+L I + + + G+ S + L D+ +
Sbjct: 304 TSLNISGNLIGDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNLIYD 363
Query: 289 EDA 291
E A
Sbjct: 364 EGA 366
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++M+ L LD+S+++IG + + ++ + L +L++ R G +++ + L L
Sbjct: 201 ISEMEQLISLDISTNVIGGEGAKFISEM-KQLTSLDIFYNRIGGEGAKLIS-EMKQLTSL 258
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
++S +ID +S M L ++IS +G E + ++ + L L
Sbjct: 259 NISTNEIDVEGSKLISEMKQLTSLNISGN-------LIGVE-----GVKSISGMKQLTSL 306
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
N+ + D +S K+L L + N + D + +S + +LT+ I + ++ + G
Sbjct: 307 NISGNLIGDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNLIYDEGA 366
Query: 268 GSFKPPRSL 276
S + L
Sbjct: 367 KSISGMKQL 375
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F++ MK L L + + IGD+ V+ ++ + L +L++SN R GV ++ + L
Sbjct: 416 FISGMKQLTSLTIYKNGIGDEGVKSISEM-KQLTSLDISNNRIGDEGVKSIS-EMEQLIS 473
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L +S I ++S M L +DIS I G + ++ + L
Sbjct: 474 LDISTNVIGGEGAKFISEMKQLTSLDISGN----LIYDEGVK--------SISEMKQLTS 521
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
LN+ Q+ +S K+L L + + D +S + +LT+L +
Sbjct: 522 LNISGNQIGVEGAKFISEMKQLTSLDISKNEIGDAGAKFISEMKQLTSLDV 572
>gi|290981770|ref|XP_002673604.1| hypothetical protein NAEGRDRAFT_58930 [Naegleria gruberi]
gi|284087189|gb|EFC40860.1| hypothetical protein NAEGRDRAFT_58930 [Naegleria gruberi]
Length = 494
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 72 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L++LDVS + +S L+Q+ L HL+++ ++IG + + ++ + LR L + F
Sbjct: 251 LTYLDVSWNYISDEGAKVLSQLSQLTHLNVNCTIIGIEGAKYISKL-TKLRTLIAARNNF 309
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-------I 182
G + + L L +S I + I Y+S M L ++I++ I F I
Sbjct: 310 WIEGCQYFS-EMEQLTALDVSHNSIGNTGIKYLSKMKQLTELNINDNAINQFGTEESKLI 368
Query: 183 QQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
+++ T L +S +TA+ ++ L LN+ ++ A +S + L L +
Sbjct: 369 RELSQLTKLSISSNNIGIEGVTAISTMSQLRTLNIFFNRIGLAGAKLISGMQNLTVLDIC 428
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
N + ++S + +LT L I ++ N G + K + LK L
Sbjct: 429 NNDIGTNGAKEISKMKQLTKLDIARNMIGNEGAKALKSMKQLKSL 473
>gi|255030546|ref|ZP_05302497.1| hypothetical protein LmonL_18171 [Listeria monocytogenes LO28]
Length = 400
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 80 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 137
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 138 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 191
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 192 PSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 246
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 247 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNL 301
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 302 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 360
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 169 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 226
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 227 SDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 284
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 285 FNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 344
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 211
+P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 345 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRN 385
>gi|196035360|ref|ZP_03102765.1| putative internalin [Bacillus cereus W]
gi|195992037|gb|EDX56000.1| putative internalin [Bacillus cereus W]
Length = 765
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 432
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 367 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 397
>gi|15896525|ref|NP_349874.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738484|ref|YP_004637931.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459994|ref|YP_005672414.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026357|gb|AAK81214.1|AE007824_3 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510683|gb|ADZ22319.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336293297|gb|AEI34431.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 849
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 23/195 (11%)
Query: 70 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
S L+ LD+SN++LS FL+ + L++L+LSS+ I D + ++ + NL L+LS +
Sbjct: 598 SNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIAD--ISALSNL-TNLNQLDLSTNQI 654
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-SNT--DI---KGF-- 181
S+ +L L IL+L+ +I+D IS ++ + L+ + + SNT DI K F
Sbjct: 655 SNISS---LNNLIGLNILNLNSNKIND--ISSLTNLKQLQTLSLNSNTIQDIDVLKNFTV 709
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+ +G + + ++ L NLN L+ ++L Q+++ + T + +H L N + D+
Sbjct: 710 LNVLGLSNNKITDISTLANLNSLKNISLSNNQITNISCLCNLTNAQYLH--LENNQINDI 767
Query: 242 SLHQLSSLSKLTNLS 256
S+L+KL NL+
Sbjct: 768 -----SALNKLKNLA 777
>gi|254726170|ref|ZP_05187952.1| putative internalin [Bacillus anthracis str. A1055]
Length = 682
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 142 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 194
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 195 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 251
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 252 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 300
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 301 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 349
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 350 --PLSSLVNLQKLDLE 363
>gi|423579623|ref|ZP_17555734.1| hypothetical protein IIA_01138 [Bacillus cereus VD014]
gi|401218085|gb|EJR24770.1| hypothetical protein IIA_01138 [Bacillus cereus VD014]
Length = 760
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNYLALRGNEFA---D 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 433
Query: 243 -LHQLSSLSKL 252
L L +L KL
Sbjct: 434 PLSSLVNLQKL 444
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L +L L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNYLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGL 267
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|423552836|ref|ZP_17529163.1| hypothetical protein IGW_03467 [Bacillus cereus ISP3191]
gi|401185449|gb|EJQ92543.1| hypothetical protein IGW_03467 [Bacillus cereus ISP3191]
Length = 765
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 432
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 367 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 397
>gi|423524772|ref|ZP_17501245.1| hypothetical protein IGC_04155 [Bacillus cereus HuA4-10]
gi|401168998|gb|EJQ76245.1| hypothetical protein IGC_04155 [Bacillus cereus HuA4-10]
Length = 752
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|229090382|ref|ZP_04221625.1| Internalin [Bacillus cereus Rock3-42]
gi|228692965|gb|EEL46683.1| Internalin [Bacillus cereus Rock3-42]
Length = 760
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 220 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 272
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 273 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 329
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 330 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 378
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 379 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 427
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 428 --PLSSLVNLQKLDLE 441
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 238 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 292
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 293 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 316
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 317 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 361
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 362 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 392
>gi|404449942|ref|ZP_11014929.1| putative internalin A [Indibacter alkaliphilus LW1]
gi|403764421|gb|EJZ25322.1| putative internalin A [Indibacter alkaliphilus LW1]
Length = 502
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 49/187 (26%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
ANL LN++NT+ SS +AG NLE+L+L+ T + D +S + + LK +++
Sbjct: 69 ANLTELNVANTQVSS-----IAGLEKATNLEVLNLNFTNVTD--MSPIQDLTGLKELNLW 121
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLN----------------HLERLNLEQTQVSD-- 216
N D++G + A D V +L L+ L+ +L+ LNL + VSD
Sbjct: 122 NLDLEG---EGAAILDFVQNLNELEFLDLRETPTSDISRLAGKSNLKHLNLREANVSDLS 178
Query: 217 -------------------ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ PL L +LSLRNA + D Q S +KL +I
Sbjct: 179 PLSGMTQFEYLNFNRCGNITDISPLDGMVNLYYLSLRNAEVGDEQFKQFSQYTKLVESNI 238
Query: 258 RDAVLTN 264
R+ +T+
Sbjct: 239 RNTGITD 245
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ L+V+N+ +S L + LE L+L+ + + D S + G L+ LNL N
Sbjct: 71 LTELNVANTQVSSIAGLEKATNLEVLNLNFTNVTDMS-PIQDLTG--LKELNLWNLDLEG 127
Query: 132 AGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFIQ 183
G IL +L LE L L T D IS ++ +LK +++ ++ G Q
Sbjct: 128 EGAAILDFVQNLNELEFLDLRETPTSD--ISRLAGKSNLKHLNLREANVSDLSPLSGMTQ 185
Query: 184 -------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ G TD+ + L + +L L+L +V D S + +L+ ++RN
Sbjct: 186 FEYLNFNRCGNITDI----SPLDGMVNLYYLSLRNAEVGDEQFKQFSQYTKLVESNIRNT 241
Query: 237 SLTDVS 242
+TD++
Sbjct: 242 GITDIT 247
>gi|407424780|gb|EKF39143.1| hypothetical protein MOQ_000636 [Trypanosoma cruzi marinkellei]
Length = 936
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 353 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMHRDVSRLKKLSRLSLEGCR-KI 411
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G+ L L L L L + + D +++ + P L +D+ Q G T L
Sbjct: 412 EGLQWLRA-LTQLRELDLGYSSVTDDSLTALRFCPELVRLDL---------QWCGRITSL 461
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 250
+ AL + L LNL +T V+D L PL F L +SL +++DV++ L +L+
Sbjct: 462 KCLVGAL--CDSLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV--LCNLT 517
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
+L + + +TN G+ S ++L+ + + + LT+ + L
Sbjct: 518 RLREVDVGRTRVTNGGVLSLSQCQALRAMRMRQCYRLTDASFL 560
>gi|228926459|ref|ZP_04089531.1| Internalin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228833283|gb|EEM78848.1| Internalin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 771
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 249 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 303
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 304 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 327
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 328 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 372
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 373 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 403
>gi|118476901|ref|YP_894052.1| internalin [Bacillus thuringiensis str. Al Hakam]
gi|118416126|gb|ABK84545.1| internalin [Bacillus thuringiensis str. Al Hakam]
Length = 777
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 249 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 303
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 304 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 327
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 328 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 372
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 373 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 403
>gi|229120968|ref|ZP_04250210.1| Internalin [Bacillus cereus 95/8201]
gi|228662628|gb|EEL18226.1| Internalin [Bacillus cereus 95/8201]
Length = 771
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 249 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 303
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 304 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 327
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 328 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 372
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 373 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 403
>gi|326470875|gb|EGD94884.1| F-box protein [Trichophyton tonsurans CBS 112818]
Length = 775
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 119 LRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISN 175
L++LNLSN R + GV ILA ++P LE L LS T DD S ++ P LKFI+
Sbjct: 423 LKHLNLSNCRLLTENGVKILAHNVPELEGLHLSFLSTLTDDCIASIINTTPKLKFIE--- 479
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQ-VSDATLFP-LSTFKELIHLS 232
++++G T+ V++ A + LE LN+ + + D + P L L L
Sbjct: 480 ------LEELGELTNFVITELARAPCSQTLEHLNISFCENIGDTGILPLLRKCPSLRSLD 533
Query: 233 LRNASLTDVSLHQLSS 248
L N ++D++L ++ S
Sbjct: 534 LDNTRISDLTLMEICS 549
>gi|319881517|gb|ADV75085.1| TLR2B [Oceanodroma leucorhoa]
Length = 397
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 70 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 125
SLL+ + V N+ + C L+Q + +LE+LDLS++++GD S+E AC G +L+ LNLS
Sbjct: 97 SLLTKVTVENTKVFLVPCRLSQKLLSLEYLDLSANLLGDQSLEHSACQGGWPSLQTLNLS 156
Query: 126 NTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQ 183
S + + + HL NL +L +S D I + P +LK++++S+T I
Sbjct: 157 QNSLSDLEMTVKSLSHLRNLILLDISQNNFGD--IPDVCEWPQTLKYLNLSSTQIPKLTT 214
Query: 184 QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ + VL ++A LQ L +L+ L L + Q+ L + L+ +S+R
Sbjct: 215 CIPPTLE-VLDVSANNLKEFGLQ-LPYLKELYLAKNQLK--ALPGAAPVPNLVAMSIRRN 270
Query: 237 SLTDVSLHQLSSLSKLTNLSIRD 259
L S + S K+ L D
Sbjct: 271 KLNGFSREEFESFRKMELLDASD 293
>gi|49480077|ref|YP_035555.1| internalin [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49331633|gb|AAT62279.1| internalin [Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 765
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 249 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 303
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 304 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 327
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 328 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 372
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 373 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 403
>gi|423516081|ref|ZP_17492562.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
gi|401165924|gb|EJQ73234.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
Length = 766
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLNYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRDV 476
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLNYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|46447548|ref|YP_008913.1| hypothetical protein pc1914 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401189|emb|CAF24638.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 37/292 (12%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYI 67
NL G+ L +++L+ LNLS C N A L ++ L G ++ Y
Sbjct: 256 NLTDAGLAYLKPLTALQHLNLSGC-------WNLTDAGLVHLTPLVGLQHLD----LSYC 304
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
E +++++ L+ LT + AL+HL LS D+ + L++L+LS
Sbjct: 305 E-------NLTDAGLAH---LTPLTALQHLGLSCCENLTDAGLAHLALLTTLQHLDLSCC 354
Query: 128 -RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
+ A + L L L+ L L G + + D +++++ + +L+ +D+S
Sbjct: 355 YNLTDASLSHLTP-LTALQHLYLIGCENLTDAGLAHLTPLTALQHLDLSCC-----FNLT 408
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLH 244
A + LT LQ+LN L R +++DA L L+T L HL+L LTD L
Sbjct: 409 DAGLSHLTPLTGLQHLN-LSRC----YKLTDAGLAHLTTLVALQHLNLSECRHLTDAGLA 463
Query: 245 QLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 295
L+ L+ L +L ++ + LT++GL P +L+ LDL LT+D + +F
Sbjct: 464 HLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRF 515
>gi|229183622|ref|ZP_04310845.1| Internalin [Bacillus cereus BGSC 6E1]
gi|228599865|gb|EEK57462.1| Internalin [Bacillus cereus BGSC 6E1]
Length = 771
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 249 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 303
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 304 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 327
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 328 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 372
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 373 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 403
>gi|228945027|ref|ZP_04107388.1| Internalin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228814696|gb|EEM60956.1| Internalin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 771
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 249 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 303
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 304 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 327
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 328 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 372
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 373 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 403
>gi|218902536|ref|YP_002450370.1| putative internalin [Bacillus cereus AH820]
gi|218536306|gb|ACK88704.1| putative internalin [Bacillus cereus AH820]
Length = 779
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 239 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 291
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 292 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 348
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 349 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 397
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 398 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 446
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 447 --PLSSLVNLQKLDLE 460
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 257 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 311
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 312 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 335
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 336 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 380
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 381 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 411
>gi|30261431|ref|NP_843808.1| internalin, partial [Bacillus anthracis str. Ames]
gi|49184263|ref|YP_027515.1| internalin, partial [Bacillus anthracis str. Sterne]
gi|254682509|ref|ZP_05146370.1| internalin, putative [Bacillus anthracis str. CNEVA-9066]
gi|254733925|ref|ZP_05191639.1| internalin, putative [Bacillus anthracis str. Western North America
USA6153]
gi|254740385|ref|ZP_05198076.1| internalin, putative [Bacillus anthracis str. Kruger B]
gi|254753775|ref|ZP_05205810.1| internalin, putative [Bacillus anthracis str. Vollum]
gi|254758872|ref|ZP_05210899.1| internalin, putative [Bacillus anthracis str. Australia 94]
gi|386735134|ref|YP_006208315.1| Internalin [Bacillus anthracis str. H9401]
gi|421507112|ref|ZP_15954033.1| internalin [Bacillus anthracis str. UR-1]
gi|421637928|ref|ZP_16078525.1| internalin [Bacillus anthracis str. BF1]
gi|30255285|gb|AAP25294.1| putative internalin [Bacillus anthracis str. Ames]
gi|49178190|gb|AAT53566.1| internalin, putative [Bacillus anthracis str. Sterne]
gi|384384986|gb|AFH82647.1| Internalin [Bacillus anthracis str. H9401]
gi|401822764|gb|EJT21913.1| internalin [Bacillus anthracis str. UR-1]
gi|403395487|gb|EJY92726.1| internalin [Bacillus anthracis str. BF1]
Length = 542
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 2 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 54
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 55 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 111
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 112 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 160
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 161 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 209
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 210 --PLSSLVNLQKLDLE 223
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 20 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 74
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 75 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 98
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 99 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 143
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 144 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 174
>gi|228932710|ref|ZP_04095583.1| Internalin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228826968|gb|EEM72729.1| Internalin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 760
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 220 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 272
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 273 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 329
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 330 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 378
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 379 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 427
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 428 --PLSSLVNLQKLDLE 441
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 238 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 292
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 293 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 316
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 317 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 361
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 362 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 392
>gi|224113693|ref|XP_002332513.1| predicted protein [Populus trichocarpa]
gi|222832619|gb|EEE71096.1| predicted protein [Populus trichocarpa]
Length = 949
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 23/237 (9%)
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQ-----MKALEHLDLSSSMIGDDSVEMVACVGA 117
A L+ L LD+S++ L CF Q LE L+LS + D S+ +
Sbjct: 99 ASLFFPFRELQSLDLSSTGLVG-CFENQGFEVLSSKLELLNLSDNRFNDKSILSCLTGLS 157
Query: 118 NLRNLNLSNTRFSSA----GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
L++L+LS+ + + + G I + HL LE L LS +D +SY+ SLK +++
Sbjct: 158 TLKSLDLSHNQLTGSASFYGFEIKSSHLRKLENLDLSYNMFNDNILSYLGGFSSLKSLNL 217
Query: 174 SNTDIKGFIQQVGAET-DLVLSLTALQNLN--HLERLNLEQTQVSDATLFPLSTFKELIH 230
S + G G+ +L+ SL L +L L+ NL T +S T F +T +EL
Sbjct: 218 SGNMLLGSTTVNGSRKLELLHSLGVLPSLKTLSLKDTNLSWTSISQETFFNSTTLEELY- 276
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS----GLGSFKPPRSLKLLDLHG 283
L SL L + +L L LS+ + L ++ GL K +L+ LDL+G
Sbjct: 277 --LDRTSLPINFLQNIGALPALKVLSVGECDLHDTLPAQGLCELK---NLEQLDLYG 328
>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+T+MK L LD+S + IGD+ + ++ + L +L++S+ G ++ + L
Sbjct: 121 FITEMKQLTSLDISENQIGDEGAKYISEM-RQLTSLDISDIEIGDEGAKYIS-EMKQLTS 178
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++S I D ++S M L + I K I GA+ ++ + L
Sbjct: 179 LNISYNAISDEGAKFISEMKQLMSLHI----YKNLIGDEGAK--------YIREMKQLTS 226
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
LN+ +SD +S K+L L + ++ +S + +LT+L I D + + G
Sbjct: 227 LNISYNSISDEGAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEG 286
Query: 267 LGSFKPPRSLKLLDLHG 283
+ + L L + G
Sbjct: 287 VKYLSEMKQLTSLTISG 303
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ +MK L L++S + I D+ + ++ + L +L++ S G ++ + L
Sbjct: 217 YIREMKQLTSLNISYNSISDEGAKFISEM-KQLTSLDIVFNEISGEGAKFIS-EMKQLTS 274
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L +S +I D + Y+S M L + IS +I + Q+ E +S + L
Sbjct: 275 LDISDNEIGDEGVKYLSEMKQLTSLTISGNEIT-YCNQISEEGAKFIS-----EMKQLTS 328
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++ +SD +S K+L L++ S++ +S + +LT+L I + + G
Sbjct: 329 LDISYNLISDEGAKYISEMKQLTSLNISYNSISGEGAKFISEMKQLTSLDIVSNRIGDEG 388
Query: 267 LGSFKPPRSLKLLDL 281
+ L L++
Sbjct: 389 AKYISEMKQLTSLNI 403
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+++MK L L + ++IGD+ + + + L +LN+S S G ++ + L
Sbjct: 193 FISEMKQLMSLHIYKNLIGDEGAKYIREM-KQLTSLNISYNSISDEGAKFIS-EMKQLTS 250
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L + +I ++S M L +DIS+ +I + +E + SLT + N +
Sbjct: 251 LDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTI--SGNEITY 308
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
N Q+S+ +S K+L L + ++D +S + +LT+L+I ++ G
Sbjct: 309 CN----QISEEGAKFISEMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEG 364
Query: 267 LGSFKPPRSLKLLDL 281
+ L LD+
Sbjct: 365 AKFISEMKQLTSLDI 379
>gi|228914000|ref|ZP_04077622.1| Internalin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845605|gb|EEM90634.1| Internalin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 779
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 239 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 291
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 292 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 348
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 349 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 397
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 398 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 446
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 447 --PLSSLVNLQKLDLE 460
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 257 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 311
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 312 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 335
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 336 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 380
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 381 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 411
>gi|290994585|ref|XP_002679912.1| hypothetical protein NAEGRDRAFT_78842 [Naegleria gruberi]
gi|284093531|gb|EFC47168.1| hypothetical protein NAEGRDRAFT_78842 [Naegleria gruberi]
Length = 378
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 33/232 (14%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHL-DLSSSMIGDDSVEMVACVGA--NLRNLNLSNTR 128
L FLD++N C L +++ L+HL +L S ++ + +E V + +L +L+L +
Sbjct: 88 LQFLDLTN------CRLKKIENLDHLVNLQSLLLRQNLIEKVEGLKGLKSLVHLDLYGNQ 141
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV-GA 187
V L HL NLEIL LS ++ + + + MP L+ + N IK ++
Sbjct: 142 IKRVDVNEL-NHLQNLEILDLSFNKL-RHMVKGLK-MPHLRELYYVNNKIKEIEEEATKG 198
Query: 188 ETDL----VLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
ETDL +L L A L+NL L++L L + ++++ L+T K+LI LSL++
Sbjct: 199 ETDLPALELLELGANRLREIKNLENLTTLKQLWLGKNKITEIK--GLNTLKQLIRLSLQS 256
Query: 236 ASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
+ L ++ L++LT L I + + T GL + L LLDL ++
Sbjct: 257 NRIK--KLENINHLTQLTELYISENGIETIEGLDTLT---ELVLLDLAQNFI 303
>gi|422408524|ref|ZP_16485485.1| internalin A, partial [Listeria monocytogenes FSL F2-208]
gi|313610685|gb|EFR85741.1| internalin A [Listeria monocytogenes FSL F2-208]
Length = 439
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 45/261 (17%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T ++ L N+++L L L N I I + +N L ++ + G T + S+L
Sbjct: 8 TDISPLANLTNLTGLTLFNNQITDI-DALKNLTNLNRLEITGNTIS---------DISVL 57
Query: 73 SFLDVSNSSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
S L +SL + F L + LE LD+SS+ + D SV +A + NL L
Sbjct: 58 SGL----TSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLERLI 110
Query: 124 LSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 111 ATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLA 164
Query: 183 QQVGAE--TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLR 234
G T+L L + N++ +E L L + Q+ D + P+S K L +L+L
Sbjct: 165 PLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLALY 222
Query: 235 NASLTDVSLHQLSSLSKLTNL 255
+++D+S +SSL+KL L
Sbjct: 223 FNNISDIS--PVSSLTKLQRL 241
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN--TDIKGF-----IQQVGAETDLV 192
+L NL L ++G I D IS +S + SL+ + N TD+K ++++ ++ V
Sbjct: 37 NLTNLNRLEITGNTISD--ISVLSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKV 94
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN---------ASLT---- 239
++ L L +LERL Q+SD T PL L LSL ASLT
Sbjct: 95 SDISVLAKLTNLERLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGTLASLTNLTS 152
Query: 240 -DVSLHQLSSLSKLTNLS 256
DV+ +Q+S+L+ L+ L+
Sbjct: 153 LDVANNQISNLAPLSGLT 170
>gi|157873267|ref|XP_001685146.1| hypothetical protein LMJF_31_1600 [Leishmania major strain
Friedlin]
gi|68128217|emb|CAJ08348.1| hypothetical protein LMJF_31_1600 [Leishmania major strain
Friedlin]
Length = 811
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA---CVGANLRNLNLSNTRFSSA 132
D + ++R CFL + LS + D V +A CV L LS TR ++
Sbjct: 296 DFDCAGIARCCFL------RSVHLSGCNVKDADVPHLAQLPCV----EELLLSRTRITNV 345
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
+ AG L I+ LS Q+D I + +P L +D+S+T LV
Sbjct: 346 Q-ALAAGK--GLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSST--------------LV 388
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ L L LNL +T V+ + LS L HL L N ++ DVS L+ L
Sbjct: 389 SDVNCLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSL 446
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
LS++ ++ ++GL R+L+ L L +T LQ C+ R+++
Sbjct: 447 KTLSLQSTLVDSAGLEGLGRLRTLQDLSL-AHTRVTNVTKLQHCRNLWRLDL 497
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 48/252 (19%)
Query: 49 KISLAGTTF-INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 107
K+S+ T +NE +FLY T+ L ++++ +L R +E L L S +
Sbjct: 192 KLSIKSATLPLNELLSFLYSSTATLRVVEIAGMALPRLQMFALASRIEELVLDSVTVHPH 251
Query: 108 SVEMVACVG----------------------ANLRNLNLSNTR--FSSAGVGILAGHLPN 143
SV + LR L+++N + F AG+
Sbjct: 252 SVVAIGNAERQGNGQPPPPSNWVPLSDLASLQKLRRLDMTNCKGDFDCAGI----ARCCF 307
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI---------KGF--IQQVGAETDLV 192
L + LSG + D + +++ +P ++ + +S T I KG IQ A+ D
Sbjct: 308 LRSVHLSGCNVKDADVPHLAQLPCVEELLLSRTRITNVQALAAGKGLRIIQLSNAQVD-S 366
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ LQ L +L RL+L T VSD L + LI+L+L +T + LS L L
Sbjct: 367 DGIDGLQTLPYLTRLDLSSTLVSDVNC--LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTL 424
Query: 253 TNL-----SIRD 259
+L +IRD
Sbjct: 425 EHLMLNNNNIRD 436
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 135/292 (46%), Gaps = 43/292 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGT-----TFINEREAFLY 66
T V L L + LSN +DS ++G + L ++ L+ T + + ++ +Y
Sbjct: 343 TNVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNCLGQSQSLIY 402
Query: 67 IETS----------------LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 110
+ + L L ++N+++ FL + +L+ L L S+++ +E
Sbjct: 403 LNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLE 462
Query: 111 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
+ + L++L+L++TR ++ H NL L L G+ +D I + +P L+
Sbjct: 463 GLGRL-RTLQDLSLAHTRVTNV---TKLQHCRNLWRLDLQGSFVDQAGIVGLERLPKLRV 518
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELI 229
+ +S TD+ A +L+L + LE+L ++ + V++ + F ++ L
Sbjct: 519 LVLSKTDV--------ASLELILKSES------LEQLEVKFSHVNERSAFFGVTKASALT 564
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
++L + ++D+ + L +L L++ + +T+ G+ RSL+ +DL
Sbjct: 565 DVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCDARSLQEVDL 614
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 88 LTQMKALEHLDLSSSMIGD-----------------DSVEMVACVGA--NLRNLNLSNTR 128
L ++L+ +DL+ + + D SV + +GA LR L+++ T
Sbjct: 603 LCDARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALQQLRRLDIAETS 662
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
SS + L+ LEIL+LS T +DD + SLK + +S T I QVG
Sbjct: 663 VSS--IRSLSA-CQRLEILNLSNTAVDDDGFQGIGQAQSLKVVSMSFTAIT----QVG-- 713
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
L +HLE L+ + V+ L L L+ L+L L + +L++
Sbjct: 714 --------QLGQCSHLEELHAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTN 764
Query: 249 LSKLTNLSIR 258
KL L+++
Sbjct: 765 CRKLLKLNVK 774
>gi|423638533|ref|ZP_17614185.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
gi|401270849|gb|EJR76868.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
Length = 853
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 346 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 390
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 391 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 436
>gi|71754651|ref|XP_828240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833626|gb|EAN79128.1| hypothetical protein Tb11.53.0001 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1399
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 130/309 (42%), Gaps = 42/309 (13%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIET-S 70
+GV L + L LN+ I SI G L ++++ TT +++ EA I T
Sbjct: 432 SGVGCLGTLPYLRVLNIKEAHISSIGFTGIGASKSLLQLTIESTTGLSDVEALANILTLE 491
Query: 71 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS----- 125
LS L + C L + L+ LDLS + DS+ + CV + +LNLS
Sbjct: 492 KLSLLGCNGIDAGIGC-LGNLPQLKVLDLSGTNTDSDSLRGL-CVSQTIVSLNLSHCWKV 549
Query: 126 ------------NTRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSL 168
N S + I AG L L + LS T I D IS+ S L
Sbjct: 550 TSVFHISALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKEL 609
Query: 169 KFIDISNTDIKGFIQQVGAET---DLVL--------SLTALQNLNHLERLNLEQTQVSDA 217
+D+S D I + T DL L L+ L L L LN++ ++++
Sbjct: 610 VTLDLSFCDELFDITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNS 669
Query: 218 TLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
+ L K + L L N L+DV+ LSSLS L L++ SG+G+ L
Sbjct: 670 VIGSLGNGKSFVKLILDNCKGLSDVTF--LSSLSTLKELNLHHCDAVTSGIGTLGRLLQL 727
Query: 277 KLLDLHGGW 285
++LDL GW
Sbjct: 728 RVLDL--GW 734
>gi|170040460|ref|XP_001848016.1| leucine-rich transmembrane protein [Culex quinquefasciatus]
gi|167864100|gb|EDS27483.1| leucine-rich transmembrane protein [Culex quinquefasciatus]
Length = 1512
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
++ L L+L + + D V + ++LR L LS+ F+ +L LP+L+ L L
Sbjct: 743 LQNLNELNLEDNRLRADDVRQIDV--SSLRTLRLSSNNFTVIRENML-DRLPSLQNLVLD 799
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
I + + S +L +D+SN ++ L NLN + L L
Sbjct: 800 RCSIRELPATLFSKNNNLVKLDLSNNYLR------------TLKRNTFNNLNVFKELRLH 847
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGS 269
Q++D LS L LSL LT V ++L L L +L RD +++ SG +
Sbjct: 848 NNQINDFPHVALSNVSTLELLSLSKNQLTSVDFYKLHGLPNLRHLDFRDNTISSLSGFNT 907
Query: 270 FKPPRSLKLLDLHGGWLLT 288
P L ++DL G LL
Sbjct: 908 VTLPH-LDMIDLSGNLLLA 925
>gi|163939236|ref|YP_001644120.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
gi|163861433|gb|ABY42492.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
Length = 766
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRDV 476
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|85679222|gb|ABC72027.1| InlA [Listeria monocytogenes]
Length = 791
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 45/261 (17%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T ++ L N+++L L L N I I + +N L ++ + G T + S+L
Sbjct: 132 TDISPLANLTNLTGLTLFNNQITDI-DALKNLTNLNRLEITGNTIS---------DISVL 181
Query: 73 SFLDVSNSSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
S L +SL + F L + LE LD+SS+ + D SV +A + NL L
Sbjct: 182 SGL----TSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLERLI 234
Query: 124 LSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 235 ATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLA 288
Query: 183 QQVGAE--TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLR 234
G T+L L + N++ +E L L + Q+ D + P+S K L +L+L
Sbjct: 289 PLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLALY 346
Query: 235 NASLTDVSLHQLSSLSKLTNL 255
+++D+S +SSL+KL L
Sbjct: 347 FNNISDIS--PVSSLTKLQRL 365
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN--TDIKGF-----IQQVGAETDLV 192
+L NL L ++G I D IS +S + SL+ + N TD+K ++++ ++ V
Sbjct: 161 NLTNLNRLEITGNTISD--ISVLSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKV 218
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN---------ASLT---- 239
++ L L +LERL Q+SD T PL L LSL ASLT
Sbjct: 219 SDISVLAKLTNLERLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGTLASLTNLTS 276
Query: 240 -DVSLHQLSSLSKLTNLS 256
DV+ +Q+S+L+ L+ L+
Sbjct: 277 LDVANNQISNLAPLSGLT 294
>gi|423387697|ref|ZP_17364949.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
gi|401627891|gb|EJS45747.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
Length = 865
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|229132224|ref|ZP_04261081.1| Internalin [Bacillus cereus BDRD-ST196]
gi|228651272|gb|EEL07250.1| Internalin [Bacillus cereus BDRD-ST196]
Length = 766
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 177
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 238 LTDVSLHQLSSLSKLTNLS-----IRDA 260
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRDV 476
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLT 263
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423531450|ref|ZP_17507895.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
gi|402444333|gb|EJV76220.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
Length = 1016
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|290999671|ref|XP_002682403.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284096030|gb|EFC49659.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 403
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 46 PLAKISLAGTTFINEREAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSS 102
L K+++ G+ +E YI E L++L + ++ +S + L ++K L L + +
Sbjct: 133 QLTKLTIYGSHIGDE--GVRYISELKQLTYLSIPSNGISEYGAKHLRELKQLTTLIIFCN 190
Query: 103 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
+G++ + ++ + L L++ + G L+ L L L +S + D Y+
Sbjct: 191 RVGNEGSKYISEL-KQLTTLSIDENDIGAEGAKYLS-ELTQLTCLDISSNWLGDEGAKYV 248
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAE-TDLVLSLTALQNLN------------------H 203
S M L + I++ ++G E + + SL L+NL+
Sbjct: 249 SKMKQLTTLHINSN-------RIGNEGSKFISSLNQLKNLDICKNDIGDEGLEYFGQLAQ 301
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
L+ L+L ++ D LS K+LI+L ++ L D + L KL L I + +
Sbjct: 302 LKSLDLSYNRIGDEGAQYLSELKQLIYLDIKTNHLGDKGAMPIGELKKLIYLYINNNKIR 361
Query: 264 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
N G + L LD+ + +TE+ F +M I++
Sbjct: 362 NEGAKYISELKQLTKLDIRNNF-ITEEGTKYFTEMKQLIDL 401
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
+L++L++ G+++ E L+ I GNE ++++ T I+E
Sbjct: 155 LKQLTYLSIPSNGISEYGAKHLRELKQLTTLIIFCNRVGNEGSKYISELKQLTTLSIDEN 214
Query: 62 ----EAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVAC 114
E Y+ E + L+ LD+S++ L ++++MK L L ++S+ IG++ + ++
Sbjct: 215 DIGAEGAKYLSELTQLTCLDISSNWLGDEGAKYVSKMKQLTTLHINSNRIGNEGSKFISS 274
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ L+NL++ G+ G L L+ L LS +I D Y+S + L ++DI
Sbjct: 275 LNQ-LKNLDICKNDIGDEGLEYF-GQLAQLKSLDLSYNRIGDEGAQYLSELKQLIYLDIK 332
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
+ GA + L L L + ++ + +S K+L L +R
Sbjct: 333 TN----HLGDKGA--------MPIGELKKLIYLYINNNKIRNEGAKYISELKQLTKLDIR 380
Query: 235 NASLTDVSLHQLSSLSKLTNLSI 257
N +T+ + + +L +L+I
Sbjct: 381 NNFITEEGTKYFTEMKQLIDLTI 403
>gi|290980538|ref|XP_002672989.1| predicted protein [Naegleria gruberi]
gi|284086569|gb|EFC40245.1| predicted protein [Naegleria gruberi]
Length = 315
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S R F+++MK L L++ ++ IGD + + + L +LN+ R G +++
Sbjct: 118 SFERAEFISEMKQLTSLNIYNNRIGDVGAKYINEM-KQLTSLNIGGNRIGIKGAKLIS-E 175
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+ L L +I D Y+S M L +DI Q+G E ++S
Sbjct: 176 MKQLTSLHTYNNRIGDEGAKYISEMKQLTSLDIGGN-------QIGDEGAKLIS-----G 223
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ L L++ ++ D +S K+L L++ + D +S + +LT+L I +
Sbjct: 224 MKRLTSLHIYNNRIGDEGAKLISGMKQLTSLNIGVNEIGDEGAKLISGMKRLTSLQIYNN 283
Query: 261 VLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
+ + G + L L++ G L+ ++
Sbjct: 284 RIGDEGAKYISEMKQLTSLNIGGNELVMKE 313
>gi|218235426|ref|YP_002365348.1| internalin protein [Bacillus cereus B4264]
gi|218163383|gb|ACK63375.1| internalin protein [Bacillus cereus B4264]
Length = 994
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 346 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 390
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 391 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEICDV 436
>gi|423576853|ref|ZP_17552972.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
gi|401206603|gb|EJR13391.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
Length = 766
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTTLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTTLVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|290977933|ref|XP_002671691.1| predicted protein [Naegleria gruberi]
gi|284085262|gb|EFC38947.1| predicted protein [Naegleria gruberi]
Length = 203
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 72 LSFLDVSNS--SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+FL VS + + +++Q+K L +LD+ + IGD+ + ++ + L+NL + N
Sbjct: 28 LTFLGVSGNFVGVEGAKYISQLKQLTNLDICFNNIGDEGAKHISEL-KQLKNLKIGNNYI 86
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
G ++ L ++ LS+S + + Y+S M L ++I I GA+
Sbjct: 87 GVEGAKYIS-QLKHVTKLSISYNNVRVEGVKYISEMKQLTDLNIGEN----VIGDEGAK- 140
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
++ LN L RL++ ++S+A + K+L L+++N ++ +
Sbjct: 141 -------HIKKLNQLTRLSISGVEISEAGAKYICEMKQLTQLNIKNNNIGKIG 186
>gi|157865941|ref|XP_001681677.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68124975|emb|CAJ02737.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 776
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 83/202 (41%), Gaps = 28/202 (13%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP------ 142
++MK+L L+L + + ++ +LR LNL T+ S G LP
Sbjct: 491 SEMKSLTSLELEGTQV-SGTLPPRWSEMKSLRTLNLEGTQVS--------GSLPPEWVSM 541
Query: 143 -NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
+L L+L GTQ+ S M SL +++ T + G + +E +
Sbjct: 542 ASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSE------------M 589
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
L LNLE TQVS A K L +L L L+ + + LTNL +
Sbjct: 590 KSLRTLNLEGTQVSGALPPGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKSLTNLYLEGTQ 649
Query: 262 LTNSGLGSFKPPRSLKLLDLHG 283
++ S + SL+ LDL G
Sbjct: 650 VSGSLPPQWSSLTSLRTLDLEG 671
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP------ 142
++MK+L +L+L + + + + +LR LNL T+ S G LP
Sbjct: 251 SEMKSLTNLELEGTQVSGTLPPGWSSI-KSLRTLNLEGTQVS--------GSLPPEWVSM 301
Query: 143 -NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
+L L+L GTQ+ S M SL +++ T + G + +E +
Sbjct: 302 ASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSE------------M 349
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
L LNLE TQVS + + L L+L ++ + S++ L L++
Sbjct: 350 KSLRTLNLEGTQVSGSLPPQWVSMASLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQ 409
Query: 262 LTNSGLGSFKPPRSLKLLDLHG 283
++ + + +SL L+L G
Sbjct: 410 VSGTLPPGWSEMKSLTSLELEG 431
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLP-------NLEILSLSGTQIDDYAISYMSMMPSLKF 170
+LR LNL T+ S G LP +L L L GTQ+ S + SL+
Sbjct: 231 SLRTLNLEGTQVS--------GTLPPGWSEMKSLTNLELEGTQVSGTLPPGWSSIKSLRT 282
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP-LSTFKELI 229
+++ T + G + ++ L LNLE TQVS TL P S K L
Sbjct: 283 LNLEGTQVSGSLPP------------EWVSMASLRTLNLEGTQVS-GTLPPGWSEMKSLT 329
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L L ++ + S + L L++ ++ S + SL+ L+L G
Sbjct: 330 SLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPQWVSMASLRTLNLEG 383
>gi|392396852|ref|YP_006433453.1| hypothetical protein Fleli_1223 [Flexibacter litoralis DSM 6794]
gi|390527930|gb|AFM03660.1| hypothetical protein Fleli_1223 [Flexibacter litoralis DSM 6794]
Length = 183
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ Q++ L+HL+LSSS + D+ +E++ + N++ L+L T ++ G+ L +L NL+ L
Sbjct: 38 IRQLEKLKHLNLSSSDLIDEQLEIIGKI-ENIQVLDLDLTEITNQGISFLK-YLQNLKEL 95
Query: 148 SLSGT-QIDDYAISYMSMMPSLKFIDISNTDI 178
L Q+ D I ++ + SLKFI I NT I
Sbjct: 96 RLKDNPQLSDNCIEHLITIKSLKFIHIENTAI 127
>gi|229154996|ref|ZP_04283110.1| Internalin [Bacillus cereus ATCC 4342]
gi|228628554|gb|EEK85267.1| Internalin [Bacillus cereus ATCC 4342]
Length = 766
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTPLVKMDHLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK- 390
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 391 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKELHLPNNELKD 437
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M +L +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DHLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|157866015|ref|XP_001681714.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68125012|emb|CAJ02952.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 536
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP------ 142
++MK+L +L+L + + + + +LR LNL T+ S G LP
Sbjct: 251 SEMKSLTNLELEGTQVSGTLPPGWSSI-KSLRTLNLEGTQVS--------GSLPPEWVSM 301
Query: 143 -NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
+L L+L GTQ+ S M SL +++ T + G + +E +
Sbjct: 302 ASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSE------------M 349
Query: 202 NHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L LNLE TQVS TL P K L +L L L+ + + LTNL +
Sbjct: 350 KSLRTLNLEGTQVS-GTLPPGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKSLTNLYLEGT 408
Query: 261 VLTNSGLGSFKPPRSLKLLDLHG 283
++ S + SL+ LDL G
Sbjct: 409 QVSGSLPPQWSSLTSLRTLDLEG 431
>gi|187779624|ref|ZP_02996097.1| hypothetical protein CLOSPO_03220 [Clostridium sporogenes ATCC
15579]
gi|187773249|gb|EDU37051.1| leucine Rich Repeat protein [Clostridium sporogenes ATCC 15579]
Length = 1360
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 58/294 (19%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI------------- 50
+L+ L+L+ GV + N+S LE L + + I EG E+ L +
Sbjct: 684 QLTRLDLSKNGVVSIANLSGLENLQYLSLYENKISEGEESLKKLYSLKELYLKNSGVSNF 743
Query: 51 --------SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR----FCFLTQMKALEHLD 98
+L F + ++ E S ++ L R F ++ + LD
Sbjct: 744 DVTLSYYNNLEKKDFTTHSDFIVFDEKSESDLAKITREILGRDKNTNVFKGDVENITDLD 803
Query: 99 LSSSMIGDDSVEM-VACVGANLRNLN----LSN-TRFSSAGVGILAG-----HLPNLEIL 147
LS I D ++ + G N+ +L SN T + G GIL G + L L
Sbjct: 804 LSKERIEKDGLKAKLQLTGDNIVDLEGIQYFSNLTSINLKGEGILKGIKNLMPIKTLVKL 863
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
L+G ++D ++ Y+ + SL+++ ++NT + G L L++L +L+ L
Sbjct: 864 DLAGREVD--SLDYIKYLKSLEYLYLNNTKLSG-------------GLLFLEDLTNLKAL 908
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
+L +SD ++ L KEL L L + D LSSL LT L D V
Sbjct: 909 DLSDNNISDISI--LKGLKELNKLYLGKNKIID-----LSSLEGLTKLVTLDLV 955
Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats.
Identities = 62/289 (21%), Positives = 129/289 (44%), Gaps = 49/289 (16%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT----FINEREAFLYIE 68
T V+ +P++ SL+ LN+SNC + +I E + + L + L+ ++ + Y++
Sbjct: 454 TKVSTIPDLVSLKELNISNCNVTNI-EFISSLSKLTYLCLSNVQIKGHILDNIDNIKYLK 512
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMV- 112
L +L ++ + + + ++ L+ LD++ +IG+++V
Sbjct: 513 N--LEYLSIAGTDVVNIDVVKELINLKKLDITGCTKINTEILSHLSNVEIIGNETVMFAD 570
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
+ +R L + I L ++ L LSG I D SM +L ++D
Sbjct: 571 KALEKEIREL------IKNYSEPIYKRQLSSITKLELSGKGIKDLQ-GLESMKDTLTYLD 623
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+SN +I +++L+ L +L +L L + ++ ++ P+ K L L
Sbjct: 624 LSNNEIS--------------DISSLKGLINLNKLVLHKNKI--GSIKPIEYLKSLKELD 667
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLD 280
L N + D++ L LS+LT L + ++ V++ + L + + L L +
Sbjct: 668 LSNNIIGDIT--ALGGLSQLTRLDLSKNGVVSIANLSGLENLQYLSLYE 714
Score = 42.7 bits (99), Expect = 0.28, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ ++ LNL N S L G +L N+ L +S I D ISY+ + SL+ +++
Sbjct: 160 SGIKELNLHNKNIKS-----LKGIEYLKNISNLDISDNHITD--ISYLRGLDSLEKLNLY 212
Query: 175 NTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
N DIK ++ + + V+ ++ L+NLN+LE L+L ++ + + L
Sbjct: 213 NNDIKDISAVSNLPKLKYLNMAKNEVIDISYLKNLNYLEHLDLRDNKIEN--IDSLEGKI 270
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
LI+L + N ++ D S +S L L +L
Sbjct: 271 SLIYLFMSNNNIGDFS--PISKLKYLKSL 297
>gi|325108218|ref|YP_004269286.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
gi|324968486|gb|ADY59264.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
Length = 1046
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 19/239 (7%)
Query: 49 KISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 107
+I G F+ +R+ + +E + + LD N + L+ +L + ++S I D
Sbjct: 286 QIRNRGGVFVGDRDLIIGVEKNTNPADLDWMNCNDDDVALLSDCPSLRRVYIASDAITDR 345
Query: 108 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG---TQIDDYAISYMSM 164
+ E++A LR++ L+ + + A + L+ EI+ L+G I + S ++
Sbjct: 346 AAELLADT-QQLRHIRLTGNQLTEASLRHLS--RCQAEIIELTGRGLKHIPNEIFSQLAK 402
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
+L+ + + +T A TD +L AL +L L L + Q++ A L L++
Sbjct: 403 SETLRDLRLWDT----------ALTDD--NLQALSSLTSLRVLCADGHQLTPAGLKQLAS 450
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L + L A+ TD ++ L L L + + D+ +TN+GL SL+ +DL G
Sbjct: 451 MPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQG 509
>gi|47097221|ref|ZP_00234784.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258612341|ref|ZP_05711837.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
gi|47014407|gb|EAL05377.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258611023|gb|EEW23631.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
Length = 778
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL ++ N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLMELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 704 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
++ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
>gi|449087282|ref|YP_007419723.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449021039|gb|AGE76202.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 991
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|46446666|ref|YP_008031.1| hypothetical protein pc1032 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400307|emb|CAF23756.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 734
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 149/309 (48%), Gaps = 39/309 (12%)
Query: 5 LSFLNLAW------TGVTKLPNISSLECLNLSNCT------------IDSILEGNENKAP 46
L L+L+W G+ L +++L+ LNL+ C + + N N+
Sbjct: 301 LQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRC- 359
Query: 47 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIG 105
++ AG + + A ++ S ++++ L+ LT + AL+HLDLS + +
Sbjct: 360 -KDLTDAGLSHLKPLTALQHLNLS--ECWKLTDAGLAH---LTPLTALQHLDLSRCNSLT 413
Query: 106 DDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMS 163
D + + + A L++L+LS+ + F+ AG+ L L L+ L+LS + + D +++++
Sbjct: 414 DAGLAHLTPLTA-LQHLDLSDCQNFTDAGLAHLTS-LTGLQYLNLSEYKNLTDAGLAHLT 471
Query: 164 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 223
+ +L+ +++ N + F A + LTALQ+L+ NL T A L PL+
Sbjct: 472 PLTALQHLNLCN--CRKFTDNGLAH---LTPLTALQHLDLSHCKNL--TDDGLAHLAPLT 524
Query: 224 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ L+ LS + LTD L L+ L+ L L + +T++GL P L+ L L
Sbjct: 525 GLQRLV-LSWCD-KLTDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVY 582
Query: 284 GWLLTEDAI 292
W LT+ +
Sbjct: 583 CWQLTDAGL 591
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 147/317 (46%), Gaps = 50/317 (15%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI-SLAGTTFINERE------AFLY 66
G+ L +++L+ L+LS+C N A LA + SL G ++N E A L
Sbjct: 416 GLAHLTPLTALQHLDLSDCQ-------NFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLA 468
Query: 67 IETSLLSFLDVSNSSLSRF-----CFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLR 120
T L + ++ + +F LT + AL+HLDLS + DD + +A + L+
Sbjct: 469 HLTPLTALQHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPL-TGLQ 527
Query: 121 NLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI------DI 173
L LS + + AG+ L L L+ L LS +I D +++++ + L+ + +
Sbjct: 528 RLVLSWCDKLTDAGLAHLTP-LTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQL 586
Query: 174 SNTDIKG----------FIQQVGAETDLVLS----LTALQNLNHLERLNLEQTQVSDATL 219
++ + ++ TD L+ LTALQ+L LN + +++D L
Sbjct: 587 TDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHL----ALN-DCRKLTDTGL 641
Query: 220 FPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 278
L+ L HL+L R LTD L L L+ L L + +T++GL +L+
Sbjct: 642 AHLTPLTALQHLTLNRCEKLTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQR 701
Query: 279 LDLHGGWLLTEDAILQF 295
LDL+G +T+D + +F
Sbjct: 702 LDLYGRE-ITDDGLERF 717
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 20/218 (9%)
Query: 72 LSFLDVSNS---SLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT 127
L +LD+S+ + LT + L+HLDLS S + D + + + A L++LNL+
Sbjct: 276 LQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTA-LQHLNLNRC 334
Query: 128 RF-SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
+ AG+ L L L+ L+L+ + + D +S++ + +L+ +++S +
Sbjct: 335 EYLKDAGLAHLTP-LTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSEC-----WKLT 388
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLH 244
A + LTALQ+L+ L R N ++DA L L+ L HL L + + TD L
Sbjct: 389 DAGLAHLTPLTALQHLD-LSRCN----SLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLA 443
Query: 245 QLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 281
L+SL+ L L++ + LT++GL P +L+ L+L
Sbjct: 444 HLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLNL 481
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 32/258 (12%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA-----------KISLAGTTFINERE 62
G+ L +++L+ L+LS+C + +G + APL K++ AG +
Sbjct: 491 GLAHLTPLTALQHLDLSHCK-NLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLT 549
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
A Y++ LS +++++ L+ LT + L+HL L D+ L+ L
Sbjct: 550 ALQYLD---LSCCEITDAGLAH---LTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYL 603
Query: 123 NL-SNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKG 180
L S R + AG+ LA L L+ L+L+ ++ D +++++ + +L+ + ++ +
Sbjct: 604 YLGSCNRLTDAGLAHLAP-LTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCE--- 659
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
TD L L+ L L+ L+L +++DA L L+ L L L +TD
Sbjct: 660 ------KLTDD--GLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITD 711
Query: 241 VSLHQLSSLSKLTNLSIR 258
L + +L+ NL IR
Sbjct: 712 DGLERFETLAASFNLEIR 729
>gi|343416403|emb|CCD20380.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 1256
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 27/296 (9%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T V+ L + SLE LNL++CT I+ G L + +N +AFL T
Sbjct: 551 TDVSPLARMRSLEILNLNDCT--GIVRGLHVLCGLTTLQKLCLANVNVDDAFLRDLTCHE 608
Query: 73 SFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
++S +S +R L +M++LE+LDL+ G V C L+ L L
Sbjct: 609 RLRELSLNSCTRITDVSPLARMRSLENLDLNDC-TGIVRGLHVLCGLTTLQELCLRQLSV 667
Query: 130 SSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
A + L H L LSL S T+I D +S ++ M SL+ +D++
Sbjct: 668 DDAFLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEILDLNGC------------ 712
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLS 247
T +V L L L L+ L L V DA + L+ + L LSL + + +TDVS L+
Sbjct: 713 TGIVRGLHVLCGLTTLQELCLANVNVDDAFVRDLTCHERLRRLSLNSCTRITDVS--PLA 770
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 303
+ L L++ D GL +L+ +L+ + +DA L+ H R+
Sbjct: 771 RMRSLEMLNLNDCTGIVRGLHELCGLTTLQ--ELYLPKVYVDDAFLRDLTCHERLR 824
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 127/304 (41%), Gaps = 45/304 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T V+ L + SLE L+L++CT I+ G L + +N +AFL T
Sbjct: 906 TDVSPLARMRSLEMLDLNDCT--GIVRGLHELCGLTTLQELCLANVNVDDAFLRDLTCHE 963
Query: 73 SFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
++S +S +R L +M++LE LDL+ G V C L+ L L
Sbjct: 964 RLRELSLNSCTRITDVSPLARMRSLEKLDLNGC-TGIVRGLHVLCGLTTLQELYLRQMSV 1022
Query: 130 SSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
A + L H L LSL S T+I D +S ++ M SL+ N D+ G
Sbjct: 1023 DDALLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLE-----NMDLNGC------- 1067
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS----- 242
T +V L L L L+ L L Q V DA L L+ + L LSL + + +TDVS
Sbjct: 1068 TGIVRGLHVLCGLTTLQELYLRQMSVDDAFLRDLTCHERLRKLSLNSCTRITDVSPLARM 1127
Query: 243 -----------------LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 285
LH L L+ L L +R + ++ L L+ L L+
Sbjct: 1128 RSLEMLDLNGCTGIVRGLHVLCGLTTLQELYLRQMCVDDAFLRDLTCHERLRRLSLNSCT 1187
Query: 286 LLTE 289
+T+
Sbjct: 1188 RITD 1191
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T V+ L + SLE LNL+ CT I+ G L + ++ +AFL T
Sbjct: 835 TDVSPLARMRSLEMLNLNGCT--GIVRGLHELCGLTTLQELYLRQMSVDDAFLRDLTCHE 892
Query: 73 SFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNL 124
+S +S +R L +M++LE LDL +D +V C L+ L L
Sbjct: 893 RLRRLSLNSCTRITDVSPLARMRSLEMLDL------NDCTGIVRGLHELCGLTTLQELCL 946
Query: 125 SNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
+N A + L H L LSL S T+I D +S ++ M SL+ +D++
Sbjct: 947 ANVNVDDAFLRDLTCH-ERLRELSLNSCTRITD--VSPLARMRSLEKLDLNGC------- 996
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS 242
T +V L L L L+ L L Q V DA L L+ + L LSL + + +TDVS
Sbjct: 997 -----TGIVRGLHVLCGLTTLQELYLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVS 1051
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 302
L+ + L N+ + GL +L+ +L+ + +DA L+ H R+
Sbjct: 1052 --PLARMRSLENMDLNGCTGIVRGLHVLCGLTTLQ--ELYLRQMSVDDAFLRDLTCHERL 1107
Query: 303 E 303
Sbjct: 1108 R 1108
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 128/296 (43%), Gaps = 27/296 (9%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T V+ L + SLE L+L+ CT I+ G L + ++ +A L T
Sbjct: 409 TDVSPLARMRSLEMLDLNGCT--GIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCHE 466
Query: 73 SFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
++S +S +R L +M++LE LDL+ G C L+ L L
Sbjct: 467 RLRELSLNSCTRITDVSPLARMRSLEMLDLNGC-TGIVRGLHELCGLTTLQELYLRQMSV 525
Query: 130 SSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
A + L H L LSL S T+I D +S ++ M SL+ +++++
Sbjct: 526 DDALLRDLTCH-ERLRELSLNSCTRITD--VSPLARMRSLEILNLNDC------------ 570
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLS 247
T +V L L L L++L L V DA L L+ + L LSL + + +TDVS L+
Sbjct: 571 TGIVRGLHVLCGLTTLQKLCLANVNVDDAFLRDLTCHERLRELSLNSCTRITDVS--PLA 628
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 303
+ L NL + D GL +L+ L L L +DA L+ H R+
Sbjct: 629 RMRSLENLDLNDCTGIVRGLHVLCGLTTLQELCLR--QLSVDDAFLRDLTCHERLR 682
>gi|325111037|ref|YP_004272105.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
gi|324971305|gb|ADY62083.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
Length = 407
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L ++ L+ L + +S + +D ++ LR+L+LS R + +P L +L
Sbjct: 166 LASLRQLQRLKVPTSKLSEDGFALLCTRMPFLRSLDLSGRRGVANSWLTHLAKMPRLNVL 225
Query: 148 SLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDL-VLSLT-----ALQ 199
+S IDD AI ++ +P+LK++ + T I G F +G T+L LSL A Q
Sbjct: 226 GVSFAKNIDDDAIPLLAGLPALKWLSLEGTSITGMFPAALGNLTNLDTLSLAHCTFNAPQ 285
Query: 200 NLNHLERL-NLEQTQVSDA-TLFPLSTFKELIHL---SLRNASLTDVSLHQL 246
L L +L +L+Q ++D + L + + HL L+N +LTD L +L
Sbjct: 286 TLESLSKLRSLKQLNLNDCKNITSLKFLRGMSHLEAIGLKNTNLTDAILKEL 337
>gi|87310922|ref|ZP_01093048.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87286437|gb|EAQ78345.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 897
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 23/172 (13%)
Query: 70 SLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
S L+ +DV S L L L L+++ + D+ + ++ + + L++L+L +T
Sbjct: 727 SQLTHVDVRYSQFDGGNVIVLQNSPELIELHLTNTNVQDEDLALLTGL-SKLQHLHLYDT 785
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
R S AG+ + G L ++ILS+ T+I D I++++ + L+ ++ SNT++
Sbjct: 786 RISDAGLAQI-GKLTKMKILSIDKTEITDKGIAHLTTLHDLEVLNASNTNL--------- 835
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
TD +S+ L L L+RL ++ TQ++ + E +H +L + +T
Sbjct: 836 -TD--VSVNHLAQLPRLQRLQVQGTQITRQAI-------EKLHAALPDCVIT 877
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
++ LQN L L+L T V D L L+ +L HL L + ++D L Q+ L+K+
Sbjct: 743 NVIVLQNSPELIELHLTNTNVQDEDLALLTGLSKLQHLHLYDTRISDAGLAQIGKLTKMK 802
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLD 280
LSI +T+ G+ L++L+
Sbjct: 803 ILSIDKTEITDKGIAHLTTLHDLEVLN 829
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
+L+ L +++ +Q + L ELI L L N ++ D L L+ LSKL +L + D
Sbjct: 725 DLSQLTHVDVRYSQFDGGNVIVLQNSPELIELHLTNTNVQDEDLALLTGLSKLQHLHLYD 784
Query: 260 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
++++GL +K+L + +T+ I +H
Sbjct: 785 TRISDAGLAQIGKLTKMKILSIDKT-EITDKGIAHLTTLH 823
>gi|228984504|ref|ZP_04144681.1| Internalin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775207|gb|EEM23596.1| Internalin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 766
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTPLVKMDHLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK- 390
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 391 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKELHLPNNELKD 437
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M +L +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DHLESLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 374 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|47566217|ref|ZP_00237245.1| Rab family protein [Bacillus cereus G9241]
gi|47556770|gb|EAL15101.1| Rab family protein [Bacillus cereus G9241]
Length = 755
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 271
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 272 SDVTPLVKMDHLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 328
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 329 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK- 379
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 380 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKELHLPNNELKD 426
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 427 IT--PLSSLVNLQKLDLE 442
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M +L +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DHLESLDLSNNKI 293
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 294 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 363 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|407859465|gb|EKG07051.1| hypothetical protein TCSYLVIO_001824 [Trypanosoma cruzi]
Length = 929
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 346 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE 405
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
+ + A L L +L+L + + D +++ + P L +D+ Q G T L
Sbjct: 406 SLQWLRA--LNQLRVLNLGYSSVTDDSLTALRFCPELAKLDL---------QWCGRITSL 454
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ AL + L LNL +T V+D L PL F L +SL L+ L +L++
Sbjct: 455 KYLVGAL--CDSLRELNLTETSVTDEGLVPLKDFAALELISLEGCGAVS-DLNVLCNLTR 511
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
L + + +TN G+ S ++L+++ + + LT+
Sbjct: 512 LREMDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTD 549
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 148
T+ L L L + D + + C ++R L L NT +S +G+L ++E LS
Sbjct: 290 TRRIVLRELFLHGQQVSDVTPFLPHCT--DVRALVLRNTHLTSEKLGLLPQKCRHVERLS 347
Query: 149 L---------------SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
L S + D +SY + + D+S + + G +
Sbjct: 348 LCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRK--IE 405
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKL 252
SL L+ LN L LNL + V+D +L L EL L L+ +T + + L
Sbjct: 406 SLQWLRALNQLRVLNLGYSSVTDDSLTALRFCPELAKLDLQWCGRITSLKYLVGALCDSL 465
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L++ + +T+ GL K +L+L+ L G
Sbjct: 466 RELNLTETSVTDEGLVPLKDFAALELISLEG 496
>gi|290972233|ref|XP_002668860.1| predicted protein [Naegleria gruberi]
gi|284082393|gb|EFC36116.1| predicted protein [Naegleria gruberi]
Length = 296
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+++ + L HL ++ + IGD+ + + + L +L++ + + S GV + G L NL
Sbjct: 69 YISSLNQLTHLSININNIGDEGAKYIGQI-KQLTDLSICDNKIGSEGVKYI-GQLKNLLK 126
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLS-------- 194
L +S +I D ++S M L +DIS+ +I +I ++ DL++S
Sbjct: 127 LYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHLIDLMISDNNIDSMG 186
Query: 195 --------LTALQNLNH------------LERL-NLE--QTQVSDATLFPLSTFKELIHL 231
LT+L+ N+ +E+L NLE + ++ D + LS K+L L
Sbjct: 187 AKHISQMKLTSLEVYNNTIDVEGAKYLSEMEQLTNLEISKNEIGDKGVQFLSGMKQLTSL 246
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ ++DV + + L +LS+ D ++ + + + L LD+
Sbjct: 247 DINENKISDVGAKYILEMKNLIDLSVFDNEISEDIIERLREMKQLTYLDI 296
>gi|12581504|gb|AAG59625.1| GU1 [Trypanosoma brucei]
gi|261333153|emb|CBH16148.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 846
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 45/253 (17%)
Query: 87 FLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
F++ + +L LDL + +GD V C L+ L LS R S V LA L L
Sbjct: 340 FISSLGSLVELDLRDNWVGDAGCASFVHC--RQLQQLKLSCCRRVS-DVRWLAA-LTCLR 395
Query: 146 ILSLSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDI---- 178
L LS T + D +S++S + LK +D+S TDI
Sbjct: 396 TLDLSHTNVRSRWLESLRACRYLVELNVAYCRDVVEVSFLSELRLLKHLDLSGTDIGEQN 455
Query: 179 -------KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+G + + V L L+ L L +L+ E+T + DA + + K+L L
Sbjct: 456 LDPIGQCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFL 515
Query: 232 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
S R LTDV L L L L + +TN G+ S SL+ +D+ L+T
Sbjct: 516 SFRYCHLLTDVKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITH- 572
Query: 291 AILQFCKMHPRIE 303
L+F + P ++
Sbjct: 573 --LEFLRPLPNLQ 583
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 34/226 (15%)
Query: 72 LSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRF 129
L+FL + + SS+ FL ++ L LD + I D +V ++VAC + L + R+
Sbjct: 465 LTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVAC-----KKLEFLSFRY 519
Query: 130 SS--AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
V L G L NL+ L L+GT + + IS + SL+++D+S
Sbjct: 520 CHLLTDVKCLEG-LRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVS------------- 565
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDA---TLFPLSTFKELIHLSLRNASLTDVSLH 244
E L+ L L+ L +L+++ +Q ++D T P S + ++ S R ++ +V
Sbjct: 566 ECCLITHLEFLRPLPNLQQVVADQMNLTDIGGLTGAP-SLRRVTLNESKRLGTVGEV--- 621
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGGWLLTE 289
L L LS+R + ++N+G+ S RSL+ LD+ +TE
Sbjct: 622 ---RLPYLQELSLRKSTISNAGIRSLLASCRSLQHLDMQHCHSVTE 664
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 57/276 (20%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE---------------------GNEN 43
L+ N+ G++ LP SLE +++S C + + LE G
Sbjct: 540 LAGTNVTNEGISSLPKCVSLEYVDVSECCLITHLEFLRPLPNLQQVVADQMNLTDIGGLT 599
Query: 44 KAP-LAKISLAGTTFINEREAFLYIETSLLSFLD--------VSNSSLSRFCFLTQMKAL 94
AP L +++L NE + + L +L +SN+ + L ++L
Sbjct: 600 GAPSLRRVTL------NESKRLGTVGEVRLPYLQELSLRKSTISNAGIRSL--LASCRSL 651
Query: 95 EHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 152
+HLD+ SV ++ + NLR L L N R + + +A + NL L ++
Sbjct: 652 QHLDMQHC----HSVTELSALSQLPNLRELLLRNIRVTGEFMTHIASCV-NLRKLQMTEC 706
Query: 153 QIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQQVG------AETDLVLSLTALQNL 201
D ++ +S + SL+ ID+S T IKG + +E V ++ L L
Sbjct: 707 A-DITDVNCLSALQSLEDIDLSRTSVTTEGIKGLSKCYALRKLNLSECRYVTNVNCLGKL 765
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
L L+LE+T V+D + LS +L L+L S
Sbjct: 766 PFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCS 801
>gi|71748370|ref|XP_823240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832908|gb|EAN78412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 846
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 45/253 (17%)
Query: 87 FLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
F++ + +L LDL + +GD V C L+ L LS R S V LA L L
Sbjct: 340 FISSLGSLVELDLRDNWVGDAGCASFVHC--RQLQQLKLSCCRRVS-DVRWLAA-LTCLR 395
Query: 146 ILSLSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDI---- 178
L LS T + D +S++S + LK +D+S TDI
Sbjct: 396 TLDLSHTNVRSRWLESLRACRYLVELNVAYCRDVVEVSFLSELRLLKHLDLSGTDIGEQN 455
Query: 179 -------KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+G + + V L L+ L L +L+ E+T + DA + + K+L L
Sbjct: 456 LDPIGRCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFL 515
Query: 232 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
S R LTDV L L L L + +TN G+ S SL+ +D+ L+T
Sbjct: 516 SFRYCHLLTDVKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITH- 572
Query: 291 AILQFCKMHPRIE 303
L+F + P ++
Sbjct: 573 --LEFLRPLPNLQ 583
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 34/226 (15%)
Query: 72 LSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRF 129
L+FL + + SS+ FL ++ L LD + I D +V ++VAC + L + R+
Sbjct: 465 LTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVAC-----KKLEFLSFRY 519
Query: 130 SS--AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
V L G L NL+ L L+GT + + IS + SL+++D+S
Sbjct: 520 CHLLTDVKCLEG-LRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVS------------- 565
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDA---TLFPLSTFKELIHLSLRNASLTDVSLH 244
E L+ L L+ L +L+++ +Q ++D T P S + ++ S R ++ +V
Sbjct: 566 ECCLITHLEFLRPLPNLQQVVADQMNLTDIGGLTGAP-SLRRVTLNESKRLGTVGEV--- 621
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGGWLLTE 289
L L LS+R + ++N+G+ S RSL+ LD+ +TE
Sbjct: 622 ---RLPYLQELSLRKSTISNAGIRSLLASCRSLQHLDMQHCHSVTE 664
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 57/276 (20%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE---------------------GNEN 43
L+ N+ G++ LP SLE +++S C + + LE G
Sbjct: 540 LAGTNVTNEGISSLPKCVSLEYVDVSECCLITHLEFLRPLPNLQQVVADQMNLTDIGGLT 599
Query: 44 KAP-LAKISLAGTTFINEREAFLYIETSLLSFLD--------VSNSSLSRFCFLTQMKAL 94
AP L +++L NE + + L +L +SN+ + L ++L
Sbjct: 600 GAPSLRRVTL------NESKRLGTVGEVRLPYLQELSLRKSTISNAGIRSL--LASCRSL 651
Query: 95 EHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 152
+HLD+ SV ++ + NLR L L N R + + +A + NL L ++
Sbjct: 652 QHLDMQHC----HSVTELSALSQLPNLRELLLRNIRVTGEFMTHIASCV-NLRKLQMTEC 706
Query: 153 QIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQQVG------AETDLVLSLTALQNL 201
D ++ +S + SL+ ID+S T IKG + +E V ++ L L
Sbjct: 707 A-DITDVNCLSALQSLEDIDLSRTSVTTEGIKGLSKCYALRKLNLSECRYVTNVNCLGKL 765
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
L L+LE+T V+D + LS +L L+L S
Sbjct: 766 PFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCS 801
>gi|196046515|ref|ZP_03113740.1| putative internalin [Bacillus cereus 03BB108]
gi|196022699|gb|EDX61381.1| putative internalin [Bacillus cereus 03BB108]
Length = 759
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 385
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ ++ + LE L + + +++D T PLS +L L L N L D++
Sbjct: 386 -----------DLSGIEQMKQLEELWIGKNEITDVT--PLSKMTQLKELHLPNNELKDIT 432
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 367 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 397
>gi|423422719|ref|ZP_17399750.1| hypothetical protein IE5_00408, partial [Bacillus cereus BAG3X2-2]
gi|401118704|gb|EJQ26533.1| hypothetical protein IE5_00408, partial [Bacillus cereus BAG3X2-2]
Length = 815
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|423507131|ref|ZP_17483714.1| hypothetical protein IG1_04688, partial [Bacillus cereus HD73]
gi|402444993|gb|EJV76870.1| hypothetical protein IG1_04688, partial [Bacillus cereus HD73]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|376265270|ref|YP_005117982.1| internalin [Bacillus cereus F837/76]
gi|364511070|gb|AEW54469.1| internalin, putative [Bacillus cereus F837/76]
Length = 759
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 385
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
L+ ++ + LE L + + +++D T PLS +L L L N L D++
Sbjct: 386 -----------DLSGIEQMKQLEELWIGKNEITDVT--PLSKMTQLKELHLPNNELKDIT 432
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 367 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 397
>gi|327307482|ref|XP_003238432.1| F-box protein [Trichophyton rubrum CBS 118892]
gi|326458688|gb|EGD84141.1| F-box protein [Trichophyton rubrum CBS 118892]
Length = 774
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 119 LRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISN 175
L++LNLSN R + GV ILA ++P LE L LS T DD S ++ P L+FI+
Sbjct: 422 LKHLNLSNCRHLTENGVKILAHNVPELEGLHLSFLSTLTDDCIASIINTTPKLRFIE--- 478
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQ-VSDATLFP-LSTFKELIHLS 232
++++G T+ V++ A + + LE LN+ + + D + P L L L
Sbjct: 479 ------LEELGELTNYVITELARASCSQTLEHLNISFCENIGDTGILPLLRKCPSLRSLD 532
Query: 233 LRNASLTDVSLHQLSS 248
L N ++D++L ++ S
Sbjct: 533 LDNTRISDLTLMEICS 548
>gi|290971847|ref|XP_002668685.1| predicted protein [Naegleria gruberi]
gi|284082182|gb|EFC35941.1| predicted protein [Naegleria gruberi]
Length = 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 72 LSFLDVSNS--SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+FL VS + + +++Q+K L +LD+ + IGD+ + ++ + L+NL + N
Sbjct: 132 LTFLGVSGNFVGVEGAKYISQLKQLTNLDICFNNIGDEGAKHISEL-KQLKNLKIGNNYI 190
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
G ++ L +L LS+S + + Y+S M L ++I + I GA+
Sbjct: 191 GVEGAKYIS-QLKHLTKLSISYNNVRVEGVKYISEMKQLTDLNIG----ENVIGDEGAK- 244
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
++ LN L RL++ ++S+A + K+L L+++N ++ +
Sbjct: 245 -------HIKKLNQLTRLSISGVEISEAGAKYICEMKQLTQLNIKNNNIGKIG 290
>gi|402553188|ref|YP_006594459.1| internalin [Bacillus cereus FRI-35]
gi|401794398|gb|AFQ08257.1| internalin [Bacillus cereus FRI-35]
Length = 760
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPIVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPIVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|261329243|emb|CBH12222.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 543
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
C LT L +DLS + D VE +A + L +++S G+G L G LP L
Sbjct: 175 LCGLTLSNTLRRIDLSECLRLTD-VEPLASI-ETLEEIDVSGCFPCVCGIGAL-GALPRL 231
Query: 145 EILSLSGTQIDDYAISYMSMMPSLK---------FIDISNTDIKGFIQQVG-AETDLVLS 194
+IL+ S T I D ++ +S SLK ++S D +Q++ AE V+S
Sbjct: 232 KILNASLTGITDECLARLSASQSLKKLLLSKCERLTNVSRLDTVTTLQELDLAECKNVVS 291
Query: 195 -LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKL 252
+ +L L L+ L+L T V+D L LS + L ++ LT+VS L L L
Sbjct: 292 GIGSLGTLPVLQCLDLSGTGVADDDLCTLSCSATISKLIMKRCVLLTNVS--PLEKLRTL 349
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++I + + GL SF SL+ L +H
Sbjct: 350 QHVNIGECINVIEGLNSFSELPSLRTLYMH 379
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQ-QVGAETDL- 191
G LP + L ++ T + D + +++ +L+ ID+S TD++ + E D+
Sbjct: 154 VGRLPRVHTLMVNRTGVIDEFLCGLTLSNTLRRIDLSECLRLTDVEPLASIETLEEIDVS 213
Query: 192 -----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQ 245
V + AL L L+ LN T ++D L LS + L L L + LT+VS +
Sbjct: 214 GCFPCVCGIGALGALPRLKILNASLTGITDECLARLSASQSLKKLLLSKCERLTNVS--R 271
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
L +++ L L + + SG+GS L+ LDL G + +D
Sbjct: 272 LDTVTTLQELDLAECKNVVSGIGSLGTLPVLQCLDLSGTGVADDD 316
>gi|72391044|ref|XP_845816.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62176443|gb|AAX70551.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70802352|gb|AAZ12257.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 543
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
C LT L +DLS + D VE +A + L +++S G+G L G LP L
Sbjct: 175 LCGLTLSNTLRRIDLSECLRLTD-VEPLASI-ETLEEIDVSGCFPCVCGIGAL-GALPRL 231
Query: 145 EILSLSGTQIDDYAISYMSMMPSLK---------FIDISNTDIKGFIQQVG-AETDLVLS 194
+IL+ S T I D ++ +S SLK ++S D +Q++ AE V+S
Sbjct: 232 KILNASLTGITDECLARLSASQSLKKLLLSKCERLTNVSRLDTVTTLQELDLAECKNVVS 291
Query: 195 -LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKL 252
+ +L L L+ L+L T V+D L LS + L ++ LT+VS L L L
Sbjct: 292 GIGSLGTLPVLQCLDLSGTGVADDDLCALSCSATISKLIMKRCVLLTNVS--PLEKLRTL 349
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++I + + GL SF SL+ L +H
Sbjct: 350 QHVNIGECINVIEGLNSFSELPSLRTLYMH 379
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQ-QVGAETDL- 191
G LP + L ++ T + D + +++ +L+ ID+S TD++ + E D+
Sbjct: 154 VGRLPRVHTLMVNRTGVIDEFLCGLTLSNTLRRIDLSECLRLTDVEPLASIETLEEIDVS 213
Query: 192 -----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQ 245
V + AL L L+ LN T ++D L LS + L L L + LT+VS +
Sbjct: 214 GCFPCVCGIGALGALPRLKILNASLTGITDECLARLSASQSLKKLLLSKCERLTNVS--R 271
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
L +++ L L + + SG+GS L+ LDL G + +D
Sbjct: 272 LDTVTTLQELDLAECKNVVSGIGSLGTLPVLQCLDLSGTGVADDD 316
>gi|423454102|ref|ZP_17430955.1| hypothetical protein IEE_02846 [Bacillus cereus BAG5X1-1]
gi|423468774|ref|ZP_17445518.1| hypothetical protein IEM_00080 [Bacillus cereus BAG6O-2]
gi|401137072|gb|EJQ44656.1| hypothetical protein IEE_02846 [Bacillus cereus BAG5X1-1]
gi|402440125|gb|EJV72118.1| hypothetical protein IEM_00080 [Bacillus cereus BAG6O-2]
Length = 510
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVG---------A 187
HL +LE +++ T ++D +S + MPSLK +DISNTDIK F + Q +
Sbjct: 304 AHLQHLEEMNIKKTSVND--LSALVEMPSLKKLDISNTDIKDFSLLPQFRKLESLSVHIS 361
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
+ +++++ + L HL L LE V++ L L +LI + N S+ D + +
Sbjct: 362 NREQLIAISKINTLKHLRILGLE--NVNEVELLVLQNLNKLITIEFEN-SIVD-NFNCFK 417
Query: 248 SLSKLTNLSIRDAVLTNSG-LGSFKPPRSLKLLDLHGG 284
+ L N+ ++D + N LG K LK L+L G
Sbjct: 418 DNTALQNIKLKDTNVKNGNVLGRLK---GLKELELDGA 452
>gi|229195625|ref|ZP_04322391.1| Internalin [Bacillus cereus m1293]
gi|228587874|gb|EEK45926.1| Internalin [Bacillus cereus m1293]
Length = 772
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTTLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 392
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 393 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 437
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTTLVKM-----DNLDSLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 374 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 404
>gi|289433761|ref|YP_003463633.1| hypothetical protein lse_0394 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170005|emb|CBH26545.1| leucine-rich repeat, cell wall anchor family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 1770
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 143/320 (44%), Gaps = 59/320 (18%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+ +L + +NC I+ L EN L + L+G + + +A + L
Sbjct: 348 ITDLKNLPNLTNITANNCIIED-LGTLENLPKLQTLILSGNENLTDVDAI--NDLPQLKT 404
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
+ + ++ L + LE LD+ + + D S E+ L L+ S + ++ +
Sbjct: 405 VALDGCGITNIGTLENLPKLEKLDIKGNKVTDIS-EITDL--PRLSYLDASENQLTT--I 459
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------------- 181
G LA LP L+ L++S Q+ D +S ++ PSL +I++SN I F
Sbjct: 460 GTLA-KLPLLDWLNISENQLKD--VSTINNFPSLNYINVSNNSITTFGKMTELPSLKEFY 516
Query: 182 -----------------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL---FP 221
++++ +L+ +L +NL L+ L++ ++++ T+ FP
Sbjct: 517 GQFNKVTDISMIHDMPNLRKLNVSNNLINNLGTFENLPKLQNLDIHSNKITNTTVIHDFP 576
Query: 222 -LSTFKELIHL--------SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG------ 266
L T+ +L +L + ++S +++ SL + +L D +L NS
Sbjct: 577 SLETYDASSNLISTLGTMDNLPEVTTINLSSNRIPSLEPIGDLPKLDTLLVNSNSSYLRT 636
Query: 267 LGSFKPPRSLKLLDLHGGWL 286
+GS +L++L+L+ ++
Sbjct: 637 VGSLDGLPALRILELNSNYI 656
>gi|407410013|gb|EKF32614.1| hypothetical protein MOQ_003536 [Trypanosoma cruzi marinkellei]
Length = 835
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 114 CVGANLRNLNLSNTRFSSAGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
C +LR L+LS T SA + +L L L + S SG + +S++ + SLK +
Sbjct: 378 CALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVK----DVSFVEGLLSLKHL 433
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL------------EQTQVSDATL 219
D+++T IK Q L+ +LQ+ L ++ E T+V DA +
Sbjct: 434 DLTDTSIKDAGTQ-SLRKCTALTFLSLQDCRFLTDIHFVEPLNNLLSLNLEGTEVVDANI 492
Query: 220 FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 278
PL +L LSLR+ LTDV L L L +L + +T+ G+ SL+
Sbjct: 493 IPLMHCTKLELLSLRHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGISDVSQCISLER 550
Query: 279 LDLHGGWLLT 288
+DL L+T
Sbjct: 551 IDLSECCLIT 560
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L+ +K LE L L S SVE V C+ L L+L+ R + G LA + ++ L
Sbjct: 307 LSNLKNLEQLRLVS-FNRLSSVEPVVCLD-KLLELDLTENRVTDEGCAALA-NCGQIQKL 363
Query: 148 SLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
+L+ + + D + ++ + SL+F+D+S T ++ DL L LT Q
Sbjct: 364 TLASCRCVSD--VRWICALTSLRFLDLSKTHVRS--------ADLQL-LTVCQ------- 405
Query: 207 LNLEQTQVSDATLFPLSTFKE----LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
LE+ V+ + +F E L HL L + S+ D L + LT LS++D
Sbjct: 406 -RLEELHVASCSGVKDVSFVEGLLSLKHLDLTDTSIKDAGTQSLRKCTALTFLSLQDC 462
>gi|290996590|ref|XP_002680865.1| predicted protein [Naegleria gruberi]
gi|284094487|gb|EFC48121.1| predicted protein [Naegleria gruberi]
Length = 304
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 60 EREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
E E+ Y++ + L L+ S S L++MK+L L L+ ++ +E ++ + +
Sbjct: 95 EAESVAYLKKLTNLKELNCSPDSYGTSAHLSEMKSLNSLILNVKYNKEEDIENISKLTS- 153
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L +L L N+ +S G L+ ++ + L+LSG I D + + + +L F+++S +
Sbjct: 154 LNHLKLWNSNINSKGAEFLS-NISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSYNGL 212
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
+T L NL L LNL + D +S F L +L LRN +
Sbjct: 213 SDS------------GITNLGNLRKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQI 260
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVL 262
T + LS+L+ L +L +R+ L
Sbjct: 261 TKNGANYLSNLNSLYSLDLRENKL 284
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
++++MK LE L L + +SV + + NL+ LN S + ++ HL +
Sbjct: 75 IVYISEMKLLESLILGELRLEAESVAYLKKL-TNLKELNCSPDSYGTSA------HLSEM 127
Query: 145 E-----ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KG--FIQQVGAETDLVLS- 194
+ IL++ + +D I +S + SL + + N++I KG F+ + + T L LS
Sbjct: 128 KSLNSLILNVKYNKEED--IENISKLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSG 185
Query: 195 -------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L + L +L LNL +SD+ + L ++L L+L ++ D +S
Sbjct: 186 NVIRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIIS 245
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
S L L +R+ +T +G SL LDL
Sbjct: 246 KFSHLKYLQLRNNQITKNGANYLSNLNSLYSLDL 279
>gi|196040684|ref|ZP_03107983.1| internalin [Bacillus cereus NVH0597-99]
gi|196028474|gb|EDX67082.1| internalin [Bacillus cereus NVH0597-99]
Length = 644
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 62
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDIT--PLSKMTQLKELHLPNNELKDIT 432
Query: 243 LHQLSSLSKLTNLSIR 258
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L + D VLT + + +K L+
Sbjct: 367 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 397
>gi|423371410|ref|ZP_17348750.1| hypothetical protein IC5_00466 [Bacillus cereus AND1407]
gi|401103236|gb|EJQ11221.1| hypothetical protein IC5_00466 [Bacillus cereus AND1407]
Length = 766
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|302654862|ref|XP_003019229.1| F-box domain protein [Trichophyton verrucosum HKI 0517]
gi|291182938|gb|EFE38584.1| F-box domain protein [Trichophyton verrucosum HKI 0517]
Length = 774
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 119 LRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISN 175
L++LNLSN R + GV ILA ++P LE L LS T DD S ++ P L+FI+
Sbjct: 422 LKHLNLSNCRLLTENGVKILAHNVPELEGLHLSFLSTLTDDCIASIINTTPKLRFIE--- 478
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQ-VSDATLFP-LSTFKELIHLS 232
++++G T+ V++ A + LE LN+ + + D + P L L L
Sbjct: 479 ------LEELGELTNFVITELARAACSQTLEHLNISFCENIGDTGILPLLRKCPSLRSLD 532
Query: 233 LRNASLTDVSLHQLSS 248
L N ++D++L ++ S
Sbjct: 533 LDNTRISDLTLMEICS 548
>gi|283779449|ref|YP_003370204.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
gi|283437902|gb|ADB16344.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
Length = 633
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
LSL T + D ++ + LK++D+S T + TD T L+ L+ L +
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKV----------TD-----TGLEQLDQLTQ 522
Query: 207 LN---LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
LN LE T +S A++ ++ + L L L ++ D L ++++L +L L + +T
Sbjct: 523 LNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVT 582
Query: 264 NSGLGSFKPPRSLKLLDLHG 283
++GL ++L++LDL G
Sbjct: 583 DAGLAKLVSLQNLEMLDLRG 602
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
FL+ + S + + +++ LE LDLS I DD + +A + L+ L L T + AG
Sbjct: 527 FLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATL-KQLKVLYLVGTPVTDAG 585
Query: 134 VGILAGHLPNLEILSLSGTQI 154
+ L L NLE+L L GT++
Sbjct: 586 LAKLVS-LQNLEMLDLRGTRV 605
>gi|149173873|ref|ZP_01852502.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
gi|148847403|gb|EDL61737.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
Length = 473
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 23/195 (11%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
T+++ALE + G + E + +G NL++L + T FS AG+ L+G L L
Sbjct: 203 TELRALE-------LWGPITDECLKPLGKLKNLKHLIVVGT-FSDAGLKHLSG-LKQLTR 253
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L L Q+ ++ + P L+ S + G T L L L L
Sbjct: 254 LVLHSDQMTGSGLNSFAEAPELREFGFSGSP-------AGNAT-----LKQLDQLPGLAV 301
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
LNL V+DA L + +L LSL+N+++TD L L + L L + +TN+G
Sbjct: 302 LNLSTPSVNDAVLQTMPDLPQLEALSLKNSNITDKGLDALVKVKNLRELVLYSTEITNAG 361
Query: 267 LGSFKPPRSLKLLDL 281
L +P + L+LL L
Sbjct: 362 LIRLEPLQQLRLLVL 376
>gi|290984835|ref|XP_002675132.1| predicted protein [Naegleria gruberi]
gi|284088726|gb|EFC42388.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 47 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMI 104
L +S++ NE A L + + L LDV S + ++QM L +LD+ + +
Sbjct: 4 LTSLSISRNQIGNEGAALLS-QLTKLKKLDVGTSHIGNQGAKSISQMSQLTYLDICKNPL 62
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
G + VE ++ NL LN+S ++AG +++ L NL L++ +I + I +
Sbjct: 63 GIEGVESISTNLKNLTFLNMSYNNINTAGAKLIS-QLENLTELNVGCNEIHNDGIDSICK 121
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
+ L +DI + T S+ L L +L LN+ V+ +
Sbjct: 122 LKLLTSLDIQ------------SNTFHASSVKCLGELQNLRLLNIGYNHVTPDLAKCIGE 169
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
KEL +L++R + D + ++S L KLT L + L++ G
Sbjct: 170 LKELTYLNIRFNYVGDEGMKEISKLKKLTFLDVAQNGLSSEG 211
>gi|423606867|ref|ZP_17582760.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
gi|401241057|gb|EJR47449.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
Length = 766
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|217958905|ref|YP_002337453.1| putative internalin [Bacillus cereus AH187]
gi|423354088|ref|ZP_17331714.1| hypothetical protein IAU_02163 [Bacillus cereus IS075]
gi|423569655|ref|ZP_17545901.1| hypothetical protein II7_02877 [Bacillus cereus MSX-A12]
gi|217066693|gb|ACJ80943.1| putative internalin [Bacillus cereus AH187]
gi|401087798|gb|EJP95998.1| hypothetical protein IAU_02163 [Bacillus cereus IS075]
gi|401205874|gb|EJR12672.1| hypothetical protein II7_02877 [Bacillus cereus MSX-A12]
Length = 766
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|410684550|ref|YP_006060557.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum CMR15]
gi|299069039|emb|CBJ40290.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum CMR15]
Length = 955
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNLEILSLSGTQIDDYAISY 161
G+ ++E + + LR+L+LS S+ + LAG LE L+++G +I D +
Sbjct: 27 GNFTLEDLKALPPTLRHLDLSECTGSAKSRQAIAYLAGL--QLESLNVAGAEIGDVGARW 84
Query: 162 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 221
++ PSLK ++ +N I ++ A + +++SL +L Q + DA +
Sbjct: 85 LAANPSLKSLNAANGGIGAAGARMLAASPVLMSL------------DLTQNAIGDAGVQA 132
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV------------------LT 263
L+ + L +L++RN +TDV L+ +KLT+L + + V +T
Sbjct: 133 LAGNQSLRYLAVRNCLVTDVGAQALALNTKLTSLDLGNLVTETGNEAEQAGYDQTANNIT 192
Query: 264 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 297
G RSLK L + G L +D +L +
Sbjct: 193 AQGAWMLAQSRSLKALSVQGNDLCGDDGVLALAR 226
>gi|384179362|ref|YP_005565124.1| internalin [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324325446|gb|ADY20706.1| internalin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 766
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ + L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITNV---VPLSALKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITN--VVPLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|374850803|dbj|BAL53782.1| hypothetical conserved protein, partial [uncultured planctomycete]
Length = 351
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACV-GANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
F +A + + ++IGD + +A + + +L+LS+ R + G +A L L
Sbjct: 57 FFISGEAFDANGFAYNLIGDVEIAKLASIPEVCICSLDLSHARLTPQGWRKIA-ELRALR 115
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-IQQVGAETDL-VLSLT------- 196
L L+ + +DD + Y++ + SL+ +D++ T +KG ++ VG +L VL LT
Sbjct: 116 ELYLADSNVDDEDLQYLANLGSLETLDLAWTPMKGTGLKHVGQIRNLRVLLLTHTKIADE 175
Query: 197 ---ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+ L LE+L+L T V+D + +S L L SLTD + L+ L +L
Sbjct: 176 HIAQIVPLTKLEKLDLGGTLVTDKGMEFVSRLANLKDLRCPE-SLTDDATKLLARLVQLR 234
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L + + +T+ G+ S K L+ LDL
Sbjct: 235 TLCLSSSCVTSQGVESLKTLSELRSLDL 262
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 5 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFI 58
L L+LAWT G+ + I +L L L++ I D + L K+ L GT
Sbjct: 138 LETLDLAWTPMKGTGLKHVGQIRNLRVLLLTHTKIADEHIAQIVPLTKLEKLDLGGTLVT 197
Query: 59 NEREAFLYIETSLL------SFLDVSNSSLSRF-----------CFLTQ-------MKAL 94
++ F+ +L S D + L+R C +Q + L
Sbjct: 198 DKGMEFVSRLANLKDLRCPESLTDDATKLLARLVQLRTLCLSSSCVTSQGVESLKTLSEL 257
Query: 95 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 154
LDLS + I D +++ + + + L +L LS T + A V + G NL+ L L GT+I
Sbjct: 258 RSLDLSRTKIDDRALDQITVL-SKLEHLLLSETNITDA-VAPVIGRFMNLKSLFLDGTKI 315
Query: 155 DDYAISYMSMMPSLKFIDISNTDIKG 180
D + + + +L+ +++S T + G
Sbjct: 316 SDSVLQEVGKVHTLERLNLSKTAVTG 341
>gi|290985429|ref|XP_002675428.1| predicted protein [Naegleria gruberi]
gi|284089024|gb|EFC42684.1| predicted protein [Naegleria gruberi]
Length = 451
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+++MK L L +S + IGD+ ++++ + L +L++S G L+ + L
Sbjct: 127 FISKMKQLTSLSISGNGIGDEEAKLISEM-KQLTSLDISANLIGDEGAKYLS-EMKQLIS 184
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKGF--IQQVGAETDL--------VLS 194
L++ +ID+ A Y+S M L +DIS T D++G I+++ T L +
Sbjct: 185 LNIGKNEIDEGA-KYISEMKQLASLDISYTQVDVEGAKCIREMRQLTSLNICGNRIGIEG 243
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+ + + L LN+ ++ + +S K+L L++ N + D +S + +L +
Sbjct: 244 VKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLIS 303
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L+IR + N G R L+ L++
Sbjct: 304 LNIRANRIVNQGAKFISEMRQLRSLNI 330
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNL 144
++++MK L LD+S + + VE C+ L +LN+ R GV +++ + L
Sbjct: 198 YISEMKQLASLDISYTQV---DVEGAKCIREMRQLTSLNICGNRIGIEGVKLIS-EMRQL 253
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN---- 200
L++ + I +S M L ++ISN I ++ +E ++SL N
Sbjct: 254 TSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLISLNIRANRIVN 313
Query: 201 --------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ L LN+ ++ + +S K+LI L++R+ +++ +S + +L
Sbjct: 314 QGAKFISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTKLISEMRQL 373
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
T L+I + + + + LK LD+ + E A L
Sbjct: 374 TLLNISNNEIGDEETKLISEMKQLKSLDISYNQIGIEGAKL 414
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 59/253 (23%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVA--------CVGAN--------------LRNLNL 124
+++MK L LD+S+++IGD+ + ++ +G N L +L++
Sbjct: 151 LISEMKQLTSLDISANLIGDEGAKYLSEMKQLISLNIGKNEIDEGAKYISEMKQLASLDI 210
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
S T+ G + + L L++ G +I + +S M L ++I +DI
Sbjct: 211 SYTQVDVEGAKCIR-EMRQLTSLNICGNRIGIEGVKLISEMRQLTSLNIGESDI------ 263
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-- 242
G E ++S + L LN+ + D +S K+LI L++R + +
Sbjct: 264 -GIEGTKLIS-----EMKQLTSLNISNNLIGDEGAKLISEMKQLISLNIRANRIVNQGAK 317
Query: 243 ----LHQLSSLS------------------KLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
+ QL SL+ +L +L+IR ++N G R L LL+
Sbjct: 318 FISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTKLISEMRQLTLLN 377
Query: 281 LHGGWLLTEDAIL 293
+ + E+ L
Sbjct: 378 ISNNEIGDEETKL 390
>gi|326478439|gb|EGE02449.1| F-box domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 775
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 119 LRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISN 175
L++LNLSN R + GV ILA ++P LE L LS T DD S ++ P L+FI+
Sbjct: 423 LKHLNLSNCRLLTENGVKILAHNVPELEGLHLSFLSTLTDDCIASIINTTPKLRFIE--- 479
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQ-VSDATLFP-LSTFKELIHLS 232
++++G T+ V++ A + LE LN+ + + D + P L L L
Sbjct: 480 ------LEELGELTNFVITELARAPCSQTLEHLNISFCENIGDTGILPLLRKCPSLRSLD 533
Query: 233 LRNASLTDVSLHQLSS 248
L N ++D++L ++ S
Sbjct: 534 LDNTRISDLTLMEICS 549
>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
Length = 324
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 54 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEM 111
G I + EA L E L+ L++S++ + +++MK L L++ + IG + +
Sbjct: 33 GKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNICCNRIGVEGAKY 92
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
++ + L +LN+ G +++ L L++ TQI ++S M L +
Sbjct: 93 LSEM-KQLISLNICENEIGDEGAKLIS-ETRQLTSLNIGFTQIGGEGAKFISEMKQLTSL 150
Query: 172 DISNT--DIKG--FIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATL 219
DIS+ ++G FI ++ T L +S + + L LN+ Q+ +
Sbjct: 151 DISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNISNNQIGGEGV 210
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
+S K+L L + N + D +S + +LT+L+I + + G S + LK L
Sbjct: 211 KLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISGNRIGDEGAKSMSEMKQLKSL 270
Query: 280 DL 281
D+
Sbjct: 271 DI 272
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 31/322 (9%)
Query: 62 EAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
EA L E L L++ + + +++MK L L++S ++IGD+ ++++ + L
Sbjct: 17 EAKLISEMKQLISLNIGKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEM-KQL 75
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
+LN+ R G L+ + L L++ +I D +S L ++I T I
Sbjct: 76 TSLNICCNRIGVEGAKYLS-EMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIG 134
Query: 180 G----FIQQVGAETDLVLS--LTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 227
G FI ++ T L +S L ++ + L LN+ + D +S K+
Sbjct: 135 GEGAKFISEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQ 194
Query: 228 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 287
L L++ N + + +S + +LT+L I + + + G + L L++ G +
Sbjct: 195 LTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISGNRIG 254
Query: 288 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSF 347
E A K ++ L + +QIG G S +KQ ++
Sbjct: 255 DEGA-----KSMSEMKQLKSLDI--SYNQIGDEGTKL------ISEMKQLISLNIRANRI 301
Query: 348 LDQRLKYSRE--ELLELQYSSL 367
D+ +KY RE +L L Y L
Sbjct: 302 GDEGVKYIREMKQLTSLTYKGL 323
>gi|406830031|ref|ZP_11089625.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 306
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK-GFIQQVGAETDLVLSLTALQNLNH 203
++SLS + D A ++ P+L + ++++ I + +GA L
Sbjct: 52 HVVSLSSHSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGA-------------LTQ 98
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
LE L L+ TQV+DA L +S+ + L L+L S+TD L L+ L++LT+L++ D +
Sbjct: 99 LESLALDHTQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQIN 158
Query: 264 NSGL 267
GL
Sbjct: 159 GLGL 162
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 48/232 (20%)
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
AF + T L+ + ++ + LTQ LE L L + + D ++ ++ + +LR L
Sbjct: 71 AFPALTTLALTDSPIGDAHMGVIGALTQ---LESLALDHTQVTDAGLQSISSL-EHLREL 126
Query: 123 NLSNTRFSSAGVGILAG-----------------------HLPNLEILSLSGTQIDDYAI 159
NL+ + G+G LAG L LE L L T +D +I
Sbjct: 127 NLAGCSVTDGGLGSLAGLTELTSLNLNDTQINGLGLVYLSKLNRLEALYLQNTVVDFESI 186
Query: 160 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDL-------------------VLSLTALQN 200
+S + SLK + ++ T G I V A T L L+ QN
Sbjct: 187 PPLSGLESLKILHLAGTKTGGGI--VRAITGLPSLERLYLNGTSIKDEDIPALAAVLAQN 244
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
H + L +E+T +SDA L P+ +L +L + T V+ + L KL
Sbjct: 245 CPHFKGLFVEKTALSDAALEPMHPLADLKEFTLIHVHGTKVTKDGVVRLRKL 296
>gi|298709905|emb|CBJ26245.1| Leucine rich repeat protein [Ectocarpus siliculosus]
Length = 262
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L + AL+HL L+++ + E + + +L L+L N + G L NLE L
Sbjct: 65 LGNLGALQHLALNANWLSGHIPEELGAL-RHLEMLSLHNNWLEGP-IPEQLGSLTNLEKL 122
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
L ++ + + + L+ + +S + GFI + L +L+HL+ L
Sbjct: 123 LLFNNRLTGSIPTKLGALAKLEKLALSLNRLTGFIPK------------ELGDLSHLQML 170
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+L Q+ L EL L L N LT+ QL ++KL + I LT S
Sbjct: 171 HLGDNQLDGPIPETLGALGELKELGLNNNKLTETIPKQLGDMTKLERVWISRNELTGSLP 230
Query: 268 GSFKPPRSLKLLDLH 282
PR+LKLL LH
Sbjct: 231 PELAYPRALKLLHLH 245
>gi|421877770|ref|ZP_16309310.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|421879575|ref|ZP_16311039.1| Internalin F [Leuconostoc citreum LBAE C11]
gi|372556467|emb|CCF25430.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|390446546|emb|CCF27159.1| Internalin F [Leuconostoc citreum LBAE C11]
Length = 672
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
D + SLTAL NL +L++L+ +T VSD L P+S+ K L +LS NAS++D+S L SL
Sbjct: 284 DKITSLTALTNLTNLQQLDFSKTSVSD--LSPVSSLKNLTNLSFSNASVSDIS--PLRSL 339
Query: 250 SKLTNLS-IRDAVLTNSGLGSFK 271
+ LT L+ +R+ + S L K
Sbjct: 340 NNLTTLNMLRNHIYDISPLAQLK 362
>gi|408672788|ref|YP_006872536.1| Planctomycete cytochrome C [Emticicia oligotrophica DSM 17448]
gi|387854412|gb|AFK02509.1| Planctomycete cytochrome C [Emticicia oligotrophica DSM 17448]
Length = 482
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
L L LS+ I D++V+ +A NL LNL NTR S + L LP L+ L+L GT
Sbjct: 366 LVRLRLSNQPINDEAVKKIANF-KNLTRLNLENTRISDVSLEYLKA-LPKLQQLNLYGTN 423
Query: 154 IDDYAISYMSMMPSLKFIDISNTDI-KGFIQQV 185
I D ++ ++ P+LK I + T + K I+Q+
Sbjct: 424 ITDKGLAVLTKYPNLKVIYLWQTKVSKSGIEQL 456
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 195 LTALQNL-NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
L L+N+ N L RL L ++D + ++ FK L L+L N ++DVSL L +L KL
Sbjct: 356 LDNLENITNQLVRLRLSNQPINDEAVKKIANFKNLTRLNLENTRISDVSLEYLKALPKLQ 415
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 304
L++ +T+ GL +LK++ L W +++ I Q K P +++
Sbjct: 416 QLNLYGTNITDKGLAVLTKYPNLKVIYL---WQTKVSKSGIEQLKKSLPSLQI 465
>gi|290993851|ref|XP_002679546.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093163|gb|EFC46802.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 385
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 47/272 (17%)
Query: 46 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSM 103
+ +I L GT I+E + L+ L+++N+ + + ++++MK L LD+ ++
Sbjct: 117 EINQIGLEGTKIISE--------LNQLTSLNIANNKMGKQGAKYISEMKQLTKLDIGTNQ 168
Query: 104 IGDDSVE----------------MVACVGA-------NLRNLNLSNTRFSSAGVGILAGH 140
+G + V+ ++ GA L LN+S G ++
Sbjct: 169 LGVEGVQYIRKLDKLTALSVFNNVIGFRGAMLLRKMTQLTELNISTNAIGDVGAKFVS-D 227
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
LPNL IL+LS I ++S +P L ++++ D+ G E + +
Sbjct: 228 LPNLAILNLSFNSISYVGAQFISKLPKLTELNMNQNDL-------GNE-----GVKFISG 275
Query: 201 LNHLERLNLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
+ L L+L+ T++ + F K+L L L ++ D L +L KLT+LS+
Sbjct: 276 IISLTNLSLQTTRIDEHGVKFISEKLKQLRILKLCENNIGDAGAKFLITLEKLTDLSLYS 335
Query: 260 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
+ G + ++L L +HG + E A
Sbjct: 336 NNIGYEGAKAISTMKALTHLRIHGNPIGIEGA 367
>gi|229138115|ref|ZP_04266713.1| Internalin [Bacillus cereus BDRD-ST26]
gi|228645460|gb|EEL01694.1| Internalin [Bacillus cereus BDRD-ST26]
Length = 772
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 392
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 393 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 437
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 304
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 374 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 404
>gi|229016676|ref|ZP_04173611.1| Internalin [Bacillus cereus AH1273]
gi|228744612|gb|EEL94679.1| Internalin [Bacillus cereus AH1273]
Length = 490
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 26/182 (14%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L LD+SN+ ++ L MK ++ L LS + I D V +A + L LNL+N + ++
Sbjct: 18 LESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYLNLANNKITN 74
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 75 --VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK------------ 116
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLS 250
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++ L L +L
Sbjct: 117 --DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDITPLSNLVNLQ 172
Query: 251 KL 252
KL
Sbjct: 173 KL 174
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 12 WTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIET 69
++ VT L + +LE L+LSN I ++ L G +N + + L+G I + A +E
Sbjct: 6 FSDVTPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ 61
Query: 70 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 62 --LDYLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK- 114
Query: 130 SSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------ 181
V L+G + L L + QI+D ++ ++ M L +D+ N ++K
Sbjct: 115 ----VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNL 168
Query: 182 --IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
+Q++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 169 VNLQKLDLEANYITDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 225
>gi|206977546|ref|ZP_03238440.1| putative internalin [Bacillus cereus H3081.97]
gi|206744264|gb|EDZ55677.1| putative internalin [Bacillus cereus H3081.97]
Length = 766
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMPQLKQLHLPNNELKD 431
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|222095062|ref|YP_002529122.1| internalin [Bacillus cereus Q1]
gi|375283399|ref|YP_005103837.1| internalin [Bacillus cereus NC7401]
gi|221239120|gb|ACM11830.1| internalin [Bacillus cereus Q1]
gi|358351925|dbj|BAL17097.1| internalin [Bacillus cereus NC7401]
Length = 761
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 271
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 272 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 328
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 329 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 381
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 382 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 426
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 427 IT--PLSSLVNLQKLDLE 442
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 293
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 294 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 363 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 393
>gi|330833202|ref|YP_004402027.1| hypothetical protein SSUST3_1420 [Streptococcus suis ST3]
gi|386584599|ref|YP_006081002.1| putative lipoprotein [Streptococcus suis D9]
gi|329307425|gb|AEB81841.1| putative lipoprotein [Streptococcus suis ST3]
gi|353736745|gb|AER17754.1| putative lipoprotein [Streptococcus suis D9]
Length = 858
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 538 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 597
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 598 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 655
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 656 LDNNRITDLSA--LQNKKKLTRLYI 678
>gi|16802378|ref|NP_463863.1| hypothetical protein lmo0333 [Listeria monocytogenes EGD-e]
gi|386049260|ref|YP_005967251.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404282763|ref|YP_006683660.1| internalin I [Listeria monocytogenes SLCC2372]
gi|405757319|ref|YP_006686595.1| internalin I [Listeria monocytogenes SLCC2479]
gi|81849931|sp|Q8YA32.1|INLI_LISMO RecName: Full=Internalin-I; Flags: Precursor
gi|16409711|emb|CAC98412.1| lmo0333 [Listeria monocytogenes EGD-e]
gi|346423106|gb|AEO24631.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404232265|emb|CBY53668.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235201|emb|CBY56603.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 1778
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 704 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
>gi|404412424|ref|YP_006698011.1| internalin I [Listeria monocytogenes SLCC7179]
gi|404238123|emb|CBY59524.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 1783
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 704 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
>gi|284800621|ref|YP_003412486.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284993807|ref|YP_003415575.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
gi|284056183|gb|ADB67124.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284059274|gb|ADB70213.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
Length = 1778
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL +L N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 704 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
>gi|225452694|ref|XP_002276873.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Vitis vinifera]
Length = 783
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ L HLDLS + + + + + + L +L+LS+ + + + G L L L LS
Sbjct: 123 LTKLTHLDLSYNQLNGNIPQQMYTL-TELTHLDLSSNQMTGP-IPHQIGTLTELIFLHLS 180
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ-VGAETDLV---LSLT--------AL 198
G ++ S + L +D+S+ + G I +G T+L+ LS T +L
Sbjct: 181 GNELTGAIPSSFGRLTKLTHLDLSSNQLTGPIPHPIGTLTELIFLHLSWTELTGAIPSSL 240
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+L L L+L Q++ + + T EL HL L N L+ HQ+ +L++LT L +
Sbjct: 241 GHLTKLTHLDLSYNQLNGSISHQMYTLTELTHLDLSNNQLSGSIPHQIGTLTELTYLDLS 300
Query: 259 DAVLTN---SGLGSFKPPRSLKL 278
+ LT S LGS SL L
Sbjct: 301 WSELTGAMPSSLGSLTKLTSLNL 323
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 72 LSFLDVSNSSL-----SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 126
L FL +S + L S F LT+ L HLDLSS+ + + + L L+LS
Sbjct: 174 LIFLHLSGNELTGAIPSSFGRLTK---LTHLDLSSNQLTGPIPHPIGTL-TELIFLHLSW 229
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI-QQV 185
T + A L GHL L L LS Q++ M + L +D+SN + G I Q+
Sbjct: 230 TELTGAIPSSL-GHLTKLTHLDLSYNQLNGSISHQMYTLTELTHLDLSNNQLSGSIPHQI 288
Query: 186 GAETDLV-LSLT----------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
G T+L L L+ +L +L L LNL Q++ + + K+L+ L L
Sbjct: 289 GTLTELTYLDLSWSELTGAMPSSLGSLTKLTSLNLCMNQINGSIPPEIGNIKDLVSLDLH 348
Query: 235 NASLTDVSLHQLSSLSKLTNLSI 257
++ +L L +L L +
Sbjct: 349 RNLISGEIPSKLKKLKRLECLDL 371
>gi|194761256|ref|XP_001962845.1| GF15644 [Drosophila ananassae]
gi|190616542|gb|EDV32066.1| GF15644 [Drosophila ananassae]
Length = 1238
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLD-LSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF 129
L L +S + L+ C L ++ + HL+ L G ++ VG + LR LN+S+
Sbjct: 228 LKVLKISGNRLAN-CNLINLQNMNHLEELHLDRNGLKTLPQRFLVGLSELRLLNISHNLL 286
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
S I AG L LE L +SG ++ L+ +D+S+ + F A
Sbjct: 287 SELPRDIFAGAL-KLERLLISGNRLTVLPFQLFQTAGDLQVLDLSDNRLLSFPDNFFARN 345
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
HL +L+L++ Q+ L +EL HL L SL + SL
Sbjct: 346 ------------GHLRQLHLQRNQLKSLGKQSLYNLRELRHLDLSQNSLASIDRKAFESL 393
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+L L+I LT F+P SLK LDL
Sbjct: 394 GRLLALNISGNNLTMLSSTIFQPLHSLKQLDL 425
>gi|56698247|ref|YP_168620.1| hypothetical protein SPO3424 [Ruegeria pomeroyi DSS-3]
gi|56679984|gb|AAV96650.1| leucine rich repeat protein [Ruegeria pomeroyi DSS-3]
Length = 556
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 19/150 (12%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
LR+L+L+NT+ S + LA L L LSL+ TQ+ D I+ ++ + L + ++NT +
Sbjct: 49 LRDLDLNNTQVSD--IAPLAA-LTRLNALSLNDTQVSD--IAPLAALTRLTMLSLNNTQV 103
Query: 179 KGFIQQVGAETDL---------VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
I + A T L V + L L L L+L +TQVSD + L+ L
Sbjct: 104 SD-IAPLAALTRLTGLWLHNTQVSDIAPLAALTRLTGLSLNKTQVSD--IAALAALTRLT 160
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
LSL N ++D++ L+SL++LT LS+ +
Sbjct: 161 TLSLNNTQVSDIA--PLASLTRLTTLSLEN 188
>gi|46446626|ref|YP_007991.1| hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400267|emb|CAF23716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 583
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 143 NLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
NL++L L I D +++++ + +L+ +D+S+ + + VG L L L
Sbjct: 252 NLKVLHLEACLAITDDGLAHLAPLVALQHLDLSDCE---NLTDVG--------LAHLTPL 300
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA 260
L+ L+L +DA L L+ L HL+L S TD L L+ L+ L +L +R
Sbjct: 301 TALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLTALQHLDLRGC 360
Query: 261 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
LT++GL P L+ LDL G LT+ +
Sbjct: 361 YLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGL 392
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 30/292 (10%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + +L+ L+LS+C D L L + L G F + A L T+L
Sbjct: 268 GLAHLAPLVALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTAL 327
Query: 72 ----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
LSF SN++ + LT + AL+HLDL + D + + + L++L+L
Sbjct: 328 QHLNLSF--CSNATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHLTPL-TGLQHLDLIGC 384
Query: 128 R-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS---NTDIKGFI 182
+ + AG+ L L L+ L+L+ + + D +++++ + +L+ +D+S N G
Sbjct: 385 KDLTDAGLAHLRP-LTALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFCSNITDDGLA 443
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDV 241
T L+L+ L +DA L L+ L HL+L +LTD
Sbjct: 444 HLTLLTTLQHLNLSGCYKL-------------TDAGLAHLTLLTGLQHLNLNWYKNLTDA 490
Query: 242 SLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
L L+ L+ L L++ D LT++GL P +L+ L+L G + LT+ +
Sbjct: 491 GLAHLTPLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGL 542
>gi|85679226|gb|ABC72029.1| InlA [Listeria monocytogenes]
Length = 791
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+S+L L L N I I + +N L ++ L+ T + LSF
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI-DSLKNLTNLNRLELSSNTISDISALSGLTNLQQLSF 192
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
+ ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 193 ----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 245
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQV 185
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I + ++
Sbjct: 246 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 299
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
T+ + +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 300 KLGTNQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 355
Query: 246 LSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 VSSLTKLQRL 365
>gi|386586655|ref|YP_006083057.1| putative lipoprotein [Streptococcus suis D12]
gi|353738801|gb|AER19809.1| putative lipoprotein [Streptococcus suis D12]
Length = 858
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 538 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 597
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 598 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 655
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 656 LDNNRITDLSA--LQNKKKLTRLYI 678
>gi|403062018|ref|YP_006650234.1| lipoprotein [Streptococcus suis S735]
gi|402809344|gb|AFR00836.1| putative lipoprotein [Streptococcus suis S735]
Length = 858
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 538 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 597
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 598 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 655
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 656 LDNNRITDLSA--LQNKKKLTRLYI 678
>gi|253752270|ref|YP_003025411.1| lipoprotein [Streptococcus suis SC84]
gi|253754096|ref|YP_003027237.1| Streptococcal histidine triad-family protein [Streptococcus suis
P1/7]
gi|253756030|ref|YP_003029170.1| Streptococcal histidine triad-family protein [Streptococcus suis
BM407]
gi|386578400|ref|YP_006074806.1| Internalin protein [Streptococcus suis GZ1]
gi|386580470|ref|YP_006076875.1| putative lipoprotein [Streptococcus suis JS14]
gi|386582545|ref|YP_006078949.1| putative lipoprotein [Streptococcus suis SS12]
gi|386588670|ref|YP_006085071.1| putative lipoprotein [Streptococcus suis A7]
gi|251816559|emb|CAZ52196.1| putative lipoprotein [Streptococcus suis SC84]
gi|251818494|emb|CAZ56324.1| Streptococcal histidine triad-family protein [Streptococcus suis
BM407]
gi|251820342|emb|CAR46897.1| Streptococcal histidine triad-family protein [Streptococcus suis
P1/7]
gi|292558863|gb|ADE31864.1| Internalin protein [Streptococcus suis GZ1]
gi|319758662|gb|ADV70604.1| putative lipoprotein [Streptococcus suis JS14]
gi|353734691|gb|AER15701.1| putative lipoprotein [Streptococcus suis SS12]
gi|354985831|gb|AER44729.1| putative lipoprotein [Streptococcus suis A7]
Length = 858
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 538 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 597
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 598 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 655
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 656 LDNNRITDLSA--LQNKKKLTRLYI 678
>gi|343421695|emb|CCD18730.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 582
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 139/310 (44%), Gaps = 46/310 (14%)
Query: 5 LSFLNLAWTGVT--KLPNIS---SLECLNLSNCTIDSILEGNENKAPLAKI-SLAGTTF- 57
L LNL T VT LP +S SLE LNLS+C G N +PL +I SL
Sbjct: 271 LRILNLRNTAVTDHSLPGLSESDSLEILNLSSC------RGLTNVSPLKEIKSLVQLDLS 324
Query: 58 --------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 109
I A ++ T L ++N SL C + ++LE LD SS D
Sbjct: 325 NCPALRDGIGSLVALPFLCTLKLRNTAITNESLRDIC---ESESLEELDASSCTALSDVF 381
Query: 110 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 169
+ V L LNLS G+ +A LP L L +SGT I ++ + + SL+
Sbjct: 382 HIS--VLNTLVELNLSFCPNLVKGMEAIAS-LPFLRALDISGTPITNHCLRGLRKSNSLE 438
Query: 170 FIDISN----TDIKGFIQQV--------GAETDLVLSLTALQNLNHLERLNLEQTQVSDA 217
+ + + TD+ ++ ++ G L + L L L LNLE T+ ++
Sbjct: 439 TVSLRSCNNLTDV-FYLSKISTLLRLDLGCCISLQKGVGTLGKLPRLRILNLEGTRAAND 497
Query: 218 TLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPP-- 273
+ LST + L L L + +L+DVSL L+++ L L I + V SG + K P
Sbjct: 498 WIIGLSTSRSLAVLILSSCLALSDVSL--LANIEPLEELDISNCVSIRSGAEALLKLPQI 555
Query: 274 RSLKLLDLHG 283
R LK+ D++
Sbjct: 556 RVLKMYDVNA 565
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 48/254 (18%)
Query: 109 VEMVACVG-------ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 161
+E++ C G ANL +L + + R S V G L NL L LSGT++ D
Sbjct: 87 IEIIMCKGIFDLSILANLGSLEVLSVRGSRVHVTGSIGGLKNLRELDLSGTRVQDEVFYE 146
Query: 162 MSMMPSLKFIDISN----------TDIKGFIQ-QVGAETDLVLSLTALQNLNHLERLNLE 210
+S P+L +++ DI+ + +G + + L L +L LNLE
Sbjct: 147 LSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLGLCRSINEGVQDLAELPNLRVLNLE 206
Query: 211 QTQVSDATLF-----------------------PLSTFKELIHLSLRNASLTDVSLHQLS 247
+ V +LF PLS K L+ L L + +L
Sbjct: 207 KVNVPSDSLFELCKSRSLEKLNLSSCKRLLDVSPLSEIKTLVELDLSLCCSLFTGVSELG 266
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE 307
L L L++R+ +T+ L SL++L+L LT + L+ K ++++ +
Sbjct: 267 KLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLSSCRGLTNVSPLKEIKSLVQLDLSN- 325
Query: 308 LSVICPS--DQIGS 319
CP+ D IGS
Sbjct: 326 ----CPALRDGIGS 335
>gi|290996272|ref|XP_002680706.1| hypothetical protein NAEGRDRAFT_63852 [Naegleria gruberi]
gi|284094328|gb|EFC47962.1| hypothetical protein NAEGRDRAFT_63852 [Naegleria gruberi]
Length = 418
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECL---NLSNCTIDSILEGNENKAPLAK----ISLA 53
+FP L+ L + +T L NI+ LE L ++ C D +L+ + L K +SL+
Sbjct: 170 LFPNLTSLKIPQGHITNLKNIAKLEKLTELDIGECC-DIVLDDGLSPLALMKNLTSLSLS 228
Query: 54 GTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQ-MKALEHLDLSSS-MIGDDSV 109
F E + L+S LDVS+S ++ LT +K L ++S++ +IGD++
Sbjct: 229 KIVFAPEEYKPITQLPRLVS-LDVSSSDNTVESIKILTSSLKQLTIFNISNNFLIGDEAA 287
Query: 110 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM---SMMP 166
++ L LN+SNT GV + L L L + QI D + ++
Sbjct: 288 RLIGESLKQLTFLNISNTNLQPQGVKYIC-ELTELRHLEMGENQIFDQEVVFICKSKFSS 346
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL-FPLSTF 225
L +D+ NT ++ E L +L L++L+ LNL T++ + + FP F
Sbjct: 347 KLTNLDLKNT-------RISKE-----CLKSLSTLDNLQYLNLMFTEIDKSNITFP---F 391
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSK 251
K+L L+L+ +L L +L++ ++
Sbjct: 392 KKLRFLTLKENNLDGDELEELTNFNQ 417
>gi|255521411|ref|ZP_05388648.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-175]
Length = 1775
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFLNLA----WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L L+ T + + ++ L+ L L C I SI G + P L K+ L
Sbjct: 385 LPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQ 442
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS + L+ L ++ LE L++SS+ + D S
Sbjct: 443 LTSISEIN---DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNF 496
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ + D IS + MP+L+ +D SN
Sbjct: 497 PSLNYINVSNNVIRTVGK---MTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNN 551
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + + + + +L LE + +++ + T L
Sbjct: 552 LITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNL 606
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+ + S + SL + L KL L + D LG+ L+ L+L +L
Sbjct: 607 PELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
N + + L + L+ ++ SNCT L + L I L+G + + E +
Sbjct: 305 NASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSL---- 360
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNL 124
L + ++++ S C + + L +L ++I D+ ++ L+ L L
Sbjct: 361 KDLPNLVNITADS----CAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLAL 416
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 180
+S G +LP LE L L Q+ +IS ++ +P L ++D+S +
Sbjct: 417 DGCGITSIGT---LDNLPKLEKLDLKENQLT--SISEINDLPRLSYLDVSVNYLTTIGEL 471
Query: 181 ----FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ + ++ + ++ L N L +N+ + T+ ++ L +N
Sbjct: 472 KKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIR--TVGKMTELPSLKEFYAQNN 529
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+++D+S+ + + L + + ++TN +G+F L+ LD+H
Sbjct: 530 NVSDISM--IHDMPNLRKVDASNNLITN--IGTFDNLPKLQNLDVH 571
>gi|195430008|ref|XP_002063049.1| GK21713 [Drosophila willistoni]
gi|194159134|gb|EDW74035.1| GK21713 [Drosophila willistoni]
Length = 833
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 203 HKSAFLGIKGPLQALGLPGNALLSVPWNALSSLSALERLDLANNKI--KALGTADFVGLG 260
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS + +L L +L L G ++ DYA S S+ +L+ +D++
Sbjct: 261 NLIYLELSNNQISSISQRTFS-NLRQLSVLKLGGNRLGDYAQSLKSLSQCLNLRELDLTA 319
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ G LS L L LE LNL + + L+ F L+ LSLR+
Sbjct: 320 NNLNG-----------PLSEQTLPGLRILETLNLNRNMIKSIQNKALANFSRLVSLSLRH 368
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 369 NQIDVLQDHAFYGLGSLDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 427
>gi|146319231|ref|YP_001198943.1| internalin A precursor [Streptococcus suis 05ZYH33]
gi|145690037|gb|ABP90543.1| putative internalin A precursor [Streptococcus suis 05ZYH33]
Length = 813
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 493 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 552
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 553 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 610
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 611 LDNNRITDLSA--LQNKKKLTRLYI 633
>gi|401426392|ref|XP_003877680.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493926|emb|CBZ29217.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 811
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 133/292 (45%), Gaps = 43/292 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGT-----TFINEREAFLY 66
T V L L + LSN +DS ++G + L ++ L+ T + + ++ +Y
Sbjct: 343 TNVQALATGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNCLGQSQSLIY 402
Query: 67 IETS----------------LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 110
+ + L L ++N+++ FL + +L+ L L S+++ ++E
Sbjct: 403 LNLAKTHVTSEGIADLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAALE 462
Query: 111 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 170
+ L++L+L++TR ++ H NL L L G+ +D I+ + +P L+
Sbjct: 463 GFGRL-QTLQDLSLAHTRVTNV---TELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRV 518
Query: 171 IDISNTDIKGFIQQVGAETDLVLSLTALQNLN-HLERLNLEQTQVSDATLFPLSTFKELI 229
+ +S TD+ A +L+L +L+ L R+N + F ++ L
Sbjct: 519 LLLSKTDV--------ASLELILQSASLEQLEVKFSRVN------EKSAFFGVTKASALT 564
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+++L + ++D+ + L +L L++ + +T+ G+ +SL+ +DL
Sbjct: 565 YVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCDAKSLQEVDL 614
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA---CVGANLRNLNLSNTRFSSA 132
D + ++R CFL + LS + D V +A CV L LS TR ++
Sbjct: 296 DFDWAGVARCCFL------RSVHLSGCNVKDADVPHLAQLPCV----EELLLSRTRITN- 344
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
V LA L I+ LS Q+D I + +P L +D+S+T LV
Sbjct: 345 -VQALATG-KGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSST--------------LV 388
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ L L LNL +T V+ + LS L HL L N ++ DVS L+ L
Sbjct: 389 SDVNCLGQSQSLIYLNLAKTHVTSEGIADLSRLLTLEHLMLNNNNIRDVSF--LAESHSL 446
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
LS++ ++ ++ L F ++L+ L L
Sbjct: 447 KTLSLQSTLVDSAALEGFGRLQTLQDLSL 475
>gi|302024248|ref|ZP_07249459.1| Streptococcal histidine triad-family protein [Streptococcus suis
05HAS68]
Length = 836
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 538 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 597
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 598 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 655
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 656 LDNNRITDLSA--LQNKKKLTRLYI 678
>gi|206967913|ref|ZP_03228869.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
AH1134]
gi|206736833|gb|EDZ53980.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
AH1134]
Length = 1086
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + L+ L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LKTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|389857079|ref|YP_006359322.1| putative lipoprotein [Streptococcus suis ST1]
gi|353740797|gb|AER21804.1| putative lipoprotein [Streptococcus suis ST1]
Length = 465
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 145 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 204
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 205 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 262
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 263 LDNNRITDLSA--LQNKKKLTRLYI 285
>gi|302508487|ref|XP_003016204.1| F-box domain protein [Arthroderma benhamiae CBS 112371]
gi|291179773|gb|EFE35559.1| F-box domain protein [Arthroderma benhamiae CBS 112371]
Length = 774
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 118 NLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDIS 174
L++LN+SN R + GV ILA ++P LE L LS T DD S ++ P L+FI+
Sbjct: 421 KLKHLNISNCRLLTENGVKILAHNVPELEGLHLSFLSTLTDDCIASIINTTPKLRFIE-- 478
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNH-LERLNLEQTQ-VSDATLFP-LSTFKELIHL 231
++++G T+ V++ A + LE LN+ + + D + P L L L
Sbjct: 479 -------LEELGELTNFVITELARAACSQTLEHLNISFCENIGDTGILPLLRKCPSLRSL 531
Query: 232 SLRNASLTDVSLHQLSS 248
L N ++D++L ++ S
Sbjct: 532 DLDNTRISDLTLMEICS 548
>gi|365163588|ref|ZP_09359694.1| hypothetical protein HMPREF1014_05157, partial [Bacillus sp.
7_6_55CFAA_CT2]
gi|363615357|gb|EHL66823.1| hypothetical protein HMPREF1014_05157, partial [Bacillus sp.
7_6_55CFAA_CT2]
Length = 869
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + L+ L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LKTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|46446906|ref|YP_008271.1| hypothetical protein pc1272 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400547|emb|CAF23996.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 618
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLE 145
+LT + L+HL+L+ + + + + A L++LNLS+ R + AG+ L
Sbjct: 271 YLTPLTTLQHLNLAGCKFANAGLAHLTPLVA-LQHLNLSHCRNLTDAGLPHLTLLTALTY 329
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIK-GFIQQVGAETDLVLS------ 194
+ I D +++++ + +L ++++S+ TD + + A T L LS
Sbjct: 330 LNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLT 389
Query: 195 ---LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSL 249
L L L L LNL +DA L L+ L HL L + ++TD L L+ L
Sbjct: 390 DAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPL 449
Query: 250 SKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
LT+L++ T++GL P +L+ LDL+G W LT+ +
Sbjct: 450 VALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGL 493
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 39/269 (14%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYI 67
NL G+ L +++L LNLS+C N A LA ++ L T +N + +
Sbjct: 362 NLTDAGLAHLTPLTALTYLNLSSC-------NNLTDAGLAHLTPLVTLTHLNLSWCYNFT 414
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS- 125
+ L LT + AL+HLDL I D + + + A L +LNLS
Sbjct: 415 DAGL--------------AHLTPLVALQHLDLGHCRNITDAGLAHLTPLVA-LTHLNLSW 459
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
F+ AG+ LA L L+ L L+G Q+ D +++++ + +L +D+S+ +
Sbjct: 460 CYNFTDAGLAHLAP-LVALQHLDLNGCWQLTDAGLAHLAPLVALTHLDLSSCN-----HL 513
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSL 243
A + L ALQ+L+ NL +DA L L+ L HL+L + + TD L
Sbjct: 514 TDAGLPHLTPLVALQHLDLSYCRNL-----TDAGLAHLAPLVALTHLNLSSCNHFTDAGL 568
Query: 244 HQLSSLSKLTNLSIRDAV-LTNSGLGSFK 271
L+ L L +L++ T++GL FK
Sbjct: 569 THLTPLLALQDLNLNYCENFTDAGLAHFK 597
>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum PSI07]
Length = 608
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 43/256 (16%)
Query: 5 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFI 58
L LNL++ GV L ++L L+L C IDS A LA + L G+ I
Sbjct: 380 LKSLNLSYNLISLRGVRALGGSATLSVLDLCACDIDSSGASALARNASLASLYL-GSNRI 438
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+R A + S L+ L +S + + H + ++ G+DS
Sbjct: 439 GDRGARALAKNSTLTRLALSGNGI-------------HTTGAQALAGNDS---------- 475
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L +L+L G LA H P L L L G +I ++ +L +D+S
Sbjct: 476 LISLDLGGNEIDDDGAAALARH-PRLISLDLRGNRIRSAGAQQLAKSATLAELDLS---- 530
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
++GAE LS + + L LN+ + DA L+ LI L R + +
Sbjct: 531 ---ANRIGAEGAEALSRSTV-----LTTLNVSDNAIGDAGALALAKSTSLISLDARRSGI 582
Query: 239 TDVSLHQLSSLSKLTN 254
+V L + ++LT
Sbjct: 583 GEVGARALEANTRLTG 598
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 33/267 (12%)
Query: 45 APLAKISLAGTTFINEREAFLYIETSLLSFL-------DVSNSSLSRFCFLTQMKALEHL 97
APL ++L +E L +L S D +L+ LTQ L
Sbjct: 258 APLVSLNLYSNAIGDEGARALATSRTLTSLNLSSNGIDDAGAGALADNTLLTQ------L 311
Query: 98 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 157
+L + IG + +A +L +L+L N R G LAG +L LS+ G +I D
Sbjct: 312 NLQGNRIGRGGAQALANS-TSLTDLDLGNNRLGDRGARALAGS-KSLTSLSVRGNEIGDK 369
Query: 158 AISYMSMMPSLKFIDISNT--DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 215
++ +LK +++S ++G G+ T VL L A +++ + S
Sbjct: 370 GAKALARNATLKSLNLSYNLISLRGVRALGGSATLSVLDLCA---------CDIDSSGAS 420
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
L+ L L L + + D L+ S LT L++ + +G + S
Sbjct: 421 -----ALARNASLASLYLGSNRIGDRGARALAKNSTLTRLALSGNGIHTTGAQALAGNDS 475
Query: 276 LKLLDLHGGWLLTEDAILQFCKMHPRI 302
L LDL GG + +D + HPR+
Sbjct: 476 LISLDL-GGNEIDDDGAAALAR-HPRL 500
>gi|290975580|ref|XP_002670520.1| predicted protein [Naegleria gruberi]
gi|284084080|gb|EFC37776.1| predicted protein [Naegleria gruberi]
Length = 265
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 16/221 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
MK L LD+SS+ IGD ++ + NL L + G ++ L L IL +S
Sbjct: 1 MKQLTALDISSNRIGDGGAMLIGGL-KNLITLQIYENHLGPNGAKSIS-ELKQLTILDIS 58
Query: 151 GTQIDDYAISYMS-MMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTALQ-------- 199
+I D + +S M L +DIS I KG + V + +L+ Q
Sbjct: 59 HNRIRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLVEMKNLKILAFYDCQLSTKQAET 118
Query: 200 --NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ + L++ ++ L + K+LI L L +T + +S L +LT L+I
Sbjct: 119 ISKMKQITELDISYNLTNNEILKSIGEMKQLIKLYLVKNGITSHQVEIISQLKQLTVLNI 178
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
+ + N G+ + L LD+ + E +L CKM
Sbjct: 179 SENEIRNEGVVYISGLKQLTELDISNNGIGYE-GVLSICKM 218
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++++K L LD+S + I D+ V+ ++ L NL++S S G+ L + NL+IL
Sbjct: 46 ISELKQLTILDISHNRIRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLV-EMKNLKIL 104
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIKGFIQQVGAETDLVL--------SL 195
+ Q+ +S M + +DIS N +I I ++ L L +
Sbjct: 105 AFYDCQLSTKQAETISKMKQITELDISYNLTNNEILKSIGEMKQLIKLYLVKNGITSHQV 164
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ L L LN+ + ++ + + +S K+L L + N + + + +++LT L
Sbjct: 165 EIISQLKQLTVLNISENEIRNEGVVYISGLKQLTELDISNNGIGYEGVLSICKMTQLTKL 224
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLD 280
SI + + P +L++LD
Sbjct: 225 SIYNNPI---------PEEALRILD 240
>gi|46447096|ref|YP_008461.1| hypothetical protein pc1462 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400737|emb|CAF24186.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 870
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 41/280 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
TG+ L ++++L+ L+LS C + + G ++ A Y++ S
Sbjct: 375 TGLAHLTSLTALQNLDLSECYL---------------LKDTGLAHLSSLTALQYLDLSGC 419
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSS--SMIGDDSVEMVACVGANLRNLNLSNTR-F 129
D++++ L+ LT + +L+HLDLS ++ GD + V LR+L LS+ R
Sbjct: 420 D--DLTDAGLAH---LTPLVSLQHLDLSKCENLTGDGLAHLTPLVA--LRHLGLSDCRNL 472
Query: 130 SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
+ AG+ L L L+ L LS + + D + ++S + +L+++ ++
Sbjct: 473 TDAGLAHLTP-LTALKHLDLSECKNLTDDGLVHLSSLVALQYLS---------LKLCENL 522
Query: 189 TDLVLS-LTALQNLNHLE-RLNLEQTQ-VSDATLFPLSTFKELIHLSLR-NASLTDVSLH 244
TD L+ LT+L L HL+ L+ Q ++D L LS+ L HL L +LTD L
Sbjct: 523 TDAGLAHLTSLTALEHLDLGLDFGYCQNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLA 582
Query: 245 QLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 283
L+SL+ L +L + LT+ GL P +L+ L L G
Sbjct: 583 HLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQYLSLKG 622
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 28/291 (9%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL----AGTTFINEREAFLYIE 68
TG+ L ++++L+ L+LS C D G + PL + + A L
Sbjct: 400 TGLAHLSSLTALQYLDLSGCD-DLTDAGLAHLTPLVSLQHLDLSKCENLTGDGLAHLTPL 458
Query: 69 TSL--LSFLDVSNSSLSRFCFLTQMKALEHLDLS--SSMIGDDSVEMVACVGANLRNLNL 124
+L L D N + + LT + AL+HLDLS ++ D V + + V +L L
Sbjct: 459 VALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKNLTDDGLVHLSSLVALQYLSLKL 518
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLS-----GTQIDDYAISYMSMMPSLKFIDISNTDIK 179
+ AG+ L L LE L L + D ++++S + +LK +D+S +
Sbjct: 519 CE-NLTDAGLAHLTS-LTALEHLDLGLDFGYCQNLTDDGLAHLSSLTALKHLDLS---WR 573
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
+ G + LT+L L HL+ E ++D L L+ L +LSL+ + +T
Sbjct: 574 ENLTDAG-----LAHLTSLTALKHLDLSWCEN--LTDEGLAYLTPLVALQYLSLKGSDIT 626
Query: 240 DVSLHQLSSLSKLTNLSIRDA--VLTNSGLGSFKPPRSLKLLDLHGGWLLT 288
D L L+ LS L +LS+ D + GL +L+ LDL G + L+
Sbjct: 627 DEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLDLSGCYSLS 677
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 47/241 (19%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG----------- 135
+LT + AL++L L S I D+ +E +A + A LR+L+L++ R G G
Sbjct: 608 YLTPLVALQYLSLKGSDITDEGLEHLAHLSA-LRHLSLNDCRRIYHGYGLAHLTTLVNLE 666
Query: 136 ---------------ILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS---NT 176
I L NL+ L+LSG + + ++ + +L+++D+S N
Sbjct: 667 HLDLSGCYSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDLSSCINL 726
Query: 177 DIKGF----------IQQV---GAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPL 222
KG +Q + G + L L +L LE L+L + ++D L L
Sbjct: 727 TDKGLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKGLAYL 786
Query: 223 STFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLD 280
++F L +L+L+ +TD L L+SL L L++ + V LT++GL +L+ L+
Sbjct: 787 TSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVNLQDLE 846
Query: 281 L 281
L
Sbjct: 847 L 847
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDIS 174
++ LNLS F + + + NL++L L T ID +++++ + +L+ +D+S
Sbjct: 334 TDIEELNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDT-GLAHLTSLTALQNLDLS 392
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSL 233
+ ++ G L L +L L+ L+L ++DA L L+ L HL L
Sbjct: 393 ECYL---LKDTG--------LAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDL 441
Query: 234 -RNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
+ +LT L L+ L L +L + D LT++GL P +LK LDL LT+D
Sbjct: 442 SKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKNLTDDG 501
Query: 292 ILQF 295
++
Sbjct: 502 LVHL 505
>gi|260830796|ref|XP_002610346.1| hypothetical protein BRAFLDRAFT_136091 [Branchiostoma floridae]
gi|229295711|gb|EEN66356.1| hypothetical protein BRAFLDRAFT_136091 [Branchiostoma floridae]
Length = 305
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 74 FLDVSNSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
+LD++ +S S +F L+Q L+ + L + + D + + NL +L L+ R
Sbjct: 2 YLDLTGNSFSTVEGSQFSGLSQ---LQEIRLDRNGVTDLDRDAFRSL-ENLYSLRLAGNR 57
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN-----TDIKGFIQ 183
++ L +LP L+ L L I + S +PSL +D+S+ D F
Sbjct: 58 LTTVPQQALQ-YLPVLKHLHLQQNSIRSVSEDDFSGLPSLTQLDLSDNLIAEVDTSAFTP 116
Query: 184 QVGAETDLVLSLTALQNLNH--------LERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
E L LSL L L H L RL L+ T ++D T L F L L L +
Sbjct: 117 LSNLEV-LNLSLNPLSQLRHGPDQGLPWLRRLYLQHTAITDVTAEMLKGFSNLTDLELGS 175
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
+ V+ S L L +R+ +TN G+F P L+ L L L+ D+
Sbjct: 176 CRIQSVAADAFSPTRGLAYLGLRNNSITNIAAGTFAPLSKLETLYLDDNGLVGLDS 231
>gi|42780518|ref|NP_977765.1| internalin [Bacillus cereus ATCC 10987]
gi|42736438|gb|AAS40373.1| internalin, putative [Bacillus cereus ATCC 10987]
Length = 755
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 7 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 271
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 272 SDVTPIVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 328
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 329 YLNLANNKITN--VTPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 381
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 382 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 426
Query: 241 VSLHQLSSLSKLTNLSIR 258
++ LSSL L L +
Sbjct: 427 IT--PLSSLVNLQKLDLE 442
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 58/211 (27%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 129
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPIVKM-----DNLDSLDLSNNKI 293
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
++ I + N++ L LSG QI+D
Sbjct: 294 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + L+ LNL ++++ T PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVT--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 250 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
L +L ++D VLT + + +K L+
Sbjct: 363 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 393
>gi|423409412|ref|ZP_17386561.1| hypothetical protein ICY_04097, partial [Bacillus cereus BAG2X1-3]
gi|401655354|gb|EJS72886.1| hypothetical protein ICY_04097, partial [Bacillus cereus BAG2X1-3]
Length = 776
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 38/257 (14%)
Query: 29 LSNCTIDSILEGNENKAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLSRF 85
++N +D L+ + NK L + + INE +E L I+T + S ++
Sbjct: 187 VANVIVDKKLQQHINKYNLDRKN------INEPITKEDLLKIKTLTI----YSGEGINEI 236
Query: 86 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPN 143
L MK LE L L + + D ++ + L+ L+LS+ S +L N
Sbjct: 237 AGLEYMKNLEKLTLRETNVTD-----ISAISELRYLKFLDLSSNLIESIQP---VSNLEN 288
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDLVLSLTALQNL 201
L++L L +I D ++ +S M +K +D+ +IK + V + +L L+ + NL
Sbjct: 289 LDMLFLRDNKIAD--LTPLSQMKKIKTLDLIGNNIKDLTPLFTVASVKELYLANNQISNL 346
Query: 202 NHLERLN------LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ +E+LN + Q+SD P+S +LI L + ++ L D+S LS L KL L
Sbjct: 347 SGIEKLNNVKLLWIGNNQISDVE--PISKMSKLIELEIADSDLKDIS--PLSKLGKLQVL 402
Query: 256 SIRDAVLTN-SGLGSFK 271
++ + +++ S LG K
Sbjct: 403 NLEENFISDISALGELK 419
>gi|290980851|ref|XP_002673145.1| predicted protein [Naegleria gruberi]
gi|284086726|gb|EFC40401.1| predicted protein [Naegleria gruberi]
Length = 468
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++MK L +L ++++ IG + + + + NL LN+S G ++ L L L
Sbjct: 132 VSEMKQLTNLYVNANNIGTEGAKFLREL-KNLTYLNISENDIGVEGAKYIS-ELKQLTDL 189
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+S I Y+S + L +DI + +I G E +S LN L+ L
Sbjct: 190 DISYNNIGTEGAKYISDLKQLTTLDIESNNI-------GTEGAKYIS-----ELNQLQVL 237
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
N+ + + D +S K+L HL + ++ + +S + +LTNL I + + + G
Sbjct: 238 NISYSSLGDKGAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGA 297
Query: 268 GSFKPPRSLKLLDLHGGWLLTEDA 291
+ L L + G L++++
Sbjct: 298 KHISTMKELTKLYMQGNRLISDEG 321
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 32/302 (10%)
Query: 3 PRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
L++LN++ GV IS L+ L + + ++I G E ++ + T I
Sbjct: 160 KNLTYLNISENDIGVEGAKYISELKQLTDLDISYNNI--GTEGAKYISDLKQLTTLDIES 217
Query: 61 R----EAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA 113
E YI E + L L++S SSL ++++MK L HL +S S+I + + ++
Sbjct: 218 NNIGTEGAKYISELNQLQVLNISYSSLGDKGAQYISEMKQLTHLYISDSLIRSEGAKYIS 277
Query: 114 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS---LSGTQ-IDDYAISYMSMMPSLK 169
+ L NL + N G A H+ ++ L+ + G + I D Y+S + +L
Sbjct: 278 EM-KQLTNLFIENNDIDDEG----AKHISTMKELTKLYMQGNRLISDEGAKYLSELKNLT 332
Query: 170 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+ I + ++G E L L +L + + T++ D LS +L
Sbjct: 333 VLFIGDN-------RIGNE-----GAKHLSELKNLTSIYVSYTEIGDEGAKYLSELNKLT 380
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
L + + +S+L +LT L I+ + N G + L LD+ + TE
Sbjct: 381 ILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISELKQLTDLDISYNNIGTE 440
Query: 290 DA 291
A
Sbjct: 441 GA 442
>gi|406830743|ref|ZP_11090337.1| hypothetical protein SpalD1_03864 [Schlesneria paludicola DSM
18645]
Length = 304
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 30/226 (13%)
Query: 68 ETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
E + FL ++ L + L ++L+ L +S + I DDS +++ LR+L +
Sbjct: 71 ELPAIEFLGTGDTELQPATLRALQGKRSLKRLSISFAKISDDSAKLLG----TLRSLEVL 126
Query: 126 NTRFSSAGVGILAGHLPNL---EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
R + G + NL + L+LS DD A+ + MP LK + + + F+
Sbjct: 127 ELRAQVEIHPKVLGEVFNLTSLKELTLSDRLADDPAMEELRRMPYLKTLTVRSV----FV 182
Query: 183 QQVG-AETDLVLSLTAL----------QNLNHLERLNLEQTQ-----VSDATLFPLSTFK 226
G A V SL L + + HL L+L V+D L L FK
Sbjct: 183 SDAGLASLRQVKSLRNLRILLGPKVTEEGVRHLSELDLADLDITYLNVTDKELKSLRKFK 242
Query: 227 ELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
L L L +A+ +TD ++ LS LS+L L I DA L+ +G+G +
Sbjct: 243 GLKGLRLVSAAKVTDEAVPFLSELSELKRLDIADAKLSKAGIGQLE 288
>gi|332661885|ref|YP_004451355.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337382|gb|AEE54482.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1141
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 61/223 (27%)
Query: 72 LSFLDVS----------------------NSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 109
LSFLD+S ++ +S L+ + L LDLS + + D S
Sbjct: 160 LSFLDLSYTQVTDLSDLSTLSNLNSLNLSDTQVSDLDALSALSNLSFLDLSFTQVSDLSG 219
Query: 110 EMVA----------CVGANLRNL----NLSNTRFSSAGVGILA--GHLPNLEILSLSGTQ 153
++LR+L NLS+ + SS V L+ HL NL L LS TQ
Sbjct: 220 LSTLSNLSSLNLRDTYSSDLRSLRPLINLSDLKLSSTEVSDLSVLAHLHNLSSLHLSYTQ 279
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 213
+ D +S +S + +L F+D+S+T + L+AL L +L LNL TQ
Sbjct: 280 VSD--LSALSALSNLSFLDLSDTQVS--------------DLSALSALYNLSFLNLSNTQ 323
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
+SD LS + L++LS+ + S T+++ L++L L NL+
Sbjct: 324 ISD-----LSALRHLLNLSIIDLSSTELT--DLTTLRHLQNLN 359
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 22/195 (11%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN-LNLSNTRFS 130
LSFLD+S++ +S L+ + L L+LS++ I D S LR+ LNLS S
Sbjct: 292 LSFLDLSDTQVSDLSALSALYNLSFLNLSNTQISDLSA---------LRHLLNLSIIDLS 342
Query: 131 SAGVGILAG--HLPNLEILSLSGTQIDDY-AISYMSMMPSLKFIDISNTDIKGF-----I 182
S + L HL NL ++L+ T D A+S +S + L D +D+ +
Sbjct: 343 STELTDLTTLRHLQNLNSINLNKTHASDLSALSNLSNLSELYLSDTQASDLSALSALFNL 402
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
+ V L+AL NL +L L+L T+V D L PL+ + L L L + + D+S
Sbjct: 403 NSLNLSYTQVSGLSALANLQNLSSLDLGDTEVFD--LSPLANLQNLSSLDLSDTEVVDLS 460
Query: 243 LHQLSSLSKLTNLSI 257
+ +LSKL L++
Sbjct: 461 --PMINLSKLKYLNL 473
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 70/285 (24%)
Query: 7 FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE---A 63
L+L+ G+T+LP+ L +C + ++SL + N+ E
Sbjct: 50 ILDLSGLGLTELPD-------ELWDCVW------------VQELSLGHAYYWNDEEQVWK 90
Query: 64 FLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
++Y T +++ + LS F ++ ++ L HL L + +GD + ++ + L+++
Sbjct: 91 WVYGRTGIIA------NDLSSFPPAVSNLRHLTHLFLDGTRLGD--LYPLSNL-IYLKHI 141
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--------------------ISYM 162
NLS TR + + GHL NL L LS TQ+ D + + +
Sbjct: 142 NLSRTRLPNL---VTLGHLSNLSFLDLSYTQVTDLSDLSTLSNLNSLNLSDTQVSDLDAL 198
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQV 214
S + +L F+D+S T + L L +L+ L +L L L T+V
Sbjct: 199 SALSNLSFLDLSFTQVSDLSGLSTLSNLSSLNLRDTYSSDLRSLRPLINLSDLKLSSTEV 258
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
SD LS L +LS + S T VS LS+LS L+NLS D
Sbjct: 259 SD-----LSVLAHLHNLSSLHLSYTQVS--DLSALSALSNLSFLD 296
>gi|329767691|ref|ZP_08259210.1| hypothetical protein HMPREF0428_00907 [Gemella haemolysans M341]
gi|328839041|gb|EGF88629.1| hypothetical protein HMPREF0428_00907 [Gemella haemolysans M341]
Length = 1408
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 36/155 (23%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIKG 180
+PN+E+L + T IDD S++ +P+L+ ID S DI+
Sbjct: 702 MPNIEVLGIGYTSIDDITPVYKFKKLKQLYVSRTGIKDYSFIKNIPTLEGIDFSENDIQD 761
Query: 181 F--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
++ V A + + ++ L+NL +LE LNL+ ++ D +S K+L H
Sbjct: 762 ISFLKDYPNLKLVSAAGNNIENIDVLKNLTNLESLNLDNNKIKD-----ISALKDLNH-- 814
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
LR SL + ++ +L +LS L R + +N GL
Sbjct: 815 LRAVSLENNNITKLDALSNKNELE-RLFLSSNGGL 848
>gi|326679785|ref|XP_002660968.2| PREDICTED: hypothetical protein LOC100332407 [Danio rerio]
Length = 537
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 44/286 (15%)
Query: 5 LSFLN---LAWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFIN 59
LSFLN + G++ L N+S L+ LNLS+C+ DS L+ L ++L T ++
Sbjct: 167 LSFLNSPLITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQHITGLRSLTFLAL-DQTKVS 225
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
+ LY++ S SS AL L L+ + I + ++ ++ L
Sbjct: 226 DAGLLLYLQ---------SGSS-----------ALCQLSLNQTAITESTLRVLPASVPQL 265
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
R L++ +T+ S V LA L NL+ L L GT + + ++ ++ PSL + ++ +
Sbjct: 266 RMLSIKHTKVSD--VSALA-ELKNLQTLHLDGTGVQENSLQCLASHPSLSALSLAGIPVA 322
Query: 180 GFIQQVGAETDLVLSLTAL--------QNLNHLER-------LNLEQTQVSDATLFPLST 224
+ L L+ L L+ L R + TQ++D + LS+
Sbjct: 323 DGNHTLEIIAGLRLTQLTLPGRHSVTDSGLSFLSRQTLLLELDLTDYTQLTDHGITQLSS 382
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
L LSL N ++D L L L +L L + +T+ G+ +
Sbjct: 383 MTRLKKLSLSNTQVSDSGLQGLIRLKELQELCLDRTAVTSRGVAAL 428
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L+ M L+ L LS++ + D ++ + + L+ L L T +S GV L HLP+L+++
Sbjct: 380 LSSMTRLKKLSLSNTQVSDSGLQGLIRL-KELQELCLDRTAVTSRGVAALITHLPHLQVM 438
Query: 148 SLSGTQIDDYAISY-MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L+ TQ+ D I + P L +++S T I TD Q L L R
Sbjct: 439 GLASTQVGDTVIRRGLVHCPQLLKLNLSRTRI----------TD--------QGLKFLCR 480
Query: 207 LNLEQTQVSDATLFPLSTFKELI----HLSLRNASLT 239
+ L Q + D T L LI HLS AS T
Sbjct: 481 MQLSQVNL-DGTGVTLVGIANLISACPHLSSVRASHT 516
>gi|317495623|ref|ZP_07953990.1| hypothetical protein HMPREF0432_00592 [Gemella morbillorum M424]
gi|316914242|gb|EFV35721.1| hypothetical protein HMPREF0432_00592 [Gemella morbillorum M424]
Length = 982
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 22/139 (15%)
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSL 195
L+ L +S T I DY S++ +P+L+ ID S D++ ++ V A + + ++
Sbjct: 628 LKQLYVSRTGIKDY--SFIKNIPTLEGIDFSENDVQDISFLKDYPNLKLVAAAGNNIKNI 685
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL---SLRNASLTDV-SLHQLSSLSK 251
L+NL +LE LNL+ ++SD +S K+L HL SL N ++T + +L+ S LS+
Sbjct: 686 DVLKNLKNLESLNLDNNKISD-----ISALKDLAHLKAVSLENNNITKLDALNNKSELSR 740
Query: 252 L---TNLSIRDAVLTNSGL 267
L N + A L N+ L
Sbjct: 741 LFLSNNSGLELATLKNNNL 759
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQNLNHL 204
LSL+G Q+ D I ++ + +L +D++N I G T+L L + N++ +
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPI 255
Query: 205 E------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
E L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 EGLTALTSLELHENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|85679270|gb|ABC72051.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|156549435|ref|XP_001603185.1| PREDICTED: chaoptin-like [Nasonia vitripennis]
Length = 1358
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 156
+DLS +MI S + V L L+LS R +S G L NL L+L+G Q+
Sbjct: 450 IDLSGNMIPTVSQQTFLGVEDTLIFLDLSYNRLTSVG----ELQLRNLVSLNLAGNQLRK 505
Query: 157 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL--SLTALQNLNHLERLNLEQTQV 214
+ + L++++IS+ + G V T L L S T LQ L + LNLE +
Sbjct: 506 VSPETFKHLQRLQYLNISDNPLYGGFPPVFPRTLLSLDVSRTGLQVLPAILLLNLEYLET 565
Query: 215 SDAT-----LFPLSTFKELIHLS---LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
T L TFK ++LS L N ++T++ + L+ L +L++ L G
Sbjct: 566 VSLTGNKLQLLSEGTFKNHLNLSSIDLSNNAITELGNGTFAGLANLYSLNLSANKLRVFG 625
Query: 267 LGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 302
F L+LLDL L ED +HPR+
Sbjct: 626 GEHFDTGTGLQLLDLSNNLL--EDLTTTAFLIHPRL 659
>gi|46447626|ref|YP_008991.1| hypothetical protein pc1992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401267|emb|CAF24716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 537
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 119 LRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 176
LR L+LS R + AG+ L L L+ L LS + + D +++++ + +L ++D+S
Sbjct: 291 LRRLDLSFCRNLTDAGLANLTP-LIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLS-- 347
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRN 235
I G + G + LT L +L HL NL Q +SDA L L + L HL L
Sbjct: 348 -ICGKLTDAG-----LAHLTPLVDLQHL---NLRYCQKLSDAGLAHLRSLVTLQHLDLSY 398
Query: 236 A-SLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+LTD L L+ L+ L +LS+ R LT +GL +P +L+ LDL LT D +
Sbjct: 399 CQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGL 457
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 88 LTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLE 145
LT + AL+HLDLS + D + + +GA L L+LS + + AG+ L L +L+
Sbjct: 310 LTPLIALQHLDLSWCKNLTDAGLAHLTPLGA-LHYLDLSICGKLTDAGLAHLTP-LVDLQ 367
Query: 146 ILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS----LTALQN 200
L+L Q + D ++++ + +L+ +D+S + Q + TD L+ LTALQ+
Sbjct: 368 HLNLRYCQKLSDAGLAHLRSLVTLQHLDLS------YCQNL---TDAGLAHLARLTALQH 418
Query: 201 LN-------------HLERL----NLEQTQVSDATLFPLSTFKELIHLSLRN----ASLT 239
L+ HL L +L+ + T L FK L L N LT
Sbjct: 419 LSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLT 478
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
D L LS L L +L + +T++GL KP +L+ L L
Sbjct: 479 DAGLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGL 520
>gi|260826530|ref|XP_002608218.1| hypothetical protein BRAFLDRAFT_87869 [Branchiostoma floridae]
gi|229293569|gb|EEN64228.1| hypothetical protein BRAFLDRAFT_87869 [Branchiostoma floridae]
Length = 729
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
Query: 90 QMKALEHLDLSSSMIGDDSVEMVA---CVGANLRNLNLSNTRFSSAGVGILAG---HLPN 143
Q +E L+L +IGD+ V ++A C L++L+LSN +S+G +A HL
Sbjct: 531 QQADVEQLELGVCLIGDEEVALLAEMFCYLPCLKHLDLSNNMITSSGALAVAAHISHLQQ 590
Query: 144 LEILSLSGTQIDDYAISYMSM----MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
LE L LSG I + ++ M+ + LK+++ + + V T L+L+L+ ++
Sbjct: 591 LEWLDLSGNNIGEVGVTAMNEKLVNLEKLKYVNFNMNSVT-----VNMRTCLLLTLSNME 645
Query: 200 NLNHL 204
NL+ +
Sbjct: 646 NLSEV 650
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQNLNHL 204
LSL+G Q+ D I ++ + +L +D++N I G T+L L + N++ +
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPI 255
Query: 205 E------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
E L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 EGLTALTSLELHENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|386042670|ref|YP_005961475.1| internalin [Listeria monocytogenes 10403S]
gi|404409572|ref|YP_006695160.1| internalin I [Listeria monocytogenes SLCC5850]
gi|345535904|gb|AEO05344.1| internalin [Listeria monocytogenes 10403S]
gi|404229398|emb|CBY50802.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 1778
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 2 FPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L +LN++ + V+ L N SL +N+SN I ++ G + P K A I
Sbjct: 477 LPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLKEFYAQNNSI 534
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--------- 109
++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 535 SDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLET 592
Query: 110 -----EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
++ +G NL ++ N F+ G LPNLE L +S ++ M
Sbjct: 593 FNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTM 652
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+P L+ +D+ N ++ G E + L++L +L +L LNL D + L
Sbjct: 653 DGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNVYID-DISGL 703
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
ST LI+L+L + + D+ S+LS LTNL
Sbjct: 704 STLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 32/299 (10%)
Query: 2 FPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTT 56
P+L L N T +T + ++ L+ L L C I SI G + P L K+ L
Sbjct: 388 LPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKENQ 445
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 446 ITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVS---TLTNF 499
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 175
+L +N+SN + G LP+L+ I D IS + MP+L+ +D SN
Sbjct: 500 PSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNN 554
Query: 176 --TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
T+I F +Q + ++ + S + + +L LE N + +++ + T L
Sbjct: 555 LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IGTMDNL 609
Query: 229 IHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
++ N S + SL + L L L + D LG+ L++LDL +L
Sbjct: 610 PDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
>gi|146321433|ref|YP_001201144.1| leucine-rich repeat-containing protein [Streptococcus suis 98HAH33]
gi|145692239|gb|ABP92744.1| Leucine-rich repeat (LRR) protein [Streptococcus suis 98HAH33]
Length = 429
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 141 LPNLEILSLSGTQIDDYA--------------------ISYMSMMPSLKFIDISNTDIK- 179
+PN+E+L + T IDD ++ +P+L+ ID+S +
Sbjct: 109 MPNVEVLGIGFTPIDDVKPILQFKKLKQLWMTSTGVKDYQFLKEIPTLEGIDLSQNGVSD 168
Query: 180 -GFIQQ------VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
GF+++ V A + + +T L L LE LNL+ +V+D L PL+ +L +S
Sbjct: 169 LGFLEEFPNLKVVSAAGNDIEDITILAKLKALESLNLDHNKVTD--LSPLADLSQLTAVS 226
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
L N +TD+S L + KLT L I
Sbjct: 227 LDNNRITDLS--ALQNKKKLTRLYI 249
>gi|157866007|ref|XP_001681710.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68125008|emb|CAJ02922.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 760
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 89 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP------ 142
++MK+L L+L + + + + +LR LNL T+ S G LP
Sbjct: 251 SEMKSLTSLELEGTQVSGTLPPGWSSI-KSLRTLNLEGTQVS--------GSLPPQWVSM 301
Query: 143 -NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD--LVLSLTALQ 199
+L L+L GTQ+ S M SL +++ T + G + +E L+L Q
Sbjct: 302 ASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPLGWSEMKSLRTLNLEGTQ 361
Query: 200 ----------NLNHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSS 248
++ L LNLE TQVS TL P S K L +L L L+ +
Sbjct: 362 VSGSLPPQWVSMASLRTLNLEGTQVS-GTLPPGWSEMKSLTNLYLEGTQLSGSLPTEWRG 420
Query: 249 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ LTNL ++ ++ S + SL+ LDL G
Sbjct: 421 IKSLTNLYLKGTQVSGSLPPQWSSLTSLRTLDLEG 455
>gi|369938141|gb|AEX25765.1| toll-like receptor 2 type 2 [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|369938034|gb|AEX25761.1| toll-like receptor 2 type 2 [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|290981600|ref|XP_002673518.1| predicted protein [Naegleria gruberi]
gi|284087102|gb|EFC40774.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACV--------GANLRNLNLSN------------- 126
L+++ L HL+L+ +G +E ++ + +N+ + L N
Sbjct: 140 LSEISNLNHLNLNGVDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLF 199
Query: 127 -TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----F 181
F S + L L NL+ LSL+ +IDD + Y+S++ SL+++ +S +I F
Sbjct: 200 GNNFGSESLRHLV-KLSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQF 258
Query: 182 IQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
I ++ + L L + + + +L +LNL + + + LS K+L L L
Sbjct: 259 ISKLENLSQLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDL 318
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
+ D S+ L + L L+I L+ + + + K SLKL+
Sbjct: 319 DGTKIDDFSIEHLCLMKNLQYLNIERTNLSETKVETLK--ESLKLV 362
>gi|290994068|ref|XP_002679654.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093272|gb|EFC46910.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 338
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 38/180 (21%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ ++K L +LD+S + I D V G G L L L
Sbjct: 86 IEKLKNLTYLDISENYIFDKLVNW-----------------------GKSFGKLDKLTHL 122
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
++S +I+ I Y++ M L+ +DIS +I L + N+N L L
Sbjct: 123 NISKNRIERKGIKYLTRMKQLRILDISCNNID------------YCGLFLICNMNQLTNL 170
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
N+ + + + +++ L +L L +R +T VS LS+ +KLTNL + ++ N G+
Sbjct: 171 NISRNFIKEKSIY-LVDLNQLTTLIVRQNDITQVSF--LSNFTKLTNLDVSQNLIGNEGI 227
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 14 GVTKLPNISSLECLNLSNCTIDS---ILEGNENKAPLAKISLAGTTFINEREAFLYIETS 70
G+ L + L L++S ID L N N+ IS FI E+ +L ++ +
Sbjct: 133 GIKYLTRMKQLRILDISCNNIDYCGLFLICNMNQLTNLNIS---RNFIKEKSIYL-VDLN 188
Query: 71 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
L+ L V + +++ FL+ L +LD+S ++IG++ ++ V + +L L +T F
Sbjct: 189 QLTTLIVRQNDITQVSFLSNFTKLTNLDVSQNLIGNEGIKFVGEM-KHLTCLRACSTGFD 247
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKG--FIQQVG 186
G + G L L L +S I + + ++S + L + + + D++G FI ++
Sbjct: 248 EEGAKCI-GQLSQLTCLDVSHNSIKNQGVEFISQLSYLTDLTVIHCHIDLEGVEFITKMN 306
Query: 187 AETDLVLSL 195
T L +SL
Sbjct: 307 QLTRLDISL 315
>gi|290972876|ref|XP_002669176.1| predicted protein [Naegleria gruberi]
gi|284082720|gb|EFC36432.1| predicted protein [Naegleria gruberi]
Length = 390
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS-NTRFSSAGVGILA-------- 138
++K L LD+S+ + D E +A +G L+ L++S N+ + G+GI++
Sbjct: 25 ELKYLTSLDISNKHLSD---EYIATIGNWDTLKELDVSLNSDITERGIGIISEKSLLNKL 81
Query: 139 ---------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIK 179
+ NL L++ T +D I ++S M L IDIS TD
Sbjct: 82 SVHSMTISTKGFELISRMKNLTDLNIMQTVLDIEKIKFISEMEQLTAIDISFNNIGTDEL 141
Query: 180 GFIQQV------GAETDLVLSLTA--LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
G I ++ A + + S A +++L HL L++ Q+ + + + L HL
Sbjct: 142 GLICKLEKLRILKANGNQINSDGAKLIKDLKHLTHLSINNNQIGKEGVKCIGELEHLTHL 201
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
++ + + D L + L +L LSI D + G+ L LD+H
Sbjct: 202 AVGSNRIKDKGLKYIGRLQRLNFLSIYDNGIKGKGVKYLSSLSRLVTLDIH 252
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLE 145
+ +K L HL ++++ IG E V C+G +L +L + + R G+ + G L L
Sbjct: 168 IKDLKHLTHLSINNNQIGK---EGVKCIGELEHLTHLAVGSNRIKDKGLKYI-GRLQRLN 223
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
LS+ I + Y+S + L +DI + I T L+ +T L++L+
Sbjct: 224 FLSIYDNGIKGKGVKYLSSLSRLVTLDIHSNGIDS-----SKTTKLISEMTQLRSLD--- 275
Query: 206 RLNLEQTQVSDA----TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+SD + ++ K+L L++ LTD +S LS+LT L IR
Sbjct: 276 --------ISDNYFGNSFKCITNLKQLTKLNISENDLTDKFASSISQLSQLTYLDIR 324
>gi|390335362|ref|XP_003724129.1| PREDICTED: uncharacterized protein LOC100890653 [Strongylocentrotus
purpuratus]
Length = 990
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GILAGHLPNLEI 146
+T +K L+HL+LS++ D V ++L L L T + AG+ +A PNL
Sbjct: 664 ITSLKKLQHLNLSNNKSLTDKVFQTVQEFSSLTTLLLEGTGVTDAGLETFVAVPPPNLTN 723
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL-----------SL 195
LSL+ T + D A+ +++ + LK + + T +K ++ VG + LV +L
Sbjct: 724 LSLNRTNVTDMAVLFLARLSKLKNLGLEQTQVKS-LEHVGHLSQLVSLNVSRNRLQRDAL 782
Query: 196 TALQNLNHLERLNLEQTQ--VSDATLFPLSTFKELIHLSLRN------------------ 235
L + HL+ L++ + D L L +L+ LSL +
Sbjct: 783 LKLHQVTHLKVLHISHVEGITGDEALTCLQGL-QLMQLSLPDRHTTTDNGLKCIAGMSLC 841
Query: 236 -------ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
+++TD +H L+ ++ L LSI + +T++G+
Sbjct: 842 SIDLTDYSNITDAGIHHLADMTSLHKLSITNTKVTSAGM 880
>gi|223698886|gb|ACN19164.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIGDI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|369938003|gb|AEX25760.1| toll-like receptor 2 type 2 [Gallus gallus]
gi|369938087|gb|AEX25763.1| toll-like receptor 2 type 2 [Gallus gallus]
gi|369938113|gb|AEX25764.1| toll-like receptor 2 type 2 [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|237871901|gb|ACR26393.1| TLR2B [Gallus gallus]
gi|237871907|gb|ACR26396.1| TLR2B [Gallus gallus]
gi|237871909|gb|ACR26397.1| TLR2B [Gallus gallus]
gi|237871911|gb|ACR26398.1| TLR2B [Gallus gallus]
gi|237871915|gb|ACR26400.1| TLR2B [Gallus gallus]
gi|237871917|gb|ACR26401.1| TLR2B [Gallus gallus]
gi|237871923|gb|ACR26404.1| TLR2B [Gallus gallus]
gi|237871925|gb|ACR26405.1| TLR2B [Gallus gallus]
gi|237871927|gb|ACR26406.1| TLR2B [Gallus gallus]
gi|237871929|gb|ACR26407.1| TLR2B [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|38154344|gb|AAR12159.1| internalin A [Listeria monocytogenes]
Length = 685
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 46 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 98
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 99 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 158
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 159 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 209
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 210 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 269
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|290988772|ref|XP_002677066.1| predicted protein [Naegleria gruberi]
gi|284090672|gb|EFC44322.1| predicted protein [Naegleria gruberi]
Length = 289
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++++ L +L++ ++ I D+ +E ++ + NL +L +S+ R +S ++ L NL +L
Sbjct: 102 ISELRNLTYLNIGNNPINDEGIESISQLD-NLTDLTVSSLRITSKSAKFIS-KLNNLTLL 159
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+++ I D ++S + SLK +DIS + G I +GA+ ++ L+ L L
Sbjct: 160 NIAYNNIGDEGAKFISEIKSLKILDIS---LNG-ISPIGAK--------SISELDQLTVL 207
Query: 208 NLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+ Q + D +S K+L L +++ + + +S + KLT+L I + + G
Sbjct: 208 YISQNFSIGDEGARMISEMKQLNELYIQDCFIGNAGAISISRMDKLTHLDISENEIQIEG 267
Query: 267 LGSFKPPRSLKLLDLHG 283
+ + L L + G
Sbjct: 268 ESVIRDMKHLSYLSIEG 284
>gi|423398544|ref|ZP_17375745.1| hypothetical protein ICU_04238, partial [Bacillus cereus BAG2X1-1]
gi|401647022|gb|EJS64634.1| hypothetical protein ICU_04238, partial [Bacillus cereus BAG2X1-1]
Length = 779
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 38/257 (14%)
Query: 29 LSNCTIDSILEGNENKAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLSRF 85
++N +D L+ + NK L + + INE +E L I+T + S ++
Sbjct: 187 VANVIVDKKLQQHINKYNLDRKN------INEPITKEDLLKIKTLTI----YSGEGINEI 236
Query: 86 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPN 143
L MK LE L L + + D ++ + L+ L+LS+ S +L N
Sbjct: 237 AGLEYMKNLEKLTLRETNVTD-----ISAISELRYLKFLDLSSNLIESIQP---VSNLEN 288
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDLVLSLTALQNL 201
L++L L +I D ++ +S M +K +D+ +IK + V + +L L+ + NL
Sbjct: 289 LDMLFLRDNKIAD--LTPLSQMKKIKTLDLIGNNIKDLTPLFTVASVKELYLANNQISNL 346
Query: 202 NHLERLN------LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ +E+LN + Q+SD P+S +LI L + ++ L D+S LS L KL L
Sbjct: 347 SGIEKLNNVKLLWIGNNQISDVE--PISKMSKLIELEIADSDLKDIS--PLSKLGKLQVL 402
Query: 256 SIRDAVLTN-SGLGSFK 271
++ + +++ S LG K
Sbjct: 403 NLEENFISDISALGELK 419
>gi|369938062|gb|AEX25762.1| toll-like receptor 2 type 2 [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|390350283|ref|XP_001179919.2| PREDICTED: toll-like receptor 3-like [Strongylocentrotus
purpuratus]
Length = 648
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 34/253 (13%)
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
F++++ LLS+ V++ S FC LT L LD+SS+ + E AC+ NL L
Sbjct: 182 GFIWLKKLLLSYNKVTSLSNESFCLLTS---LIELDVSSNKLVALPPETFACL-PNLTTL 237
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTDI--- 178
++SN + G + + ++SLSG +I D I + + +L+ +DISN DI
Sbjct: 238 DVSNNLLQNISPQSFDG-MSLIRLISLSGNRITDLNIGKRLWTLGTLRVLDISNNDIPFI 296
Query: 179 -----KGF--IQQVGAETDLVLSLT--ALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
KG +Q + + + S + A +L L +L+L + +V + TFK+L
Sbjct: 297 SKGRFKGLTNLQVLDVSNNQLTSYSENAFTDLVLLRKLHLSREKV----VLLKDTFKQLR 352
Query: 230 HLSLRNASLTDV-----SLHQLSSLSKLTNLSIRDAVLTNSGLGS-------FKPPRSLK 277
+ + S TD+ S+ Q +++ L +L++ A L ++ L + F SLK
Sbjct: 353 TVLYLDLSYTDIQVSRSSIEQFYNMTCLVDLNLERAELRDTDLYNGINNRSLFSGLFSLK 412
Query: 278 LLDLHGGWLLTED 290
L L+ +L++ D
Sbjct: 413 KLRLNDNYLVSLD 425
>gi|237871867|gb|ACR26376.1| TLR2B [Gallus gallus]
gi|237871869|gb|ACR26377.1| TLR2B [Gallus gallus]
gi|237871871|gb|ACR26378.1| TLR2B [Gallus gallus]
gi|237871873|gb|ACR26379.1| TLR2B [Gallus gallus]
gi|237871875|gb|ACR26380.1| TLR2B [Gallus gallus]
gi|237871877|gb|ACR26381.1| TLR2B [Gallus gallus]
gi|237871879|gb|ACR26382.1| TLR2B [Gallus gallus]
gi|237871881|gb|ACR26383.1| TLR2B [Gallus gallus]
gi|237871883|gb|ACR26384.1| TLR2B [Gallus gallus]
gi|237871885|gb|ACR26385.1| TLR2B [Gallus gallus]
gi|237871887|gb|ACR26386.1| TLR2B [Gallus gallus]
gi|237871889|gb|ACR26387.1| TLR2B [Gallus gallus]
gi|237871891|gb|ACR26388.1| TLR2B [Gallus gallus]
gi|237871893|gb|ACR26389.1| TLR2B [Gallus gallus]
gi|237871895|gb|ACR26390.1| TLR2B [Gallus gallus]
gi|237871897|gb|ACR26391.1| TLR2B [Gallus gallus]
gi|237871899|gb|ACR26392.1| TLR2B [Gallus gallus]
gi|237871903|gb|ACR26394.1| TLR2B [Gallus sonneratii]
gi|237871919|gb|ACR26402.1| TLR2B [Gallus gallus]
gi|237871921|gb|ACR26403.1| TLR2B [Gallus gallus]
gi|237871931|gb|ACR26408.1| TLR2B [Gallus gallus]
gi|237871933|gb|ACR26409.1| TLR2B [Gallus gallus]
gi|237871935|gb|ACR26410.1| TLR2B [Gallus gallus]
gi|237871937|gb|ACR26411.1| TLR2B [Gallus gallus]
gi|237871939|gb|ACR26412.1| TLR2B [Gallus gallus]
gi|237871941|gb|ACR26413.1| TLR2B [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|190410015|ref|YP_001965539.1| probable peroxidase protein [Sinorhizobium meliloti SM11]
gi|125631045|gb|ABN47046.1| probable peroxidase protein [Sinorhizobium meliloti SM11]
Length = 1174
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 156
L+L + + D + M+ + L ++L +TR ++ G+ LAG NL+ L+L GTQ+D
Sbjct: 1027 LELRETQVSDAEIPMIGKL-PRLHCIDLPHTRVTAKGIAELAGMSVNLQSLALDGTQVDT 1085
Query: 157 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 216
++ M++ P L + + G E D AL L L+L T +SD
Sbjct: 1086 GSVGAMALAPRLLELYL-----------YGDEVD--TRTIALLGSVRLRELHLLGTNISD 1132
Query: 217 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+ L+ L LSL +A+L+D +L L SL +S+R
Sbjct: 1133 DAVPHLAAIAGLRFLSL-DANLSDDALLALRSLRPHLLVSLR 1173
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 72 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN-LNLSNTR 128
LS LD+S +++S L A+ L LS + I D E A V + R +++S T+
Sbjct: 731 LSRLDLSGTAVSDKGVTSLASAFAISELSLSRTEITD---EAAAAVFSRPRQAVDVSWTQ 787
Query: 129 FSSAGVGILAGHLPN-LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
S GI+ G P L+ + +G IDD S++ SL+ ID+S+T +VG
Sbjct: 788 VSQ--TGIVTGQSPEALQKGNFAGLDIDDSFASWLRAAASLREIDLSHT-------RVGD 838
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSD 216
+ AL +L LE+ NL T D
Sbjct: 839 DV-----AGALGDLRFLEQANLSNTHTMD 862
>gi|369937973|gb|AEX25759.1| toll-like receptor 2 type 2 [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|237871913|gb|ACR26399.1| TLR2B [Gallus gallus]
Length = 732
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|56797881|emb|CAH04902.1| internalin A [Listeria monocytogenes]
Length = 773
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + +LE LD+SS+ + D + ++A + NL +L +N + S +GILA NL+
Sbjct: 176 LANLTSLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILA----NLDE 228
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN---- 200
LSL+G Q+ D I ++ + +L +D++N I G T+L L + N
Sbjct: 229 LSLNGNQLKD--IGTLASLTNLTDLDLANDQISNLAPLSGLTKLTELKLGANQISNISPL 286
Query: 201 --LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 287 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 339
>gi|423607623|ref|ZP_17583516.1| hypothetical protein IIK_04204, partial [Bacillus cereus VD102]
gi|401239997|gb|EJR46402.1| hypothetical protein IIK_04204, partial [Bacillus cereus VD102]
Length = 814
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IEDVSGLEYMKNLENLTLEEVKLENIKFISDLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 438
>gi|85679299|gb|ABC72065.1| InlE [Listeria monocytogenes]
Length = 488
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 83 AGITTI---EGLQYLTN--LSELELIDNQVTDLSPLTNLTKITELRLSGNPLKDVS---- 133
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 134 ALAGLKNLKRMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLADLSNLQFL 188
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN E ++VSD + PL++ L +
Sbjct: 189 SFGSTQVS--------------DLTPLTNLSKLTTLNAEDSKVSD--ISPLASLSNLTEV 232
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL N+SI LTN
Sbjct: 233 YLEENQISDV-----SPLAKLPNVSI--VALTN 258
>gi|223698664|gb|ACN19016.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|47096523|ref|ZP_00234114.1| internalin C2 [Listeria monocytogenes str. 1/2a F6854]
gi|254913499|ref|ZP_05263511.1| internalin C2 [Listeria monocytogenes J2818]
gi|254937920|ref|ZP_05269617.1| internalin C2 [Listeria monocytogenes F6900]
gi|386045906|ref|YP_005964238.1| internalin C2 [Listeria monocytogenes J0161]
gi|47015114|gb|EAL06056.1| internalin C2 [Listeria monocytogenes str. 1/2a F6854]
gi|258610529|gb|EEW23137.1| internalin C2 [Listeria monocytogenes F6900]
gi|293591507|gb|EFF99841.1| internalin C2 [Listeria monocytogenes J2818]
gi|345532897|gb|AEO02338.1| internalin C2 [Listeria monocytogenes J0161]
Length = 548
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 103 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 158 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ +TD+S L+++S L
Sbjct: 201 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQITDIS--PLANISNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|374586212|ref|ZP_09659304.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
gi|373875073|gb|EHQ07067.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
Length = 346
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+L L HL+ LNL ++DA L + K L L L +TD + L LS+L
Sbjct: 89 ALVHLAGFKHLKELNLSTGPITDAGLKSIGQIKTLEKLDLAETKITDAGVADLVGLSRLK 148
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
+LS+ D +T++ + S +SL++L L+
Sbjct: 149 DLSLIDTAVTDACMTSIMQMKSLEILQLN 177
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+ LE LSL G D A+ +++ LK +++S G I G L ++
Sbjct: 72 MQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLST----GPITDAG--------LKSIGQ 119
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ LE+L+L +T+++DA + L L LSL + ++TD + + + L L +
Sbjct: 120 IKTLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMT 179
Query: 261 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+T+ G+ + L+ L L GG +T++++
Sbjct: 180 GITDRGVEQLIQHQRLRKLIL-GGTAVTDESV 210
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 45/286 (15%)
Query: 47 LAKISLAGTTFINER----EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 102
L K+SL G + + F +++ LS ++++ L + Q+K LE LDL+ +
Sbjct: 75 LEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITDAGLKS---IGQIKTLEKLDLAET 131
Query: 103 MIGD------------------DSVEMVACVGA-----NLRNLNLSNTRFSSAGVGILAG 139
I D D+ AC+ + +L L L+ T + GV L
Sbjct: 132 KITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQ 191
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
H L L L GT + D ++ Y++ + +L S T I+G L L+
Sbjct: 192 H-QRLRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGK------------GLVRLR 238
Query: 200 NLNHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+L RL L T V D L L EL L L + +T ++ ++ + + +L +
Sbjct: 239 QAKNLRRLWLADTSVDDDDLIELLQPPMELDMLHLGHLKITGKTMEAIARCNCVKDLYVG 298
Query: 259 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
+ N L P LK + + +T+D + F K P + V
Sbjct: 299 YTKIGNDDLLKLIPATRLKSITVTKT-RVTDDGYIPFHKARPDVIV 343
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 81 SLSRFCFLTQMKALEHLDLSS----SMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVG 135
++ ++ + Q+K + ++ + +G EM + L L+L ++ A +
Sbjct: 32 AIEQYVYTGQLKGVTMAEIRAVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALV 91
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 195
LAG +L+ L+LS I D + + + +L+ +D++ T I TD +
Sbjct: 92 HLAG-FKHLKELNLSTGPITDAGLKSIGQIKTLEKLDLAETKI----------TDA--GV 138
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L+ L+ L+L T V+DA + + K L L L +TD + QL +L L
Sbjct: 139 ADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKL 198
Query: 256 SIRDAVLTNSGLG 268
+ +T+ +G
Sbjct: 199 ILGGTAVTDESVG 211
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L ++ LE+L+L +DA L L+ FK L L+L +TD L + + L L +
Sbjct: 69 LLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITDAGLKSIGQIKTLEKLDL 128
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDL 281
+ +T++G+ LK L L
Sbjct: 129 AETKITDAGVADLVGLSRLKDLSL 152
>gi|348503268|ref|XP_003439187.1| PREDICTED: hypothetical protein LOC100705990 [Oreochromis
niloticus]
Length = 894
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 65/272 (23%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLN----LSNCTIDSILEGNENKA-------PLAKISLA 53
L LNL TGVT+ +SLE L L++ T+ I + + A L +I+L
Sbjct: 650 LQTLNLDGTGVTE----ASLEHLATHPALTSLTLVGIPVADGSHALQIISGLKLTRITLP 705
Query: 54 GTTFINEREAFLYIETSLLSFLD------VSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 107
G + + +LLS LD +++ +S LT++K L LS++ + D
Sbjct: 706 GRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKL---SLSNTQVTDA 762
Query: 108 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
+ + C+ L+ L L T +S GV L LP+L++L L+ TQ+ D +
Sbjct: 763 GLPSLRCM-QELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDNVVR------- 814
Query: 168 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
KG I+ + L +LNL +T+++D L + +
Sbjct: 815 -----------KGLIR-----------------CSQLVKLNLSRTRITDHGL----KYLK 842
Query: 228 LIHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 258
+ L+ N T VSL ++SL TN+ SIR
Sbjct: 843 QMRLAQVNLDGTGVSLMGIASLLSCTNINSIR 874
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 13 TGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIET- 69
+G+ L + L+ LNL++C+ DS L+ L +SL T + + LY+++
Sbjct: 541 SGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLCFLSL-DQTKVTDAGMVLYLQSV 599
Query: 70 -SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSN 126
S LS L ++ ++++ ++ L L S I V+ + + A +L+ LNL
Sbjct: 600 PSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLS--IKQTKVKDLTALAAMSSLQTLNLDG 657
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
T + A + LA H P L L+L G + D + + + ++ LK I+ +
Sbjct: 658 TGVTEASLEHLATH-PALTSLTLVGIPVADGSHA-LQIISGLKLTRIT-------LPGRH 708
Query: 187 AETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
+ TD LS L L L L+L + TQ++D + LST L LSL N +TD L
Sbjct: 709 SVTDSGLSF--LSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGLPS 766
Query: 246 LSSLSKLTNLSIRDAVLTNSGLG 268
L + +L L + +T+ G+
Sbjct: 767 LRCMQELQELCLDRTAVTSRGVA 789
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 72 LSFLDVSN-SSLSRFCF--LTQMKALEHLDLSSSMIGDDS-VEMVACVGANLRNLNLSNT 127
L +L++++ S L+ C +T +K L L L + + D V + V + L L+L+ T
Sbjct: 552 LQYLNLASCSKLTDSCLQHITGLKNLCFLSLDQTKVTDAGMVLYLQSVPSCLSQLSLNQT 611
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
+ + +L +P L +LS+ T++ D ++ ++ M SL+ +++ T + + A
Sbjct: 612 AVTETTLAVLPTSVPQLRLLSIKQTKVKD--LTALAAMSSLQTLNLDGTGVTEASLEHLA 669
Query: 188 ETDLVLSLT-----------ALQNLNHLE--RLNLE-QTQVSDATLFPLSTFKELIHLSL 233
+ SLT ALQ ++ L+ R+ L + V+D+ L LS L L L
Sbjct: 670 THPALTSLTLVGIPVADGSHALQIISGLKLTRITLPGRHSVTDSGLSFLSRLTLLSELDL 729
Query: 234 RN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+ +TD + LS+L++L LS+ + +T++GL S +
Sbjct: 730 TDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGLPSLR 768
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 47/211 (22%)
Query: 88 LTQMKALEHLDLSSSMIGDDS-------------VEMVACVG------------ANLRNL 122
L AL+HL L +S + DS + + +C NL L
Sbjct: 521 LRAFTALKHLSLVNSPLITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLCFL 580
Query: 123 NLSNTRFSSAGVGILAGHLPN-LEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKG 180
+L T+ + AG+ + +P+ L LSL+ T + + ++ + + +P L+ + I T +K
Sbjct: 581 SLDQTKVTDAGMVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKVK- 639
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
LTAL ++ L+ LNL+ T V++A+L L+T L L+L + D
Sbjct: 640 -------------DLTALAAMSSLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVAD 686
Query: 241 VSLHQLSSLS--KLTNLSI--RDAVLTNSGL 267
S H L +S KLT +++ R +V T+SGL
Sbjct: 687 GS-HALQIISGLKLTRITLPGRHSV-TDSGL 715
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 108/205 (52%), Gaps = 20/205 (9%)
Query: 67 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 126
+E + L +D+S++ ++ L+ + LE LDLS + I + V ++ + NL L+L +
Sbjct: 114 VELTNLKKVDLSHNQITNVNPLSGLTNLEWLDLSRNQITN--VNPLSEL-TNLEWLDLGH 170
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----- 181
+ ++ + L+G L NLE L+LS QI ++ I +S + +LK I ++N I
Sbjct: 171 NQITN--ISPLSG-LTNLEFLNLSHNQITNFRI--ISALINLKDIALNNNQITDIYPLAE 225
Query: 182 ---IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
++++ + + ++ L L +LE L + Q++D + PLS L L+L + +
Sbjct: 226 LTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQITD--IRPLSQLTNLRQLALNHNQI 283
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLT 263
TD+ LS L+ LT L++ +T
Sbjct: 284 TDI--RPLSQLTNLTGLALSHNQIT 306
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 27/194 (13%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 129
L +LD+S + ++ L+++ LE LDL G + + ++ + NL LNLS+ +
Sbjct: 141 LEWLDLSRNQITNVNPLSELTNLEWLDL-----GHNQITNISPLSGLTNLEFLNLSHNQI 195
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGFIQQVG 186
++ + L NL+ ++L+ QI D I ++ + +L+ I ++N T ++ +Q
Sbjct: 196 TNFRI---ISALINLKDIALNNNQITD--IYPLAELTNLRRISLNNNQITTVRPLVQLTN 250
Query: 187 AET-----DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
E+ + + + L L +L +L L Q++D + PLS L L+L + +TDV
Sbjct: 251 LESLYIGNNQITDIRPLSQLTNLRQLALNHNQITD--IRPLSQLTNLTGLALSHNQITDV 308
Query: 242 SLHQLSSLSKLTNL 255
LS+LTNL
Sbjct: 309 -----RPLSQLTNL 317
>gi|290979019|ref|XP_002672232.1| predicted protein [Naegleria gruberi]
gi|284085807|gb|EFC39488.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ +MK L+ L ++++ IG + + ++ + L LN+ + G ++ + L +
Sbjct: 100 YIGEMKQLKQLHIANNNIGPEGAKHISGL-EQLTILNIRANEITVDGAKFIS-EMKQLTV 157
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN-- 200
L++ G I D ++S M L +DIS +I ++ ++ T L + ++ +
Sbjct: 158 LNIIGNDICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNIGFNSINDCV 217
Query: 201 -----LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ L LN+ + + + +S+F +L HLS+ + S+++ +S + + L
Sbjct: 218 ECFGKMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSIASNSISNYEASHISQMKNVIKL 277
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
I D + ++G+ S L L++ +T I CKM
Sbjct: 278 DISDNRIGDNGVQSISEMNQLTELNV-SSIDITPIGIQYICKM 319
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVA--------------------CVGA--NLRNLNL 124
F++ MK L +LD+S + IG++ + V+ C G L +LN+
Sbjct: 172 FISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNIGFNSINDCVECFGKMKQLTDLNV 231
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+++ G+ + L LS++ I +Y S++S M ++ +DIS+ +
Sbjct: 232 NSSCIGLCGI-VFISSFNQLTHLSIASNSISNYEASHISQMKNVIKLDISDN-------R 283
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+G + ++ +N L LN+ ++ + + L +L + + ++ +
Sbjct: 284 IGDN-----GVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIGVKGAN 338
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
Q+S + L LSI + + + G L L++
Sbjct: 339 QISEMKHLAQLSIYNNAVGDEGAKFISEMEQLTFLNI 375
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 50 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDD 107
I L G FI +F + L+ L ++++S+S + ++QMK + LD+S + IGD+
Sbjct: 236 IGLCGIVFI---SSF-----NQLTHLSIASNSISNYEASHISQMKNVIKLDISDNRIGDN 287
Query: 108 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
V+ ++ + L LN+S+ + G+ + + NL L ++ I + +S M
Sbjct: 288 GVQSISEMNQ-LTELNVSSIDITPIGIQYIC-KMDNLTYLIIAHNNIGVKGANQISEMKH 345
Query: 168 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
L + I N VG E +S + L LN+ ++ D + LS K+
Sbjct: 346 LAQLSIYNN-------AVGDEGAKFIS-----EMEQLTFLNIGSNEIGDEGVKALSGMKQ 393
Query: 228 LIHLSLRNASLTD 240
L L+ + ++++
Sbjct: 394 LTELNTVDNNISE 406
>gi|47091397|ref|ZP_00229194.1| internalin C2 [Listeria monocytogenes str. 4b H7858]
gi|417314311|ref|ZP_12101012.1| internalin H (LPXTG motif) [Listeria monocytogenes J1816]
gi|47020074|gb|EAL10810.1| internalin C2 [Listeria monocytogenes str. 4b H7858]
gi|328467872|gb|EGF38912.1| internalin H (LPXTG motif) [Listeria monocytogenes J1816]
Length = 548
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + +++ L+L++T+ + V
Sbjct: 103 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGL-QSIKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 158 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 201 LTPLANLSKLTNLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|284040762|ref|YP_003390692.1| ribonuclease inhibitor [Spirosoma linguale DSM 74]
gi|283820055|gb|ADB41893.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Spirosoma
linguale DSM 74]
Length = 507
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
N + L L T++SDA L ++ K L L L +TD L QL L+ L L++
Sbjct: 381 NQIVWLKLGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTP 440
Query: 262 LTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 304
+T++GL +SLK + L W ++E+ I + P++EV
Sbjct: 441 VTDAGLAELAELKSLKTVYL---WQTKVSEEGIARLKTALPKLEV 482
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 156
L L + I D ++ VA + NL+ L+L T+ + AG+ L G L LE L+L GT + D
Sbjct: 386 LKLGDTEISDAALAQVAKL-KNLQKLHLEETKVTDAGLKQLKG-LAYLEYLNLYGTPVTD 443
Query: 157 YAISYMSMMPSLKFIDISNTDI 178
++ ++ + SLK + + T +
Sbjct: 444 AGLAELAELKSLKTVYLWQTKV 465
>gi|189234254|ref|XP_973926.2| PREDICTED: similar to toll [Tribolium castaneum]
gi|270002878|gb|EEZ99325.1| toll-like protein [Tribolium castaneum]
Length = 903
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 20/185 (10%)
Query: 108 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
+VE + L L+N F S L NL+ L LS IDD ++ + MP
Sbjct: 107 NVETFEFYASELNACTLTNKYFQS---------LENLKQLILSDNAIDDLDENFFTNMPQ 157
Query: 168 LKFIDISNTDIK---------GFIQQVGAETDLV--LSLTALQNLNHLERLNLEQTQVSD 216
+K +D+ N IK F+Q + ++ + + A Q L L LNL Q++
Sbjct: 158 VKLLDLKNNRIKLTKSTFKNLQFLQHLDLSSNNIKFVPHGAFQELETLTTLNLFDNQLTK 217
Query: 217 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
F + L L L + +S + ++L LT +++ + L G F+ R+L
Sbjct: 218 IDDFTFAGLSNLQSLELSANKIQTISENAFATLKNLTRINLSNNFLKTLPGGLFQGNRNL 277
Query: 277 KLLDL 281
K L L
Sbjct: 278 KTLRL 282
>gi|83629769|gb|ABC26546.1| internalin C2 [Listeria monocytogenes]
gi|83629783|gb|ABC26553.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + +++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGL-QSIKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|356561588|ref|XP_003549063.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO2-like [Glycine max]
Length = 1074
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLE 145
L +K L +LDLS + + + + + +G +L +LNLS T FS + G+L L
Sbjct: 101 LADLKHLNYLDLSGNYFLGEGMSIPSFLGTMTSLTHLNLSQTAFSGK-IPPQIGNLSKLR 159
Query: 146 ILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTDIKGFI-QQVGAETDLVLSLTALQNLNH 203
L LS + AI S++ M SL +D+S T G I Q+G NL++
Sbjct: 160 YLDLSYNDFEGMAIPSFLCAMTSLTHLDLSYTPFMGKIPSQIG-------------NLSN 206
Query: 204 LERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDV--SLHQLSSLSKLTNLSIRDA 260
L L L + + + +S+ +L +L L NA+L+ LH L SL LT+LS+
Sbjct: 207 LVYLGLGGSYDLLAENVGWVSSMWKLEYLYLSNANLSKAFHWLHTLQSLPSLTHLSLSGC 266
Query: 261 VLTNSGLGSFKPPRSLKLLDL 281
L + S SL+ LDL
Sbjct: 267 TLPHYNEPSLLNFSSLQTLDL 287
>gi|335058613|gb|AEH26502.1| leucine-rich repeat domain protein [uncultured Acidobacteria
bacterium A11]
Length = 402
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 156
LDL+++ + +++V + NL LNL+ T + A + LAG L NL +LSL+ +
Sbjct: 160 LDLANTGVAGPGLKVVGTL-KNLERLNLTLTPVTDAHLEHLAG-LTNLRVLSLASAKCTG 217
Query: 157 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 216
++ + L+ + T + L + + LERL + +D
Sbjct: 218 EGFRFLGKLKQLENANFHFTPVNDA------------GLAGISTVTGLERLEIVHCHFTD 265
Query: 217 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
A L+ L L + + T ++ L++L+KL L ++D T G+ SL
Sbjct: 266 AGAPHLAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDNQATAEGVRHASRIPSL 325
Query: 277 KLLDLHG 283
++L +HG
Sbjct: 326 RVLRIHG 332
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 156 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 215
D + ++ +P L +D++NT + G L + L +LERLNL T V+
Sbjct: 145 DAWLDRLADLPDLISLDLANTGVAGP------------GLKVVGTLKNLERLNLTLTPVT 192
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
DA L L+ L LSL +A T L L +L N + + ++GL
Sbjct: 193 DAHLEHLAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTG 252
Query: 276 LKLLDL 281
L+ L++
Sbjct: 253 LERLEI 258
>gi|290989399|ref|XP_002677325.1| predicted protein [Naegleria gruberi]
gi|284090932|gb|EFC44581.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 28/256 (10%)
Query: 18 LPNISSLECLNL----SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
L I LE LN+ SN T + I + N L ++G + + ++ SL S
Sbjct: 122 LMKIKQLESLNIIPHFSNITNEEICKICTNLTNLKDFGISGMSLQYKTLQYITNMKSLTS 181
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSS 131
LD+SN+ L +L ++ + HL +S IGD+ + + A L++LN+ N RF +
Sbjct: 182 -LDISNTELYE-EYLQEIGKMTHL--TSLNIGDNGTIPLQYIKSLAGLKSLNI-NGRFIN 236
Query: 132 AGVGILA--GHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQVGAE 188
G L L +L LS+S I + Y+ P L +DIS +
Sbjct: 237 NGFYELRELKDLHSLTELSVSHNTIKTKGLKYLIDTFPDLTSLDISYNGLG--------- 287
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
S+ ++ L HL +L++ +SD L ++ +L L++ + +TD +S
Sbjct: 288 -----SIKKIRKLKHLTKLDISNNSISDQDLIYITCLPQLTKLNISSNQITDNGALLFAS 342
Query: 249 LSKLTNLSIRDAVLTN 264
+ L N+ +R +TN
Sbjct: 343 MESLRNIDVRFNDITN 358
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|290350830|dbj|BAI78336.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLTPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|308501663|ref|XP_003113016.1| hypothetical protein CRE_25417 [Caenorhabditis remanei]
gi|308265317|gb|EFP09270.1| hypothetical protein CRE_25417 [Caenorhabditis remanei]
Length = 465
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 28/219 (12%)
Query: 117 ANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGT-QIDDYA-ISYMSMMPSLKFIDI 173
A+L+ LNL + + A V ++ NLE L +S QI D + I+ +LK +++
Sbjct: 252 ASLKKLNLLQCFQLTDATVQNISNGAMNLEYLCMSNCNQITDRSLIALGQTSHNLKVLEL 311
Query: 174 SNTDI---KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLST-FKEL 228
S ++ GF+Q LS + LERL++E +SD T+ LS L
Sbjct: 312 SGCNLLGDNGFVQ---------LS----KGCKMLERLDMEDCSLISDITINNLSNQCVAL 358
Query: 229 IHLSLRNASL-TDVSLHQLSSLSKLTNLSIRD----AVLTNSGLGSFKPPRSLKLLDLHG 283
LSL + L TD S+ L + + T L I + LT+S L + R+LK +DL+
Sbjct: 359 RELSLSHCELITDESIQNLVTKHRET-LKILELDNCPQLTDSTLSHLRHCRALKRIDLYD 417
Query: 284 GWLLTEDAILQFCKMHPRIEVWHELS-VICPSDQIGSNG 321
+T++AI++F P IE+ + V P+DQ+ + G
Sbjct: 418 CQNVTKEAIVRFQHHRPNIEIHAYFAPVTPPADQVVNRG 456
>gi|294358395|gb|ADE73850.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290993192|ref|XP_002679217.1| predicted protein [Naegleria gruberi]
gi|284092833|gb|EFC46473.1| predicted protein [Naegleria gruberi]
Length = 310
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 84 RFC--------FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
R+C +LT++ L LD+ + I D ++++ + + L L+++ G
Sbjct: 69 RYCDIGVEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKS-LTKLDVAECEIGDEGCQ 127
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 195
+ L L L+++G I + + M +LK +DISN F GA+
Sbjct: 128 SIT-ELYQLTDLNINGDGIGVGGANCIGQMRNLKSLDISNN----FFGNYGAK------- 175
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
++ L+ LE LN+ + + + ++ L K L LS+ + +TD + L +LT+L
Sbjct: 176 -SISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLSIHHNEITDEGTKYIVELDQLTHL 234
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
I + + G S L L++ + E A
Sbjct: 235 DISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGA 270
>gi|223698643|gb|ACN19002.1| internalin A [Listeria monocytogenes]
gi|223698646|gb|ACN19004.1| internalin A [Listeria monocytogenes]
gi|223698670|gb|ACN19020.1| internalin A [Listeria monocytogenes]
gi|223698673|gb|ACN19022.1| internalin A [Listeria monocytogenes]
gi|223698718|gb|ACN19052.1| internalin A [Listeria monocytogenes]
gi|223698754|gb|ACN19076.1| internalin A [Listeria monocytogenes]
gi|223698757|gb|ACN19078.1| internalin A [Listeria monocytogenes]
gi|223698796|gb|ACN19104.1| internalin A [Listeria monocytogenes]
gi|223698826|gb|ACN19124.1| internalin A [Listeria monocytogenes]
gi|223698829|gb|ACN19126.1| internalin A [Listeria monocytogenes]
gi|223698832|gb|ACN19128.1| internalin A [Listeria monocytogenes]
gi|223698862|gb|ACN19148.1| internalin A [Listeria monocytogenes]
gi|223698895|gb|ACN19170.1| internalin A [Listeria monocytogenes]
gi|223698925|gb|ACN19190.1| internalin A [Listeria monocytogenes]
gi|223698928|gb|ACN19192.1| internalin A [Listeria monocytogenes]
gi|223698931|gb|ACN19194.1| internalin A [Listeria monocytogenes]
gi|223698934|gb|ACN19196.1| internalin A [Listeria monocytogenes]
gi|223698937|gb|ACN19198.1| internalin A [Listeria monocytogenes]
gi|223698940|gb|ACN19200.1| internalin A [Listeria monocytogenes]
gi|223698943|gb|ACN19202.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|290989491|ref|XP_002677371.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
gi|284090978|gb|EFC44627.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
Length = 350
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+ +MK L L ++ + + +++ + +NL LN+SN R + G L + L
Sbjct: 137 IIKEMKQLTVLSIAKNSMQSGGAKLLRNL-SNLTILNISNNRIGNEGWKYLCS-MKQLTK 194
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++SGT I ISY++ P+L ++ S F Q+V + + LT L +N++
Sbjct: 195 LNISGTNISSEGISYLTNFPNLTELNFSGNTSLRFSQKVQEQLSELKYLTKLV-INYIHP 253
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+ ++ Q + ++L LSL++ + D S +S KLT L + L+++
Sbjct: 254 IPIDDLQY-------IHKLEKLTSLSLKSNFMYDASAIHISKCEKLTYLDVAINNLSDAA 306
Query: 267 LGSFKPPRSLKLLDLHGGWL 286
+F +LK L++ +L
Sbjct: 307 AEAFSHLPNLKYLNISENYL 326
>gi|223698976|gb|ACN19224.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|290350826|dbj|BAI78334.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|130774825|gb|ABO32425.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698901|gb|ACN19174.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|338211287|ref|YP_004655340.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336305106|gb|AEI48208.1| hypothetical protein Runsl_1784 [Runella slithyformis DSM 19594]
Length = 502
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
T + L +L++L+LE T ++DAT+ L + L +L+L N +TD + +LS+ L +L
Sbjct: 391 TTVAKLKNLQKLHLENTAITDATVRQLKSLPYLEYLNLVNTQVTDTGIKELSAAKSLRSL 450
Query: 256 SIRDAVLTNSGLGSFK 271
+ + +T +G+ + K
Sbjct: 451 HVWQSKVTETGVAALK 466
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L L T++SD ++ K L L L N ++TD ++ QL SL L L++ + +T++G
Sbjct: 378 LKLGDTKISDQAATTVAKLKNLQKLHLENTAITDATVRQLKSLPYLEYLNLVNTQVTDTG 437
Query: 267 LGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEVWHELSV----ICPSDQIGSN 320
+ +SL+ L + W +TE + + P EV L + I + G
Sbjct: 438 IKELSAAKSLRSLHV---WQSKVTETGVAALKQAKPDAEV--TLGINEQQIAEFIKAGET 492
Query: 321 GPSPSRTSLR 330
P P T +
Sbjct: 493 APKPEETKKK 502
>gi|406831323|ref|ZP_11090917.1| hypothetical protein SpalD1_06790 [Schlesneria paludicola DSM
18645]
Length = 539
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYA 158
S++ +GD ++ ++ + +LR LNLS + G+ L LPNL LS+ ++ D A
Sbjct: 223 SANELGDATLRSISEI-ESLRELNLSECGVTDEGLKSLEK-LPNLTHLSIYQEGRLTDAA 280
Query: 159 ISYMSMMPSLKFIDISNTDIK---GFIQQVGAETDLVLSLTALQNLN------------- 202
+S ++ + LK + ++ T + G + + T+ +++LT L++L+
Sbjct: 281 LSTIAKLKHLKVLTLT-THVGTPLGRMHFSESATNQLIALTELEHLDLSGHDVSTDLLNF 339
Query: 203 -HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
L+ L + + Q D ++ +EL HL + + +TD +L L L LT L IR
Sbjct: 340 PRLKSLRINRNQFDDDLAKAIAKCRELTHLDVSCSEMTDTALEHLRPLPSLTQLHIRAEE 399
Query: 262 LTNSGLGSFKPPRSLKLLDLHGGWL 286
++++ + K +L + LH L
Sbjct: 400 ISDNAIAHLKLFPNLASVTLHTAEL 424
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 124/303 (40%), Gaps = 74/303 (24%)
Query: 5 LSFLNLAWTGVTKLPNISSLECL-NLSNCTIDSILEGNENKAPLAKIS-------LAGTT 56
L LNL+ GVT + SLE L NL++ +I EG A L+ I+ L TT
Sbjct: 241 LRELNLSECGVTD-EGLKSLEKLPNLTHLSI--YQEGRLTDAALSTIAKLKHLKVLTLTT 297
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ + L + S S+ ++ LT+ LEHLDLS G D V
Sbjct: 298 HVG----------TPLGRMHFSESATNQLIALTE---LEHLDLS----GHD-------VS 333
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+L N P L+ L ++ Q DD ++ L +D+S +
Sbjct: 334 TDLLNF-------------------PRLKSLRINRNQFDDDLAKAIAKCRELTHLDVSCS 374
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ TD +L L+ L L +L++ ++SD + L F L ++L A
Sbjct: 375 EM----------TDT--ALEHLRPLPSLTQLHIRAEEISDNAIAHLKLFPNLASVTLHTA 422
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAV--LTNSGLGSFKPPRSLKLLDLH------GGWLLT 288
LTD SL LS + LT L + A + GL +L+ L+L GG L
Sbjct: 423 ELTDKSLEYLSQTASLTKLDLNWATNHFSRHGLEQLANLPNLETLELRIIPFQGGGLKLI 482
Query: 289 EDA 291
DA
Sbjct: 483 RDA 485
>gi|423376128|ref|ZP_17353460.1| hypothetical protein IC5_05176, partial [Bacillus cereus AND1407]
gi|423572735|ref|ZP_17548882.1| hypothetical protein II7_05858, partial [Bacillus cereus MSX-A12]
gi|401089470|gb|EJP97638.1| hypothetical protein IC5_05176, partial [Bacillus cereus AND1407]
gi|401194499|gb|EJR01476.1| hypothetical protein II7_05858, partial [Bacillus cereus MSX-A12]
Length = 810
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IKDVSGLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 438
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 188 GNVVLDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSGLE 242
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILS 148
MK LE+L L +E + + +NLR L LS T +G LA L ++E LS
Sbjct: 243 YMKNLENLTLEEV-----KLENIKFI-SNLRQLKSLSITYGELEDIGPLA-ELEHIESLS 295
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +I D +S +S M +K +D+++ IK D+ TA L L
Sbjct: 296 LRNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLT 339
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 340 VANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 393
>gi|340052077|emb|CBY84390.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698607|gb|ACN18978.1| internalin A [Listeria monocytogenes]
gi|223698703|gb|ACN19042.1| internalin A [Listeria monocytogenes]
gi|223698760|gb|ACN19080.1| internalin A [Listeria monocytogenes]
gi|223698907|gb|ACN19178.1| internalin A [Listeria monocytogenes]
gi|223698910|gb|ACN19180.1| internalin A [Listeria monocytogenes]
gi|223698916|gb|ACN19184.1| internalin A [Listeria monocytogenes]
gi|223698919|gb|ACN19186.1| internalin A [Listeria monocytogenes]
gi|223698964|gb|ACN19216.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|194749663|ref|XP_001957258.1| GF24145 [Drosophila ananassae]
gi|190624540|gb|EDV40064.1| GF24145 [Drosophila ananassae]
Length = 896
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 45/295 (15%)
Query: 3 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFIN-E 60
P S ++AW K+P + L+ LSNC+I+ + E +N + L ++ ++ + +
Sbjct: 235 PTKSSQSIAWANFPKMPRLMELD---LSNCSIEYVSKEAFQNISNLRRLFMSDNKIMTIK 291
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE-----------------------HL 97
++ F +I+ L +LD+S +++ + + Q+ LE +L
Sbjct: 292 QDMFYHIQG--LQYLDMSFTNILTYSYQLQLPTLEMAMSLVYGLKIQQNVFKMLPELIYL 349
Query: 98 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 157
DLS S + +S A +G L+ L+L T I LE L LSG Y
Sbjct: 350 DLSHSKMTRNSAVAFAHLGDKLKFLSLCYTNMPMLSSEIFKN--TALEGLDLSGNPFVSY 407
Query: 158 AI---SYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTAL--QNLNHL 204
I ++ + +LK++ N+++K +Q +G + + +LT + Q+L L
Sbjct: 408 NIIDNAFDGIADTLKYLYFENSNLKDLGWSKKLKNLQVLGLAGNNINALTPMMFQSLEAL 467
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
E L+L V + L L+LR+ ++ ++ L +L LS+ D
Sbjct: 468 EILDLSSNHVGNWYRSAFHNNTALRVLNLRSNTINILTNEMLKDFERLDYLSLGD 522
>gi|130774819|gb|ABO32422.1| InlA [Listeria monocytogenes]
gi|167861894|gb|ACA05646.1| InlA [Listeria monocytogenes]
gi|167861946|gb|ACA05672.1| InlA [Listeria monocytogenes]
gi|167861948|gb|ACA05673.1| InlA [Listeria monocytogenes]
gi|194239402|emb|CAQ76841.1| internalin A [Listeria monocytogenes]
gi|298360052|gb|ADI77605.1| internalin A [Listeria monocytogenes]
gi|298360164|gb|ADI77661.1| internalin A [Listeria monocytogenes]
gi|298360372|gb|ADI77765.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLE 210
I ++ + +L +D++N I G T+L L + N L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLE 210
I ++ + +L +D++N I G T+L L + N L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|206974216|ref|ZP_03235133.1| putative internalin [Bacillus cereus H3081.97]
gi|206747456|gb|EDZ58846.1| putative internalin [Bacillus cereus H3081.97]
Length = 937
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IKDVSGLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 438
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 188 GNVVLDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSGLE 242
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILS 148
MK LE+L L + ++++ ++ NLR L LS T +G LA L ++E LS
Sbjct: 243 YMKNLENLTLEEVKL--ENIKFIS----NLRQLKSLSITYGELEDIGPLA-ELEHIESLS 295
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +I D +S +S M +K +D+++ IK D+ TA L L
Sbjct: 296 LRNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLT 339
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 340 VANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 393
>gi|38154342|gb|AAR12158.1| internalin A [Listeria monocytogenes]
Length = 728
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 46 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 98
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 99 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 158
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 159 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 209
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 210 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 269
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|83629817|gb|ABC26570.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 26/247 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I I + +N L ++ L+ T I++ A + + L
Sbjct: 100 ITPLANLTNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGLTS--LQQ 155
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
L+ S++ ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 156 LNFSSNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 212
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T+L
Sbjct: 213 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 266
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 267 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 322
Query: 246 LSSLSKL 252
+SSL+KL
Sbjct: 323 VSSLTKL 329
>gi|290973212|ref|XP_002669343.1| predicted protein [Naegleria gruberi]
gi|284082889|gb|EFC36599.1| predicted protein [Naegleria gruberi]
Length = 440
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 22/223 (9%)
Query: 48 AKISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 106
++I + G +I+E + TSL +S +VSN +L++MK L L++ + IGD
Sbjct: 201 SRIGIEGVKYISEMKQL----TSLNISKNEVSNEGAK---YLSEMKQLRLLNIYHNEIGD 253
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+ V+ ++ + L +L++ R GV +++ + L L +S +I D Y+S M
Sbjct: 254 EGVKYLSEM-KQLTSLHIGYNRIGLEGVKLIS-EMEQLTSLDISENEISDEGAKYLSEME 311
Query: 167 SLKF--IDISNTDIKG--FIQQVGAETDLVLSLTAL--------QNLNHLERLNLEQTQV 214
L ID S ++G +I ++ T L ++ + + L L++ ++
Sbjct: 312 QLTSLNIDYSRIGLEGVKYISEMKQLTSLTIAYNRIGIKGAKLISEMKQLRLLDISNNEI 371
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
SD LS K+LI L + + + +S + +L L I
Sbjct: 372 SDEGAKYLSEMKQLISLYISEIGIGIKGVKYISEMKQLRLLDI 414
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++++MK L L++ + +GD+ + ++ + L +LN+ R G L+ + L
Sbjct: 138 YISEMKQLTSLNIGYNRVGDEGAKYLSEM-KQLTSLNIGYNRVGIEGAKYLS-EMEQLTS 195
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++ ++I + Y+S M L ++IS + + GA+ L + L
Sbjct: 196 LNIGYSRIGIEGVKYISEMKQLTSLNISKNE----VSNEGAK--------YLSEMKQLRL 243
Query: 207 LNLEQTQVSDATLFPLSTFKEL--IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
LN+ ++ D + LS K+L +H+ L V L +S + +LT+L I + +++
Sbjct: 244 LNIYHNEIGDEGVKYLSEMKQLTSLHIGYNRIGLEGVKL--ISEMEQLTSLDISENEISD 301
Query: 265 SG 266
G
Sbjct: 302 EG 303
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ MK L L++ + IGD+ ++ ++ + L +LN+ R G L+ + L
Sbjct: 114 LISAMKQLTSLNIYDNGIGDEEIKYISEM-KQLTSLNIGYNRVGDEGAKYLS-EMKQLTS 171
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++ ++ Y+S M L ++I + ++G E + + + L
Sbjct: 172 LNIGYNRVGIEGAKYLSEMEQLTSLNIGYS-------RIGIE-----GVKYISEMKQLTS 219
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
LN+ + +VS+ LS K+L L++ + + D + LS + +LT+L I
Sbjct: 220 LNISKNEVSNEGAKYLSEMKQLRLLNIYHNEIGDEGVKYLSEMKQLTSLHI 270
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 45/246 (18%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+L++M+ L L++ S IG + V+ ++ + L +LN+S S+ G L+ + L +
Sbjct: 186 YLSEMEQLTSLNIGYSRIGIEGVKYISEM-KQLTSLNISKNEVSNEGAKYLS-EMKQLRL 243
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN------ 200
L++ +I D + Y+S M L + I I ++ +E + + SL +N
Sbjct: 244 LNIYHNEIGDEGVKYLSEMKQLTSLHIGYNRIGLEGVKLISEMEQLTSLDISENEISDEG 303
Query: 201 ------LNHLERLNLEQTQVSDATLFPLSTFKELIHLS---------------------- 232
+ L LN++ +++ + +S K+L L+
Sbjct: 304 AKYLSEMEQLTSLNIDYSRIGLEGVKYISEMKQLTSLTIAYNRIGIKGAKLISEMKQLRL 363
Query: 233 --LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL-------HG 283
+ N ++D LS + +L +L I + + G+ + L+LLD+ G
Sbjct: 364 LDISNNEISDEGAKYLSEMKQLISLYISEIGIGIKGVKYISEMKQLRLLDITRNRIGKEG 423
Query: 284 GWLLTE 289
LL+E
Sbjct: 424 AKLLSE 429
>gi|194326157|emb|CAQ77237.1| internalin A [Listeria monocytogenes]
gi|290350820|dbj|BAI78331.1| internalin A [Listeria monocytogenes]
gi|290350836|dbj|BAI78339.1| internalin A [Listeria monocytogenes]
gi|298360124|gb|ADI77641.1| internalin A [Listeria monocytogenes]
gi|298360394|gb|ADI77776.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|386052707|ref|YP_005970265.1| internalin A [Listeria monocytogenes Finland 1998]
gi|130774801|gb|ABO32414.1| InlA [Listeria monocytogenes]
gi|130774805|gb|ABO32415.1| InlA [Listeria monocytogenes]
gi|130774807|gb|ABO32416.1| InlA [Listeria monocytogenes]
gi|150371724|dbj|BAF65677.1| internalin A [Listeria monocytogenes]
gi|150371780|dbj|BAF65679.1| internalin A [Listeria monocytogenes]
gi|150371784|dbj|BAF65681.1| internalin A [Listeria monocytogenes]
gi|150371788|dbj|BAF65683.1| internalin A [Listeria monocytogenes]
gi|150371790|dbj|BAF65684.1| internalin A [Listeria monocytogenes]
gi|150371792|dbj|BAF65685.1| internalin A [Listeria monocytogenes]
gi|150371798|dbj|BAF65688.1| internalin A [Listeria monocytogenes]
gi|150371802|dbj|BAF65690.1| internalin A [Listeria monocytogenes]
gi|150371808|dbj|BAF65693.1| internalin A [Listeria monocytogenes]
gi|150371814|dbj|BAF65696.1| internalin A [Listeria monocytogenes]
gi|150371818|dbj|BAF65698.1| internalin A [Listeria monocytogenes]
gi|150371824|dbj|BAF65701.1| internalin A [Listeria monocytogenes]
gi|150371830|dbj|BAF65704.1| internalin A [Listeria monocytogenes]
gi|150371832|dbj|BAF65705.1| internalin A [Listeria monocytogenes]
gi|150371834|dbj|BAF65706.1| internalin A [Listeria monocytogenes]
gi|150371836|dbj|BAF65707.1| internalin A [Listeria monocytogenes]
gi|150371838|dbj|BAF65708.1| internalin A [Listeria monocytogenes]
gi|150371844|dbj|BAF65711.1| internalin A [Listeria monocytogenes]
gi|150371848|dbj|BAF65713.1| internalin A [Listeria monocytogenes]
gi|150371850|dbj|BAF65714.1| internalin A [Listeria monocytogenes]
gi|150371854|dbj|BAF65716.1| internalin A [Listeria monocytogenes]
gi|150371864|dbj|BAF65721.1| internalin A [Listeria monocytogenes]
gi|150371870|dbj|BAF65724.1| internalin A [Listeria monocytogenes]
gi|290350828|dbj|BAI78335.1| internalin A [Listeria monocytogenes]
gi|290350832|dbj|BAI78337.1| internalin A [Listeria monocytogenes]
gi|290350834|dbj|BAI78338.1| internalin A [Listeria monocytogenes]
gi|290350840|dbj|BAI78341.1| internalin A [Listeria monocytogenes]
gi|298359802|gb|ADI77480.1| internalin A [Listeria monocytogenes]
gi|298359828|gb|ADI77493.1| internalin A [Listeria monocytogenes]
gi|298359876|gb|ADI77517.1| internalin A [Listeria monocytogenes]
gi|298359878|gb|ADI77518.1| internalin A [Listeria monocytogenes]
gi|298359918|gb|ADI77538.1| internalin A [Listeria monocytogenes]
gi|298359964|gb|ADI77561.1| internalin A [Listeria monocytogenes]
gi|298359966|gb|ADI77562.1| internalin A [Listeria monocytogenes]
gi|298360014|gb|ADI77586.1| internalin A [Listeria monocytogenes]
gi|298360038|gb|ADI77598.1| internalin A [Listeria monocytogenes]
gi|298360084|gb|ADI77621.1| internalin A [Listeria monocytogenes]
gi|298360104|gb|ADI77631.1| internalin A [Listeria monocytogenes]
gi|298360134|gb|ADI77646.1| internalin A [Listeria monocytogenes]
gi|298360170|gb|ADI77664.1| internalin A [Listeria monocytogenes]
gi|298360178|gb|ADI77668.1| internalin A [Listeria monocytogenes]
gi|298360214|gb|ADI77686.1| internalin A [Listeria monocytogenes]
gi|298360242|gb|ADI77700.1| internalin A [Listeria monocytogenes]
gi|298360244|gb|ADI77701.1| internalin A [Listeria monocytogenes]
gi|298360254|gb|ADI77706.1| internalin A [Listeria monocytogenes]
gi|298360278|gb|ADI77718.1| internalin A [Listeria monocytogenes]
gi|298360310|gb|ADI77734.1| internalin A [Listeria monocytogenes]
gi|298360334|gb|ADI77746.1| internalin A [Listeria monocytogenes]
gi|298360338|gb|ADI77748.1| internalin A [Listeria monocytogenes]
gi|298360376|gb|ADI77767.1| internalin A [Listeria monocytogenes]
gi|298360384|gb|ADI77771.1| internalin A [Listeria monocytogenes]
gi|298360436|gb|ADI77797.1| internalin A [Listeria monocytogenes]
gi|298360532|gb|ADI77845.1| internalin A [Listeria monocytogenes]
gi|298360542|gb|ADI77850.1| internalin A [Listeria monocytogenes]
gi|298360552|gb|ADI77855.1| internalin A [Listeria monocytogenes]
gi|298360564|gb|ADI77861.1| internalin A [Listeria monocytogenes]
gi|298360568|gb|ADI77863.1| internalin A [Listeria monocytogenes]
gi|298360596|gb|ADI77877.1| internalin A [Listeria monocytogenes]
gi|298360666|gb|ADI77912.1| internalin A [Listeria monocytogenes]
gi|298360710|gb|ADI77934.1| internalin A [Listeria monocytogenes]
gi|346645358|gb|AEO37983.1| internalin A [Listeria monocytogenes Finland 1998]
gi|443428778|gb|AGC92188.1| internalin A [Listeria monocytogenes]
gi|443428804|gb|AGC92201.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485070|gb|ADR53006.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLE 210
I ++ + +L +D++N I G T+L L + N L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|404412528|ref|YP_006698115.1| internalin A [Listeria monocytogenes SLCC7179]
gi|298360000|gb|ADI77579.1| internalin A [Listeria monocytogenes]
gi|298360676|gb|ADI77917.1| internalin A [Listeria monocytogenes]
gi|404238227|emb|CBY59628.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC7179]
gi|443428842|gb|AGC92220.1| internalin A [Listeria monocytogenes]
gi|443428848|gb|AGC92223.1| internalin A [Listeria monocytogenes]
gi|443428858|gb|AGC92228.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|130774793|gb|ABO32411.1| InlA [Listeria monocytogenes]
gi|194239384|emb|CAQ76832.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLE 210
I ++ + +L +D++N I G T+L L + N L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|294358401|gb|ADE73853.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLE 210
I ++ + +L +D++N I G T+L L + N L L L L
Sbjct: 266 IGTLAGLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219122964|ref|XP_002181805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407081|gb|EEC47019.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 486
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 11 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL----Y 66
A + +L IS C +S+ I ++ + L + LA +E +L
Sbjct: 198 ALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLARCPITDEGVQYLGKIRN 257
Query: 67 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA--CVGANLRNLNL 124
++T L + V + L++ L + LE L+L S IGD +++ A V NL +L+L
Sbjct: 258 VKTLELCYSAVKDIHLTK---LVNLPMLEELNLDSCPIGDLAIQHFANHNVLPNLVSLDL 314
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+++ S G+ +A L+ LSL I + + ++S++ L+ +++ + DI
Sbjct: 315 ADSDISDLGMVQIA-KFTKLKRLSLFYCSISNRGLRHLSILTELRVLNLDSRDISDD--- 370
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
L LQ+L L+ L++ +V+D LS K L L L + D
Sbjct: 371 ---------GLRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGGVRDAGCA 421
Query: 245 QLSSLSKLTNLSI-RDAVLTNSG 266
L+ L LT+L++ ++ +TN G
Sbjct: 422 SLAKLENLTSLNLSQNERITNRG 444
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 29/285 (10%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + L L+L+NC D + + L +SL G I + + +L
Sbjct: 120 GLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQALSLDGCRCITD-----FSLAAL 174
Query: 72 LSFLDVSNSSLSRFCFLTQ--MKALEHLDLSSSM-------IGDDSVEMVAC---VGANL 119
++ LS+ +T +KALEHL + + D ++ + +NL
Sbjct: 175 ADMYNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNL 234
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
+ L L+ + GV L G + N++ L L + + D ++ + +P L+ +++ + I
Sbjct: 235 QILRLARCPITDEGVQYL-GKIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIG 293
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
Q A +++ +L +L +L + +SD + ++ F +L LSL S++
Sbjct: 294 DLAIQHFANHNVLPNLVSL---------DLADSDISDLGMVQIAKFTKLKRLSLFYCSIS 344
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
+ L LS L++L L++ +++ GL + + LK LD+ G
Sbjct: 345 NRGLRHLSILTELRVLNLDSRDISDDGLRHLQHLKQLKSLDIFSG 389
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|83629819|gb|ABC26571.1| internalin C2 [Listeria monocytogenes]
gi|83629821|gb|ABC26572.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ +TD+S L+++S L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQITDIS--PLANISNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|313485072|gb|ADR53007.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|22347554|gb|AAM95922.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 46 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 98
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 99 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 158
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 159 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 209
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 210 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 269
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|423357027|ref|ZP_17334628.1| hypothetical protein IAU_05077, partial [Bacillus cereus IS075]
gi|401076070|gb|EJP84429.1| hypothetical protein IAU_05077, partial [Bacillus cereus IS075]
Length = 865
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IKDVSGLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 438
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 188 GNVVLDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSGLE 242
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILS 148
MK LE+L L +E + + +NLR L LS T +G LA L ++E LS
Sbjct: 243 YMKNLENLTLEEV-----KLENIKFI-SNLRQLKSLSITYGELEDIGPLA-ELEHIESLS 295
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +I D +S +S M +K +D+++ IK D+ TA L L
Sbjct: 296 LRNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLT 339
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 340 VANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 393
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L ++++L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L ++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNDISDIS--PVSSLTKLQRL 366
>gi|254828722|ref|ZP_05233409.1| internalin C2 [Listeria monocytogenes FSL N3-165]
gi|258601127|gb|EEW14452.1| internalin C2 [Listeria monocytogenes FSL N3-165]
Length = 548
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 103 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 158 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ +TD+S L+++S L
Sbjct: 201 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQITDIS--PLANISNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|130774795|gb|ABO32412.1| InlA [Listeria monocytogenes]
gi|150371796|dbj|BAF65687.1| internalin A [Listeria monocytogenes]
gi|150371806|dbj|BAF65692.1| internalin A [Listeria monocytogenes]
gi|150371822|dbj|BAF65700.1| internalin A [Listeria monocytogenes]
gi|194326149|emb|CAQ77233.1| internalin A [Listeria monocytogenes]
gi|298359930|gb|ADI77544.1| internalin A [Listeria monocytogenes]
gi|298360322|gb|ADI77740.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|423577603|ref|ZP_17553722.1| hypothetical protein II9_04824, partial [Bacillus cereus MSX-D12]
gi|401204307|gb|EJR11124.1| hypothetical protein II9_04824, partial [Bacillus cereus MSX-D12]
Length = 815
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++SSLE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IKDVSSLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLALNEIRDV 438
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 31/235 (13%)
Query: 31 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 90
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 189 NVILDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSSLEY 243
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILSL 149
MK LE+L L +E + + +NLR L LS T +G LA L ++E LSL
Sbjct: 244 MKNLENLTLEEV-----KLENIKFI-SNLRQLKSLSITYGELEDIGPLA-ELEHIESLSL 296
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 209
+I D +S +S M +K +D+++ IK D+ TA L L +
Sbjct: 297 RNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLTV 340
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 341 ANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 393
>gi|223698868|gb|ACN19152.1| internalin A [Listeria monocytogenes]
gi|223698898|gb|ACN19172.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|290974952|ref|XP_002670208.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083764|gb|EFC37464.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 252
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++MK L L++S++ IGD ++ + L +LN+ + +F + G ++ + L +L
Sbjct: 22 ISEMKQLTSLNISNNEIGDKGANFISGM-KQLTSLNIGSNKFGNEGAKSIS-EMKQLTVL 79
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKGF--IQQVGAETDLVLSLTAL----- 198
+ QI D + ++S M L +DI + +KG I ++ T L + L +
Sbjct: 80 YIGLNQIGDEGVKFISEMKRLTSVDICYNGIGVKGANSISEMKQLTSLDICLNQIGDEGA 139
Query: 199 QNLNHLERLNL---EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
++++ LE+L L Q+ D +S K+L L++ + +S L +LT+L
Sbjct: 140 KSISELEQLTLLYISANQIGDEGAKSISELKQLTSLAISANQIGVKGAESISELKQLTSL 199
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
+ + G+ + L LD+ + E L
Sbjct: 200 AASANQIGAEGVKFISEMKQLTSLDIGNNRIGAEGVTL 237
>gi|224124490|ref|XP_002330036.1| predicted protein [Populus trichocarpa]
gi|222871461|gb|EEF08592.1| predicted protein [Populus trichocarpa]
Length = 981
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA----GVGILAGHLPNLEI 146
++ L+ L L+ + D + ++ + L++L LSN RF+ G +LA L NLE
Sbjct: 92 LRNLKELYLNDNKFNDSILTSLSGF-STLKSLYLSNNRFTVTIDLKGFQVLASGLRNLEQ 150
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L LS +++D +S +S +LKF+D+SN G T L L LE
Sbjct: 151 LDLSYNKLNDSVLSSLSGFSTLKFLDLSNNRFTG--------------STGLNGLRKLET 196
Query: 207 LNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L L+ T ++ L L L L R + T H +L NL L+ +
Sbjct: 197 LYLDSTDFKESILIESLGALPSLKTLHARYSRFT----HFGKGWCELKNL--EHLFLSGN 250
Query: 266 GLGSFKPP-----RSLKLLDL 281
L PP SL++LDL
Sbjct: 251 NLKGVLPPCFGNLSSLQILDL 271
>gi|223698835|gb|ACN19130.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|242057137|ref|XP_002457714.1| hypothetical protein SORBIDRAFT_03g012040 [Sorghum bicolor]
gi|241929689|gb|EES02834.1| hypothetical protein SORBIDRAFT_03g012040 [Sorghum bicolor]
Length = 918
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 26/283 (9%)
Query: 8 LNLAWTGV-TKLPNISSLECLNLSNCTID---SILEGNENKAPLAKISLAGTTFINEREA 63
LN ++ V + L +SS+E + + N I S L G + L+ + L+G E A
Sbjct: 74 LNADFSAVASTLLQLSSVESVTVRNANISGMFSALRGVDCGEKLSFLDLSGNHISGEVPA 133
Query: 64 FLYIETSLLSFLDVSNSSLS---RFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANL 119
F I S L +LD+S + +S L+ +L L+LS + ++G ++ +L
Sbjct: 134 F--INCSRLEYLDLSGNLISGSVAVGVLSGCSSLTSLNLSGNHLVGAFPADISHL--ESL 189
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
LNLSN FS G HLP L L+LS D ++M+P L+ +D+S+ +
Sbjct: 190 TTLNLSNNNFSGEIPGNAFLHLPKLRTLNLSFNYFDGSIPEVVTMLPELEILDLSSNLLS 249
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
G I +L + + L+ L L+ ++ +S+ L+ L L SL
Sbjct: 250 GIIPG---------TLCSTNTSSKLQVLYLQNNYLTGGISEAISSCTGLVSLDL---SLN 297
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
++ SSL L L RD VL + L P ++L L
Sbjct: 298 YINGTIPSSLGMLPGL--RDLVLWQNALDGEIPASLSRMLSLE 338
>gi|423393066|ref|ZP_17370292.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1X1-3]
gi|401632746|gb|EJS50531.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1X1-3]
Length = 938
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + L+ + + L ++ T+ + E + L
Sbjct: 235 IKDVSGLEYMTNLENLTLEEVKLDNMQFISKLRQLKSVNITYSELQNIEPLAELENIENL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D + + V + LR L L+N + S+A
Sbjct: 295 SLRNNKISDVSPLSQMKKIKILDLNSNDIKD--ITPLFTVTS-LRTLTLANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S ++K + +L
Sbjct: 350 -LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLSKNELKNI--------EPLL 398
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
L+ +Q+LN LE+ +SD T PLS L L L + + DV
Sbjct: 399 RLSTVQSLN------LEENYISDIT--PLSQLTGLYDLKLGSNEIRDV 438
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+E L +++ L ++ + + L M LE+L L + D+++ ++ LR
Sbjct: 216 KEDLLKVKS--LIVVEAKSKGIKDVSGLEYMTNLENLTLEEVKL--DNMQFISK----LR 267
Query: 121 NLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
L N +S + LA L N+E LSL +I D +S +S M +K +D+++ DIK
Sbjct: 268 QLKSVNITYSELQNIEPLA-ELENIENLSLRNNKISD--VSPLSQMKKIKILDLNSNDIK 324
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
+T L + L L L Q+S+A L + K + +LSL N LT
Sbjct: 325 --------------DITPLFTVTSLRTLTLANNQISNANLAGIEQLKNVKNLSLSNNGLT 370
Query: 240 DVSLHQLSSLSKLTNLSIRDAVLTN 264
++ ++S+ KL L + L N
Sbjct: 371 NI--EHITSMKKLVELDLSKNELKN 393
>gi|217958141|ref|YP_002336685.1| internalin protein [Bacillus cereus AH187]
gi|217063091|gb|ACJ77341.1| internalin protein [Bacillus cereus AH187]
Length = 993
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IKDVSGLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 438
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 188 GNVVLDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSGLE 242
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILS 148
MK LE+L L + ++++ ++ NLR L LS T +G LA L ++E LS
Sbjct: 243 YMKNLENLTLEEVKL--ENIKFIS----NLRQLKSLSITYGELEDIGPLA-ELEHIESLS 295
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +I D +S +S M +K +D+++ IK D+ TA L L
Sbjct: 296 LRNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLT 339
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 340 VANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 393
>gi|223698658|gb|ACN19012.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|223698655|gb|ACN19010.1| internalin A [Listeria monocytogenes]
gi|223698913|gb|ACN19182.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|290892594|ref|ZP_06555587.1| InlC2 [Listeria monocytogenes FSL J2-071]
gi|404406716|ref|YP_006689431.1| internalin C2 [Listeria monocytogenes SLCC2376]
gi|290557903|gb|EFD91424.1| InlC2 [Listeria monocytogenes FSL J2-071]
gi|404240865|emb|CBY62265.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 548
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 103 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 158 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ ++DVS L++LS L
Sbjct: 201 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQISDVS--PLANLSNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|85679262|gb|ABC72047.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|222094304|ref|YP_002528363.1| internalin protein [Bacillus cereus Q1]
gi|221238361|gb|ACM11071.1| possible internalin protein [Bacillus cereus Q1]
Length = 1010
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 224 IKDVSGLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 283
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 284 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 338
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 339 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 381
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 382 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 427
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 177 GNVVLDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSGLE 231
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILS 148
MK LE+L L + ++++ ++ NLR L LS T +G LA L ++E LS
Sbjct: 232 YMKNLENLTLEEVKL--ENIKFIS----NLRQLKSLSITYGELEDIGPLA-ELEHIESLS 284
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +I D +S +S M +K +D+++ IK D+ TA L L
Sbjct: 285 LRNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLT 328
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 329 VANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 382
>gi|290977067|ref|XP_002671260.1| predicted protein [Naegleria gruberi]
gi|284084827|gb|EFC38516.1| predicted protein [Naegleria gruberi]
Length = 378
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 21/247 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++++ L+ LD++++ IGD + ++ + L L + +S G + G L L L
Sbjct: 79 VSELNQLKELDITANDIGDIGAKYISQM-KELTKLYVRYNDINSQGASSI-GELHQLTKL 136
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLS--------L 195
++S I D + +S M L + + N I FI Q+ T+L +S +
Sbjct: 137 NISYNNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIGIEGV 196
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ L+ L RL + Q+ +S +L LS+ + + D L L L LT L
Sbjct: 197 ETISQLSQLTRLKISSNQIGARGAILISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKL 256
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSD 315
+ N G+ S + L LD+ G + + A QF ++ + +
Sbjct: 257 KADFNQIGNEGVKSIIQLKQLTFLDIGGNNISHKGA--QFINQLKQLRTLY-----ISEN 309
Query: 316 QIGSNGP 322
QIG+ G
Sbjct: 310 QIGNKGA 316
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F++QMK L +L +S + IG + VE ++ + + L L +S+ + + G IL L L
Sbjct: 174 FISQMKQLTNLSISENHIGIEGVETISQL-SQLTRLKISSNQIGARGA-ILISKLDKLTK 231
Query: 147 LSLSGTQIDDYA------------------------ISYMSMMPSLKFIDISNTDI--KG 180
LS+ +I+D + + + L F+DI +I KG
Sbjct: 232 LSIGSNRINDEGLKSLCRLKHLTKLKADFNQIGNEGVKSIIQLKQLTFLDIGGNNISHKG 291
Query: 181 --FIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIH 230
FI Q+ L +S + N L L L++ + ++SD + + K+L
Sbjct: 292 AQFINQLKQLRTLYISENQIGNKGAKLISELTQLRILHIRKNELSDEGVKSILLMKQLTE 351
Query: 231 LSLR-NASLTDVSLHQLSSLSKL 252
L LR N +T +QLS+L L
Sbjct: 352 LDLRENYDITVRMENQLSTLKSL 374
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG----HLPN 143
+ ++K L+ ++ + IG + ++ ++ L S G+GI L
Sbjct: 31 IAELKQLKKINFHRNQIGQNGLQTISQFNQ------LLCLDISCNGIGIEGAKAVSELNQ 84
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 203
L+ L ++ I D Y+S M L + + DI GA +++ L+
Sbjct: 85 LKELDITANDIGDIGAKYISQMKELTKLYVRYNDINS----QGA--------SSIGELHQ 132
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
L +LN+ + D + +S K L LS+ N + S +S + +LTNLSI + +
Sbjct: 133 LTKLNISYNNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIG 192
Query: 264 NSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
G+ + L L + + AIL
Sbjct: 193 IEGVETISQLSQLTRLKISSNQIGARGAIL 222
>gi|22347556|gb|AAM95923.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 46 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 98
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 99 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 158
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 159 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 209
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLE 210
I ++ + +L +D++N I G T+L L + N L L L L
Sbjct: 210 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 269
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|70663921|emb|CAE02935.3| OSJNBa0014K14.7 [Oryza sativa Japonica Group]
Length = 557
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 44/309 (14%)
Query: 14 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L + LE LNL C DS ++ + L ++ L+ + ++L S
Sbjct: 225 GLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLR-GLSK 283
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+ L++ +++ C ++ + +L L+LS + D+ E + + L+ LNL
Sbjct: 284 LAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGL-VKLKVLNLGFNYI 342
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--------SLKFIDISNTDIKGF 181
+ A + L L NLE L+L +I D ++++ + ++ + S T G
Sbjct: 343 TDACLVHLK-ELINLECLNLDSCKIGDEGLAHLKVFHKTLKAENHTISLMQTSETKKLGT 401
Query: 182 IQQVGAE----TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL---- 233
+ E + L + + Q L L L+L +++DA L FK L L +
Sbjct: 402 FRHRSWEQWTSSSLWMVFLSSQGLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGL 461
Query: 234 ---------------------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
+N +LTD SL +S L+ L +L++ ++ ++NSGL KP
Sbjct: 462 ITDAGVKNIKDLKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLKP 521
Query: 273 PRSLKLLDL 281
++L+ L L
Sbjct: 522 LQNLRSLSL 530
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+L + L HL+L + +E+++ + A+L LNLS G L G L L++
Sbjct: 277 YLRGLSKLAHLNLEGCAVTAACLEVISGL-ASLVLLNLSRCGVYDEGCEHLEG-LVKLKV 334
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--------KGFIQQVGAETDLV--LSLT 196
L+L I D + ++ + +L+ +++ + I K F + + AE + + +
Sbjct: 335 LNLGFNYITDACLVHLKELINLECLNLDSCKIGDEGLAHLKVFHKTLKAENHTISLMQTS 394
Query: 197 ALQNLNHLERLNLEQTQVSDATLFPLST--FKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+ L + EQ S + LS+ L HL L A +TD + L L +
Sbjct: 395 ETKKLGTFRHRSWEQWTSSSLWMVFLSSQGLTGLTHLDLFGARITDAGTNCLKYFKNLQS 454
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
L + ++T++G+ + K ++L LL+L LT+ ++
Sbjct: 455 LEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSL 492
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 4 RLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
+L LNL + +T L + +LECLNL +C I G+E LA + + T
Sbjct: 331 KLKVLNLGFNYITDACLVHLKELINLECLNLDSCKI-----GDEG---LAHLKVFHKTLK 382
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
E ++TS L F + ++ E SS + S + +
Sbjct: 383 AENHTISLMQTS-------ETKKLGTF----RHRSWEQWTSSSLWMVFLSSQGLT----G 427
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L +L+L R + AG L + NL+ L + G I D + + + +L +++S
Sbjct: 428 LTHLDLFGARITDAGTNCLK-YFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLS---- 482
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
Q G TD L L + L L LN+ ++VS++ L L + L LSL + +
Sbjct: 483 -----QNGNLTDKSLEL--ISRLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCKV 535
Query: 239 TDVSLHQLSSLSKLTNL-SIR 258
T + + +L L+ L NL S+R
Sbjct: 536 TAIEIKKL-QLAALPNLVSVR 555
>gi|350552647|ref|ZP_08921844.1| protein of unknown function DUF1566 [Thiorhodospira sibirica ATCC
700588]
gi|349793578|gb|EGZ47410.1| protein of unknown function DUF1566 [Thiorhodospira sibirica ATCC
700588]
Length = 437
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ--IDDYAISYM-SMMPSLKFIDIS 174
NLR L+LSNTR S+ G+ + L LE+L+LS ++D +++ + + +P L +++S
Sbjct: 87 NLRKLDLSNTRLSAQGLVAILSELHELEVLNLSNNPLFVEDASLAELWAHLPRLSELNLS 146
Query: 175 NTDIKGFIQQVGAETDLVL---------SLTALQN-----LNHLERLNLEQTQVSDATLF 220
T ++ +GA T L L L AL + LN L LNL T ++ +
Sbjct: 147 QTGLQP--AHLGALTALNLVRLNLADNPDLGALDDLGIGQLNRLRELNLSNTGLASISPQ 204
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L LI L L + +L D+ ++L +L L R L PR ++LL
Sbjct: 205 HLPA-ASLIRLDLSHNTLKDIPFMDFAALEQLNILGNRRVTLAERYASILSVPRLMQLL 262
>gi|324096390|gb|ADY17724.1| RT11110p [Drosophila melanogaster]
Length = 517
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
N +E E + L FL +SN++L F C L + LE L L S+ + + + +
Sbjct: 163 NYQENITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYAL- 221
Query: 117 ANLRNLNLSNTR-FSSAGVGILA-GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKFI 171
NLR LN+SN F +A G + LE+L S + DD + + +L
Sbjct: 222 PNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLW 281
Query: 172 --DISNTDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL--F 220
I+ + F+ + +L NL LE+L+L + + L F
Sbjct: 282 LNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVF 341
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
++LI+L L N + D+ LSS+ + L +R L + L F P R L+LL
Sbjct: 342 GERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLT 401
Query: 281 LH 282
++
Sbjct: 402 IN 403
>gi|223698892|gb|ACN19168.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|24662159|ref|NP_729599.1| CG32055 [Drosophila melanogaster]
gi|23093730|gb|AAF50164.2| CG32055 [Drosophila melanogaster]
Length = 534
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
N +E E + L FL +SN++L F C L + LE L L S+ + + + +
Sbjct: 180 NYQENITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYAL- 238
Query: 117 ANLRNLNLSNTR-FSSAGVGILA-GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKFI 171
NLR LN+SN F +A G + LE+L S + DD + + +L
Sbjct: 239 PNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLW 298
Query: 172 --DISNTDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL--F 220
I+ + F+ + +L NL LE+L+L + + L F
Sbjct: 299 LNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVF 358
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
++LI+L L N + D+ LSS+ + L +R L + L F P R L+LL
Sbjct: 359 GERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLT 418
Query: 281 LH 282
++
Sbjct: 419 IN 420
>gi|281363846|ref|NP_611506.2| Leucine-rich tendon-specific protein [Drosophila melanogaster]
gi|272432586|gb|AAF57433.2| Leucine-rich tendon-specific protein [Drosophila melanogaster]
Length = 808
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 61 REAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-AN 118
+ AFL I L + N+ +S + L+ + ALE LDL+++ I ++ VG +
Sbjct: 193 KSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTS 250
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNT 176
L L LSN + SS +L LE+L L G ++ DYA S S+ SL+ +D+
Sbjct: 251 LVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN 309
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 310 NLNG-----------PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 358
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 359 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 416
>gi|147769371|emb|CAN72496.1| hypothetical protein VITISV_010511 [Vitis vinifera]
Length = 1241
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 20/278 (7%)
Query: 40 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHL 97
GN +K + ++S G + E F S L +D SN+SL+ L+ + L L
Sbjct: 253 GNLSKLNILQLSSNGISGPIPTEIF---NISSLQEIDFSNNSLTGEIPSNLSHCRELRVL 309
Query: 98 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 157
LS + + + + +NL L LS + + G+ G+L NL IL L I
Sbjct: 310 SLSFNQFTGGIPQAIGSL-SNLEGLYLSYNKLT-GGIPREIGNLSNLNILQLGSNGISGP 367
Query: 158 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 217
+ + + SL+ ID SN + G L + ++L +L+ L L Q +S
Sbjct: 368 IPAEIFNISSLQIIDFSNNSLSG-----------SLPMDICKHLPNLQGLYLLQNHLSGQ 416
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 277
LS EL++LSL ++ +LSKL ++S+R L S SF +LK
Sbjct: 417 LPTTLSLCGELLYLSLAVNKFRGSIPREIGNLSKLEDISLRSNSLVGSIPTSFGNLMALK 476
Query: 278 LLDLHGGWL--LTEDAILQFCKMHPRIEVWHELSVICP 313
LDL +L +AI ++ + V + LS P
Sbjct: 477 YLDLGMNFLTGTVPEAIFNISELQILVLVQNHLSGSLP 514
>gi|170576696|ref|XP_001893732.1| Leucine Rich Repeat family protein [Brugia malayi]
gi|158600094|gb|EDP37432.1| Leucine Rich Repeat family protein [Brugia malayi]
Length = 228
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYA-ISYMSMMPSLKFIDIS 174
LR +NL + V +A LE L LS TQ+ D A IS + LK +++S
Sbjct: 14 CELRTVNLLGCFITDDTVADIASSCSQLEYLCLSSCTQVTDRALISLANGCHRLKDLELS 73
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV-SDATLFPLST-FKELIHLS 232
+ TD + A +N + LER++LE + +D TL S L++LS
Sbjct: 74 GCSLL---------TDHGFGILA-KNCHELERMDLEDCSLLTDITLDNFSKGCPCLLNLS 123
Query: 233 LRNASL-TDVSLHQLSSLSKLTNLSIRDAV----------LTNSGLGSFKPPRSLKLLDL 281
L + L TD L QL N ++D + +T+ L K R+L+ +DL
Sbjct: 124 LSHCELITDAGLRQLC-----LNYHLKDRIQVLELDNCPQITDISLDYMKQVRTLQRVDL 178
Query: 282 HGGWLLTEDAILQFCKMHPRIEV 304
+ +T+DAI +F + P +EV
Sbjct: 179 YDCQNITKDAIKRFKNLKPDVEV 201
>gi|20140787|sp|Q9DGB6.1|TLR22_CHICK RecName: Full=Toll-like receptor 2 type-2; Flags: Precursor
gi|10863071|dbj|BAB16842.1| TLR2 type2 [Gallus gallus]
Length = 781
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDI 178
NL +L +S + I M P +LK++++S+T I
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQI 445
>gi|375282625|ref|YP_005103062.1| internalin [Bacillus cereus NC7401]
gi|358351150|dbj|BAL16322.1| internalin, putative [Bacillus cereus NC7401]
Length = 929
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 18 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 171 IKDVSGLEYMKNLENLTLEEVKLENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESL 230
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 231 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 285
Query: 136 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 286 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 328
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 329 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 374
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
N +D L+ + NK L + +L +E L +++ L ++ + + L
Sbjct: 124 GNVVLDKQLQKHINKYNLNRENLDTPIT---KEDLLKVKS--LIVVEAKSKGIKDVSGLE 178
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILS 148
MK LE+L L +E + + +NLR L LS T +G LA L ++E LS
Sbjct: 179 YMKNLENLTLEEV-----KLENIKFI-SNLRQLKSLSITYGELEDIGPLA-ELEHIESLS 231
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
L +I D +S +S M +K +D+++ IK D+ TA L L
Sbjct: 232 LRNNKISD--LSPLSQMKKIKLLDLNSNYIK----------DIKPLFTA----KSLRTLT 275
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ Q+S+A L + K + LSL N LT++ ++ + KL L + L N
Sbjct: 276 VANNQISNANLAGIEQLKNVKSLSLSNNGLTNI--EHITPMKKLVELDLSKNELEN 329
>gi|262399431|gb|ACY65498.1| MIP13715p [Drosophila melanogaster]
Length = 830
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 61 REAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-AN 118
+ AFL I L + N+ +S + L+ + ALE LDL+++ I ++ VG +
Sbjct: 215 KSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTS 272
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNT 176
L L LSN + SS +L LE+L L G ++ DYA S S+ SL+ +D+
Sbjct: 273 LVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN 331
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 332 NLNG-----------PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 380
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 381 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 438
>gi|390350285|ref|XP_001191385.2| PREDICTED: toll-like receptor 3-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 25/231 (10%)
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
F++++ LLS+ +S+ S FC LT L LD+SS+ + E AC+ NL L
Sbjct: 183 GFIWLKMLLLSYNKISSLSNESFCLLTS---LLELDVSSNKLVSLPPETFACL-PNLTTL 238
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTDI--- 178
++SN + G +P + +SLSG +I D I + + +LK +DISN I
Sbjct: 239 DVSNNLLPNISPQSFDG-MPLIRSISLSGNRITDLNIGGRLWTLGTLKALDISNNYIPLI 297
Query: 179 -----KGFI--QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIH 230
KG I Q + + LT+ + + L + +S+ + L TFK+L
Sbjct: 298 PRGKFKGLINLQVLDVSNN---QLTSYSEYAFTDLVLLREQHLSNEKVVLLKDTFKQLRT 354
Query: 231 LSLRNASLTDV-----SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
L + S TD+ S+ Q +++ L +L++ A L ++ L + RSL
Sbjct: 355 LLYLDLSYTDIQVSQSSIEQFYNMTCLKDLNLESATLRDTDLYNGINNRSL 405
>gi|350401942|ref|XP_003486314.1| PREDICTED: c-Maf-inducing protein-like isoform 1 [Bombus impatiens]
gi|350401945|ref|XP_003486315.1| PREDICTED: c-Maf-inducing protein-like isoform 2 [Bombus impatiens]
Length = 1027
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ +LE+L L+ + + E + + A LR+LNL T+F AG+ +++ HL L++L+L
Sbjct: 915 LGSLEYLSLAFTSVTSACAEQLIKLPA-LRHLNLWATQFGDAGLQMISEHLQKLQVLNLC 973
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDI 178
T + D IS ++ + SLK +++++T +
Sbjct: 974 ETPVSDKGISSLASLTSLKKLNLNSTKL 1001
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L ++ +S++ C L ++ AL HL+L ++ GD ++M++ L+ LNL T
Sbjct: 918 LEYLSLAFTSVTSACAEQLIKLPALRHLNLWATQFGDAGLQMISEHLQKLQVLNLCETPV 977
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTD 177
S G+ LA L +L+ L+L+ T++ S +P+L+ D+ TD
Sbjct: 978 SDKGISSLAS-LTSLKKLNLNSTKLSVQTFESLKKCLPALQEFDVRYTD 1025
>gi|340718417|ref|XP_003397664.1| PREDICTED: c-Maf-inducing protein-like isoform 1 [Bombus terrestris]
gi|340718419|ref|XP_003397665.1| PREDICTED: c-Maf-inducing protein-like isoform 2 [Bombus terrestris]
Length = 1028
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ +LE+L L+ + + E + + A LR+LNL T+F AG+ +++ HL L++L+L
Sbjct: 916 LGSLEYLSLAFTSVTSACAEQLIKLPA-LRHLNLWATQFGDAGLQMISEHLQKLQVLNLC 974
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDI 178
T + D IS ++ + SLK +++++T +
Sbjct: 975 ETPVSDKGISSLASLTSLKKLNLNSTKL 1002
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L ++ +S++ C L ++ AL HL+L ++ GD ++M++ L+ LNL T
Sbjct: 919 LEYLSLAFTSVTSACAEQLIKLPALRHLNLWATQFGDAGLQMISEHLQKLQVLNLCETPV 978
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTD 177
S G+ LA L +L+ L+L+ T++ S +P L+ D+ TD
Sbjct: 979 SDKGISSLAS-LTSLKKLNLNSTKLSVQTFESLKKCLPGLQEFDVRYTD 1026
>gi|423415626|ref|ZP_17392746.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG3O-2]
gi|423428582|ref|ZP_17405586.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG4O-1]
gi|401095791|gb|EJQ03846.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG3O-2]
gi|401124328|gb|EJQ32092.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG4O-1]
Length = 932
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
+ FL + N+ +S L+QMK ++ LDL+++ I D ++ + V + L+ L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNNNYIKD--IKPLFTVKS-LKTLTVANNQISN 347
Query: 132 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|124003930|ref|ZP_01688777.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
gi|123990509|gb|EAY29989.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
Length = 383
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 47/246 (19%)
Query: 77 VSNSSLSRFCF-LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
V+N L++ L +K+L+HL LS +++ ++V NLR L ++N +
Sbjct: 77 VTNRQLTQVPQELVWLKSLKHLHLSRNLLKHLPTDIVHL--DNLRGLIINNNQIKELPEE 134
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG--------- 186
I G + NLE L + G ++ + S + + LK +++ ++ +++G
Sbjct: 135 I--GQMKNLEKLDVRGNRLRELPQS-IGQLKQLKVLELKGNQLRSLPEEIGKLSQLESIT 191
Query: 187 ----AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTD 240
A L LSL L LNH E NL + FP L L H+ L+N L
Sbjct: 192 LQSNALQTLPLSLANLHELNHRESFNLSRNHFVS---FPEALLLMPNLQHIDLKNNQLAA 248
Query: 241 V--SLHQ--------------------LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 278
+ ++H + LSKL++L +R+ +LT+ S K SLK
Sbjct: 249 LPSNIHLLEQLQNLELRNNKITRLPDAIGQLSKLSSLDLRNNLLTDLP-NSLKTLVSLKA 307
Query: 279 LDLHGG 284
LD+ G
Sbjct: 308 LDIRGN 313
>gi|195127591|ref|XP_002008252.1| GI11918 [Drosophila mojavensis]
gi|193919861|gb|EDW18728.1| GI11918 [Drosophila mojavensis]
Length = 923
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 35/198 (17%)
Query: 10 LAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFIN-EREAFLYI 67
+AW LPN+ LE +SNC+I+ + + +N L K+ ++ + + + F YI
Sbjct: 270 IAWATFPSLPNLLELE---ISNCSIEYVSRKAFKNVTNLRKLFISNNKIMTIDIDTFYYI 326
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALE-----------------------HLDLSSSMI 104
L +LD+S +++ + +L M LE +LDLS S I
Sbjct: 327 PK--LQYLDLSFTNVLNYNYLFSMPTLEMIFNLVYGLKIHQAAFKYLPDLIYLDLSHSKI 384
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI---SY 161
+S +G L+ L+L T F G+ + LE L LSG Y I ++
Sbjct: 385 TKNSAVAFTYLGDKLKYLSLCYTSFPMMSNGLFKNTI--LEGLDLSGNPFVSYNILDDAF 442
Query: 162 MSMMPSLKFIDISNTDIK 179
S +LKF+ ++++K
Sbjct: 443 DSTSETLKFLFFEHSNLK 460
>gi|436838802|ref|YP_007324018.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrella
aestuarina BUZ 2]
gi|384070215|emb|CCH03425.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrella
aestuarina BUZ 2]
Length = 496
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 261
+ L L L TQ++DAT+ + K L L L ++TD L QL SL+ L L++
Sbjct: 383 DQLVWLKLSDTQITDATMATIGKLKNLQKLHLERTAVTDAGLRQLGSLTYLEYLNLYGTN 442
Query: 262 LTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 304
+T++GL + +SL+ + + W TE I + + P +E+
Sbjct: 443 ITDAGLANLAGLKSLRTVYV---WQTKTTEAGIAKLKQALPNVEI 484
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
++ + L +L++L+LE+T V+DA L L + L +L+L ++TD L L+ L L
Sbjct: 399 TMATIGKLKNLQKLHLERTAVTDAGLRQLGSLTYLEYLNLYGTNITDAGLANLAGLKSLR 458
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
+ + T +G+ K ++L +++ GG
Sbjct: 459 TVYVWQTKTTEAGIAKLK--QALPNVEIIGG 487
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|324506357|gb|ADY42718.1| Leucine-rich repeat-containing protein 15 [Ascaris suum]
Length = 649
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 22/230 (9%)
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
E ++ + L LD+ + +++ L ++K LE L +S + + +G NL
Sbjct: 165 EPMMFNDLDRLEILDLGGNKIAQITTGQLDKLKDLETLIISDNQLSSIEDGAFQALG-NL 223
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
+ LNL+N + ++ G G L NLE L+L I + S M +L+ +DI N I
Sbjct: 224 KTLNLANNKLTNITKGTFKG-LNNLETLNLQSNNIINVDWSAFVHMRNLRTLDIGNNHI- 281
Query: 180 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
+ L L LE+L L + L L LS S+T
Sbjct: 282 --------------TQVELHRLQSLEKLYLNNNSIQSLKNISLRDLINLSVLSFDRNSIT 327
Query: 240 DVS---LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
++ LH L+ +L LS+ + G + +P LK+L L L
Sbjct: 328 QIADGDLHSLAESVRLNLLSVAANKIAKIGPRALEPIHQLKVLSLENNQL 377
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 115 VGANLRNLNLSNTRFSSAGVG-ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
+G L+ L L N G+ ++ L LEIL L G +I + + L+ + I
Sbjct: 147 IGQRLKVLQLRNNILK--GIEPMMFNDLDRLEILDLGGNKIAQITTGQLDKLKDLETLII 204
Query: 174 SNTDI----KGFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFP 221
S+ + G Q +G L L+ L N LN+LE LNL+ + +
Sbjct: 205 SDNQLSSIEDGAFQALGNLKTLNLANNKLTNITKGTFKGLNNLETLNLQSNNIINVDWSA 264
Query: 222 LSTFKELIHLSLRNASLTDVSLHQLSSLSK----------LTNLSIRDAV 261
+ L L + N +T V LH+L SL K L N+S+RD +
Sbjct: 265 FVHMRNLRTLDIGNNHITQVELHRLQSLEKLYLNNNSIQSLKNISLRDLI 314
>gi|320168689|gb|EFW45588.1| tyrosine-protein kinase transforming protein Src [Capsaspora
owczarzaki ATCC 30864]
Length = 1510
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
LT + AL L L S+ I S+ A G A L L+LS+ + +S + AG L L
Sbjct: 782 LTGLTALTWLYLQSNQI--TSISANAFTGLAALNRLDLSSNQIASISANVFAG-LSALTG 838
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
+ LSG Q S ++ +P LK + +SN I + TA L L
Sbjct: 839 VVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITS------------IPATAFAGLTALIG 886
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+NL Q+ + LI L L N +T +S + + LS LT L + + +T+
Sbjct: 887 VNLAGNQLRSIPTSAFTGLTALIQLVLPNNQITSISANAFAGLSALTLLHLYNNQITSIS 946
Query: 267 LGSFKPPRSLKLLDLH 282
+F ++ L L+
Sbjct: 947 ANAFSGLTAMTALALN 962
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN---- 200
LSL+G Q+ D I ++ + +L +D++N I G T+L L + N
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPI 255
Query: 201 --LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTSLELHENQLED--ISPISNLKNLTYLALYFNNISDIS--PVSSLTKLQRL 308
>gi|223698700|gb|ACN19040.1| truncated internalin A [Listeria monocytogenes]
Length = 599
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821282|gb|ACL37766.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L ++++L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISSL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|195585177|ref|XP_002082366.1| GD11532 [Drosophila simulans]
gi|194194375|gb|EDX07951.1| GD11532 [Drosophila simulans]
Length = 537
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 61 REAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-AN 118
+ AFL I L + N+ +S + L+ + ALE LDL+++ I ++ VG +
Sbjct: 181 KSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTS 238
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNT 176
L L LSN + SS +L LE+L L G ++ DYA S S+ SL+ +D+
Sbjct: 239 LVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN 297
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 298 NLNG-----------PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 346
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 347 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 404
>gi|223698622|gb|ACN18988.1| internalin A [Listeria monocytogenes]
gi|223698634|gb|ACN18996.1| internalin A [Listeria monocytogenes]
gi|223698694|gb|ACN19036.1| internalin A [Listeria monocytogenes]
gi|223698712|gb|ACN19048.1| internalin A [Listeria monocytogenes]
gi|223698745|gb|ACN19070.1| internalin A [Listeria monocytogenes]
gi|223698751|gb|ACN19074.1| internalin A [Listeria monocytogenes]
gi|223698766|gb|ACN19084.1| internalin A [Listeria monocytogenes]
gi|223698769|gb|ACN19086.1| internalin A [Listeria monocytogenes]
gi|223698772|gb|ACN19088.1| internalin A [Listeria monocytogenes]
gi|223698775|gb|ACN19090.1| internalin A [Listeria monocytogenes]
gi|223698778|gb|ACN19092.1| internalin A [Listeria monocytogenes]
gi|223698787|gb|ACN19098.1| internalin A [Listeria monocytogenes]
gi|223698793|gb|ACN19102.1| internalin A [Listeria monocytogenes]
gi|223698799|gb|ACN19106.1| internalin A [Listeria monocytogenes]
gi|223698802|gb|ACN19108.1| internalin A [Listeria monocytogenes]
gi|223698805|gb|ACN19110.1| internalin A [Listeria monocytogenes]
gi|223698817|gb|ACN19118.1| internalin A [Listeria monocytogenes]
gi|223698859|gb|ACN19146.1| internalin A [Listeria monocytogenes]
gi|223698865|gb|ACN19150.1| internalin A [Listeria monocytogenes]
gi|223698979|gb|ACN19226.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFIQQVGAE--TDLVLSLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G + G + + + +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|311213931|gb|ADP69283.1| RT10113p [Drosophila melanogaster]
Length = 695
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 61 REAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-AN 118
+ AFL I L + N+ +S + L+ + ALE LDL+++ I ++ VG +
Sbjct: 173 KSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTS 230
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNT 176
L L LSN + SS +L LE+L L G ++ DYA S S+ SL+ +D+
Sbjct: 231 LVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN 289
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 290 NLNG-----------PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 338
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 339 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 396
>gi|290984863|ref|XP_002675146.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284088740|gb|EFC42402.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 458
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 35/288 (12%)
Query: 14 GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
G + +S L C+N+ N I + E L +++ G I ++ A E L
Sbjct: 188 GAKYISQMSQLTCMNIGNNNIGEPGAEYISQMKQLTNLNIHGNR-IGDKGARHISEMEGL 246
Query: 73 SFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA--------CVGANLRNL 122
+ LD+ ++L +L+QMK L +L + + + ++ + V+ C+GAN +
Sbjct: 247 THLDIGYNNLGNLGSQYLSQMKKLTYLFIEGNRLDENGAKFVSELKQLTILCIGAN--GI 304
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
+ R+ + + L LS+ G +I + ++ M L ++I +
Sbjct: 305 GPNGARYIT--------EMKQLTDLSIGGAKIGEEGARHLKTMNQLTNLNIGYNRLG--- 353
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
+GA+ + + L L++ + D +S K L L + ++TD
Sbjct: 354 -SIGAK--------FISEMKQLTSLDIFYNNIEDEGAKHISELKNLRKLDIGRNNITDEG 404
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
+S L++LT+LSI L++ G L LD+ GG +++D
Sbjct: 405 AKYVSQLNQLTHLSITYNNLSDEGAKYINTMTQLTKLDI-GGNAISDD 451
>gi|242059971|ref|XP_002459131.1| hypothetical protein SORBIDRAFT_03g046350 [Sorghum bicolor]
gi|241931106|gb|EES04251.1| hypothetical protein SORBIDRAFT_03g046350 [Sorghum bicolor]
Length = 1059
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 38 LEGNENKAPLAK--------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR----F 85
L GN PL + L+G F L ++ LL L+VS + LS
Sbjct: 158 LTGNAFSGPLPPAFPRTLRFLVLSGNQFSGPVPEGLAAKSPLLLHLNVSGNQLSGSPDFA 217
Query: 86 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
L ++ L LDLS + + +A + NL+ L+LS RFS A V G P+L
Sbjct: 218 GALWPLERLRTLDLSRNQFSGPVTDGIARL-HNLKTLSLSGNRFSGA-VPADIGLCPHLS 275
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNT----DIKGFIQQVGAETDLVLSLTA---- 197
+ LS D + + + SL ++ S D+ ++ ++ A L LS A
Sbjct: 276 TIDLSSNAFDGHLPDSIGQLGSLVYLSASGNRLSGDVPAWLGKLAAVQHLDLSDNAFTGS 335
Query: 198 ----LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 239
L +L L+ L+L + Q+S A +S +L L LR SL+
Sbjct: 336 LPDSLGDLKALKYLSLSRNQLSGAVPASMSGCTKLAELHLRGNSLS 381
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
LR L+LS +FS +A L NL+ LSLSG + + + + P L ID+S+
Sbjct: 226 LRTLDLSRNQFSGPVTDGIA-RLHNLKTLSLSGNRFSGAVPADIGLCPHLSTIDLSSNAF 284
Query: 179 KGFIQQVGAETDLVLSLTA------------LQNLNHLERLNLEQTQVSDATLFPLSTFK 226
G + + ++ L+A L L ++ L+L + + L K
Sbjct: 285 DGHLPDSIGQLGSLVYLSASGNRLSGDVPAWLGKLAAVQHLDLSDNAFTGSLPDSLGDLK 344
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L +LSL L+ +S +KL L +R L+ S
Sbjct: 345 ALKYLSLSRNQLSGAVPASMSGCTKLAELHLRGNSLSGS 383
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|195589250|ref|XP_002084368.1| GD12868 [Drosophila simulans]
gi|194196377|gb|EDX09953.1| GD12868 [Drosophila simulans]
Length = 534
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 22/277 (7%)
Query: 21 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 80
++LE N S I +++E N K + K+ T N +E E + L FL +SN+
Sbjct: 145 FANLEYANFSENLI-AVIEPNAFKH-MKKLRFLDLT-TNYQENITLGENANLRFLSISNN 201
Query: 81 SLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGIL 137
+L F C + LE L L S+ + + + + NLR LN+SN F +
Sbjct: 202 NLRDFQWCHFRGLPKLEELHLHSNWLEHLDMGIFYAL-PNLRVLNVSNNNLFEIKRTLFM 260
Query: 138 A-GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKFI--DISNTDIKGFIQ-------Q 184
A G + L++L S + DD + + +L I+ + F+
Sbjct: 261 APGEVAPLDLLDYSSNNVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLH 320
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL--FPLSTFKELIHLSLRNASLTDVS 242
+ VL NL LE+L+L + + L F ++LI+L L N + D+
Sbjct: 321 LQGNKISVLPDDVFANLTALEKLDLSKNNIKKLGLRVFGERILRKLIYLDLSNNYIADLH 380
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
LSS+ + L +R L + L F P R L+LL
Sbjct: 381 PLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLL 417
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 72 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 124
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 125 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 184
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 185 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 235
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 236 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 296 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 333
>gi|195486778|ref|XP_002091650.1| GE12132 [Drosophila yakuba]
gi|194177751|gb|EDW91362.1| GE12132 [Drosophila yakuba]
Length = 800
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 61 REAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-AN 118
+ AFL I L + N+ +S + L+ + ALE LDL+++ I ++ VG +
Sbjct: 185 KSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTS 242
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNT 176
L L LSN + SS +L LE+L L G ++ DYA S S+ SL+ +D+
Sbjct: 243 LVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN 301
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 302 NLNG-----------PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 350
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 351 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 408
>gi|290978509|ref|XP_002671978.1| predicted protein [Naegleria gruberi]
gi|284085551|gb|EFC39234.1| predicted protein [Naegleria gruberi]
Length = 284
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ L++ ++++ + +K L LD+ + IG++ V+ ++ + L +L + +
Sbjct: 89 LTRLNIRSNNIGLVEPIINLKTLTALDIGENSIGNEGVKSISKL-TELTSLFIDYDDINE 147
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
G L LPNL IL L+G+ I D ++ LK + +S DI VG
Sbjct: 148 EGAKYLC-ELPNLTILDLTGSNIGDEGAKFIGQSTKLKHLFLSLADI----SNVG----- 197
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ L +LN L L L + D L LS+ K L +L++ +TD + + +
Sbjct: 198 ---VNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYLNVSGNQITDEGVVFIREMEN 254
Query: 252 LTNLSIRDAVLTNSG 266
L +SI + +LT G
Sbjct: 255 LKRISITNNLLTAVG 269
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
>gi|290986522|ref|XP_002675973.1| predicted protein [Naegleria gruberi]
gi|284089572|gb|EFC43229.1| predicted protein [Naegleria gruberi]
Length = 234
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+++MK L L++ + IGD+ + + + L +L++SN + G + + L +
Sbjct: 90 FISEMKQLTSLNIGCNRIGDEGAKSITEM-KQLTSLDISNNQIGIEGAKFIT-EMKQLTL 147
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L++S +IDD ++S M L +DISN Q+G E +S + L
Sbjct: 148 LNISSNEIDDEGAKFISEMKQLTSLDISNN-------QIGDEGAKFIS-----EMKQLTL 195
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
LN+ ++ + +S K+L L D+S +Q+
Sbjct: 196 LNISSNEIDNEGAKFISEMKQLTSL--------DISYNQI 227
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 54 GTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 111
G I + A E L+ LD+SN+ + F+T+MK L L++SS+ I D+ +
Sbjct: 103 GCNRIGDEGAKSITEMKQLTSLDISNNQIGIEGAKFITEMKQLTLLNISSNEIDDEGAKF 162
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
++ + L +L++SN + G ++ + L +L++S +ID+ ++S M L +
Sbjct: 163 ISEM-KQLTSLDISNNQIGDEGAKFIS-EMKQLTLLNISSNEIDNEGAKFISEMKQLTSL 220
Query: 172 DISNTDI 178
DIS I
Sbjct: 221 DISYNQI 227
>gi|223698613|gb|ACN18982.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I I + +N L ++ L+ T + I LSF
Sbjct: 50 ITPLANLTNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLISLQQLSF 108
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
+ ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 109 ----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITP 161
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T+L
Sbjct: 162 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 215
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 216 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 271
Query: 246 LSSLSKLTNL 255
+SSL+KL L
Sbjct: 272 VSSLTKLQRL 281
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 46 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 98
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 99 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 158
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 159 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 209
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 210 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 269
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 270 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|46446377|ref|YP_007742.1| hypothetical protein pc0743 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400018|emb|CAF23467.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 765
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 118 NLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
NL+ LNL + AG+ L L L+ L LSG ++ D + +++ + +L+ +D+S+
Sbjct: 284 NLKVLNLQACHNLTDAGLAHLTP-LAALKHLDLSGCELTDDGLVHLTPLAALQHLDLSHC 342
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ F A L+++L L NL+H +L +DA L L L HL L +
Sbjct: 343 --RNFTDAGLAHLKLLVALQHL-NLSHCGKL-------TDAGLAHLKLLVALQHLDLSHC 392
Query: 237 -SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+ TD L L L L +L++ LT++GL P +L+ LDL+G LT+ +
Sbjct: 393 RNFTDAGLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNLTDAGL 450
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 69/302 (22%)
Query: 5 LSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
L +LNL+W G+ L + +L+ LNLS C GN A LA
Sbjct: 459 LQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYC-------GNFTDAGLAH--------- 502
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 118
LT + AL+HLDL + DD + + + A
Sbjct: 503 -----------------------------LTSLAALKHLDLIGCELTDDGLAHLKLLVA- 532
Query: 119 LRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNT 176
L++LNLS + + G+ L L L+ L LSG ++ ++++ + +L+ +++S
Sbjct: 533 LQHLNLSYCGKLTDDGLAHLKL-LVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLS-- 589
Query: 177 DIKGFIQQVGAETD-LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
G TD +++LT L L HL+ + +++ A L L L HL+L +
Sbjct: 590 -------HCGKLTDDGLVNLTPLAALRHLDLSHC--GKLTGAGLAHLKFLVALQHLNLSH 640
Query: 236 -ASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
LTD L LS L L +L + LT++GL + P +L+ LDL LT+D ++
Sbjct: 641 CGKLTDAGLVNLSPLMALQHLDLSHCGNLTDAGLVNLSPLMALQHLDLSHCGNLTDDGLV 700
Query: 294 QF 295
Sbjct: 701 NL 702
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 18 LPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 75
L N +L+ LNL C D+ L A L + L+G ++ L + L L
Sbjct: 279 LKNCENLKVLNLQACHNLTDAGLAHLTPLAALKHLDLSGCELTDDGLVHL-TPLAALQHL 337
Query: 76 DVS---NSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR-FS 130
D+S N + + L + AL+HL+LS + D + + + A L++L+LS+ R F+
Sbjct: 338 DLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLKLLVA-LQHLDLSHCRNFT 396
Query: 131 SAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
AG+ L L L+ L+LS + D +++++ + +L+ +D++ G A
Sbjct: 397 DAGLAHLKL-LVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLN-----GCHNLTDAGL 450
Query: 190 DLVLSLTALQNLN-------------------HLERLNLEQT-QVSDATLFPLSTFKELI 229
+ SL LQ LN L+ LNL +DA L L++ L
Sbjct: 451 THLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGLAHLTSLAALK 510
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHG 283
HL L LTD L L L L +L++ LT+ GL K +L+ LDL G
Sbjct: 511 HLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVALQHLDLSG 565
>gi|194881667|ref|XP_001974943.1| GG22051 [Drosophila erecta]
gi|190658130|gb|EDV55343.1| GG22051 [Drosophila erecta]
Length = 828
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 61 REAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-AN 118
+ AFL I L + N+ +S + L+ + ALE LDL+++ I ++ VG +
Sbjct: 213 KSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTS 270
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNT 176
L L LSN + SS +L LE+L L G ++ DYA S S+ SL+ +D+
Sbjct: 271 LVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQAN 329
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 330 NLNG-----------PLSEQTLPGMRNLETLNLNRNLIKSIQNKALANFSRLVSLSLRHN 378
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 379 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 436
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 71 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 123
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 124 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 183
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 184 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 234
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 235 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 294
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 295 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 332
>gi|325182005|emb|CCA16458.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 708
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 41/278 (14%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G++ L ++S L L++ C + L ++ L + LA T F E +A + L
Sbjct: 428 GLSHLGSLSKLRRLDVRYCKHVAGL--SKEWTQLDMLKLACTEF-KEADASILATMKTLH 484
Query: 74 FLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LD+ +++ CF ++ + +L L ++ + + D+S+ M+ L+ L++S T +
Sbjct: 485 ELDLRCCLVAKGCFSFVSHLNSLVRLCVAETALTDESLIMLCKSLEKLQMLDVSCTEVTD 544
Query: 132 AGV-----------------GIL------AGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
+G GI G L L L+L + D + + + L
Sbjct: 545 SGTMEIEMLGELSELHLDTPGITNRSLERVGKLKKLARLNLFAASVTDEGVEALKRLDKL 604
Query: 169 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKE 227
+ +DI + G + G + AL L L LNL Q ++ ++ L +
Sbjct: 605 QDLDICS----GGVGHRGVK--------ALSQLKRLRSLNLSQNKEIRSQSVVHLEALTK 652
Query: 228 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L L+L N +T LH L +L +L +LS+ VL +S
Sbjct: 653 LRFLNLSNTGITSSCLHNLFALKELESLSVYGVVLESS 690
>gi|115504803|ref|XP_001219194.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|83642676|emb|CAJ16709.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 735
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 19/225 (8%)
Query: 71 LLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
LL LD+S +S+S +++ K L LDLS G + ++ + L LNL
Sbjct: 325 LLRVLDLSGTSISNESLWNISESKLLRRLDLSFCG-GVKDISPISDI-VTLEELNLKGCT 382
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS--------NTDIKG 180
+ GV L G+L NL IL++S T + + +S + SL +D+S ++ ++
Sbjct: 383 SITEGVDKL-GNLVNLHILNMSNTPLQSGFLYNISSIESLVELDLSSCWGVASLDSSVQT 441
Query: 181 FIQQVGAETDL---VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NA 236
++ L + + AL L L LN+ T V+D L L K L+ L+L A
Sbjct: 442 AVRMRKGSYPLARHIEGINALGRLPKLRLLNMSSTPVTDECLHGLQMCKSLVWLNLSLCA 501
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+LTDVS LSS+ L + + G GS + L++LDL
Sbjct: 502 NLTDVS--PLSSVKTLEEVDLGCCGNLKWGAGSLRRLPQLRILDL 544
>gi|443428838|gb|AGC92218.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|46447562|ref|YP_008927.1| hypothetical protein pc1928 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401203|emb|CAF24652.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 138/306 (45%), Gaps = 50/306 (16%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
G+ L +++L+ LNLS C L + LA TF+ L
Sbjct: 236 GLAHLKPLTALQHLNLSGC------------YHLTDVGLAHLTFLTG-----------LQ 272
Query: 74 FLDVSNS---SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF- 129
LD+S + LT + AL++L L D+ +L++LNL +
Sbjct: 273 HLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYL 332
Query: 130 SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN------------- 175
+ AG+ LA L L+ L+LS + + D ++++ ++ +L+++++ N
Sbjct: 333 TDAGLAHLAP-LTGLQHLNLSKCENLTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLT 391
Query: 176 --TDIKGF-IQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
T+++ + Q TD+ L+ LT L++L HL+ E ++D L L+ L HL
Sbjct: 392 PVTNLQHLDLSQCWHLTDIGLAHLTPLKSLQHLDLSRCEN--LTDDGLVHLTPLTALQHL 449
Query: 232 SLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
L +LTD L L+ L+ L +L + LT+ GL P +L+ LDL G T+
Sbjct: 450 DLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDLIGCKNFTD 509
Query: 290 DAILQF 295
D + +F
Sbjct: 510 DGLARF 515
>gi|290982306|ref|XP_002673871.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284087458|gb|EFC41127.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 529
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 43/291 (14%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREA 63
+SF +L +G+ +L + L LN+S C ID+ ++ N L K++++G IN + A
Sbjct: 161 ISFNSLGNSGMKQLK-LDKLTDLNVSYCDIDATGIQFIRNMTCLIKLNISGNN-INCKGA 218
Query: 64 FLYIETSLLSFLDVSNSSLS-------------RFCFLTQ-------------MKALEHL 97
L L LD++++ L +F ++ + LE L
Sbjct: 219 LLLSNLKNLQELDIASACLKEEGAKHISRMDNLKFLSISHNQILNGGAKAISSLSKLEIL 278
Query: 98 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 157
+S+ IG + ++ ++ NL +++ F GV ++A + NL++LS++ + +
Sbjct: 279 HISNCDIGCEGLQYISKNLKNLTEIDIGGNHFGMDGVIVIAS-MNNLKVLSIAESCLGLL 337
Query: 158 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 217
+ Y+S M +L +++IS+ FI + S+ LQNL L N +S
Sbjct: 338 GVQYLSKMENLTYLNISDNIDDIFIGE---------SINDLQNLTTLLYTN---NSLSMD 385
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQL-SSLSKLTNLSIRDAVLTNSGL 267
+S+ +L L++ + ++DV + L SSL L NL +T+ G+
Sbjct: 386 EAITISSLTQLTTLNIESTEISDVHIEILCSSLHHLINLYADTNFITSWGV 436
>gi|238478394|ref|NP_001154318.1| receptor like protein 1 [Arabidopsis thaliana]
gi|332189998|gb|AEE28119.1| receptor like protein 1 [Arabidopsis thaliana]
Length = 1083
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 24 LECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 82
L+ L LSNC++ S + G ++ L + L+ +L + L + +S +SL
Sbjct: 459 LKMLYLSNCSLGSTMLGFLVHQRDLCFVDLSHNKLTGTFPTWLVKNNTRLQTILLSGNSL 518
Query: 83 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 142
++ + L+ LD+SS+MI D E + V NLR +N S+ F + G +
Sbjct: 519 TKLQLPILVHGLQVLDISSNMIYDSIQEDIGMVFPNLRFMNFSSNHFQGT-IPSSIGEMK 577
Query: 143 NLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFI 182
+L++L +S + I ++S SL+ + +SN ++G I
Sbjct: 578 SLQVLDMSSNGLYGQLPIMFLSGCYSLRVLKLSNNQLQGKI 618
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFIQQVGAE--TDLVLSLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G + G + + + +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
>gi|324503154|gb|ADY41375.1| TLR4 interactor with leucine rich repeat [Ascaris suum]
Length = 916
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 25/244 (10%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
LEHL L+ I + V + + LR L+L+ R +S +A H L+ L+L+G
Sbjct: 393 LEHLALTDCNIDEVPVALRSLTA--LRTLSLARNRITSIAKSDIASH-KKLQSLNLAG-- 447
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL-TALQNLNHLERLNLEQT 212
++++ M IS+T ++ FI +G + S+ + L++++ L+L +
Sbjct: 448 ------NFINSMEEGTLGQISDT-LETFI--IGEHNFINESIFNEIAQLHNVKMLDLSKA 498
Query: 213 Q-VSDATLFPLSTFKELI---HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
+SD FP F++LI L+L SLT ++ L+ LT L +R ++
Sbjct: 499 DGISD---FPDGMFEQLIKLQRLNLMGCSLTTITNQTFRGLNNLTELDLRVNLIREVNCD 555
Query: 269 SFKPPRSLKLLDLHGGWLLTEDAIL--QFCKMHPRIEVWHELSVICPSDQIGSNGPSPSR 326
+FK +++ L L G +L + +A + F K+ W+ELS + +D GP+
Sbjct: 556 AFKWLSNVRRLSLAGNYLNSTEACIWRHFDKIEELDLSWNELSDV-QADTFAPMGPTLKV 614
Query: 327 TSLR 330
+LR
Sbjct: 615 LNLR 618
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 153
L LDL ++I + + + + +N+R L+L+ +S I H +E L LS +
Sbjct: 539 LTELDLRVNLIREVNCDAFKWL-SNVRRLSLAGNYLNSTEACIWR-HFDKIEELDLSWNE 596
Query: 154 IDDY-AISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 211
+ D A ++ M P+LK +++ NT++ L A +NL +L RLNL
Sbjct: 597 LSDVQADTFAPMGPTLKVLNLRHNTNLSQ------------LDENAFRNLTNLRRLNLSD 644
Query: 212 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
T ++ F L+ L L + + L + H L + SK N
Sbjct: 645 TAITHIDRFILAHLTSLEALDISGSHLASMDQHSLDAQSKTLN 687
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 26/247 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I I + +N L ++ L+ T I++ A + + L
Sbjct: 100 ITPLANLTNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGLTS--LQQ 155
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
L S++ ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 156 LSFSSNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 212
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T+L
Sbjct: 213 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 266
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 267 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 322
Query: 246 LSSLSKL 252
+SSL+KL
Sbjct: 323 VSSLTKL 329
>gi|17564444|ref|NP_504310.1| Protein T19H12.2 [Caenorhabditis elegans]
gi|74956055|sp|O01615.1|AN322_CAEEL RecName: Full=Acidic leucine-rich nuclear phosphoprotein 32-related
protein 2; AltName: Full=ANP32/acidic nuclear
phosphoprotein-like protein 2
gi|373219310|emb|CCD66998.1| Protein T19H12.2 [Caenorhabditis elegans]
Length = 225
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 86 CFLTQMK------ALEHLDLSSSMIGDD-SVEMVACVGANLRNLNLSNTRFSSAGVGILA 138
C LT +K AL +LDLS + +GDD S +++ ++ + LS R + V L
Sbjct: 48 CGLTTLKGMPVLPALNYLDLSDNELGDDASFDVLIKCAPEIKKITLSGNRLTLDNVRTLK 107
Query: 139 GHLPNLEILSLSGTQ----IDDYAISYMSMMPSLKFIDISNTD 177
LPNL L LS +DDY + M+PSLK +D + D
Sbjct: 108 -MLPNLMELDLSNNSSLGLLDDYRVKMFEMIPSLKILDGCDVD 149
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFIQQVGAE--TDLVLSLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G + G + + + +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|393906566|gb|EJD74322.1| CBR-PAN-1 protein [Loa loa]
Length = 612
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVAC 114
I E ++ + L LD+ + +S L ++K L+ L LS + I + +
Sbjct: 119 IIKRIEPVMFKDLDRLEVLDLGGNKISSIVAGELDRLKDLDMLILSDNQISNIEDGAFSF 178
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ NLR LNL+N + ++ VG G L NLE L L I + + + +L+++++
Sbjct: 179 L-TNLRTLNLANNKLTNISVGTFRG-LNNLETLHLQSNNIMYVNWNAFTQLKNLRYLNLG 236
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
N I S L+ L LE+L + + L + L LSL
Sbjct: 237 NNHI---------------SRVDLRGLKSLEKLFINNNSIQSMKNITLRDLRSLALLSLD 281
Query: 235 NASLTDV---SLHQLSSLSKLTNLSI 257
S+T++ LH L S+L+ SI
Sbjct: 282 RNSITEILNGDLHSLDESSRLSTFSI 307
>gi|371942110|gb|AEX60867.1| internaline [Listeria monocytogenes]
gi|371942112|gb|AEX60868.1| internaline [Listeria monocytogenes]
Length = 789
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|133754279|gb|ABO38434.1| Toll receptor [Penaeus monodon]
Length = 931
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
NL+ L L + F+S +L + P LE G ++ + + P+L ++ N
Sbjct: 134 TNLQTLQLVDNNFTSFPPALLT-NTPKLEFFRFIGNRVGSLPHTMFASTPNLVMAELGNN 192
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ DL +LT L N++ L Q++D S L L LR+
Sbjct: 193 GL------TSVPEDLFANLTKLLNVS------LWNNQLTDIQRSLFSDITGLRFLDLRDN 240
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L+D++ Q + L L++ ++N SF RSL+ L+LH WL
Sbjct: 241 FLSDITNRQFQGMKILKRLNLGGNRISNLNKDSFGDLRSLEELELHSNWL 290
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|440291484|gb|ELP84753.1| F-box/leucine rich repeat protein, putative [Entamoeba invadens
IP1]
Length = 691
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 126/274 (45%), Gaps = 32/274 (11%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAP--LAKISLAGTTFINEREAFLYIETSLL 72
VT+L N++SL+C ++ ++ ++ + + P + + N + +Y + L
Sbjct: 117 VTRLINLTSLKCGKINQACLEQQIQLKQLECPGVVPPFGVESICTNNMEKLGMYNSLTAL 176
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
++VS+ ++ F L ++ +L L ++S + +G +E + ++L +L +S+ S
Sbjct: 177 ELVNVSDKEITSFVKLGRLTSLRKLSIASKNFVG--KIETFVDI-SHLTSLEISDAPLGS 233
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
L P L + + Q+ IS P +S TD GFI VG
Sbjct: 234 EFFYNLY-LFPYLVFIGFTRCQLPVSGIS-----PQTPLSQLSTTD--GFIYIVGC---- 281
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSS-- 248
N L L L ++QVS+ L ++ + LI LSL+ AS+ D SL+ +
Sbjct: 282 ----------NSLRYLYLNESQVSNYHLDVIARMENLIGLSLKGCASVNDYSLNAFKNGP 331
Query: 249 -LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L L++ D ++T+ GL + + L++LD+
Sbjct: 332 ISYSLEELNVEDTMITHIGLQTISRIKYLRVLDI 365
>gi|343423407|emb|CCD18182.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGF-----IQQVGAET 189
G +P L +L+L + D + ++ SL ++++ TD++ ++QV
Sbjct: 129 GRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSG 188
Query: 190 DL--VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 246
V L AL +L L LNL+ T V+D L LS K L+ L L + LTDV+ L
Sbjct: 189 SFPGVRGLGALGSLPRLRELNLKHTAVTDDCLKTLSASKTLVRLFLGDCRRLTDVT--PL 246
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 296
+S L + + D G+G F L LL L G LT++ + + C
Sbjct: 247 VKISSLQVVDLSDCSGITKGMGGFGTLPGLYLLSLTGTA-LTDEQLQELC 295
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 26/298 (8%)
Query: 2 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
P L L L GVT L SL LNL+ C+ + +E + L +++L+G+
Sbjct: 131 MPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSGS- 189
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVAC 114
F R L L++ +++++ C L+ K L L L D +V
Sbjct: 190 FPGVRGLGALGSLPRLRELNLKHTAVTDDCLKTLSASKTLVRLFLGDCRRLTDVTPLVKI 249
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI- 173
++L+ ++LS+ + G+G G LP L +LSL+GT + D + + SL+ + I
Sbjct: 250 --SSLQVVDLSDCSGITKGMGGF-GTLPGLYLLSLTGTALTDEQLQELCASQSLESLSIK 306
Query: 174 -----SNTDIKGFIQQVG----AETDLVL-SLTALQNLNHLERLNLEQTQVSDATLFPLS 223
++ + GF+ + +E D V + L L L + T+V++ L ++
Sbjct: 307 RCKLLTDVGVLGFVTTLRELDMSECDGVARGFCSFSALRELRSLYMTFTRVTNECLCEIA 366
Query: 224 TFKELIHLSLRNA-SLTDVS-LHQLSSLSKLTNLSIRDAVLTNSG-LGSFKPPRSLKL 278
+L+ LS+ LTD+S L Q+ +L L N+++ + + G LG + R+L++
Sbjct: 367 KCTQLVKLSVAGCKKLTDISCLAQVHTLEDL-NVNMCEHIDDGLGVLGGLEELRTLRM 423
>gi|294358387|gb|ADE73846.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I I + +N L ++ L+ T + I LSF
Sbjct: 135 ITPLANLTNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLISLQQLSF 193
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
+ ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 194 ----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 246
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T+L
Sbjct: 247 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 300
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 301 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 356
Query: 246 LSSLSKLTNL 255
+SSL+KL L
Sbjct: 357 VSSLTKLQRL 366
>gi|223698682|gb|ACN19028.1| internalin A [Listeria monocytogenes]
Length = 712
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 17 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 69
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 70 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 129
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 130 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 180
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 181 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 240
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 241 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 26/247 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I I + +N L ++ L+ T I++ A + + L
Sbjct: 100 ITPLANLTNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGLTS--LQQ 155
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
L S++ ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 156 LSFSSNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 212
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T+L
Sbjct: 213 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 266
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 267 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 322
Query: 246 LSSLSKL 252
+SSL+KL
Sbjct: 323 VSSLTKL 329
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|443428862|gb|AGC92230.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I + L+ +N L ++ L+ T + I LSF
Sbjct: 135 ITPLANLTNLTGLTLFNNQI-TDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSF 193
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
+ ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 194 ----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITP 246
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I + + +L +D++N I G T+L
Sbjct: 247 LGILT----NLDELSLNGNQLKD--IGTLGSLTNLTDLDLANNQISNLAPLSGLTKLTEL 300
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 301 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 356
Query: 246 LSSLSKLTNL 255
+SSL+KL L
Sbjct: 357 VSSLTKLQRL 366
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|307107435|gb|EFN55678.1| hypothetical protein CHLNCDRAFT_133919 [Chlorella variabilis]
Length = 553
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFS 130
L+ + VS+ +L+ L + L L+L + GD S+ V+ LR L+L T S
Sbjct: 232 LAGVRVSDEALAAL--LRHLPHLRALNLERCLQAGDASLAAVSQRALQLRELHLGYTAVS 289
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
G+ +L L L +LSL + D ++ +S + ++ +D+S+T ET
Sbjct: 290 DRGLLLLG-GLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDTSASN-------ET- 340
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
++ + + LE LNL T V+D L L L L+L + TD + ++ L+
Sbjct: 341 ----MSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDSRHFTDAGMVSVAQLA 396
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 284
L L + A + ++G S ++L+ L++ GG
Sbjct: 397 GLECLDLFGARIGDAGCASLSKLKNLRRLEVCGG 430
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 81/201 (40%), Gaps = 41/201 (20%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMV-----ACVG--ANLRNLNLSNTRFSSAGVGILAGH 140
L Q++ LE LD+ DDS V AC+ LR LNL+ R S + L H
Sbjct: 189 LAQLRQLEQLDVGWCSSLDDSDAQVTDHGLACLHSLGQLRALNLAGVRVSDEALAALLRH 248
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
LP+L L+L Q G + +S ALQ
Sbjct: 249 LPHLRALNLE------------------------------RCLQAGDASLAAVSQRALQ- 277
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L L+L T VSD L L +L LSL N S+ D L LS L+++ L + D
Sbjct: 278 ---LRELHLGYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDT 334
Query: 261 VLTNSGLGSFKPPRSLKLLDL 281
+N + + R L+ L+L
Sbjct: 335 SASNETMSTVAAMRQLECLNL 355
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 38/251 (15%)
Query: 4 RLSFLNLAWTGVTK------LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA---- 53
+L LNLA V+ L ++ L LNL C + G+ + A +++ +L
Sbjct: 226 QLRALNLAGVRVSDEALAALLRHLPHLRALNLERC----LQAGDASLAAVSQRALQLREL 281
Query: 54 --GTTFINEREAFLYIETSLLSFLDVSNSS-----LSRFCFLTQMKALEHLDLSSSMIGD 106
G T +++R L + L L + N S L+ LTQM+ LDLS + +
Sbjct: 282 HLGYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMR---QLDLSDTSASN 338
Query: 107 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 166
+++ VA + L LNLS T + G+ L L +L L+L D + ++ +
Sbjct: 339 ETMSTVAAM-RQLECLNLSFTGVNDLGLKRLR-RLSSLRCLNLDSRHFTDAGMVSVAQLA 396
Query: 167 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L+ +D+ F ++G +L L +L RL + V+DA + L
Sbjct: 397 GLECLDL-------FGARIGDA-----GCASLSKLKNLRRLEVCGGGVTDAGVAHLVALT 444
Query: 227 ELIHLSLRNAS 237
L HLSL AS
Sbjct: 445 RLQHLSLAQAS 455
>gi|112961787|gb|ABI28544.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 99 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 151
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 152 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 209
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 210 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 262
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290996013|ref|XP_002680577.1| predicted protein [Naegleria gruberi]
gi|284094198|gb|EFC47833.1| predicted protein [Naegleria gruberi]
Length = 395
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 42/306 (13%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF--I 58
+ P+L+ L L+ + I + L + N + + I++G E L +++ + +
Sbjct: 29 LMPKLTELKLSKHTFNDIEPIGKFKQLTILNISDNPIMKGVEAIGLLKQLTELDVRYCRM 88
Query: 59 NEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKAL---------------------- 94
E + + + L+ LD+S++S+ F F+ +MK L
Sbjct: 89 GEEGSKIISKLGQLTNLDISHNSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLK 148
Query: 95 --EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 152
LD+S + I D+ + + + L L++S S+ GV L+ L L L++S
Sbjct: 149 QLTKLDISGNNIDDEGAKSIGQL-KQLTKLDISVNYLSNVGVKHLS-DLQQLIYLNVSYN 206
Query: 153 QIDDYAISYMSMMPSLKFIDISNTD--IKGF--IQQVGAETDLVLSLTALQN-------- 200
+D+ + M L ++I D I+ F I ++ L + L N
Sbjct: 207 DVDEEVAKDIYNMKKLSKLNIGGNDLNIESFSMIGKMDHLKKLEFGVVGLGNDGFEFISK 266
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
L HL L++ + Q++D LS + L L + S+ D + +S L KLT+L+ R+
Sbjct: 267 LKHLTMLDISENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNARNN 326
Query: 261 VLTNSG 266
N G
Sbjct: 327 EFGNEG 332
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
L +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|290990083|ref|XP_002677666.1| predicted protein [Naegleria gruberi]
gi|284091275|gb|EFC44922.1| predicted protein [Naegleria gruberi]
Length = 262
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 48/284 (16%)
Query: 2 FPRLSFLNLAWTGV---TKLPNISSLECLNLSNCTIDSILEG----NENKAPLAKISLAG 54
+L+ LN+ + V L + L CLN+++ I LEG EN L + +
Sbjct: 5 LKQLNSLNIGYCSVEDIAPLGQLKDLTCLNINHIPIG--LEGLKIIGENLQQLKSLDVTN 62
Query: 55 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 114
NE ++ +L S F+ K L+ ++ S M
Sbjct: 63 CGITNEAAQYIRQLNNLESL---------TITFVFYQKCLKGVEALSEM----------- 102
Query: 115 VGANLRNLNLSNTRFSSAGVGI-LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
L++LN+ N+ G L L NL L + GT I+D ++S + L+F+D+
Sbjct: 103 --KQLKSLNIGNSSDIGGPQGAKLISSLYNLTSLRMDGTMIEDEGARFISELKHLRFLDL 160
Query: 174 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
+ +I GA++ + L H+ L++ + + D ++T +L L L
Sbjct: 161 TGNNIS----DEGAKS--------ISGLKHVTDLDMARNDIGDEGAKAIATMNQLKRLIL 208
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG----SFKPP 273
N + D + L +L +L++ +T + SF PP
Sbjct: 209 DNNKIGDDGAQYIGKLPQLRSLAVCGNRITPVSIQNLRMSFSPP 252
>gi|22347552|gb|AAM95921.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 135
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 136 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 188
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 189 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 242
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 243 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 299
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 300 -PVSSLTKLQRL 310
>gi|238478392|ref|NP_001154317.1| receptor like protein 1 [Arabidopsis thaliana]
gi|332189997|gb|AEE28118.1| receptor like protein 1 [Arabidopsis thaliana]
Length = 913
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 24 LECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 82
L+ L LSNC++ S + G ++ L + L+ +L + L + +S +SL
Sbjct: 289 LKMLYLSNCSLGSTMLGFLVHQRDLCFVDLSHNKLTGTFPTWLVKNNTRLQTILLSGNSL 348
Query: 83 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 142
++ + L+ LD+SS+MI D E + V NLR +N S+ F + G +
Sbjct: 349 TKLQLPILVHGLQVLDISSNMIYDSIQEDIGMVFPNLRFMNFSSNHFQGT-IPSSIGEMK 407
Query: 143 NLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFI 182
+L++L +S + I ++S SL+ + +SN ++G I
Sbjct: 408 SLQVLDMSSNGLYGQLPIMFLSGCYSLRVLKLSNNQLQGKI 448
>gi|223006802|gb|ACM69358.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290970038|ref|XP_002668017.1| predicted protein [Naegleria gruberi]
gi|284081041|gb|EFC35273.1| predicted protein [Naegleria gruberi]
Length = 306
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F++ MK L LD+S + D+ + ++ + L +L +S G ++ + L
Sbjct: 96 FISGMKQLTSLDISFNQASDEGAKYISEM-KQLTSLGISKNLIGDEGAKYIS-EMKQLTS 153
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAETDL--------VLS 194
L+L +I D Y+S M L +DIS+ D++G FI+++ T L V
Sbjct: 154 LNLYYNEICDEGAKYISEMEQLTSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIGVEG 213
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+ + L LN+ ++ D +S K+LI L + + D + + +LT+
Sbjct: 214 AKYISEMKQLTSLNITNNEIGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQLTS 273
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L+I + + G + L LD+
Sbjct: 274 LNISGNEIGDEGAKYISDMKQLTSLDI 300
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 81 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
S + F++ MK L LD+S + IG V+ ++ + L +L++S + S G ++
Sbjct: 66 SFEKLKFISDMKRLTSLDISFNQIGVQGVKFISGM-KQLTSLDISFNQASDEGAKYIS-E 123
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLS-- 194
+ L L +S I D Y+S M L +++ +I +I ++ T L +S
Sbjct: 124 MKQLTSLGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSN 183
Query: 195 ------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
+ ++ + L LN+ + +S K+L L++ N + D +S
Sbjct: 184 LIDVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLNITNNEIGDEGAKYISE 243
Query: 249 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
+ +L +L I + + G L L++ G + E A
Sbjct: 244 MKQLISLIISRNQIGDEGAKYICEMEQLTSLNISGNEIGDEGA 286
>gi|167862032|gb|ACA05715.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|261334051|emb|CBH17045.1| T. brucei spp.-specific protein [Trypanosoma brucei gambiense
DAL972]
Length = 1399
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 128/309 (41%), Gaps = 42/309 (13%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIET-S 70
+GV L + L LN+ I S+ G L +++L T ++ EA I T
Sbjct: 432 SGVCCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLTLESITGLSNVEALANILTLE 491
Query: 71 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS----- 125
LS L + C L + L+ LDLS + DS+ + CV + +LNLS
Sbjct: 492 KLSLLGCNGIDAGIGC-LGNLPQLKVLDLSGTNTDSDSLRGL-CVSQTIVSLNLSHCWKV 549
Query: 126 ------------NTRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSL 168
N S + I AG L L + LS T I D IS+ S L
Sbjct: 550 TSVFHISALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKEL 609
Query: 169 KFIDISNTDIKGFIQQVGAET---DLVL--------SLTALQNLNHLERLNLEQTQVSDA 217
+D+S D I + T DL L L+ L L L LN++ ++++
Sbjct: 610 VTLDLSFCDELFDITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNS 669
Query: 218 TLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
+ L K + L L N L+DV+ LSSLS L L++ SG+G+ L
Sbjct: 670 VIGSLGNGKSFVKLILDNCKGLSDVTF--LSSLSTLKELNLHHCDAVTSGIGTLGRLLQL 727
Query: 277 KLLDLHGGW 285
++LDL GW
Sbjct: 728 RVLDL--GW 734
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|112961793|gb|ABI28548.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 99 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 151
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 152 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 209
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 210 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 262
>gi|112959464|gb|ABI27259.1| internalin A [Listeria monocytogenes]
Length = 698
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 101 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 153
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 154 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 211
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 212 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 264
>gi|240254032|ref|NP_172219.5| receptor like protein 1 [Arabidopsis thaliana]
gi|332189996|gb|AEE28117.1| receptor like protein 1 [Arabidopsis thaliana]
Length = 1034
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 24 LECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 82
L+ L LSNC++ S + G ++ L + L+ +L + L + +S +SL
Sbjct: 410 LKMLYLSNCSLGSTMLGFLVHQRDLCFVDLSHNKLTGTFPTWLVKNNTRLQTILLSGNSL 469
Query: 83 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 142
++ + L+ LD+SS+MI D E + V NLR +N S+ F + G +
Sbjct: 470 TKLQLPILVHGLQVLDISSNMIYDSIQEDIGMVFPNLRFMNFSSNHFQGT-IPSSIGEMK 528
Query: 143 NLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFI 182
+L++L +S + I ++S SL+ + +SN ++G I
Sbjct: 529 SLQVLDMSSNGLYGQLPIMFLSGCYSLRVLKLSNNQLQGKI 569
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|112961781|gb|ABI28540.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 99 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 151
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 152 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 209
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 210 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 262
>gi|112961610|gb|ABI28426.1| internalin A [Listeria monocytogenes]
gi|112961613|gb|ABI28428.1| internalin A [Listeria monocytogenes]
gi|112961625|gb|ABI28436.1| internalin A [Listeria monocytogenes]
gi|112961628|gb|ABI28438.1| internalin A [Listeria monocytogenes]
gi|112961631|gb|ABI28440.1| internalin A [Listeria monocytogenes]
gi|112961634|gb|ABI28442.1| internalin A [Listeria monocytogenes]
gi|112961670|gb|ABI28466.1| internalin A [Listeria monocytogenes]
gi|112961673|gb|ABI28468.1| internalin A [Listeria monocytogenes]
gi|112961676|gb|ABI28470.1| internalin A [Listeria monocytogenes]
gi|112961688|gb|ABI28478.1| internalin A [Listeria monocytogenes]
gi|112961703|gb|ABI28488.1| internalin A [Listeria monocytogenes]
gi|112961712|gb|ABI28494.1| internalin A [Listeria monocytogenes]
gi|112961715|gb|ABI28496.1| internalin A [Listeria monocytogenes]
gi|112961724|gb|ABI28502.1| internalin A [Listeria monocytogenes]
gi|112961733|gb|ABI28508.1| internalin A [Listeria monocytogenes]
gi|112961736|gb|ABI28510.1| internalin A [Listeria monocytogenes]
gi|112961739|gb|ABI28512.1| internalin A [Listeria monocytogenes]
gi|112961742|gb|ABI28514.1| internalin A [Listeria monocytogenes]
gi|112961745|gb|ABI28516.1| internalin A [Listeria monocytogenes]
gi|112961754|gb|ABI28522.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 86 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 142
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 143 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 195
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 196 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 249
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 250 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 306
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 307 -PVSSLTKLQRL 317
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 202 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 254
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 255 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 312
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 313 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 365
>gi|406834746|ref|ZP_11094340.1| hypothetical protein SpalD1_23989 [Schlesneria paludicola DSM
18645]
Length = 163
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LTAL+ L L L L +T++SD L LS+ EL LSL + TD L L +L++L
Sbjct: 77 LTALKTLPKLRNLFLGKTKISDEGLAHLSSITELQTLSLNSTQSTDAGLKSLRTLTQLKT 136
Query: 255 LSIRDAVLTNSGLGSFK 271
L++++ T +G+ S +
Sbjct: 137 LNLQETATTTTGIASLR 153
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 159 ISYMS----MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN------------ 202
+S+MS M L+ + I + G Q TD ++ +Q L
Sbjct: 1 MSFMSHAGAMRSPLQILTIIAFGVFGCSQDSKGHTDEANTVAMIQKLGGKVEYDGPGPDR 60
Query: 203 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 262
+ ++ L +T V D+ L L T +L +L L ++D L LSS+++L LS+
Sbjct: 61 RVTKVYLHRTSVQDSDLTALKTLPKLRNLFLGKTKISDEGLAHLSSITELQTLSLNSTQS 120
Query: 263 TNSGLGSFKPPRSLKLLDLH 282
T++GL S + LK L+L
Sbjct: 121 TDAGLKSLRTLTQLKTLNLQ 140
>gi|313485058|gb|ADR53003.1| InlA [Listeria monocytogenes]
Length = 765
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167861930|gb|ACA05664.1| InlA [Listeria monocytogenes]
gi|167862036|gb|ACA05717.1| InlA [Listeria monocytogenes]
gi|194239408|emb|CAQ76844.1| internalin A [Listeria monocytogenes]
gi|222543296|gb|ACM66668.1| internalin A [Listeria monocytogenes]
gi|298359976|gb|ADI77567.1| internalin A [Listeria monocytogenes]
gi|298360582|gb|ADI77870.1| internalin A [Listeria monocytogenes]
gi|298360712|gb|ADI77935.1| internalin A [Listeria monocytogenes]
gi|298360716|gb|ADI77937.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112961784|gb|ABI28542.1| internalin A [Listeria monocytogenes]
gi|112961796|gb|ABI28550.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 99 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 151
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 152 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 209
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 210 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 262
>gi|112961778|gb|ABI28538.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 99 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 151
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 152 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 209
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 210 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 262
>gi|371942136|gb|AEX60880.1| internaline [Listeria monocytogenes]
Length = 789
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|302793791|ref|XP_002978660.1| hypothetical protein SELMODRAFT_109190 [Selaginella moellendorffii]
gi|300153469|gb|EFJ20107.1| hypothetical protein SELMODRAFT_109190 [Selaginella moellendorffii]
Length = 735
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
FL +K L L+L S S+ NL+ L+LS+ + + G L NLE
Sbjct: 543 FLANLKNLTVLNLQGSWF-TGSIPSSLSKLKNLQTLDLSDGFRLTGSIPAFLGSLQNLEY 601
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L LSGT+ + +P L+F+DISNT + I L L LE
Sbjct: 602 LDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSSSIP------------VELGKLTSLET 649
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTD---VSLHQLSSLSKLTNLSI 257
L + T+ + L K+L L L +NA + S QLSSL +L+ SI
Sbjct: 650 LRISGTKAAGRIPDTLGNLKKLKVLELSQNAGMRGPIPSSFGQLSSLKELSVSSI 704
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA-PLAKISLAGTTFINERE 62
+L L L T +L ++S L LN+ ++D + K L + L F
Sbjct: 71 KLESLGLTGTLSPELGSLSHLRTLNVHGNSMDGPIPSTFGKLLRLEVLDLGSNFFSGALP 130
Query: 63 AFLYIETSLLSFLDVSN--SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
A L S L LD+S S+ S FL ++ L L+L S S+ NL+
Sbjct: 131 ASLAQLASTLQTLDLSADASAGSIPSFLANLENLTILNLQGSWF-TGSIPSSLSKLKNLQ 189
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+LS+ + + G L NLE L LSGT+ + +P L+F+DISNT +
Sbjct: 190 TLDLSDGLRLTGSIPAFLGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSS 249
Query: 181 FIQ-QVGAETDL-VLSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
I ++G T L L ++ L NL L+ L L Q + P S+F +L
Sbjct: 250 SIPVKIGKLTSLETLRISGTKAAGRIPDTLGNLKKLKVLELSQNAGMRGPI-P-SSFGQL 307
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
L + S T ++ SSL +L+ L ++ V++NS GS P SL LL
Sbjct: 308 SSLEELSVSSTGLTGQIPSSLGQLSRL-VKLDVMSNSLSGSI--PESLGLL 355
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 147 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 199
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 200 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 257
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 258 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|46447250|ref|YP_008615.1| hypothetical protein pc1616 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400891|emb|CAF24340.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 813
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 41/280 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
TG+ L ++++L+ L+LS C + + G ++ A Y++ S
Sbjct: 369 TGLAHLTSLTALQHLDLSECYL---------------LKDTGLAHLSSLTALQYLDLS-- 411
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSS--MIGDDSVEMVACVGANLRNLNLSNTR-F 129
D N + + LT + +L+HLDLS S + GD + V LR+L LS+ R
Sbjct: 412 ---DSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVA--LRHLGLSDCRNL 466
Query: 130 SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
+ AG+ L L L L LS + + D + ++S + +L+++ ++
Sbjct: 467 TDAGLAHLTP-LVALRHLDLSECKNLTDDGLVHLSSLVALQYLS---------LKLCENL 516
Query: 189 TDLVLS-LTALQNLNHLE-RLNLEQTQ-VSDATLFPLSTFKELIHLSLR-NASLTDVSLH 244
TD L+ LT L L HL+ L+L ++D L LS+ L HL L +LTD L
Sbjct: 517 TDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLA 576
Query: 245 QLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 283
L+ L+ L +L + LT+ GL P +L+ L L G
Sbjct: 577 HLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKG 616
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLS--SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
D N + + LT + AL HLDLS ++ D V + + V +L L + AG
Sbjct: 462 DCRNLTDAGLAHLTPLVALRHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCE-NLTDAG 520
Query: 134 VGILAGHLPNLEILSLS-----GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
+ L L LE L L + D ++++S + +LK +D+S + + G
Sbjct: 521 LAHLTP-LTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALKHLDLS---WRENLTDAG-- 574
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
+ LT L L HL+ E ++D L L+ L +LSL+ + +TD L L+
Sbjct: 575 ---LAHLTPLTALRHLDLSWCEN--LTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAH 629
Query: 249 LSKLTNLSIRDAVLTNS-GLGSFKPPRSLKLLDLHGGW 285
LS L +LS+ D N GL +L+ LDL G +
Sbjct: 630 LSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGCY 667
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 88 LTQMKALEHLDLSSSM-----IGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHL 141
LT + LEHLDL + + DD + ++ + A L++L+LS + AG+ L L
Sbjct: 524 LTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTA-LKHLDLSWRENLTDAGLAHLTP-L 581
Query: 142 PNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
L L LS + + D ++Y++ + +L+++ + +DI TD L L +
Sbjct: 582 TALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDI----------TDE--GLEHLAH 629
Query: 201 LNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 258
L+ L L+L + ++ L L++ L HL L L L LSSL L +L++
Sbjct: 630 LSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLS 689
Query: 259 DAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
+ L + GL P +L+ LDL G LT+ +
Sbjct: 690 ECFGLCHDGLEDLTPLMNLQYLDLSGCINLTDQGL 724
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISNT 176
+ LNLS F + + + NL++L L T ID +++++ + +L+ +D+S
Sbjct: 330 IEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDT-GLAHLTSLTALQHLDLSEC 388
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RN 235
+ ++ G + SLTALQ L+ + N +DA L L+ L HL L ++
Sbjct: 389 YL---LKDTGLAH--LSSLTALQYLDLSDSGNF-----TDAGLAHLTPLVSLQHLDLSKS 438
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 294
+LT L L+ L L +L + D LT++GL P +L+ LDL LT+D ++
Sbjct: 439 ENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKNLTDDGLVH 498
Query: 295 F 295
Sbjct: 499 L 499
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698883|gb|ACN19162.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 118 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 170
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 171 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 228
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 229 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821288|gb|ACL37770.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 133
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 134 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 186
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 187 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 240
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 241 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 297
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 298 -PVSSLTKLQRL 308
>gi|196232824|ref|ZP_03131674.1| hypothetical protein CfE428DRAFT_4841 [Chthoniobacter flavus
Ellin428]
gi|196223023|gb|EDY17543.1| hypothetical protein CfE428DRAFT_4841 [Chthoniobacter flavus
Ellin428]
Length = 298
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT-DIKGF--------- 181
A V LA LP LE L L GT + + +S + +LK + IS+ IKG
Sbjct: 83 AAVARLA-RLP-LEGLGLDGTSVTEAVFKTLSQIKTLKQLGISHALGIKGVGADALANHP 140
Query: 182 ---IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR---N 235
I +G + AL +L L +L L QV+DA L L+ L L
Sbjct: 141 VLAIVSIGGTGFGDAGMKALASLRQLTKLGLNHDQVTDAGLAALANHPALETLMFSPQMT 200
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+TD SL +++L L L I D VLT G
Sbjct: 201 PRITDASLQTVATLKALKELQINDTVLTYDG 231
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|294358389|gb|ADE73847.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112959452|gb|ABI27253.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|440717669|ref|ZP_20898151.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
gi|436437289|gb|ELP30945.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
Length = 442
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L L L TGVT L +S L ++L N I G+ LAKI T I+
Sbjct: 145 LDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNI-----GDAGMDSLAKIK----TLID 195
Query: 60 ER-EAFLYIETSLLSFLDVSNSSLS-RFC---------FLTQMKALEHLDLSSSMIGDDS 108
+ E + L+ + S++ +C L Q LE+L S I D S
Sbjct: 196 VKLEKSKVTDEGLVKLAPLPLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDAS 255
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 168
+ + + + L+ L + + G+ +AG+ L L + +DD + +S +P++
Sbjct: 256 MAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDGLKVISQLPAV 313
Query: 169 KFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVS 215
+DIS + I Q+G L +L +L +LE LNL+ T V+
Sbjct: 314 THVDISECRLASPEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVT 373
Query: 216 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
D +L L +L L++ L D S +L+ L L ++++
Sbjct: 374 DESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 415
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L++L +L+RL L T ++D TL + L L LR +TD L L+ LSKL + +
Sbjct: 115 LKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL 174
Query: 258 RDAVLTNSGLGSFKPPRSL 276
R+ + ++G+ S ++L
Sbjct: 175 RNTNIGDAGMDSLAKIKTL 193
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
+PN + +G IDD + + + +LK + +++T I TD +L +
Sbjct: 94 IPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAI----------TDQ--TLKTVGE 141
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 260
+ L+ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 142 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKS 201
Query: 261 VLTNSGLGSFKP 272
+T+ GL P
Sbjct: 202 KVTDEGLVKLAP 213
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 37/190 (19%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
ANL+ L L++T + + + G + +L+ L L T + D + ++ + L+ ID+ NT
Sbjct: 119 ANLKRLTLADTAITDQTLKTV-GEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNT 177
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS------------- 223
+I + +L + L + LE+++V+D L L+
Sbjct: 178 NIGDA------------GMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLPLKSINFNYCT 225
Query: 224 -----TFKELIHL-SLRN-----ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
T K L +L N + + D S+ +L LSKL L IR +T G+
Sbjct: 226 TINGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAG 285
Query: 273 PRSLKLLDLH 282
++L +L
Sbjct: 286 NKALARFELR 295
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 15 VTKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
+ +L +S L+ L + C + + I NKA LA+ L ++ +++ + + +
Sbjct: 256 MAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKA-LARFELRDSS-VDDDGLKVISQLPAV 313
Query: 73 SFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNT 127
+ +D+S L+ L ++ L +L L + D E +A G NL LNL +T
Sbjct: 314 THVDISECRLASPEGIAQLGKLIGLTYLGLWETKTND---ETLAGFGDLVNLEELNLKST 370
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
+ + +L + L+ L+++GTQ+ D + ++ +P+LK ++++NT I GF
Sbjct: 371 AVTDESLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI-GF 422
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|322952096|gb|ADX21047.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821339|gb|ACL37804.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 202 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 254
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 255 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 312
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 313 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 365
>gi|313485081|gb|ADR53011.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|284800720|ref|YP_003412585.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284993906|ref|YP_003415674.1| Internalin A [Listeria monocytogenes 08-5923]
gi|130774827|gb|ABO32426.1| InlA [Listeria monocytogenes]
gi|167862038|gb|ACA05718.1| InlA [Listeria monocytogenes]
gi|194326145|emb|CAQ77231.1| internalin A [Listeria monocytogenes]
gi|194326165|emb|CAQ77241.1| internalin A [Listeria monocytogenes]
gi|284056282|gb|ADB67223.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284059373|gb|ADB70312.1| Internalin A [Listeria monocytogenes 08-5923]
gi|298359730|gb|ADI77444.1| internalin A [Listeria monocytogenes]
gi|298359786|gb|ADI77472.1| internalin A [Listeria monocytogenes]
gi|298359904|gb|ADI77531.1| internalin A [Listeria monocytogenes]
gi|298359978|gb|ADI77568.1| internalin A [Listeria monocytogenes]
gi|298360068|gb|ADI77613.1| internalin A [Listeria monocytogenes]
gi|298360228|gb|ADI77693.1| internalin A [Listeria monocytogenes]
gi|298360452|gb|ADI77805.1| internalin A [Listeria monocytogenes]
gi|298360556|gb|ADI77857.1| internalin A [Listeria monocytogenes]
gi|298360576|gb|ADI77867.1| internalin A [Listeria monocytogenes]
gi|298360600|gb|ADI77879.1| internalin A [Listeria monocytogenes]
gi|298360678|gb|ADI77918.1| internalin A [Listeria monocytogenes]
gi|443428872|gb|AGC92235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112959508|gb|ABI27281.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|112959506|gb|ABI27280.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|22347562|gb|AAM95926.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 147 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 199
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 200 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 257
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 258 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|219821312|gb|ACL37786.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821297|gb|ACL37776.1| internalin A [Listeria monocytogenes]
gi|219821303|gb|ACL37780.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|223698610|gb|ACN18980.1| internalin A [Listeria monocytogenes]
gi|223698616|gb|ACN18984.1| internalin A [Listeria monocytogenes]
gi|223698631|gb|ACN18994.1| internalin A [Listeria monocytogenes]
gi|223698637|gb|ACN18998.1| internalin A [Listeria monocytogenes]
gi|223698640|gb|ACN19000.1| internalin A [Listeria monocytogenes]
gi|223698649|gb|ACN19006.1| internalin A [Listeria monocytogenes]
gi|223698652|gb|ACN19008.1| internalin A [Listeria monocytogenes]
gi|223698661|gb|ACN19014.1| internalin A [Listeria monocytogenes]
gi|223698667|gb|ACN19018.1| internalin A [Listeria monocytogenes]
gi|223698676|gb|ACN19024.1| internalin A [Listeria monocytogenes]
gi|223698679|gb|ACN19026.1| internalin A [Listeria monocytogenes]
gi|223698685|gb|ACN19030.1| internalin A [Listeria monocytogenes]
gi|223698688|gb|ACN19032.1| internalin A [Listeria monocytogenes]
gi|223698709|gb|ACN19046.1| internalin A [Listeria monocytogenes]
gi|223698721|gb|ACN19054.1| internalin A [Listeria monocytogenes]
gi|223698724|gb|ACN19056.1| internalin A [Listeria monocytogenes]
gi|223698727|gb|ACN19058.1| internalin A [Listeria monocytogenes]
gi|223698730|gb|ACN19060.1| internalin A [Listeria monocytogenes]
gi|223698733|gb|ACN19062.1| internalin A [Listeria monocytogenes]
gi|223698742|gb|ACN19068.1| internalin A [Listeria monocytogenes]
gi|223698763|gb|ACN19082.1| internalin A [Listeria monocytogenes]
gi|223698790|gb|ACN19100.1| internalin A [Listeria monocytogenes]
gi|223698808|gb|ACN19112.1| internalin A [Listeria monocytogenes]
gi|223698811|gb|ACN19114.1| internalin A [Listeria monocytogenes]
gi|223698823|gb|ACN19122.1| internalin A [Listeria monocytogenes]
gi|223698853|gb|ACN19142.1| internalin A [Listeria monocytogenes]
gi|223698874|gb|ACN19156.1| internalin A [Listeria monocytogenes]
gi|223698889|gb|ACN19166.1| internalin A [Listeria monocytogenes]
gi|223698949|gb|ACN19206.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 118 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 170
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 171 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 228
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 229 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|112961679|gb|ABI28472.1| internalin A [Listeria monocytogenes]
gi|112961682|gb|ABI28474.1| internalin A [Listeria monocytogenes]
gi|112961685|gb|ABI28476.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|298360200|gb|ADI77679.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLSDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|228924426|ref|ZP_04087653.1| hypothetical protein bthur0011_53650 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835221|gb|EEM80635.1| hypothetical protein bthur0011_53650 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 1099
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 26/169 (15%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L + N+ +S L+QMK ++ LDLSS+ I D + + V + LR+L L+N + S+A
Sbjct: 294 LSLRNNKISNLSPLSQMKKIKILDLSSNAIKD--ITPLFTVTS-LRDLALANNQISNAN- 349
Query: 135 GILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
LAG L ++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 --LAGIEQLKKVKNLSLSNNGLTN--IEHITPMKKLVELDLSKNELE------------- 392
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ L L+ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 -NIEPLSRLSTVQSLNLEENYISDIT--PLSQLTGLYDLKLGSNEIRDV 438
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 198
L N+E LSL +I + +S +S M +K +D+S+ IK +T L
Sbjct: 286 AELENIESLSLRNNKISN--LSPLSQMKKIKILDLSSNAIK--------------DITPL 329
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+ L L L Q+S+A L + K++ +LSL N LT++ ++ + KL L +
Sbjct: 330 FTVTSLRDLALANNQISNANLAGIEQLKKVKNLSLSNNGLTNI--EHITPMKKLVELDLS 387
Query: 259 DAVLTN 264
L N
Sbjct: 388 KNELEN 393
>gi|219821387|gb|ACL37836.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112961622|gb|ABI28434.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112961790|gb|ABI28546.1| internalin A [Listeria monocytogenes]
Length = 693
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 99 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 151
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 152 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 209
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 210 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 262
>gi|112961619|gb|ABI28432.1| internalin A [Listeria monocytogenes]
gi|112961637|gb|ABI28444.1| internalin A [Listeria monocytogenes]
gi|112961655|gb|ABI28456.1| internalin A [Listeria monocytogenes]
gi|112961658|gb|ABI28458.1| internalin A [Listeria monocytogenes]
gi|112961766|gb|ABI28530.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112959446|gb|ABI27250.1| internalin A [Listeria monocytogenes]
gi|112959466|gb|ABI27260.1| internalin A [Listeria monocytogenes]
gi|112959470|gb|ABI27262.1| internalin A [Listeria monocytogenes]
gi|112959474|gb|ABI27264.1| internalin A [Listeria monocytogenes]
gi|112959476|gb|ABI27265.1| internalin A [Listeria monocytogenes]
gi|112959478|gb|ABI27266.1| internalin A [Listeria monocytogenes]
gi|112959484|gb|ABI27269.1| internalin A [Listeria monocytogenes]
gi|112959486|gb|ABI27270.1| internalin A [Listeria monocytogenes]
gi|112959492|gb|ABI27273.1| internalin A [Listeria monocytogenes]
gi|112959494|gb|ABI27274.1| internalin A [Listeria monocytogenes]
gi|112959504|gb|ABI27279.1| internalin A [Listeria monocytogenes]
gi|112959516|gb|ABI27285.1| internalin A [Listeria monocytogenes]
gi|112959532|gb|ABI27293.1| internalin A [Listeria monocytogenes]
gi|112959534|gb|ABI27294.1| internalin A [Listeria monocytogenes]
gi|112959540|gb|ABI27297.1| internalin A [Listeria monocytogenes]
gi|112959544|gb|ABI27299.1| internalin A [Listeria monocytogenes]
gi|112959550|gb|ABI27302.1| internalin A [Listeria monocytogenes]
gi|112959554|gb|ABI27304.1| internalin A [Listeria monocytogenes]
gi|112959558|gb|ABI27306.1| internalin A [Listeria monocytogenes]
gi|112959560|gb|ABI27307.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|29423714|gb|AAO73555.1| internalin A [Listeria monocytogenes]
Length = 743
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 146 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 198
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 199 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 256
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 257 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 309
>gi|22347570|gb|AAM95930.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 147 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 199
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 200 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 257
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 258 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|22347548|gb|AAM95919.1| internalin A precursor [Listeria monocytogenes]
gi|22347558|gb|AAM95924.1| internalin A precursor [Listeria monocytogenes]
gi|22347560|gb|AAM95925.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 147 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 199
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 200 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 257
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 258 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|298359924|gb|ADI77541.1| internalin A [Listeria monocytogenes]
gi|298359926|gb|ADI77542.1| internalin A [Listeria monocytogenes]
gi|298360172|gb|ADI77665.1| internalin A [Listeria monocytogenes]
gi|298360388|gb|ADI77773.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|289433887|ref|YP_003463759.1| peptidoglycan bound protein (LPXTG motif) [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289170131|emb|CBH26671.1| peptidoglycan bound protein (LPXTG motif) [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 593
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
V +T + ++L + + TQV+D +L L++ +L ++SL +S+T S+ L++L
Sbjct: 82 VSDITGIDYAHNLTSVRIANTQVTDFSL--LASLPKLTNISLAGSSITSSSIPNLNNLQN 139
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE-----------DAILQFCKMH 299
LT+LSI A L NS L +L L+L + LT+ +QFC +H
Sbjct: 140 LTSLSISPASLDNSVLTKINKIPNLTFLELDSNYSLTDIMPLQSLPNLVTLFVQFCGIH 198
>gi|219821255|gb|ACL37748.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|112961772|gb|ABI28534.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112961694|gb|ABI28482.1| internalin A [Listeria monocytogenes]
gi|112961706|gb|ABI28490.1| internalin A [Listeria monocytogenes]
gi|112961763|gb|ABI28528.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112961700|gb|ABI28486.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112959500|gb|ABI27277.1| internalin A [Listeria monocytogenes]
gi|112959502|gb|ABI27278.1| internalin A [Listeria monocytogenes]
gi|112959510|gb|ABI27282.1| internalin A [Listeria monocytogenes]
gi|112959512|gb|ABI27283.1| internalin A [Listeria monocytogenes]
gi|112959524|gb|ABI27289.1| internalin A [Listeria monocytogenes]
gi|112959530|gb|ABI27292.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 72 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 128
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 129 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 181
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 182 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 235
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 236 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 292
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 293 -PVSSLTKLQRL 303
>gi|223698871|gb|ACN19154.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 118 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 170
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 171 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 228
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 229 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821291|gb|ACL37772.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821261|gb|ACL37752.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112961616|gb|ABI28430.1| internalin A [Listeria monocytogenes]
gi|112961649|gb|ABI28452.1| internalin A [Listeria monocytogenes]
gi|112961652|gb|ABI28454.1| internalin A [Listeria monocytogenes]
gi|112961664|gb|ABI28462.1| internalin A [Listeria monocytogenes]
gi|112961691|gb|ABI28480.1| internalin A [Listeria monocytogenes]
gi|112961718|gb|ABI28498.1| internalin A [Listeria monocytogenes]
gi|112961727|gb|ABI28504.1| internalin A [Listeria monocytogenes]
gi|112961748|gb|ABI28518.1| internalin A [Listeria monocytogenes]
gi|112961751|gb|ABI28520.1| internalin A [Listeria monocytogenes]
gi|112961769|gb|ABI28532.1| internalin A [Listeria monocytogenes]
gi|112961775|gb|ABI28536.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112959518|gb|ABI27286.1| internalin A [Listeria monocytogenes]
gi|112959520|gb|ABI27287.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|149674|gb|AAA25289.1| internalin [Listeria monocytogenes]
gi|22347564|gb|AAM95927.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 147 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 199
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 200 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 257
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 258 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|85679230|gb|ABC72031.1| InlA [Listeria monocytogenes]
Length = 794
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 190
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 191 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 243
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 244 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 297
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 298 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 354
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 355 -PVSSLTKLQRL 365
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223006806|gb|ACM69360.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|254828935|ref|ZP_05233622.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|130774797|gb|ABO32413.1| InlA [Listeria monocytogenes]
gi|130774811|gb|ABO32418.1| InlA [Listeria monocytogenes]
gi|194239388|emb|CAQ76834.1| internalin A [Listeria monocytogenes]
gi|258601346|gb|EEW14671.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|298360424|gb|ADI77791.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|386042770|ref|YP_005961575.1| internalin A [Listeria monocytogenes 10403S]
gi|404409675|ref|YP_006695263.1| internalin A [Listeria monocytogenes SLCC5850]
gi|403399436|sp|G2K3G6.1|INLA_LISM4 RecName: Full=Internalin-A; Flags: Precursor
gi|150371722|dbj|BAF65676.1| internalin A [Listeria monocytogenes]
gi|150371786|dbj|BAF65682.1| internalin A [Listeria monocytogenes]
gi|150371800|dbj|BAF65689.1| internalin A [Listeria monocytogenes]
gi|150371810|dbj|BAF65694.1| internalin A [Listeria monocytogenes]
gi|150371812|dbj|BAF65695.1| internalin A [Listeria monocytogenes]
gi|150371816|dbj|BAF65697.1| internalin A [Listeria monocytogenes]
gi|150371826|dbj|BAF65702.1| internalin A [Listeria monocytogenes]
gi|150371840|dbj|BAF65709.1| internalin A [Listeria monocytogenes]
gi|150371842|dbj|BAF65710.1| internalin A [Listeria monocytogenes]
gi|150371862|dbj|BAF65720.1| internalin A [Listeria monocytogenes]
gi|150371866|dbj|BAF65722.1| internalin A [Listeria monocytogenes]
gi|167861902|gb|ACA05650.1| InlA [Listeria monocytogenes]
gi|167861984|gb|ACA05691.1| InlA [Listeria monocytogenes]
gi|167862000|gb|ACA05699.1| InlA [Listeria monocytogenes]
gi|167862006|gb|ACA05702.1| InlA [Listeria monocytogenes]
gi|194239412|emb|CAQ76846.1| internalin A [Listeria monocytogenes]
gi|223006784|gb|ACM69349.1| internalin A [Listeria monocytogenes]
gi|298359776|gb|ADI77467.1| internalin A [Listeria monocytogenes]
gi|298359804|gb|ADI77481.1| internalin A [Listeria monocytogenes]
gi|298359874|gb|ADI77516.1| internalin A [Listeria monocytogenes]
gi|298360072|gb|ADI77615.1| internalin A [Listeria monocytogenes]
gi|298360106|gb|ADI77632.1| internalin A [Listeria monocytogenes]
gi|298360118|gb|ADI77638.1| internalin A [Listeria monocytogenes]
gi|298360218|gb|ADI77688.1| internalin A [Listeria monocytogenes]
gi|298360262|gb|ADI77710.1| internalin A [Listeria monocytogenes]
gi|298360280|gb|ADI77719.1| internalin A [Listeria monocytogenes]
gi|298360386|gb|ADI77772.1| internalin A [Listeria monocytogenes]
gi|298360468|gb|ADI77813.1| internalin A [Listeria monocytogenes]
gi|298360570|gb|ADI77864.1| internalin A [Listeria monocytogenes]
gi|298360722|gb|ADI77940.1| internalin A [Listeria monocytogenes]
gi|302034307|gb|ADK92307.1| internalin A [Listeria monocytogenes]
gi|302034309|gb|ADK92308.1| internalin A [Listeria monocytogenes]
gi|302034311|gb|ADK92309.1| internalin A [Listeria monocytogenes]
gi|302034313|gb|ADK92310.1| internalin A [Listeria monocytogenes]
gi|302034319|gb|ADK92313.1| internalin A [Listeria monocytogenes]
gi|302034321|gb|ADK92314.1| internalin A [Listeria monocytogenes]
gi|302034323|gb|ADK92315.1| internalin A [Listeria monocytogenes]
gi|302034325|gb|ADK92316.1| internalin A [Listeria monocytogenes]
gi|345536004|gb|AEO05444.1| internalin A [Listeria monocytogenes 10403S]
gi|404229501|emb|CBY50905.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC5850]
gi|443428772|gb|AGC92185.1| internalin A [Listeria monocytogenes]
gi|443428780|gb|AGC92189.1| internalin A [Listeria monocytogenes]
gi|443428864|gb|AGC92231.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|19911058|dbj|BAB86898.1| phospholipase A2 inhibitor [Elaphe quadrivirgata]
Length = 332
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 19/225 (8%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ L+ LDLS++++ D E+ A NL L++S R + + L L IL L
Sbjct: 102 LPELQTLDLSTNLLEDLPPEIFANT-TNLIQLSISENRLAELRLSWFET-LKELTILGLD 159
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
Q+ + IS + L F+D+S+ + LS L++LERL LE
Sbjct: 160 NNQLKEIPISCFDKLKKLIFLDLSSNRLHR------------LSPDMFSGLDNLERLILE 207
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
+ +L +SLRN SLT++ L+ L L + D LT
Sbjct: 208 HNPIRCIAPKSFHGTPKLSIISLRNCSLTNIITGVFQPLNHLVLLDLSDNELTMLDPPVA 267
Query: 271 KPPRSLKLLDLHGG-WLLT--EDAILQFCKMHPRIEVWHELSVIC 312
P +L LDL G W D +L + K H +I+++ + ++C
Sbjct: 268 IPSANLS-LDLTGNPWACNCRMDNLLTWVKEH-KIDLYSKEEIVC 310
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 127 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 186
T+ SS GV L G LPNL+ L LS ++ +P L+ +D+S ++ ++
Sbjct: 65 TQVSSLGVEALQG-LPNLQELHLSNNRLKTLLSGLFRNLPELQTLDLSTNLLEDLPPEIF 123
Query: 187 AET-DLV-----------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
A T +L+ L L+ + L L L L+ Q+ + + K+LI L L
Sbjct: 124 ANTTNLIQLSISENRLAELRLSWFETLKELTILGLDNNQLKEIPISCFDKLKKLIFLDLS 183
Query: 235 NASLTDVSLHQLSSL------------------------SKLTNLSIRDAVLTNSGLGSF 270
+ L +S S L KL+ +S+R+ LTN G F
Sbjct: 184 SNRLHRLSPDMFSGLDNLERLILEHNPIRCIAPKSFHGTPKLSIISLRNCSLTNIITGVF 243
Query: 271 KPPRSLKLLDL 281
+P L LLDL
Sbjct: 244 QPLNHLVLLDL 254
>gi|371942140|gb|AEX60882.1| internaline [Listeria monocytogenes]
Length = 790
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485054|gb|ADR53001.1| InlA [Listeria monocytogenes]
Length = 771
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|224114089|ref|XP_002316664.1| f-box family protein [Populus trichocarpa]
gi|222859729|gb|EEE97276.1| f-box family protein [Populus trichocarpa]
Length = 579
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLE 145
F + LE L L + D+S+E +A N + L+L S FS+ G+ +A H NL
Sbjct: 105 FAAKYPFLEELRLKRMAVSDESLEFLALNFPNFKVLSLLSCDGFSTDGLAAIATHCKNLT 164
Query: 146 ILSLSGTQIDDYAISYMSMMP----SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ-- 199
L + IDD + +++S P SL+ ++ +N + + SL L+
Sbjct: 165 QLDVQENGIDDKSGNWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKAN 224
Query: 200 ---NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+L HL+RL + Q+++ L T + L+ R + S +QL +L+ L+ L
Sbjct: 225 KSISLEHLQRLLVCAPQLTE-----LGTGSFMPELTARQYAELGSSFNQLKNLNTLSGL 278
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 133
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 134 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 186
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 187 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 240
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 241 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 297
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 298 -PVSSLTKLQRL 308
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|130774813|gb|ABO32419.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112961646|gb|ABI28450.1| internalin A [Listeria monocytogenes]
gi|112961721|gb|ABI28500.1| internalin A [Listeria monocytogenes]
gi|112961757|gb|ABI28524.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|112959536|gb|ABI27295.1| internalin A [Listeria monocytogenes]
gi|112959546|gb|ABI27300.1| internalin A [Listeria monocytogenes]
Length = 734
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|22347572|gb|AAM95931.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 147 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 199
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 200 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 257
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 258 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|371942070|gb|AEX60847.1| internaline [Listeria monocytogenes]
Length = 789
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|328791860|ref|XP_397222.3| PREDICTED: c-Maf-inducing protein-like isoform 1 [Apis mellifera]
Length = 1028
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ +LE+L L+ + + E + + A LR+LNL T+F AG+ +++ HL L++L+L
Sbjct: 916 LGSLEYLSLAFTSVTSACAEQLIKLPA-LRHLNLWATQFGDAGLQMISEHLQKLQVLNLC 974
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDI 178
T + D IS ++ + SL+ +++++T +
Sbjct: 975 ETPVSDKGISTLASLTSLRKLNLNSTKL 1002
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L ++ +S++ C L ++ AL HL+L ++ GD ++M++ L+ LNL T
Sbjct: 919 LEYLSLAFTSVTSACAEQLIKLPALRHLNLWATQFGDAGLQMISEHLQKLQVLNLCETPV 978
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTD 177
S G+ LA L +L L+L+ T++ S +P+L+ D+ TD
Sbjct: 979 SDKGISTLAS-LTSLRKLNLNSTKLSVQTFESLKKCLPALQEFDVRYTD 1026
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 94 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 146
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 147 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 206
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 207 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 257
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 258 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 317
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 318 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 355
>gi|219821363|gb|ACL37820.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821333|gb|ACL37800.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|422808574|ref|ZP_16856985.1| Internalin A [Listeria monocytogenes FSL J1-208]
gi|378752188|gb|EHY62773.1| Internalin A [Listeria monocytogenes FSL J1-208]
Length = 802
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298359932|gb|ADI77545.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290978870|ref|XP_002672158.1| predicted protein [Naegleria gruberi]
gi|284085732|gb|EFC39414.1| predicted protein [Naegleria gruberi]
Length = 431
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG----------AE 188
G L L + + G I++ + +P L+++ + + +IKG + ++G ++
Sbjct: 122 GALKRLTLHGVHGRSIEEIDVH----LPKLEYLSVRHNNIKGELDRLGNLKNLTSLILSD 177
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
D+ L ++ L+ LNL + D+ L + L +L L ++ ++ + LSS
Sbjct: 178 NDIFDGGCYLSSITTLKYLNLSNNSIGDSFLMDFNKLINLTYLDLNGNNIGNIGANYLSS 237
Query: 249 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL---------------------- 286
+ L + ++ GL ++ R L++L+L+G +
Sbjct: 238 NINIEQLILSYNLIGEEGLKNYGTLRKLRILNLNGNNIRNGLKYLSACESLDRLSICANH 297
Query: 287 LTEDAILQFCKMHPRIEVWH 306
+ A+++FC++ +++ H
Sbjct: 298 INAQAVIEFCQLSSHVKILH 317
>gi|195433260|ref|XP_002064633.1| GK23724 [Drosophila willistoni]
gi|194160718|gb|EDW75619.1| GK23724 [Drosophila willistoni]
Length = 1189
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
SL LQN+NHLE L+L++ Q+ + L + EL L+L LT++ KL
Sbjct: 246 SLNQLQNMNHLEELHLDRNQLRELPLHFVGHLSELRLLNLSQNLLTELPRDIFEGALKLE 305
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 288
L + LT F RSL+LLDL WLL+
Sbjct: 306 RLYLSGNRLTVLPFQLFHTARSLQLLDLSENWLLS 340
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLD---LSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
L L +S + L+ C L Q++ + HL+ L + + + + V + + LR LNLS
Sbjct: 232 LKVLKMSGNRLAN-CSLNQLQNMNHLEELHLDRNQLRELPLHFVGHL-SELRLLNLSQNL 289
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI---------- 178
+ I G L LE L LSG ++ SL+ +D+S +
Sbjct: 290 LTELPRDIFEGAL-KLERLYLSGNRLTVLPFQLFHTARSLQLLDLSENWLLSFPDNFFSP 348
Query: 179 KGFIQQVGAETDLVLSL--TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
G ++Q+ + + + S+ +L NL+HL++L+L Q +S + L+ L++
Sbjct: 349 NGQLKQLHLQRNHLRSIGKHSLYNLHHLKQLDLSQNSLSQIDRKAFESLNHLLALNISGN 408
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
+LT +S L L L + G F+ RSL LL
Sbjct: 409 NLTGLSSIIFQPLPALKQLDLSRNQFKQLPSGLFQMQRSLVLL 451
>gi|150371726|dbj|BAF65678.1| internalin A [Listeria monocytogenes]
gi|194326151|emb|CAQ77234.1| internalin A [Listeria monocytogenes]
gi|298360180|gb|ADI77669.1| internalin A [Listeria monocytogenes]
gi|298360390|gb|ADI77774.1| internalin A [Listeria monocytogenes]
gi|298360416|gb|ADI77787.1| internalin A [Listeria monocytogenes]
gi|298360620|gb|ADI77889.1| internalin A [Listeria monocytogenes]
gi|298360656|gb|ADI77907.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112959438|gb|ABI27246.1| internalin A [Listeria monocytogenes]
gi|112959450|gb|ABI27252.1| internalin A [Listeria monocytogenes]
gi|112959456|gb|ABI27255.1| internalin A [Listeria monocytogenes]
gi|112959496|gb|ABI27275.1| internalin A [Listeria monocytogenes]
gi|112959498|gb|ABI27276.1| internalin A [Listeria monocytogenes]
gi|112959526|gb|ABI27290.1| internalin A [Listeria monocytogenes]
gi|112959528|gb|ABI27291.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|71912408|gb|AAZ53236.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698625|gb|ACN18990.1| internalin A [Listeria monocytogenes]
gi|223698736|gb|ACN19064.1| internalin A [Listeria monocytogenes]
gi|223698739|gb|ACN19066.1| internalin A [Listeria monocytogenes]
gi|223698847|gb|ACN19138.1| internalin A [Listeria monocytogenes]
gi|223698904|gb|ACN19176.1| internalin A [Listeria monocytogenes]
gi|223698955|gb|ACN19210.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 118 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 170
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 171 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 228
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 229 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112959468|gb|ABI27261.1| internalin A [Listeria monocytogenes]
Length = 730
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 133 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 185
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 186 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 243
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 244 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 296
>gi|112959552|gb|ABI27303.1| internalin A [Listeria monocytogenes]
gi|112959556|gb|ABI27305.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 303
>gi|219821375|gb|ACL37828.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 133
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 134 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 186
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 187 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 240
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 241 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 297
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 298 -PVSSLTKLQRL 308
>gi|219821300|gb|ACL37778.1| internalin A [Listeria monocytogenes]
gi|219821378|gb|ACL37830.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|313485044|gb|ADR52997.1| InlA [Listeria monocytogenes]
Length = 771
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698952|gb|ACN19208.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 118 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 170
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 171 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 228
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 229 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821276|gb|ACL37762.1| internalin A [Listeria monocytogenes]
gi|219821336|gb|ACL37802.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290992226|ref|XP_002678735.1| predicted protein [Naegleria gruberi]
gi|284092349|gb|EFC45991.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+L ++ L LD+ + IG+D + + + + L L + N + GV L+ L NL +
Sbjct: 189 YLRNLQKLTSLDIGYNQIGNDGAKFIGEIQS-LTELTIRNNNLKAEGVRWLS-KLKNLRL 246
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-----FIQQVGAETDLVLSLTALQN- 200
LS++ I D + ++ + L +D+ NT+I +Q+ T L +S+ +++
Sbjct: 247 LSINNNHIKDEGVVHICKLKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDG 306
Query: 201 ------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
+ L L ++ ++ L L K+L LS+ N +S + +L
Sbjct: 307 TKFLGEMKQLTTLEADEIELDAEGLKYLVGLKKLNFLSVNNNLFGAEGCKVVSEMKQLEE 366
Query: 255 LSIRDAVLTNSGLGSFKPPRSL 276
L + D + ++G+ +SL
Sbjct: 367 LCMNDNNIGDNGVQYLCELKSL 388
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 88 LTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
+ Q++ L+ L++SS +G D +++ + L L++S + G + G + L
Sbjct: 85 IAQLEQLKSLEISSDHKVGYDGAKVIGQL-KQLTKLDISFNTIGAEGAKFI-GEMQQLTY 142
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
L++ G + I ++S + +L ++++ N D + G + L+NL L
Sbjct: 143 LNIYGNSLTSEGIRFISQLTNLTYLNVRFNEDFR-----FGGHDKGLEGAQYLRNLQKLT 197
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L++ Q+ + + + L L++RN +L + LS L L LSI + + +
Sbjct: 198 SLDIGYNQIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDE 257
Query: 266 GLGSFKPPRSLKLLDLHGGW--LLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 323
G+ + L LDL W +T + I K P++ H +S+ D G
Sbjct: 258 GVVHICKLKQLTHLDL---WNTEITAEGIELVSKQLPKVTHLH-ISINVIRDGTKFLGEM 313
Query: 324 PSRTSLRA 331
T+L A
Sbjct: 314 KQLTTLEA 321
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 72 LSFLDVSNSSL-SRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L+FL V+N+ + C +++MK LE L ++ + IGD+ V+ + C +L +L L N
Sbjct: 340 LNFLSVNNNLFGAEGCKVVSEMKQLEELCMNDNNIGDNGVQYL-CELKSLTSLCLWNNNI 398
Query: 130 SSAGVGIL-AGHLPNLEILSLSGTQI---DDYAISYMSMMPSL 168
GV +L +G+L NL L + G QI D + M + L
Sbjct: 399 GIEGVKLLCSGNLNNLTTLDIRGNQITKSDSHLFENMKQLTEL 441
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 53/285 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNHI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821318|gb|ACL37790.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|254854324|ref|ZP_05243672.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|300766414|ref|ZP_07076370.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|404279991|ref|YP_006680889.1| internalin A [Listeria monocytogenes SLCC2755]
gi|404285805|ref|YP_006692391.1| internalin A [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405754532|ref|YP_006677996.1| internalin A [Listeria monocytogenes SLCC2540]
gi|130774761|gb|ABO32395.1| InlA [Listeria monocytogenes]
gi|130774765|gb|ABO32397.1| InlA [Listeria monocytogenes]
gi|130774775|gb|ABO32402.1| InlA [Listeria monocytogenes]
gi|150371872|dbj|BAF65725.1| internalin A [Listeria monocytogenes]
gi|150371878|dbj|BAF65728.1| internalin A [Listeria monocytogenes]
gi|150371880|dbj|BAF65729.1| internalin A [Listeria monocytogenes]
gi|150371882|dbj|BAF65730.1| internalin A [Listeria monocytogenes]
gi|150371884|dbj|BAF65731.1| internalin A [Listeria monocytogenes]
gi|150371886|dbj|BAF65732.1| internalin A [Listeria monocytogenes]
gi|167861936|gb|ACA05667.1| InlA [Listeria monocytogenes]
gi|167861950|gb|ACA05674.1| InlA [Listeria monocytogenes]
gi|167861974|gb|ACA05686.1| InlA [Listeria monocytogenes]
gi|167861990|gb|ACA05694.1| InlA [Listeria monocytogenes]
gi|194239386|emb|CAQ76833.1| internalin A [Listeria monocytogenes]
gi|194239390|emb|CAQ76835.1| internalin A [Listeria monocytogenes]
gi|194239398|emb|CAQ76839.1| internalin A [Listeria monocytogenes]
gi|194326159|emb|CAQ77238.1| internalin A [Listeria monocytogenes]
gi|223006782|gb|ACM69348.1| internalin A [Listeria monocytogenes]
gi|258607720|gb|EEW20328.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|290350822|dbj|BAI78332.1| internalin A [Listeria monocytogenes]
gi|290350824|dbj|BAI78333.1| internalin A [Listeria monocytogenes]
gi|298359734|gb|ADI77446.1| internalin A [Listeria monocytogenes]
gi|298359740|gb|ADI77449.1| internalin A [Listeria monocytogenes]
gi|298359774|gb|ADI77466.1| internalin A [Listeria monocytogenes]
gi|298359822|gb|ADI77490.1| internalin A [Listeria monocytogenes]
gi|298359826|gb|ADI77492.1| internalin A [Listeria monocytogenes]
gi|298359830|gb|ADI77494.1| internalin A [Listeria monocytogenes]
gi|298359834|gb|ADI77496.1| internalin A [Listeria monocytogenes]
gi|298359836|gb|ADI77497.1| internalin A [Listeria monocytogenes]
gi|298359846|gb|ADI77502.1| internalin A [Listeria monocytogenes]
gi|298359848|gb|ADI77503.1| internalin A [Listeria monocytogenes]
gi|298359854|gb|ADI77506.1| internalin A [Listeria monocytogenes]
gi|298359856|gb|ADI77507.1| internalin A [Listeria monocytogenes]
gi|298359868|gb|ADI77513.1| internalin A [Listeria monocytogenes]
gi|298359870|gb|ADI77514.1| internalin A [Listeria monocytogenes]
gi|298359888|gb|ADI77523.1| internalin A [Listeria monocytogenes]
gi|298359920|gb|ADI77539.1| internalin A [Listeria monocytogenes]
gi|298359954|gb|ADI77556.1| internalin A [Listeria monocytogenes]
gi|298359968|gb|ADI77563.1| internalin A [Listeria monocytogenes]
gi|298359972|gb|ADI77565.1| internalin A [Listeria monocytogenes]
gi|298359984|gb|ADI77571.1| internalin A [Listeria monocytogenes]
gi|298359998|gb|ADI77578.1| internalin A [Listeria monocytogenes]
gi|298360002|gb|ADI77580.1| internalin A [Listeria monocytogenes]
gi|298360006|gb|ADI77582.1| internalin A [Listeria monocytogenes]
gi|298360040|gb|ADI77599.1| internalin A [Listeria monocytogenes]
gi|298360042|gb|ADI77600.1| internalin A [Listeria monocytogenes]
gi|298360044|gb|ADI77601.1| internalin A [Listeria monocytogenes]
gi|298360050|gb|ADI77604.1| internalin A [Listeria monocytogenes]
gi|298360080|gb|ADI77619.1| internalin A [Listeria monocytogenes]
gi|298360090|gb|ADI77624.1| internalin A [Listeria monocytogenes]
gi|298360100|gb|ADI77629.1| internalin A [Listeria monocytogenes]
gi|298360126|gb|ADI77642.1| internalin A [Listeria monocytogenes]
gi|298360150|gb|ADI77654.1| internalin A [Listeria monocytogenes]
gi|298360156|gb|ADI77657.1| internalin A [Listeria monocytogenes]
gi|298360166|gb|ADI77662.1| internalin A [Listeria monocytogenes]
gi|298360188|gb|ADI77673.1| internalin A [Listeria monocytogenes]
gi|298360190|gb|ADI77674.1| internalin A [Listeria monocytogenes]
gi|298360194|gb|ADI77676.1| internalin A [Listeria monocytogenes]
gi|298360220|gb|ADI77689.1| internalin A [Listeria monocytogenes]
gi|298360222|gb|ADI77690.1| internalin A [Listeria monocytogenes]
gi|298360238|gb|ADI77698.1| internalin A [Listeria monocytogenes]
gi|298360246|gb|ADI77702.1| internalin A [Listeria monocytogenes]
gi|298360260|gb|ADI77709.1| internalin A [Listeria monocytogenes]
gi|298360264|gb|ADI77711.1| internalin A [Listeria monocytogenes]
gi|298360266|gb|ADI77712.1| internalin A [Listeria monocytogenes]
gi|298360294|gb|ADI77726.1| internalin A [Listeria monocytogenes]
gi|298360298|gb|ADI77728.1| internalin A [Listeria monocytogenes]
gi|298360312|gb|ADI77735.1| internalin A [Listeria monocytogenes]
gi|298360318|gb|ADI77738.1| internalin A [Listeria monocytogenes]
gi|298360356|gb|ADI77757.1| internalin A [Listeria monocytogenes]
gi|298360368|gb|ADI77763.1| internalin A [Listeria monocytogenes]
gi|298360396|gb|ADI77777.1| internalin A [Listeria monocytogenes]
gi|298360398|gb|ADI77778.1| internalin A [Listeria monocytogenes]
gi|298360400|gb|ADI77779.1| internalin A [Listeria monocytogenes]
gi|298360428|gb|ADI77793.1| internalin A [Listeria monocytogenes]
gi|298360434|gb|ADI77796.1| internalin A [Listeria monocytogenes]
gi|298360448|gb|ADI77803.1| internalin A [Listeria monocytogenes]
gi|298360462|gb|ADI77810.1| internalin A [Listeria monocytogenes]
gi|298360498|gb|ADI77828.1| internalin A [Listeria monocytogenes]
gi|298360502|gb|ADI77830.1| internalin A [Listeria monocytogenes]
gi|298360510|gb|ADI77834.1| internalin A [Listeria monocytogenes]
gi|298360514|gb|ADI77836.1| internalin A [Listeria monocytogenes]
gi|298360558|gb|ADI77858.1| internalin A [Listeria monocytogenes]
gi|298360560|gb|ADI77859.1| internalin A [Listeria monocytogenes]
gi|298360566|gb|ADI77862.1| internalin A [Listeria monocytogenes]
gi|298360586|gb|ADI77872.1| internalin A [Listeria monocytogenes]
gi|298360614|gb|ADI77886.1| internalin A [Listeria monocytogenes]
gi|298360630|gb|ADI77894.1| internalin A [Listeria monocytogenes]
gi|298360638|gb|ADI77898.1| internalin A [Listeria monocytogenes]
gi|298360652|gb|ADI77905.1| internalin A [Listeria monocytogenes]
gi|298360680|gb|ADI77919.1| internalin A [Listeria monocytogenes]
gi|298360682|gb|ADI77920.1| internalin A [Listeria monocytogenes]
gi|298360694|gb|ADI77926.1| internalin A [Listeria monocytogenes]
gi|298360704|gb|ADI77931.1| internalin A [Listeria monocytogenes]
gi|298360706|gb|ADI77932.1| internalin A [Listeria monocytogenes]
gi|300512880|gb|EFK39971.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|302034315|gb|ADK92311.1| internalin A [Listeria monocytogenes]
gi|302034317|gb|ADK92312.1| internalin A [Listeria monocytogenes]
gi|404223732|emb|CBY75094.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2540]
gi|404226626|emb|CBY48031.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244734|emb|CBY02959.1| internalin A (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360360|gb|ADI77759.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|150371858|dbj|BAF65718.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+++L L L N I + L+ +N L ++ L+ T + I LSF
Sbjct: 135 ITPLANLTNLTGLTLFNNQI-TDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSF 193
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
+ ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 194 ----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 246
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I + + +L +D++N I G T+L
Sbjct: 247 LGILT----NLDELSLNGNQLKD--IGTLGSLTNLTDLDLANNQISNLAPLSGLTKLTEL 300
Query: 192 VL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 301 KLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--P 356
Query: 246 LSSLSKLTNL 255
+SSL+KL L
Sbjct: 357 VSSLTKLQRL 366
>gi|130774759|gb|ABO32394.1| InlA [Listeria monocytogenes]
gi|298360132|gb|ADI77645.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942068|gb|AEX60846.1| internaline [Listeria monocytogenes]
gi|371942088|gb|AEX60856.1| internaline [Listeria monocytogenes]
gi|371942106|gb|AEX60865.1| internaline [Listeria monocytogenes]
gi|371942134|gb|AEX60879.1| internaline [Listeria monocytogenes]
Length = 790
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|313485052|gb|ADR53000.1| InlA [Listeria monocytogenes]
Length = 771
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821396|gb|ACL37842.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821366|gb|ACL37822.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|130774815|gb|ABO32420.1| InlA [Listeria monocytogenes]
gi|194239404|emb|CAQ76842.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112961697|gb|ABI28484.1| internalin A [Listeria monocytogenes]
gi|112961709|gb|ABI28492.1| internalin A [Listeria monocytogenes]
gi|112961730|gb|ABI28506.1| internalin A [Listeria monocytogenes]
gi|112961760|gb|ABI28526.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|85679218|gb|ABC72025.1| InlA [Listeria monocytogenes]
gi|85679232|gb|ABC72032.1| InlA [Listeria monocytogenes]
Length = 794
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 202 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 254
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 255 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 312
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 313 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 365
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942090|gb|AEX60857.1| internaline [Listeria monocytogenes]
Length = 790
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|322952088|gb|ADX21043.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485056|gb|ADR53002.1| InlA [Listeria monocytogenes]
Length = 789
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290892407|ref|ZP_06555401.1| InlA protein [Listeria monocytogenes FSL J2-071]
gi|290557973|gb|EFD91493.1| InlA protein [Listeria monocytogenes FSL J2-071]
Length = 796
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 206 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 258
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 259 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 316
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 317 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 369
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN---- 200
LSL+G Q+ D I ++ + +L +D++N I G T+L L + N
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPI 255
Query: 201 --LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|47092503|ref|ZP_00230292.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|417314487|ref|ZP_12101186.1| internalin A [Listeria monocytogenes J1816]
gi|47019095|gb|EAL09839.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|130774783|gb|ABO32406.1| InlA [Listeria monocytogenes]
gi|130774787|gb|ABO32408.1| InlA [Listeria monocytogenes]
gi|167861878|gb|ACA05638.1| InlA [Listeria monocytogenes]
gi|167861926|gb|ACA05662.1| InlA [Listeria monocytogenes]
gi|194239406|emb|CAQ76843.1| internalin A [Listeria monocytogenes]
gi|223006800|gb|ACM69357.1| internalin A [Listeria monocytogenes]
gi|223006808|gb|ACM69361.1| internalin A [Listeria monocytogenes]
gi|294358399|gb|ADE73852.1| InlA [Listeria monocytogenes]
gi|298359958|gb|ADI77558.1| internalin A [Listeria monocytogenes]
gi|298359988|gb|ADI77573.1| internalin A [Listeria monocytogenes]
gi|298360010|gb|ADI77584.1| internalin A [Listeria monocytogenes]
gi|298360208|gb|ADI77683.1| internalin A [Listeria monocytogenes]
gi|298360370|gb|ADI77764.1| internalin A [Listeria monocytogenes]
gi|298360402|gb|ADI77780.1| internalin A [Listeria monocytogenes]
gi|298360472|gb|ADI77815.1| internalin A [Listeria monocytogenes]
gi|298360544|gb|ADI77851.1| internalin A [Listeria monocytogenes]
gi|298360592|gb|ADI77875.1| internalin A [Listeria monocytogenes]
gi|328467733|gb|EGF38785.1| internalin A [Listeria monocytogenes J1816]
gi|443428820|gb|AGC92209.1| truncated internalin A [Listeria monocytogenes]
gi|443428844|gb|AGC92221.1| truncated internalin A [Listeria monocytogenes]
gi|443428846|gb|AGC92222.1| truncated internalin A [Listeria monocytogenes]
gi|443428850|gb|AGC92224.1| truncated internalin A [Listeria monocytogenes]
gi|443428854|gb|AGC92226.1| truncated internalin A [Listeria monocytogenes]
gi|443428856|gb|AGC92227.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|322952085|gb|ADX21042.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821342|gb|ACL37806.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 TGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|260834861|ref|XP_002612428.1| hypothetical protein BRAFLDRAFT_214255 [Branchiostoma floridae]
gi|229297805|gb|EEN68437.1| hypothetical protein BRAFLDRAFT_214255 [Branchiostoma floridae]
Length = 491
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ + L+ L L S+ IG S + + + LR L L N + G G +EIL
Sbjct: 127 FSGLGKLDRLYLDSNRIGYVSSKAFRNLDS-LRELTLKNNLITVV-PGQAIGLAKTIEIL 184
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLS------LTALQ 199
L+G ++ +S + P++ +D++N K + + T+L +S + L+
Sbjct: 185 RLAGNPLNMSDLSSLRAAPTILELDLANIGRLSKRALLPLENLTNLNISNCSLARVPILR 244
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
+L ++ L+L ++ ST +L HL L N +L+ + + + LS L +LS+ +
Sbjct: 245 HLGTMQVLDLSWNNITTLPPEAFSTMTDLTHLRLSNINLSSIEPNAFAGLSSLQHLSLEN 304
Query: 260 AVLTNSGLGSFKPPRSLKLLDLHGG-WLLTEDAILQFCKMH--PRIEVWHELSVIC 312
L F P RSL+LLDL+ W C++H R+ + S+ C
Sbjct: 305 NQLKTLPRNLFMPLRSLELLDLYNNPWSCD-------CRLHWLIRVRIHSTCSMTC 353
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942132|gb|AEX60878.1| internaline [Listeria monocytogenes]
Length = 790
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|427783809|gb|JAA57356.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 730
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 42/61 (68%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
+LR LNL +T+F +G+ +++ HLP L++L+L T + D +S + M SL+ +++++T
Sbjct: 644 SLRYLNLWSTQFGDSGLKLISEHLPKLQVLNLCETPVTDKGLSSLESMKSLRKLNLNSTS 703
Query: 178 I 178
+
Sbjct: 704 L 704
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 197
G NLE LSL+ TQ+ ++ +PSL+++++ +T Q G D L L +
Sbjct: 615 CGSFGNLECLSLAFTQVTSACAEHLIKLPSLRYLNLWST-------QFG---DSGLKLIS 664
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
++L L+ LNL +T V+D L L + K L L+L + SL+ + L KL L
Sbjct: 665 -EHLPKLQVLNLCETPVTDKGLSSLESMKSLRKLNLNSTSLSAQTFECLK--EKLPALQE 721
Query: 258 RDAVLTNS 265
D T++
Sbjct: 722 CDVRYTDA 729
>gi|371942142|gb|AEX60883.1| internaline [Listeria monocytogenes]
Length = 790
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|313485079|gb|ADR53010.1| InlA [Listeria monocytogenes]
Length = 800
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|130774755|gb|ABO32392.1| InlA [Listeria monocytogenes]
gi|130774767|gb|ABO32398.1| InlA [Listeria monocytogenes]
gi|298359732|gb|ADI77445.1| internalin A [Listeria monocytogenes]
gi|298360004|gb|ADI77581.1| internalin A [Listeria monocytogenes]
gi|298360478|gb|ADI77818.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|423626307|ref|ZP_17602084.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401252861|gb|EJR59112.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
Length = 943
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 17/134 (12%)
Query: 129 FSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQ 184
+S G+ +AG H+ NLE L+L G+ + D IS +S + LK++D+++ IK I+Q
Sbjct: 226 YSGEGINEIAGLEHMTNLEKLTLRGSNVTD--ISAISKLRDLKYVDLTSNPIKNIHPIEQ 283
Query: 185 VGAETDLVL------SLTALQNLNHLERLNLEQTQVSDAT-LFPLSTFKELIHLSLRNAS 237
+ L L LT L + ++ L+L + D LF LST K+L L N
Sbjct: 284 LENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLY---LANNQ 340
Query: 238 LTDVS-LHQLSSLS 250
++D++ ++QLS++
Sbjct: 341 ISDLTGINQLSNVE 354
>gi|371942084|gb|AEX60854.1| internaline [Listeria monocytogenes]
Length = 790
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942074|gb|AEX60849.1| internaline [Listeria monocytogenes]
gi|371942102|gb|AEX60863.1| internaline [Listeria monocytogenes]
gi|371942114|gb|AEX60869.1| internaline [Listeria monocytogenes]
gi|371942124|gb|AEX60874.1| internaline [Listeria monocytogenes]
Length = 790
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|322952090|gb|ADX21044.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|219821351|gb|ACL37812.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|56797877|emb|CAH04900.1| internalin A [Listeria monocytogenes]
Length = 792
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 195 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 247
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 248 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 305
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 306 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 358
>gi|47096525|ref|ZP_00234116.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|254913501|ref|ZP_05263513.1| internalin E [Listeria monocytogenes J2818]
gi|254937918|ref|ZP_05269615.1| internalin E [Listeria monocytogenes F6900]
gi|386045908|ref|YP_005964240.1| internalin E [Listeria monocytogenes J0161]
gi|47015116|gb|EAL06058.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|258610527|gb|EEW23135.1| internalin E [Listeria monocytogenes F6900]
gi|293591509|gb|EFF99843.1| internalin E [Listeria monocytogenes J2818]
gi|345532899|gb|AEO02340.1| internalin E [Listeria monocytogenes J0161]
Length = 499
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L+LS + + D S
Sbjct: 84 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELELSGNPLKDVS---- 134
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 135 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 189
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 190 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 233
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 234 YLEENQISDV-----SPLAKLPNLSI--VTLTN 259
>gi|374375628|ref|ZP_09633286.1| hypothetical protein NiasoDRAFT_1039 [Niabella soli DSM 19437]
gi|373232468|gb|EHP52263.1| hypothetical protein NiasoDRAFT_1039 [Niabella soli DSM 19437]
Length = 468
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L L+ + ++D +L ++ L LSL N ++TD + QLS+L +L L++ +T G
Sbjct: 349 LKLDNSNITDESLKTIAALANLTRLSLSNTAITDAGMAQLSTLKQLQVLNLVGTKITQQG 408
Query: 267 LGSFKPPRSLKLLDLH 282
LGS K ++L+ L L+
Sbjct: 409 LGSLKGLKTLRELYLY 424
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 92 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 151
K + L L +S I D+S++ +A + ANL L+LSNT + AG+ L+ L L++L+L G
Sbjct: 344 KQVVWLKLDNSNITDESLKTIAAL-ANLTRLSLSNTAITDAGMAQLS-TLKQLQVLNLVG 401
Query: 152 TQIDDYAISYMSMMPSLKFIDISNTDI 178
T+I + + + +L+ + + T +
Sbjct: 402 TKITQQGLGSLKGLKTLRELYLYKTAV 428
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
SL + L +L RL+L T ++DA + LST K+L L+L +T L L L L
Sbjct: 360 SLKTIAALANLTRLSLSNTAITDAGMAQLSTLKQLQVLNLVGTKITQQGLGSLKGLKTLR 419
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 287
L + + + K LLD GG+++
Sbjct: 420 ELYLYKTAVNKNNWAQLKQAFPKVLLD-SGGYIV 452
>gi|371942138|gb|AEX60881.1| internaline [Listeria monocytogenes]
Length = 789
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|71912406|gb|AAZ53235.1| InlA [Listeria monocytogenes]
Length = 800
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTSLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 133
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 134 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 186
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 187 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 240
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 241 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 297
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 298 -PVSSLTKLQRL 308
>gi|85679238|gb|ABC72035.1| InlA [Listeria monocytogenes]
Length = 791
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 202 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 254
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 255 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 312
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 313 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 365
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|112961640|gb|ABI28446.1| truncated internalin A [Listeria monocytogenes]
gi|112961643|gb|ABI28448.1| truncated internalin A [Listeria monocytogenes]
gi|112961661|gb|ABI28460.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 154 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 206
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 207 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 264
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 265 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 317
>gi|194239378|emb|CAQ76829.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L ++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNKISDIS--PVSSLTKLQRL 366
>gi|85679236|gb|ABC72034.1| InlA [Listeria monocytogenes]
Length = 794
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 190
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 191 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 243
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 244 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 297
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 298 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 354
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 355 -PVSSLTKLQRL 365
>gi|328698260|ref|XP_001948969.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Acyrthosiphon pisum]
Length = 537
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 25/181 (13%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L+ L+LSN + L HL LEIL LS +I D I + + L+ + + +I
Sbjct: 165 LKTLDLSNNKIRDIEPKSLT-HLTELEILILSNNKISDVKIGVFTNLSKLRLLYLDLNEI 223
Query: 179 KGFIQQVGAETDLVLSLTALQNL----NHLERLN--------------LEQTQVSDATLF 220
+ ET + +LT+L+NL N++ +L+ L ++ D
Sbjct: 224 ENI------ETGVFNNLTSLENLYLNFNNIHKLDSEMFIGLTKLNTLYLSYNKIRDIVPK 277
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 280
LS EL LSL N ++DV + ++LS L LS+ + + N G F SL+ L
Sbjct: 278 LLSNLTELKVLSLSNNKISDVKIGAFTNLSNLRTLSLNENKIENLETGVFNNLTSLENLY 337
Query: 281 L 281
L
Sbjct: 338 L 338
>gi|313485046|gb|ADR52998.1| InlA [Listeria monocytogenes]
Length = 774
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|388455805|ref|ZP_10138100.1| hypothetical protein FdumT_04498 [Fluoribacter dumoffii Tex-KL]
Length = 398
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L + K L HL L S IG + L++L L N + G+ L + ++ +
Sbjct: 164 LAKNKTLIHLSLRKSQIGAAGARAL-FANETLKSLYLGNNHLGNEGIKFLENN-HSINFI 221
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT----------- 196
L ID I + P+L ++++ I + A+ +V L+
Sbjct: 222 DLENNNIDQDGIPTIVRKPNLFYLNLDKNPIHNAGAALLAQASMVRWLSIADCRVGIEGA 281
Query: 197 -ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
AL L+HL LN+++ + D + L+ + L +L N S+ D L++ +L NL
Sbjct: 282 QALAALHHLAMLNIDKNFIGDEGIIALAKMRSLNNLYANNNSIGDEGAKNLANAIQLQNL 341
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDL 281
S+ + + G + +L LD+
Sbjct: 342 SLNHNQIGDEGALALAETATLYALDV 367
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 67 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 119
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDI 179
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 180 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 230
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 231 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 290
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 291 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 328
>gi|358336464|dbj|GAA54963.1| acidic leucine-rich nuclear phosphoprotein 32-related protein
[Clonorchis sinensis]
Length = 572
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+ ++ L LS+++ S + L+ NLE+L+L ++D +S + +PSLK +D+SN
Sbjct: 20 SEIKELTLSHSK--STVIEGLSDEFTNLEVLNLVSVGLED--LSGLPKLPSLKILDLSNN 75
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS--DATLFPLSTFKELIHLSLR 234
I G L AL N +LE LNL +V+ DA L PL+ L + L
Sbjct: 76 AISG-------------GLEALLNCPNLETLNLSANKVATIDA-LLPLAKLSCLSSIDLF 121
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAV 261
N +T + ++ + + L NL D +
Sbjct: 122 NCEVTGLENYRKTVFAALPNLKYLDGL 148
>gi|112959440|gb|ABI27247.1| truncated internalin A [Listeria monocytogenes]
gi|112959442|gb|ABI27248.1| truncated internalin A [Listeria monocytogenes]
gi|112959448|gb|ABI27251.1| truncated internalin A [Listeria monocytogenes]
gi|112959454|gb|ABI27254.1| truncated internalin A [Listeria monocytogenes]
gi|112959458|gb|ABI27256.1| truncated internalin A [Listeria monocytogenes]
gi|112959460|gb|ABI27257.1| truncated internalin A [Listeria monocytogenes]
gi|112959462|gb|ABI27258.1| truncated internalin A [Listeria monocytogenes]
gi|112959472|gb|ABI27263.1| truncated internalin A [Listeria monocytogenes]
gi|112959480|gb|ABI27267.1| truncated internalin A [Listeria monocytogenes]
gi|112959482|gb|ABI27268.1| truncated internalin A [Listeria monocytogenes]
gi|112959488|gb|ABI27271.1| truncated internalin A [Listeria monocytogenes]
gi|112959514|gb|ABI27284.1| truncated internalin A [Listeria monocytogenes]
gi|112959538|gb|ABI27296.1| truncated internalin A [Listeria monocytogenes]
gi|112959542|gb|ABI27298.1| truncated internalin A [Listeria monocytogenes]
gi|112959548|gb|ABI27301.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 140 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 193 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 250
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 251 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 300
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|219821390|gb|ACL37838.1| internalin A [Listeria monocytogenes]
Length = 744
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|22347566|gb|AAM95928.1| internalin A precursor [Listeria monocytogenes]
Length = 746
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 135
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 136 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 188
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 189 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 242
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 243 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 299
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 300 -PVSSLTKLQRL 310
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 102 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 154
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 155 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 214
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 215 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 265
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 325
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 326 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|219821258|gb|ACL37750.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|126331469|ref|XP_001375790.1| PREDICTED: toll-like receptor 2-like [Monodelphis domestica]
Length = 785
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSS-AGVGILAGHLPNLEIL 147
+K+LE+ DLS S++ + ++E AC GA +L LNLS +F S +G L + NL L
Sbjct: 359 LKSLEYFDLSDSLMSEGALENSACEGAWPSLHTLNLSQNKFESLKTMGELLLTVKNLTHL 418
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ------NL 201
+S +D S LK+++IS+T + +T +L ++ Q NL
Sbjct: 419 DISKNNLDSMPDS-CQWPGKLKYLNISSTKTYT-VTSCIPQTLEILDISNNQLSDFNLNL 476
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
HL+ L L + ++ TL + F L+ +++ +L S QL S
Sbjct: 477 PHLKELYLSKNKLK--TLPDAAHFPHLVVMNISQNTLYTFSKAQLESF 522
>gi|239504888|ref|NP_001155122.1| toll-like receptor 2 type-2 precursor [Gallus gallus]
gi|237871859|gb|ACR26372.1| TLR2B [Gallus lafayetii]
gi|237871861|gb|ACR26373.1| TLR2B [Gallus lafayetii]
gi|237871863|gb|ACR26374.1| TLR2B [Gallus lafayetii]
gi|237871865|gb|ACR26375.1| TLR2B [Gallus lafayetii]
gi|237871905|gb|ACR26395.1| TLR2B [Gallus sonneratii]
gi|237871943|gb|ACR26414.1| TLR2B [Gallus gallus]
gi|237871945|gb|ACR26415.1| TLR2B [Gallus gallus]
Length = 732
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 86 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 141
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 142 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
NL +L +S + I + P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDVCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 201 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 259 DAVLTNSGLGSFKPPRSL 276
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
>gi|298359724|gb|ADI77441.1| truncated internalin A [Listeria monocytogenes]
gi|298359728|gb|ADI77443.1| truncated internalin A [Listeria monocytogenes]
gi|298359760|gb|ADI77459.1| truncated internalin A [Listeria monocytogenes]
gi|298359768|gb|ADI77463.1| truncated internalin A [Listeria monocytogenes]
gi|298359778|gb|ADI77468.1| truncated internalin A [Listeria monocytogenes]
gi|298359784|gb|ADI77471.1| truncated internalin A [Listeria monocytogenes]
gi|298359796|gb|ADI77477.1| truncated internalin A [Listeria monocytogenes]
gi|298359800|gb|ADI77479.1| truncated internalin A [Listeria monocytogenes]
gi|298359816|gb|ADI77487.1| truncated internalin A [Listeria monocytogenes]
gi|298359840|gb|ADI77499.1| truncated internalin A [Listeria monocytogenes]
gi|298359850|gb|ADI77504.1| truncated internalin A [Listeria monocytogenes]
gi|298359852|gb|ADI77505.1| truncated internalin A [Listeria monocytogenes]
gi|298359860|gb|ADI77509.1| truncated internalin A [Listeria monocytogenes]
gi|298359916|gb|ADI77537.1| truncated internalin A [Listeria monocytogenes]
gi|298359928|gb|ADI77543.1| truncated internalin A [Listeria monocytogenes]
gi|298359936|gb|ADI77547.1| truncated internalin A [Listeria monocytogenes]
gi|298359962|gb|ADI77560.1| truncated internalin A [Listeria monocytogenes]
gi|298359996|gb|ADI77577.1| truncated internalin A [Listeria monocytogenes]
gi|298360016|gb|ADI77587.1| truncated internalin A [Listeria monocytogenes]
gi|298360018|gb|ADI77588.1| truncated internalin A [Listeria monocytogenes]
gi|298360022|gb|ADI77590.1| truncated internalin A [Listeria monocytogenes]
gi|298360024|gb|ADI77591.1| truncated internalin A [Listeria monocytogenes]
gi|298360046|gb|ADI77602.1| truncated internalin A [Listeria monocytogenes]
gi|298360048|gb|ADI77603.1| truncated internalin A [Listeria monocytogenes]
gi|298360058|gb|ADI77608.1| truncated internalin A [Listeria monocytogenes]
gi|298360062|gb|ADI77610.1| truncated internalin A [Listeria monocytogenes]
gi|298360088|gb|ADI77623.1| truncated internalin A [Listeria monocytogenes]
gi|298360120|gb|ADI77639.1| truncated internalin A [Listeria monocytogenes]
gi|298360152|gb|ADI77655.1| truncated internalin A [Listeria monocytogenes]
gi|298360168|gb|ADI77663.1| truncated internalin A [Listeria monocytogenes]
gi|298360204|gb|ADI77681.1| truncated internalin A [Listeria monocytogenes]
gi|298360210|gb|ADI77684.1| truncated internalin A [Listeria monocytogenes]
gi|298360224|gb|ADI77691.1| truncated internalin A [Listeria monocytogenes]
gi|298360248|gb|ADI77703.1| truncated internalin A [Listeria monocytogenes]
gi|298360250|gb|ADI77704.1| truncated internalin A [Listeria monocytogenes]
gi|298360272|gb|ADI77715.1| truncated internalin A [Listeria monocytogenes]
gi|298360308|gb|ADI77733.1| truncated internalin A [Listeria monocytogenes]
gi|298360340|gb|ADI77749.1| truncated internalin A [Listeria monocytogenes]
gi|298360382|gb|ADI77770.1| truncated internalin A [Listeria monocytogenes]
gi|298360392|gb|ADI77775.1| truncated internalin A [Listeria monocytogenes]
gi|298360408|gb|ADI77783.1| truncated internalin A [Listeria monocytogenes]
gi|298360418|gb|ADI77788.1| truncated internalin A [Listeria monocytogenes]
gi|298360430|gb|ADI77794.1| truncated internalin A [Listeria monocytogenes]
gi|298360438|gb|ADI77798.1| truncated internalin A [Listeria monocytogenes]
gi|298360444|gb|ADI77801.1| truncated internalin A [Listeria monocytogenes]
gi|298360446|gb|ADI77802.1| truncated internalin A [Listeria monocytogenes]
gi|298360476|gb|ADI77817.1| truncated internalin A [Listeria monocytogenes]
gi|298360482|gb|ADI77820.1| truncated internalin A [Listeria monocytogenes]
gi|298360484|gb|ADI77821.1| truncated internalin A [Listeria monocytogenes]
gi|298360486|gb|ADI77822.1| truncated internalin A [Listeria monocytogenes]
gi|298360490|gb|ADI77824.1| truncated internalin A [Listeria monocytogenes]
gi|298360512|gb|ADI77835.1| truncated internalin A [Listeria monocytogenes]
gi|298360526|gb|ADI77842.1| truncated internalin A [Listeria monocytogenes]
gi|298360534|gb|ADI77846.1| truncated internalin A [Listeria monocytogenes]
gi|298360574|gb|ADI77866.1| truncated internalin A [Listeria monocytogenes]
gi|298360584|gb|ADI77871.1| truncated internalin A [Listeria monocytogenes]
gi|298360618|gb|ADI77888.1| truncated internalin A [Listeria monocytogenes]
gi|298360622|gb|ADI77890.1| truncated internalin A [Listeria monocytogenes]
gi|298360626|gb|ADI77892.1| truncated internalin A [Listeria monocytogenes]
gi|298360628|gb|ADI77893.1| truncated internalin A [Listeria monocytogenes]
gi|298360646|gb|ADI77902.1| truncated internalin A [Listeria monocytogenes]
gi|298360650|gb|ADI77904.1| truncated internalin A [Listeria monocytogenes]
gi|298360664|gb|ADI77911.1| truncated internalin A [Listeria monocytogenes]
gi|298360686|gb|ADI77922.1| truncated internalin A [Listeria monocytogenes]
gi|298360702|gb|ADI77930.1| truncated internalin A [Listeria monocytogenes]
gi|298360718|gb|ADI77938.1| truncated internalin A [Listeria monocytogenes]
gi|443428870|gb|AGC92234.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 314 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|157138545|ref|XP_001664247.1| hypothetical protein AaeL_AAEL014027 [Aedes aegypti]
gi|108869471|gb|EAT33696.1| AAEL014027-PA [Aedes aegypti]
Length = 560
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 17/240 (7%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
FL M+ LE+L ++ + ++++ + ANL L +S FS + PN+
Sbjct: 304 FLRNMQRLEYLKITDATHVAGNLDLSSYENANLEKLYVSAATFSRNTLPRFFEKSPNIRS 363
Query: 147 LSL---SGTQIDDYAISYMSMMPSLKFIDISNT---DIKGFIQQVGAETDL---VLSLTA 197
L+L S I D +S+ + + SL+++++ T D F + V ++ + A
Sbjct: 364 LTLYQCSYENIHDLQLSF-AHLKSLEYLNLQRTFDIDDSFFSRTVFDSVNMPFERIRFFA 422
Query: 198 LQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
+ NL L LNL + + +SD TL LS F L + LR ++TD + L
Sbjct: 423 VTNLTKLCYLNLSRCRDLSDETLVALS-FPRLKKIDLRGLNITDFGVRALVRQCPRLEYV 481
Query: 257 IRDA---VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICP 313
DA + ++ L + + LKLL+L G +T DA + H R VW + + CP
Sbjct: 482 HVDACKRICDSAVLMLCRDLKRLKLLNLDGCRSIT-DASIDHVINHCRTLVWLNM-MNCP 539
>gi|423396930|ref|ZP_17374131.1| hypothetical protein ICU_02624 [Bacillus cereus BAG2X1-1]
gi|401651506|gb|EJS69071.1| hypothetical protein ICU_02624 [Bacillus cereus BAG2X1-1]
Length = 510
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-----IQQVGAET----- 189
HL +LE +++ T +++ +S + MPSLK +DISNTDIK + Q++ + T
Sbjct: 305 HLQHLEEMNIKKTSVNN--LSALVEMPSLKKLDISNTDIKDYSLLPQFQKLESLTVHISN 362
Query: 190 -DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLS 247
+ + +++ + L HL L LE VS+ L L +LI + N+ + ++ + +
Sbjct: 363 HEQLYAISKVDTLKHLYILGLE--NVSELDLLVLQNLNKLITIEFENSIIANLYCIQHNA 420
Query: 248 SLS--KLTNLSIRDAVLTNSGLGSFKPPRSLKL 278
S+ KLT+ ++D + LG K + L+L
Sbjct: 421 SIQNIKLTDTKVKDG----AALGKMKGLKELEL 449
>gi|291001373|ref|XP_002683253.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
gi|284096882|gb|EFC50509.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
Length = 461
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L +L +SN + GV L LP L L+ T+ID+ + Y+S M +LK ++I
Sbjct: 352 LTSLTISNNPIFNEGVKYLT-ELPQLTNLNARFTKIDNEGVKYLSEMANLKILNIK---- 406
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 228
+ ++Q +G E S+ ++NL L+ +EQ ++S+ + L K+L
Sbjct: 407 RNYVQDLGVE-----SICGMKNLTELD---IEQNEISEEGVAKLKEMKQL 448
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 85 FC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 143
FC ++Q+ L+ L++++ IG+ V+ + +G NL L++ NT + G+ ++A L N
Sbjct: 153 FCQAISQLTNLQKLNVNNCKIGNLGVQFITQLG-NLMELSVINTGMDAKGLNLIATRLKN 211
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 203
L L +GT ++S M + SL + D+KG A+ +N+
Sbjct: 212 LTKLQFNGTVQHVTSLSNMKQLTSLSMGFDVDVDVKG--------------AKAISEMNN 257
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
L L+L +D L + +L L + LT + L L L KL L++ D
Sbjct: 258 LTNLSL---NTNDEGLEEICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNLND 310
>gi|149242641|pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
gi|149242643|pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINERE 62
+++F N T +T L N++ L + ++N I I PLA ++ L G T N +
Sbjct: 67 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQI 119
Query: 63 AFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDL 99
+ +E S + D+S +SL + F L + LE LD+
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDI 179
Query: 100 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYA 158
SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL+G Q+ D
Sbjct: 180 SSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD-- 230
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLE 210
I ++ + +L +D++N I G T+L L +++ L L L L L
Sbjct: 231 IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN 290
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
+ Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 291 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 328
>gi|391340788|ref|XP_003744718.1| PREDICTED: chaoptin-like [Metaseiulus occidentalis]
Length = 1224
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 65/331 (19%)
Query: 2 FPRLSFLNLAWTGVTK--------LPNISSLECLNLSNCTIDSILEGNENKAP------- 46
FP L+ ++L ++ +++ LPN LE ++LS+C ID++ E N+ P
Sbjct: 546 FPDLTTIDLRYSAISRVGSNALYYLPN---LEFVHLSHCRIDTLDEVAFNRLPALQLLDL 602
Query: 47 ----LAKISLAGTTFINE------------------REAFLYIETSLLSFLDVSN----- 79
L +SL+ +++ R ++E +++ V N
Sbjct: 603 SHNRLRNLSLSSFCQLSDFDIVPSTVDLSHNQIKSLRAQDDHLEYECQNYITVLNLKHNH 662
Query: 80 -SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 138
S + FLT L LDLS +++GD ++ + + LNLS+ R + +
Sbjct: 663 ISDIDFDAFLTVKNTLLELDLSHNLLGDQQLKKFIDL-KRVSRLNLSHNRLAMLPRRAMT 721
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 198
G L NL+ L LS I S ++ +P L+ +D+S+ +I + + A
Sbjct: 722 G-LFNLQELDLSSNLIQQITPSALASLPKLRAVDLSSNNIS------------FIPIDAF 768
Query: 199 QNLNHLERLNLEQTQ---VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
N +E LNLE+ Q + +A + + ++LS N + ++ + + L++L +L
Sbjct: 769 -NGTSIEVLNLERNQLPSLKNAAFRSIGSNLTELYLS-HNDDMHALTNGEFAYLTQLLHL 826
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
SI + + GSF L LD+ WL
Sbjct: 827 SISNCGIKTITPGSFNDLSLLISLDISNNWL 857
>gi|356561612|ref|XP_003549075.1| PREDICTED: receptor-like protein 12-like [Glycine max]
Length = 1093
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 24/196 (12%)
Query: 72 LSFLDVSNSSLSRF-----CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 126
L++LD+S + R FL M +L HLDLS + + NL NL +
Sbjct: 120 LNYLDLSGNVFLREGMAIPSFLGTMTSLTHLDLSFTGFRGKIPPQIG----NLSNLVYLD 175
Query: 127 TRFSSAG-VGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTDIKGFIQ- 183
R+ + G V G+L L L LS + AI S++ M SL +D+S T+ G I
Sbjct: 176 LRYVANGTVPSQIGNLSKLRYLDLSYNDFEGMAIPSFLCAMTSLTHLDLSLTEFYGKIPP 235
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-- 241
Q+G L NL +L+ N + + +S+ +L +L LRNA+L+
Sbjct: 236 QIGN----------LSNLLYLDLGNYFSEPLFAENVEWVSSMWKLEYLHLRNANLSKAFH 285
Query: 242 SLHQLSSLSKLTNLSI 257
LH L SL LT+L +
Sbjct: 286 WLHTLQSLPSLTHLYL 301
>gi|422421355|ref|ZP_16498308.1| internalin A, partial [Listeria seeligeri FSL S4-171]
gi|313638974|gb|EFS03990.1| internalin A [Listeria seeligeri FSL S4-171]
Length = 493
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 28/243 (11%)
Query: 66 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNL 124
Y+E L+ +D + S++ LT + L ++D + + V + G NL LNL
Sbjct: 95 YMEN--LTGIDFTYCSVTDLTPLTNLTKLTYVDFDEN---GNIVNLEPLAGLTNLETLNL 149
Query: 125 SNTRFSSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
F V ++ +L NL+ L L G I D +S +S + +L+ +DI N +I
Sbjct: 150 G--AFEGNSVVDISSLANLTNLKALDLEGNNIVD--VSALSGLTNLESLDIYNNEIS--- 202
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
++AL +L +L L L +SD T PL++ + L L R L +
Sbjct: 203 -----------DISALSSLTNLNSLFLGANTISDLT--PLTSMQNLTILESRGNGLVNKD 249
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 302
L ++SLS L L ++D +T+ + SL ++D G + I+ + H +
Sbjct: 250 LEIINSLSSLKTLRMQDNDITDLSFFNTCSSTSLNMVDFGGNHISDIRPIMTYRNGHRNL 309
Query: 303 EVW 305
+
Sbjct: 310 STY 312
>gi|290997409|ref|XP_002681274.1| predicted protein [Naegleria gruberi]
gi|284094897|gb|EFC48530.1| predicted protein [Naegleria gruberi]
Length = 237
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++++ L +L++ ++ I D+ +E + C NL +L +S+ R +S ++ L NL L
Sbjct: 50 ISELRNLTYLNIGNNPINDEGIESI-CQLDNLTDLTVSSLRITSKSAKFIS-KLNNLTFL 107
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+++ I D ++S + SLK +DIS + G I +GA+ ++ L+ L L
Sbjct: 108 NIAYNNIGDEGAKFISEIKSLKILDIS---LNG-ISPIGAK--------SISELDQLTVL 155
Query: 208 NLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+ Q + D +S K+L L +++ + + +S + KLT+L I + + G
Sbjct: 156 YISQNFGIGDEGARMISEMKQLNELYIQDCFIGNAGAISISRMDKLTHLDISENEIQIEG 215
Query: 267 LGSFKPPRSLKLLDLH 282
+ + L L +
Sbjct: 216 ETVIRDMKHLSYLSIE 231
>gi|343477165|emb|CCD11936.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 536
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 90/224 (40%), Gaps = 32/224 (14%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN-- 175
L LNL S GVG LA LP L L+L+GT IDD + + SL +D+S
Sbjct: 264 TLETLNLRYCSKLSLGVGALA-TLPRLHTLALTGTIIDDAVLEEVCKSTSLLTLDLSYCI 322
Query: 176 --TDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
TD+ + + + L +L L T+++DA + + K
Sbjct: 323 RLTDVSALSALPTLRELDIDGCRSITVGLDSLGGLPQFCMAKCASTRITDACVRIIGKSK 382
Query: 227 ELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 285
L LSL + L+D++ L+S++ L L +R GLGS L LDL
Sbjct: 383 SLTVLSLPHCGYLSDIT--PLASITTLETLELRGCSWITKGLGSLSALPVLCTLDLSSSH 440
Query: 286 LLTED----------AILQFCKMHPRIEVWHELSVICPSDQIGS 319
+ E L+ C EL+ I P Q+GS
Sbjct: 441 INDEQFRELSLSKSIKALKLCD-------CEELTDITPISQMGS 477
>gi|356542427|ref|XP_003539668.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
TDR-like [Glycine max]
Length = 1022
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 44/281 (15%)
Query: 11 AWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIET 69
+W +T S + L+LS+ + + + + L ++L+G F + ++ E
Sbjct: 69 SWRAITCHSKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFTGSFQYAIF-EL 127
Query: 70 SLLSFLDVSNSSL-SRFC-FLTQMKALEHLD-LSSSMIGDDSVEMVACVGANLRNLNLSN 126
+ L LD+S++S S F ++++K L H + S+S G E+ L LNL
Sbjct: 128 TELRTLDISHNSFNSTFPPGISKLKFLRHFNAYSNSFTGPLPQELTTL--RFLEQLNLGG 185
Query: 127 TRFSSAGVGILAGHLPNLEILSLSG--------------TQIDDYAISY----------M 162
+ FS G+ G P L+ L ++G +++ I Y +
Sbjct: 186 SYFSD-GIPPSYGTFPRLKFLDIAGNALEGPLPPQLGHLAELEHLEIGYNNFSGTLPSEL 244
Query: 163 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
+++ +LK++DIS+T+I G + + L NL LE L L + +++ +
Sbjct: 245 ALLYNLKYLDISSTNISGNV------------IPELGNLTKLETLLLFKNRLTGEIPSTI 292
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
K L L L + LT Q++ L++LT L++ D LT
Sbjct: 293 GKLKSLKGLDLSDNELTGPIPTQVTMLTELTTLNLMDNNLT 333
>gi|195378686|ref|XP_002048114.1| GJ13783 [Drosophila virilis]
gi|194155272|gb|EDW70456.1| GJ13783 [Drosophila virilis]
Length = 1556
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 15/226 (6%)
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 122
A + SLL L++S++ LS T M ++ +S + ++ + + +
Sbjct: 471 ANTFRHNSLLETLNISSNELSHIHPGTFMHLERLFEVDASF--NQLSAIIPGLPQIVERI 528
Query: 123 NLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
+L R ++ G + LPNL +L LS QI+ A P L+ + ++ ++
Sbjct: 529 SLRGNRIAALPAAGSKSLQLPNLRMLDLSQNQIEQLARHGFQAAPQLRVLSLAQNQLR-- 586
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+L T+ + LE L+L+ Q+ A L EL +L+L++ L +
Sbjct: 587 ----------LLEDTSFIGIQRLELLHLQDNQLGQADERALLPLAELRNLNLQSNKLESI 636
Query: 242 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 287
+ + S+ S+L L + ++ + +F RSL+ LDL G LL
Sbjct: 637 TDNFFSNNSRLEQLDLSRNLIRSISPTAFDNQRSLEYLDLSGNALL 682
>gi|112959522|gb|ABI27288.1| truncated internalin A [Listeria monocytogenes]
Length = 538
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 136 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 188
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 189 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 246
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 247 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 299
>gi|71422249|ref|XP_812074.1| leucine-rich repeat protein (LRRP) [Trypanosoma cruzi strain CL
Brener]
gi|70876812|gb|EAN90223.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma cruzi]
Length = 415
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 5 LSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
L L+L+ TGVT L LE ++LS C L ++ L + L + +
Sbjct: 171 LKSLDLSRTGVTDDGLLALTACHLLEEVDLSGCDFICALPFMKSMGCLRVLKLRNSGITD 230
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQ-------MKALEHLDLSSSMIGDDSVEMV 112
+ + T+L+ LD++ CFL +K LE ++ S I D VE +
Sbjct: 231 RAISAIGAATALV-HLDIAG------CFLVTSLNPLGGLKRLEWMNASWCGIRDGGVEGL 283
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
+C G NL L+++ + V +L G L L++L L GT +DD I+ +S SL +
Sbjct: 284 SCCG-NLEYLSMARC-WDIHNVNVL-GVLSKLQVLDLCGTNVDDEGIAGLSRCASLCSLS 340
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+S+ + S+ AL + L+ +++ T V++ +L L ++ ++
Sbjct: 341 LSDCFC-------------IYSVRALAAMPSLKEMDVSYTAVTEESLSLLPSWVRVV 384
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 78 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDS-VEMVACVGANLRNLNLSNTRFSSAGVGI 136
S +L+R L+ + +L+ LDLS + + DD + + AC L ++LS F A
Sbjct: 155 SCRTLTRVEALSHLHSLKSLDLSRTGVTDDGLLALTAC--HLLEEVDLSGCDFICALP-- 210
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 196
+ L +L L + I D AIS + +L +DI A LV SL
Sbjct: 211 FMKSMGCLRVLKLRNSGITDRAISAIGAATALVHLDI-------------AGCFLVTSLN 257
Query: 197 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
L L LE +N + D + LS L +LS+ A D+ H ++ L L+ L
Sbjct: 258 PLGGLKRLEWMNASWCGIRDGGVEGLSCCGNLEYLSM--ARCWDI--HNVNVLGVLSKLQ 313
Query: 257 IRDAVLTN 264
+ D TN
Sbjct: 314 VLDLCGTN 321
>gi|290976253|ref|XP_002670855.1| predicted protein [Naegleria gruberi]
gi|284084418|gb|EFC38111.1| predicted protein [Naegleria gruberi]
Length = 286
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++ M L HLD+S + IGD+ +++ C L NLN+S + +S G+ I + L IL
Sbjct: 70 ISNMTRLTHLDISLNNIGDEGAKII-CQLKQLTNLNISYNQITSNGM-IPFKEMKQLIIL 127
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL--------- 198
++ +I + I +S + L +DI D F + + +LT L
Sbjct: 128 NVGSNRIGNEGIENISGLSQLTELDIGGCD---FGNEGAKSISQLTNLTCLYCCSNNIRE 184
Query: 199 ---QNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
++++ LE+ LNL + +S K+L HL + + + D L L L
Sbjct: 185 EGAKSISQLEKVTCLNLCVNYLHADGAKHISQMKQLTHLYMDSNEIGDDGAEDLCGLENL 244
Query: 253 TNLSIR------DAVLTNSGLGSFKPPRSLKLLD 280
LSIR D V LG F L D
Sbjct: 245 KVLSIRGNNISYDMVQAIHELGKFTVESEGNLFD 278
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 14/189 (7%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
M L L L + +GD+S ++ L +L + N G ++ + L L++
Sbjct: 1 MSQLTELSLECNQLGDESAHKISQF-KQLTSLGVENNEIGPTGAKSIS-TMKQLTSLNIK 58
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 210
+ +S M L +DIS + +G E ++ L L LN+
Sbjct: 59 NNSVGVEGAHSISNMTRLTHLDIS-------LNNIGDEGAKIIC-----QLKQLTNLNIS 106
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
Q++ + P K+LI L++ + + + + +S LS+LT L I N G S
Sbjct: 107 YNQITSNGMIPFKEMKQLIILNVGSNRIGNEGIENISGLSQLTELDIGGCDFGNEGAKSI 166
Query: 271 KPPRSLKLL 279
+L L
Sbjct: 167 SQLTNLTCL 175
>gi|449134939|ref|ZP_21770403.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448886418|gb|EMB16825.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 341
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
LPNL+ L + G + DD +S +P+L + +T + V AE
Sbjct: 116 LPNLKRLRIYGKEFDDAKAKSISGLPALIAVTFQDTSVTDDGASVLAE------------ 163
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 LNELQDISLMNSPVTDKTLIAISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++ + AL + + + DD ++A + L++++L N+ + + I LP L L
Sbjct: 137 ISGLPALIAVTFQDTSVTDDGASVLAELN-ELQDISLMNSPVTDKTL-IAISTLPKLTKL 194
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LEDLELAETDF-------GPE-----GMPAIANIEGLEKV 241
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
NL T++ + +L L L++ N ++T+ ++ + SL L L + +
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDA 301
Query: 267 LGSFKPPRSLKLL 279
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|85679266|gb|ABC72049.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 102/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITN--ISSLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|423407774|ref|ZP_17384923.1| hypothetical protein ICY_02459 [Bacillus cereus BAG2X1-3]
gi|401659100|gb|EJS76589.1| hypothetical protein ICY_02459 [Bacillus cereus BAG2X1-3]
Length = 510
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-----IQQVGAET----- 189
HL +LE +++ T +++ +S + MPSLK +DISNTDIK + Q++ + T
Sbjct: 305 HLQHLEEMNIKKTSVNN--LSALVEMPSLKKLDISNTDIKDYSLLPQFQKLESLTVHISN 362
Query: 190 -DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLS 247
+ + +++ + L HL L LE VS+ L L +LI + N+ + ++ + +
Sbjct: 363 HEQLYAISKVDTLKHLYILGLE--NVSELDLLVLQNLNKLITIEFENSIIANLYCIQHNA 420
Query: 248 SLS--KLTNLSIRDAVLTNSGLGSFKPPRSLKL 278
S+ KLT+ ++D + LG K + L+L
Sbjct: 421 SIQNIKLTDTKVKDG----AALGKMKGLKELEL 449
>gi|384252153|gb|EIE25630.1| hypothetical protein COCSUDRAFT_83637 [Coccomyxa subellipsoidea
C-169]
Length = 433
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 50/325 (15%)
Query: 2 FPRLSFL--------NLAWTGVTKLPNISSLECLNLSNC--TIDSILEGNENKAPLAKIS 51
FP L L N+ VT+ + L+ L+L+ C D L G L K+S
Sbjct: 67 FPELQALFMDGCEGVNMTNEQVTEAGRLRYLKTLSLAGCRACTDKGLAGLAVIEGLQKLS 126
Query: 52 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 111
L+ + R L L S+S +S LDL DDS
Sbjct: 127 LSKCNALTSRT---------LDLLQTSSSLIS-------------LDLGQCAWVDDSSMA 164
Query: 112 VACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLK 169
+ C A+L+ L+L++ R ++ GV +A L +E L+LSG +IDD + ++ + SL+
Sbjct: 165 LLCNSASLKQLSLADCVRLTNRGVQSVA-KLKCIEALNLSGLREIDDAGVEALAAVTSLR 223
Query: 170 FIDISNT-DIKGF-IQQVGAETDLVL---------SLTALQNLNHLERLNLEQT-QVSDA 217
+++ ++G + ++G L + SL L + LE L L+ +++D
Sbjct: 224 ELNLDRCGQVRGLTLAKLGGLHKLSMCDCPCIADDSLGCLSGVTSLEDLKLDMCDKITDK 283
Query: 218 TLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNS-GLGSF-KPPR 274
L++ L L L D ++ +LS+L +L +L + V + GLG +
Sbjct: 284 GAGALASMSALEDLDLHRCERLDCEAMRRLSALGQLRSLRLSGCVYIKAEGLGHLARGCP 343
Query: 275 SLKLLDLHGGWLLTEDAILQFCKMH 299
L LDL G + ++ + +M
Sbjct: 344 LLSRLDLAGCVGIKDEGMQALAEMQ 368
>gi|219821357|gb|ACL37816.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL ++ +N + S +GIL NL+
Sbjct: 145 LANLTTLERLDISSNKVSD--ISVLAKL-TNLESIIATNNQISDITPLGILT----NLDE 197
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 198 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 255
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 256 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 308
>gi|195021232|ref|XP_001985356.1| GH17015 [Drosophila grimshawi]
gi|193898838|gb|EDV97704.1| GH17015 [Drosophila grimshawi]
Length = 1548
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Query: 66 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
+ LL L++S++ LSR T M ++ +S + ++ + + ++L
Sbjct: 474 FRHNGLLETLNISSNELSRIQPGTFMHLERLFEVDASF--NQLTVVIPGLPQIVERISLR 531
Query: 126 NTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
R ++ G + LPNL +L LS +I+ A P L+ + ++ ++
Sbjct: 532 GNRITALPAAGSKSLQLPNLRMLDLSQNRIEQLARHGFQAAPELRVLSLAQNQLR----- 586
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+L T+ + LE L+L+ Q+ A L EL +L+L++ L V+ +
Sbjct: 587 -------LLEDTSFLGIQRLELLHLQDNQLGQADERALLPLAELRNLNLQSNKLESVTDN 639
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 287
S+ S+L L + ++ +F RSL+ LDL G LL
Sbjct: 640 FFSNNSRLEQLDLSRNLIRTISPTAFDNQRSLEYLDLSGNALL 682
>gi|46446912|ref|YP_008277.1| hypothetical protein pc1278 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400553|emb|CAF24002.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 731
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 42/289 (14%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
TG+ L + SL+ LNL +C K++ AG + A ++ +L+
Sbjct: 363 TGLVYLAPLVSLQYLNLFDCI---------------KLTDAGLAHLTPLVALRHL--NLM 405
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSN-TRFS 130
++N+ L L + AL+HLDLS + D + +A + A L++L LS T +
Sbjct: 406 GCNKLTNAGLMH---LRPLMALQHLDLSCCRNLTDAGLAHLAPLVA-LQHLCLSECTNLT 461
Query: 131 SAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISN----TDIK-GFIQQ 184
AG+ L L NL+ L+L S ++ D +++++ + +L+ +D+S TD ++
Sbjct: 462 GAGLAHLKP-LVNLQHLNLNSCYKLTDAGLAHLTPLMALQHLDLSCCRNLTDAGLAHLRP 520
Query: 185 VGAETDLVLS---------LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLR 234
+ A L L+ LT L L L+ LNL + ++DA L L L HL+L
Sbjct: 521 LVALQHLDLNCCKNFTDAGLTHLTPLVALQHLNLSCCRNLTDAGLAYLMPLVALSHLNLA 580
Query: 235 NA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 281
+ TD L L+ L L +L++ D LTN+GL P +L+ LDL
Sbjct: 581 GCHNFTDAGLAHLAPLVALQHLNLGDCYRLTNAGLEHLTPLVALQHLDL 629
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 88 LTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLE 145
LT + AL+HLDLS + D + + + A L++L+L+ + F+ AG+ L L L+
Sbjct: 493 LTPLMALQHLDLSCCRNLTDAGLAHLRPLVA-LQHLDLNCCKNFTDAGLTHLTP-LVALQ 550
Query: 146 ILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
L+LS + + D ++Y +MP + +S+ ++ G A + L ALQ+LN
Sbjct: 551 HLNLSCCRNLTDAGLAY--LMP---LVALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLG 605
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VL 262
+ L ++A L L+ L HL L LTD L L L LT+L + + L
Sbjct: 606 DCYRL-----TNAGLEHLTPLVALQHLDLSECEKLTDAGLTHLVPLVALTHLDLSECDKL 660
Query: 263 TNSGLGSFKPPRSLKLLDLHGGWLLT-------------EDAILQFCKMHPRIEVWHELS 309
T++GL P +L+ L+L+ LT +D L +CK + + H S
Sbjct: 661 TDAGLAHLTPLEALQHLNLNWCDKLTDAGLAHLTPLLALQDLYLGYCKNFTEVGLAHFKS 720
Query: 310 VICP 313
+ P
Sbjct: 721 SVAP 724
>gi|359490164|ref|XP_002268910.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO2-like [Vitis vinifera]
Length = 1198
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LSF D+ N S+ + F M +LE+LDLS S + + L +L+LS +
Sbjct: 273 LSFNDL-NGSIPEYAF-GNMNSLEYLDLSRSYLTSSIYPWLLNFNTTLLHLDLSFNDLNG 330
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
+ G++ +LE L LSG+Q+D ++ + M SL ++D+S ++G I
Sbjct: 331 SIPEYAFGNMNSLEYLDLSGSQLDGEILNAIRDMSSLAYLDLSENQLRGSI 381
>gi|46447129|ref|YP_008494.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400770|emb|CAF24219.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 559
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 19/218 (8%)
Query: 84 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLP 142
R LT + AL+HL+LS D+ + L++L+LS + + AG+ L L
Sbjct: 267 RLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTP-LK 325
Query: 143 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQN 200
L+ L+L G ++ D + +++ + +L+++D+S + + + TD L+ LT L
Sbjct: 326 ALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLS------WCKNL---TDAGLAHLTPLTG 376
Query: 201 LNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 258
L HL NL ++DA L L L HL L + +LT L +L+SL+ L +L +
Sbjct: 377 LQHL---NLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLERLTSLTALQHLGLS 433
Query: 259 DAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 295
+ LT++GL P +L+ L+L G + LT+ ++
Sbjct: 434 YCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHL 471
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-----EMVACVG 116
E F E SL+ ++ N + C L ++K + S+++ S ++ +
Sbjct: 167 ETFNSTEESLIGLKELLN--FAHRCQLNRLKNYLEFIVVSTLLNQTSQLAEFERIINHLS 224
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN 175
+ LN SN + + NL++L L Q I D +++++ + +L+ +++S
Sbjct: 225 NEIEALNFSNNTYLTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSK 284
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
+ +T LV LT L L HL+ + ++DA L L+ K L HL+LR
Sbjct: 285 C-------RKLTDTGLV-HLTPLTALQHLDLSYCKN--LTDAGLAHLTPLKALQHLNLRG 334
Query: 236 -ASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 292
LTD L L+ L+ L L + LT++GL P L+ L+L G + LT+ +
Sbjct: 335 FGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGL 393
>gi|72385461|ref|XP_846398.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|25956236|emb|CAB95328.2| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 123/296 (41%), Gaps = 69/296 (23%)
Query: 13 TGVTKLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
+ V L NI +LE L+L CT ID+ + N L + L+GT NE L + ++
Sbjct: 529 SNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTV 588
Query: 72 LSFLDVSNS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+S L++S+ ++ ++ ++AL L+LS+ C G N
Sbjct: 589 VS-LNLSHCWKMTNVSHISSLEALNELNLSN------------CFGIN------------ 623
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
AG L L L + LS T I D IS+ S +L +D+S F ++
Sbjct: 624 -AGWEALE-KLQQLHVAILSNTHITDRDISHFSNCKNLITLDLS------FCNKL----- 670
Query: 191 LVLSLTALQNLNHLERLNLEQ------------------------TQVSDATLFPLSTFK 226
L +TAL N+ LE LNL+ Q+ D+ + L
Sbjct: 671 --LDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGN 728
Query: 227 ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ LSL N DV+ LS+L L L++ SG+G+ L++LDL
Sbjct: 729 SFVRLSLENCKGFGDVA--PLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDL 782
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 63/275 (22%)
Query: 2 FPRLSFLNLAWTG-----VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
PRL LN+ + L N +S L+L NC +G + APL+ +
Sbjct: 703 LPRLCVLNIKGVQLEDSVIVSLGNGNSFVRLSLENC------KGFGDVAPLSNL------ 750
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ +E L + D S + L Q++ L DL + + D+S+E +
Sbjct: 751 --------VTLEELNLHYCDKVTSGMGTLGRLPQLRVL---DLGRTQVDDNSLENICTCS 799
Query: 117 ANLRNLNLSNTRFSSAGVGILA----------------------GHLPNLEILSLSGTQI 154
+ L +LNLSN + ++ I + G L L + +LS T+
Sbjct: 800 SPLVSLNLSNCKKITSISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRT 859
Query: 155 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 214
+D + ++S SL ++++ F + + TD +TAL + LE LNL+
Sbjct: 860 NDENVRHVSECKSLNTLNLA------FCKDI---TD----VTALSKITMLEELNLDCCHN 906
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+ L T + LS++ + D Q S L
Sbjct: 907 IRKGIETLGTLPKARILSMKECYMGDGYAQQCSIL 941
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 50/288 (17%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T T + +++LE LNLSNC I T I L + L
Sbjct: 317 TDATPISQLAALEELNLSNCHI--------------------TKGIGTLGMLLRLRMLDL 356
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
S + V ++ L C +LE L++S + D + + LNL+ R +
Sbjct: 357 SGVPVEDNCLKDLC---DCGSLERLNISYRIQLTDINPLSN--ATAIEELNLNGCRRITR 411
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------- 181
G+G++ LP L +L + + + ++ + L + +S + GF
Sbjct: 412 GIGVVWA-LPKLRVLHMKDVHLSEPSLDSVGTGGPL--VKVSLDNCAGFGDMTLLSSIVT 468
Query: 182 -----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
IQ+ D++ + L L +L LN+++ +S + K L+ L++
Sbjct: 469 LEELNIQKCA---DIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNME-- 523
Query: 237 SLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
S+T +S + L+++ L LS+ ++G+G LK+LDL G
Sbjct: 524 SITGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 571
>gi|301088808|ref|XP_002894796.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108394|gb|EEY66446.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 825
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 93 ALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS 150
+L L+L + + IGDD++ ++ G NL LNL R S G+ LA P L+ +SLS
Sbjct: 318 SLAFLNLKNCLNIGDDAMVLIGKYGGNLIKLNLKGLRKVSDRGIMELAKGCPLLKKMSLS 377
Query: 151 GTQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQVGAETDL---VLSLTALQNLNHLER 206
G I + + L+ +DIS DL L + ++ L R
Sbjct: 378 GRNITVQTFKLLGKLCRKLQVLDISR------------RRDLESPACFLHLVSRVHPLLR 425
Query: 207 LNLEQTQVSDATLFPL-STFKELIHLSL-RNASLTDVSLHQLSS------LSKLTNL-SI 257
++L T V DA + L S ++L +++L + A +TD + L+S + L N I
Sbjct: 426 IDLSATNVCDAGVTLLASACRQLENINLSKCAQITDFAAEALASRCFQLRILLLANARGI 485
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 303
D LT L K P L++LDL G +T++ +L C +I+
Sbjct: 486 TDRTLT--ALAFTKIP--LEILDLSGNTRVTDEGLLVLCSGCQQIQ 527
>gi|449018164|dbj|BAM81566.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]
Length = 1220
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF---------SSAGVGILAGHL 141
+ LE+LDLS SV ANLR L + R ++A V +LA H+
Sbjct: 949 LNTLEYLDLSHC----QSVSF-----ANLRTLRSESLRILILDHCSGVTNACVALLAYHV 999
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDLVLSLTALQ 199
PNL+ LSL T + D I+ + +F + ++G + VG + L A
Sbjct: 1000 PNLQELSLRFTAVGDLGIAAFAN----RFRHLEKLHLRGLPDVTHVG-----IRRLAASP 1050
Query: 200 NLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI 257
L L L E + + L L+ K L +LSL+ + + D +L QL + LT L++
Sbjct: 1051 LATKLRVLELAECPAIGELALASLNGMKALEYLSLKGCTEINDAALRQLEDVPVLTVLNL 1110
Query: 258 RDAVLTNS 265
R L +S
Sbjct: 1111 RQCPLVSS 1118
>gi|46447300|ref|YP_008665.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400941|emb|CAF24390.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 518
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISL--------AGTTFI 58
NL G++ L + +L+ LNLS C+ D+ L + L + L AG T +
Sbjct: 221 NLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKCYNLTDAGLTHL 280
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGA 117
A ++ S S ++++ L+ LT + L+HLDL+ + + D + + + A
Sbjct: 281 TPLAALQHLNLSYCS--KLTDAGLAH---LTSLVTLQHLDLTWCVNLTDVGLAHLTPLAA 335
Query: 118 NLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN 175
L++LNLS + + G+ L L L+ L L+ + + +++++ + +L+ +++S
Sbjct: 336 -LQHLNLSYCIKLTDVGLAHLTS-LVALQHLDLTWCVNLTEVGLAHLTPLVTLQHLELSK 393
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
A + SL ALQ+LN L++ + +++D L L+ L HL L
Sbjct: 394 CH-----NLTDAGLAHLTSLVALQHLN----LSICK-KITDVGLAHLTPLVALQHLDLSG 443
Query: 236 A-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 293
LTDV L L++L L +L + V LT++GL KP +L+ L+L LT+ +
Sbjct: 444 CDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTNLTDAGLA 503
Query: 294 QF 295
F
Sbjct: 504 HF 505
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 68
NL G+T L +++L+ LNLS C +K++ AG + +++
Sbjct: 271 NLTDAGLTHLTPLAALQHLNLSYC---------------SKLTDAGLAHLTSLVTLQHLD 315
Query: 69 -TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS- 125
T ++ DV LT + AL+HL+LS + + D + + + A L++L+L+
Sbjct: 316 LTWCVNLTDVG------LAHLTPLAALQHLNLSYCIKLTDVGLAHLTSLVA-LQHLDLTW 368
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+ G+ L L L+ L LS + D +++++ + +L+ +++S I I
Sbjct: 369 CVNLTEVGLAHLTP-LVTLQHLELSKCHNLTDAGLAHLTSLVALQHLNLS---ICKKITD 424
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSL 243
VG + LT L L HL+ + +++D L L+T L HL L +LTD L
Sbjct: 425 VG-----LAHLTPLVALQHLDLSGCD--KLTDVGLAHLTTLVALQHLDLTCCVNLTDAGL 477
Query: 244 HQLSSLSKLTNLSIRDAV-LTNSGLGSFK 271
L L L +L++ LT++GL FK
Sbjct: 478 VHLKPLMALQHLNLSYCTNLTDAGLAHFK 506
>gi|326494012|dbj|BAJ85468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1052
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 110/254 (43%), Gaps = 24/254 (9%)
Query: 18 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 77
LP ++SL L+LS+ + L + A L + ++G + A L + LL L+V
Sbjct: 144 LPLLASLRYLDLSSNALSGPLPMSFPPA-LRFLVISGNRLSGDVPAGLS-GSPLLLHLNV 201
Query: 78 SNSSLSRF----CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSS 131
S + LS L + L LDLS + + S + A VGA NL+ L+LS RFS
Sbjct: 202 SGNELSGAPDFASALWSLSRLRTLDLSRNRL---SGPVAAGVGALHNLKTLDLSANRFSG 258
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
A V G P+L + LSG D M+ + SL + S+ + G +
Sbjct: 259 A-VPEDIGLCPHLAAVDLSGNAFDGELPESMARLASLVRLSASSNRLSGDVP-------- 309
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
L L L+RL+L ++ A L K+L +L L L +S ++
Sbjct: 310 ----AWLGGLAALQRLDLSDNALTGALPDSLGDLKDLSYLGLSKNRLAFSVPEAMSGCTR 365
Query: 252 LTNLSIRDAVLTNS 265
L L +R LT S
Sbjct: 366 LAELHLRGNQLTGS 379
>gi|290972682|ref|XP_002669080.1| predicted protein [Naegleria gruberi]
gi|284082622|gb|EFC36336.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ LD+ ++++S + Q+ L LD+ + I D + + +G L L L +S
Sbjct: 239 LTNLDMVSNNISDLSSIGQLGLLNCLDVRKNKIEDTGIRNICQLGG-LNALRLCGNPITS 297
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGA 187
G IL+ + L LS+S T IDD +++ + +LK++DIS I FI Q
Sbjct: 298 EGAKILS-EMVQLTNLSISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQ--- 353
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
L+ L L++ + D + +S ++L L NA ++ L
Sbjct: 354 -------------LSKLISLDINWNNIGDEGVLYISRMQQLETL---NAVYCNIGLEGAK 397
Query: 248 SLSKLTNLSIRDA 260
LS++ L++ D
Sbjct: 398 LLSEMEQLTVLDV 410
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 18/174 (10%)
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NL LN+ + S IL+G + +L+IL+ SG++ID ++ ++ + + + D
Sbjct: 3 NLTYLNIDWNKISEKSKIILSG-MKHLKILAASGSEIDKFSRLDQLTELNVNWNRLKDED 61
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
+K ++ NL +L L L ++S ++ +S EL LS+ S
Sbjct: 62 VK-----------------SIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNS 104
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
+ + ++ + +LSKLT L+I +A +T+ G+ +L +LD+ G + E
Sbjct: 105 IENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGG 158
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 145/333 (43%), Gaps = 33/333 (9%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENK-----APLAKIS 51
+L+ LN+ W V + N+ +L L LS I N K + L K+S
Sbjct: 44 LDQLTELNVNWNRLKDEDVKSIGNLKNLTLLELSGNEISK----NSMKFISQLSELTKLS 99
Query: 52 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSV 109
+ + NE + I S L+ L++ N++++ + ++ L LD+S ++IG +
Sbjct: 100 VGLNSIENEGINSI-INLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGG 158
Query: 110 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 169
+ + + NL+ L S+ G + G + L L L G I + Y+S + L
Sbjct: 159 QYIGELN-NLKILVASDNELGVFGAKSI-GEMNQLTSLCLIGNSIGNEGAKYISQLTQLT 216
Query: 170 FIDISNTDI--KGF--IQQVGAETDL------VLSLTALQNLNHLERLNLEQTQVSDATL 219
+D+ +I +GF + ++ T+L + L+++ L L L++ + ++ D +
Sbjct: 217 DLDLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSSIGQLGLLNCLDVRKNKIEDTGI 276
Query: 220 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
+ L L L +T LS + +LTNLSI + + + G +LK L
Sbjct: 277 RNICQLGGLNALRLCGNPITSEGAKILSEMVQLTNLSISETHIDDEGAKFIAQLTTLKYL 336
Query: 280 DLHGGWLLTEDAILQFCKMHPRIEV---WHELS 309
D+ +T + + C++ I + W+ +
Sbjct: 337 DISTKR-ITANGVKFICQLSKLISLDINWNNIG 368
>gi|297743514|emb|CBI36381.3| unnamed protein product [Vitis vinifera]
Length = 1157
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 119 LRNLNLSNTRF----SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
L +LNLS F + G L+ L LEIL +SG + D A+ + + SLK + I
Sbjct: 86 LHHLNLSANSFDGFIENEGFKGLSS-LKKLEILDISGNEFDKSALKSLGTITSLKTLAIC 144
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNL-------NHLERLNLEQTQVSDATLFPLSTFKE 227
+ + G + L +L+NL NHLE L Q + LS FK+
Sbjct: 145 SMGLNGSFS--------IRDLASLRNLEVLDLSYNHLESFQLLQDSKN------LSIFKK 190
Query: 228 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR------SLKLLDL 281
L L+L + + SL QL+ + L NLS+R G F P + +L +LDL
Sbjct: 191 LETLNLNHNKFKNTSLQQLNIFTSLKNLSLRRNY-----DGGFFPIQELCTLENLVMLDL 245
Query: 282 HGGWLLTEDAILQFCKMHPRIEV 304
G + + K+ ++E+
Sbjct: 246 SGNFFIGMQGFKSLSKLK-KLEI 267
>gi|87311421|ref|ZP_01093541.1| hypothetical protein DSM3645_25297 [Blastopirellula marina DSM
3645]
gi|87285833|gb|EAQ77747.1| hypothetical protein DSM3645_25297 [Blastopirellula marina DSM
3645]
Length = 192
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L L L+R+ L+QT ++D L EL ++L A +TD L +++ L +LT
Sbjct: 48 LQLLSRATQLQRIRLDQTPLADPAAAVLGALPELQFVNLPQADITDAGLAEIAKLPQLTQ 107
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L I LT++G+ + + SL+ L L
Sbjct: 108 LRIGSPHLTDAGIAALRDNPSLRFLHL 134
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 75 LDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
++VS+ ++S L++ L+ + L + + D + ++ + L+ +NL + A
Sbjct: 36 IEVSDRTVSPAELQLLSRATQLQRIRLDQTPLADPAAAVLGAL-PELQFVNLPQADITDA 94
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
G+ +A LP L L + + D I+ + PSL+F+ + T + TD
Sbjct: 95 GLAEIA-KLPQLTQLRIGSPHLTDAGIAALRDNPSLRFLHLLQTPL----------TDAA 143
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
L A +N LE L+QT +++ L L + +H+ ++ L
Sbjct: 144 LEHIA--EINSLESFYLDQTNITEPGLAKLIERRPQLHVHFDDSHL 187
>gi|343421641|emb|CCD18751.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGF-----IQQVGAET 189
G +P L +L+L + D + ++ SL ++++ TD++ ++QV
Sbjct: 129 GRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSG 188
Query: 190 DL--VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 246
V L AL +L L LNL+ T V+D L LS K L+ L L + LTDV+ L
Sbjct: 189 SFPGVRGLAALGSLPRLRELNLKHTAVTDDCLKTLSASKTLVRLFLVDCRRLTDVT--PL 246
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 296
+S L + + D G+G F L L L G LT++ + + C
Sbjct: 247 VKISSLQVVDLSDCSGITKGMGGFGTLSGLYALSLTGTA-LTDEQLQELC 295
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 85 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 143
C LT +L HL+L+ S + D VE +A + L +NLS + G+ L G LP
Sbjct: 149 LCSLTTSGSLTHLNLTECSRLTD--VEPLASI-KTLEQVNLSGSFPGVRGLAAL-GSLPR 204
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 203
L L+L T + D LK + S T ++ F+ TD+ T L ++
Sbjct: 205 LRELNLKHTAVTD---------DCLKTLSASKTLVRLFLVDCRRLTDV----TPLVKISS 251
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-RDAVL 262
L+ ++L + T L LSL +LTD L +L + L +LSI R +L
Sbjct: 252 LQVVDLSDCSGITKGMGGFGTLSGLYALSLTGTALTDEQLQELCASQSLESLSIKRCKLL 311
Query: 263 TNSG-LGSFKPPRSLKLLDLHG 283
T+ G LG R L + + G
Sbjct: 312 TDVGVLGFVTTLRELDMSECDG 333
>gi|194868299|ref|XP_001972268.1| GG13980 [Drosophila erecta]
gi|190654051|gb|EDV51294.1| GG13980 [Drosophila erecta]
Length = 534
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 24/278 (8%)
Query: 21 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 80
++LE N S I +I E N K L K+ T N +E E + L FL +SN+
Sbjct: 145 FANLEYANFSENLIANI-EPNAFK-DLKKLRFLDLT-TNYQENITLGENANLRFLSISNN 201
Query: 81 SLSRF--CFLTQMKALEHLDLSSSMIGDDSVEM-VACVGANLRNLNLSNTR-FSSAGVGI 136
+L F C + LE L L S+ + + ++M + NLR LN+SN F
Sbjct: 202 NLRDFQWCHFRGLPKLEELHLHSNWL--ERLDMGIFYALPNLRVLNVSNNNLFEIKRTLF 259
Query: 137 LA-GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID-----ISNTDIKGFIQQVGAET- 189
+A G + L++L S + S + L+ ++ I+ + F+ +T
Sbjct: 260 MAPGEVAPLDLLDYSSNNVRVLEDSVFCRLKQLRTLNLWLNQINRIHPRAFLGLCSLQTL 319
Query: 190 ------DLVLSLTALQNLNHLERLNLEQTQVSDATL--FPLSTFKELIHLSLRNASLTDV 241
VL NL LE+L+L + + L F ++L +L L N ++ D+
Sbjct: 320 HLQGNKISVLPDDVFANLTALEKLDLSRNNIKKLGLRVFGERILRKLTYLDLSNNNIADL 379
Query: 242 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
LSSL + L +R L L F P R L+LL
Sbjct: 380 HPLALSSLPFIKELRLRRNRLVTLDLRMFAPLRQLQLL 417
>gi|444722268|gb|ELW62966.1| C-Maf-inducing protein [Tupaia chinensis]
Length = 746
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 99 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 158
L S+ +G E + L+ L+ R S+G NLE LSL+ T +
Sbjct: 561 LESTDVGKRMYEQLCDRQRELKELDADLARLLSSG------SFGNLENLSLAFTNVTSAC 614
Query: 159 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 218
++ +PSLK +++ +T Q G +LS ++L L+ LNL +T V+DA
Sbjct: 615 AEHLIKLPSLKQLNLWST-------QFGDAGLRLLS----EHLTMLQVLNLCETPVTDAG 663
Query: 219 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
L LS+ K L L++ + L+ + L +KL NL D T + LG
Sbjct: 664 LLALSSMKSLCSLNMNSTKLSADTYEDLK--AKLPNLKEVDVRYTEAWLG 711
>gi|297171918|gb|ADI22905.1| hypothetical protein [uncultured Rhizobium sp. HF0500_35F13]
Length = 307
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
L+LS+T G+ + L L++L LSGT+I D S +S + L + S G
Sbjct: 75 LDLSDTSVGDDGM-VHINKLEGLQVLVLSGTEITDAGFSQLSNLSDLNQLTASELMGDG- 132
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
++ AL + L L++ QV+D+ L LS K L L+L ++TD
Sbjct: 133 ------------TMAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRTAITDK 180
Query: 242 SLHQLSSLSKLTNLSIRDAVLTN 264
L L S++ L +L + + +T+
Sbjct: 181 GLEHLQSITVLQDLQLNNTKITD 203
>gi|84043404|ref|XP_951492.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348240|gb|AAQ15567.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358736|gb|AAX79191.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1394
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 15 VTKLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
V L NI +LE L+L CT ID+ + N L + L+GT NE L + +++S
Sbjct: 477 VEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVS 536
Query: 74 FLDVSNS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
L++S+ ++ ++ ++AL L+LS+ C G N A
Sbjct: 537 -LNLSHCWKMTNVSHISSLEALNELNLSN------------CFGIN-------------A 570
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 192
G + L L + LS T I D IS+ S +L +D+S F ++
Sbjct: 571 GWEAIE-KLQQLHVAILSNTHITDRNISHFSKCKNLVTLDLS------FCNKL------- 616
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L +TAL N+ LE LNL+ L L L L+++ L D + L + L
Sbjct: 617 LDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGGSL 676
Query: 253 TNLSIRDAVLTNSGLGSFKPPR---SLKLLDLH 282
+S+ D +G G P +L+ L+LH
Sbjct: 677 VKVSLDDC----AGFGDVTPLSNLVTLEELNLH 705
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 118/295 (40%), Gaps = 67/295 (22%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCT-------------------------IDSILE 39
LSF N VT L NI++LE LNL +C+ DS++
Sbjct: 610 LSFCN-KLLDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIV 668
Query: 40 GNENKAPLAKISL---AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 96
N L K+SL AG + + +E L + D S + L Q++ L
Sbjct: 669 SLGNGGSLVKVSLDDCAGFGDVTPLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVL-- 726
Query: 97 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA------------------ 138
DL + + ++S+E + L +LNLS+ + ++ I +
Sbjct: 727 -DLGRTQVDNNSLENICTSSIPLVSLNLSHCKKITSISSIASLTALEELNIDNSCNVTSG 785
Query: 139 ----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
G L L + +LS T+I+D I Y+S SL ++++ F + + TD
Sbjct: 786 WNVFGTLHQLRVATLSNTRINDENIRYVSECKSLNTLNLA------FCKDI---TD---- 832
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+TAL + LE LNL+ + L T + LS++ + D Q S L
Sbjct: 833 VTALSKITMLEELNLDCCPNIRKGIETLGTLPKAGILSMKECYMGDSDAQQCSIL 887
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 52/291 (17%)
Query: 11 AWTGVTKLPNISSLECL---NLSNC-TIDSILEGNENKAPLAKISLAGTTFINEREAFLY 66
W +T + +ISSLE L NLSNC I++ E E L +++ T I +R +
Sbjct: 542 CWK-MTNVSHISSLEALNELNLSNCFGINAGWEAIEKLQQL-HVAILSNTHITDRNISHF 599
Query: 67 IETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
+ L LD+S FC L + AL ++ L LNL
Sbjct: 600 SKCKNLVTLDLS------FCNKLLDVTALSNI-------------------TTLEELNLD 634
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
+ G+ +L G LP L +L++ G Q++D I + SL + +S D GF V
Sbjct: 635 SCSNIRKGLSVL-GELPRLCVLNIKGVQLEDSVIVSLGNGGSL--VKVSLDDCAGF-GDV 690
Query: 186 GAETDLVL--------------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFK-ELIH 230
++LV + L L L L+L +TQV + +L + T L+
Sbjct: 691 TPLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDLGRTQVDNNSLENICTSSIPLVS 750
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L+L + S+ ++SL+ L L+I ++ SG F L++ L
Sbjct: 751 LNLSHCKKI-TSISSIASLTALEELNIDNSCNVTSGWNVFGTLHQLRVATL 800
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
+ LNL+ R + G+G++ LP L +L + + + ++ + L + + N
Sbjct: 344 IEELNLNGCRRITRGIGVVWA-LPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNC-- 400
Query: 179 KGF----------------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 222
GF IQ+ D++ + +L L +L LN+++ +S +
Sbjct: 401 AGFGDMTLLSSIVTLEELNIQKCA---DIISGVGSLGTLPYLRVLNIKEAHISSLDFTGI 457
Query: 223 STFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
K L+ L++ + + L DV L+++ L LS+ ++G+G LK+LDL
Sbjct: 458 GASKSLLQLNMESITGLIDV--EALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDL 515
Query: 282 HG 283
G
Sbjct: 516 SG 517
>gi|85679220|gb|ABC72026.1| InlA [Listeria monocytogenes]
Length = 794
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 190
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 191 SF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDI 243
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 244 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 297
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 298 ELKLGANQISNISPLAGLAALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 354
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 355 -PVSSLTKLQRL 365
>gi|254411888|ref|ZP_05025664.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181610|gb|EDX76598.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 415
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDL 191
L NLE L L G QI D I ++ + +LK++ + I + ++ E +
Sbjct: 93 ELTNLESLHLDGNQITD--ICPLTELTNLKYLTLRRNQITDICPLTELTNLTELSLEGNQ 150
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+ + +L L +LE LNLE Q++ T+ PL+ + L L L + +TD+S L+ L
Sbjct: 151 IADVNSLAELTNLEFLNLENNQIT--TISPLAELQNLKRLHLEDNQITDIS--SLAGLQN 206
Query: 252 LTNLSIRDAVLTN-SGLGSFKPPRSLKLL 279
LT L + D +T+ S L F + L L+
Sbjct: 207 LTWLHLEDNQITDISPLSEFTNLKGLFLV 235
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 33/172 (19%)
Query: 88 LTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
L+Q+ L+ L+L + I D S E+ NL L+L + + + + L+G L NL
Sbjct: 245 LSQLTNLKALELKFNQIQDISPLAEL-----QNLTWLDLEDNQITD--ISPLSG-LTNLT 296
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
LSL+ QI D +S +S + +LK + ++ I+ ++ L L +LE
Sbjct: 297 FLSLTYNQIQD--VSPLSGLTNLKRLQLNFNQIQ--------------DISPLAELTNLE 340
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L+L Q++D + PLS + L LSL +TD+ S LS LTNL +
Sbjct: 341 TLSLNGNQITDVS--PLSGLQNLNALSLNGNQITDI-----SPLSGLTNLKV 385
>gi|195326537|ref|XP_002029985.1| GM24816 [Drosophila sechellia]
gi|194118928|gb|EDW40971.1| GM24816 [Drosophila sechellia]
Length = 534
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 22/277 (7%)
Query: 21 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 80
++LE N S I +++E N K + K+ T N +E E + L FL +SN+
Sbjct: 145 FANLEYANFSENLI-AVIEPNAFKH-MKKLRFLDLT-TNYQENITLGENANLLFLSISNN 201
Query: 81 SLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGIL 137
+L F C + LE L L S+ + + + + NLR LN+SN F +
Sbjct: 202 NLRDFQWCHFRGLPKLEELHLHSNWLEHLDMGIFYAL-PNLRVLNVSNNNLFEIKRTLFM 260
Query: 138 A-GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKFI--DISNTDIKGFIQ-------Q 184
A G + L++L S + DD + + +L I+ + F+
Sbjct: 261 APGEVAPLDLLDYSSNNVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLH 320
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL--FPLSTFKELIHLSLRNASLTDVS 242
+ VL NL LE+L+L + + L F ++LI+L L N + D+
Sbjct: 321 LQGNKISVLPDDVFANLTDLEKLDLSKNNIKKLGLRVFGERILRKLIYLDLSNNYIADLH 380
Query: 243 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 279
LSS+ + L +R L + L F P R L+LL
Sbjct: 381 PLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLL 417
>gi|402587047|gb|EJW80983.1| hypothetical protein WUBG_08107 [Wuchereria bancrofti]
Length = 584
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 55 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMV 112
I E ++ + L LD+ + +S L ++K L+ L LS + I +
Sbjct: 71 NNIIKRIEPIMFKDLDRLEVLDLGGNKISSIVAGELDRLKDLDTLILSDNQISNIEDGAF 130
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
A + NLR LNL+N + + G G L NLE L+L I + + + +LK+++
Sbjct: 131 ASLN-NLRTLNLANNKLMNISAGTFRG-LNNLETLNLQSNNILYVNWNAFAHLKNLKYLN 188
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+ N I S L+ L LE+L + + L + L LS
Sbjct: 189 LGNNHI---------------SRVDLRGLKSLEKLFVNNNSIQSMKNITLRDLRNLALLS 233
Query: 233 LRNASLTDV---SLHQLSSLSKLTNLSI 257
L S+T+V LH L +L+ SI
Sbjct: 234 LDRNSVTEVLNGDLHSLGESGRLSTFSI 261
>gi|383863025|ref|XP_003706983.1| PREDICTED: uncharacterized protein LOC100883969 [Megachile
rotundata]
Length = 709
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 71 LLSFLDVSNSSLSR-FCFLTQMK-----ALEHLDLSSSMIGDDS-VEMVACVGANLRNLN 123
+L F D+S +L F T +K A +S ++ D++ V+ ++ NL+ L+
Sbjct: 116 VLFFCDLSEKALVEIFKCCTSLKILRIHACRECLMSGRLLEDENDVKELSETFKNLQELS 175
Query: 124 LS-NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT-----D 177
L N S A L PN+E LSL G QI + Y P D S + +
Sbjct: 176 LGYNRELSDALFNRLVATCPNIESLSLMGCQISFHCGLYKKFYPQNMLPDASQSVLTFLN 235
Query: 178 IKGFIQQVGAETD------LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL--- 228
+ +I+Q + ++ TAL L+ LE L LE + + K L
Sbjct: 236 VLHYIRQQAYKLQRLSLGFTLIDGTALATLSALEGLKLESLMLQGCYQLTVQGIKGLTQY 295
Query: 229 -IHLSLRNAS----LTDVS-LHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDL 281
+L + + S +TD S LH ++L+KL L I R +T+SG+ + ++LK LD+
Sbjct: 296 QTYLKVLDISFCVRITDASLLHICNNLTKLETLRIKRCRAVTDSGVNYIRLLKNLKELDI 355
Query: 282 HGGWLLTEDAI 292
LLT + I
Sbjct: 356 SENELLTGNCI 366
>gi|219821381|gb|ACL37832.1| internalin A [Listeria monocytogenes]
gi|219821384|gb|ACL37834.1| internalin A [Listeria monocytogenes]
Length = 741
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 77 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 133
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 134 SF----GNQVTDLKPLANLTTLERLDISSNKLSD--ISVLAKL-TNLESLIATNNQISDI 186
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 187 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 240
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 241 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 297
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 298 -PVSSLTKLQRL 308
>gi|260788598|ref|XP_002589336.1| hypothetical protein BRAFLDRAFT_77788 [Branchiostoma floridae]
gi|229274513|gb|EEN45347.1| hypothetical protein BRAFLDRAFT_77788 [Branchiostoma floridae]
Length = 1470
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 72 LSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVA-CVGA--NLRNLNLSNT 127
L +++S++ LS R FL + +LE +DLS + I D++V +A +G+ NL+ +NLS+
Sbjct: 1150 LKKVNLSHNKLSGRGDFLPPLPSLEEIDLSYNAISDEAVPGLAEGLGSCQNLKKVNLSHN 1209
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAI----SYMSMMPSLKFIDISN---TDIKG 180
+ S G + LPNLE + LS I D A+ + +LK +D+S+ +D
Sbjct: 1210 KLSDRGDFLPP--LPNLEEIDLSHNIISDEAVPGLAGSLGSCQNLKKVDLSHNKLSDRGH 1267
Query: 181 FI-------------QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS--TF 225
F+ +G E + L+ L + L+++NL ++SD +
Sbjct: 1268 FLPPLPNLEEIDLSYNAIGDEAEPGLA-EGLGSCQKLKKVNLSHNKLSDVGELTAAFIDL 1326
Query: 226 KELIHLSLRNASLTDVSLHQLSSLSKL 252
L H+ + N S +D SL +++ K+
Sbjct: 1327 PFLTHVDIYNNSFSDESLPTIAAWLKV 1353
>gi|195118533|ref|XP_002003791.1| GI21160 [Drosophila mojavensis]
gi|193914366|gb|EDW13233.1| GI21160 [Drosophila mojavensis]
Length = 1231
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHL---DLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
L L +S + L+ C L++++ + HL L + + V+ V + + LR LNLS+ R
Sbjct: 234 LKVLKLSGNGLADNCSLSELQHMNHLLELHLDRNGLHALPVQFVQHL-SELRLLNLSHNR 292
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 188
G L LE L LSG Q+ L+ +D+SN + F
Sbjct: 293 LIELPRNTFEGAL-QLESLHLSGNQLTVLPFQLFQTARELRHLDLSNNRLLSF------- 344
Query: 189 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 248
D +L + L +L L++ Q+ L ++L HL L L + S
Sbjct: 345 PDNFFALNS-----QLRQLLLQKNQLKSIGKHSLYNLRQLRHLDLSQNELGSIDRKAFES 399
Query: 249 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
L +L L+I LT F+P SL+ LDL
Sbjct: 400 LERLVTLNISGNELTVLSSIIFQPLGSLQQLDL 432
>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 629
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 104/247 (42%), Gaps = 18/247 (7%)
Query: 14 GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
G L +L+ LN SN I D+ + G + A L +++LAG L TSL
Sbjct: 278 GALALATSGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNMIGPAGARALRCNTSL- 336
Query: 73 SFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+ LD+S + L L ++L L+L + IGDD E +A L++LNLS
Sbjct: 337 TELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALA-RNTTLKSLNLSYNPIG 395
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
G G L G L L L ID Y S ++ SL + + + I GA
Sbjct: 396 FWGAGALGGST-TLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIG----DSGAR-- 448
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
A+ L L+L + + DA L+ L L+L + D L+
Sbjct: 449 ------AIATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHP 502
Query: 251 KLTNLSI 257
+LT+L++
Sbjct: 503 RLTSLNL 509
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 33/271 (12%)
Query: 23 SLECLNLSNCTIDSILEGNENKA-----PLAKISLAGTTFINEREAFLYIETSLLSFLDV 77
+E L++S CT + N A PL +SL G E L TSL S L +
Sbjct: 166 GVEHLDISRCTGSGV--SNAGLALLATRPLKSLSLNGIEIDAEGARLLATCTSLTS-LSL 222
Query: 78 SNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ S+ L + +++ LDLS +MIG D +A GA L +LNL N G
Sbjct: 223 TGCSIGDRAATALARSRSIASLDLSVNMIGPDGARALA--GAPLASLNLHNNGIGDEGAL 280
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID---ISNTDIKG-FIQQVGAETDL 191
LA L+ L+ S I D + L F D ++ ++ G I GA
Sbjct: 281 ALATS-GTLKSLNASNNGIGDAGV--------LGFADNAVLTQLNLAGNMIGPAGAR--- 328
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
AL+ L L+L ++ DA L+ + L L+LR+ + D L+ +
Sbjct: 329 -----ALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTT 383
Query: 252 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
L +L++ + G G+ +L+ LDL
Sbjct: 384 LKSLNLSYNPIGFWGAGALGGSTTLRELDLR 414
>gi|242057763|ref|XP_002458027.1| hypothetical protein SORBIDRAFT_03g025650 [Sorghum bicolor]
gi|241930002|gb|EES03147.1| hypothetical protein SORBIDRAFT_03g025650 [Sorghum bicolor]
Length = 949
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLE 145
L + LE+LDLS +++G ++V++ +G+ NL LNLS+T FS V G+L L+
Sbjct: 114 LLALHHLEYLDLSGNLLGGEAVQIPRFLGSLPNLVYLNLSSTDFSGR-VPPHLGNLSKLQ 172
Query: 146 ILSLSGTQIDDYA------ISYMSMMPSLKFIDIS--NTDIKG-FIQQVGAETDL-VLSL 195
L + T D+ IS+++ +P L F+D+S N I G ++Q + ++L VL L
Sbjct: 173 YLDIDTTWNDEENNMHSEDISWLARLPLLVFLDMSGVNLSITGDWVQVLNKLSNLRVLRL 232
Query: 196 TALQ-----------NLNHLERLNLEQTQVSDATLFPLSTFKE---LIHLSLRN 235
A Q NL LE ++L +++ TL P F + HL L N
Sbjct: 233 HACQLPFPYPAIVDSNLTSLEIVDLSDNRIN--TLNPSYWFWHASTIRHLDLMN 284
>gi|22347568|gb|AAM95929.1| internalin A precursor [Listeria monocytogenes]
Length = 743
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 79 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 135
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 136 SF----GNQVTDLKPLANLTTLERLDISSNKLSD--ISVLAKL-TNLESLIATNNQISDI 188
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 189 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 242
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 243 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 299
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 300 -PVSSLTKLQRL 310
>gi|348672385|gb|EGZ12205.1| hypothetical protein PHYSODRAFT_317416 [Phytophthora sojae]
Length = 821
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 104 IGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYM 162
IGDDS+ ++ G N+ LNL R +S +GV +A L +SLSG I +
Sbjct: 334 IGDDSLVLIGKHGGNISKLNLKGLRKASDSGVMEIAKGCAVLTSISLSGRNITAQTFKLL 393
Query: 163 -SMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLF 220
M L+ +D+S + ++ G +LV + + + + L R++L T V D +
Sbjct: 394 GKMCRKLRVLDVSE---RHDLETPGCFMNLVSTTASGIHPPHPLRRIDLSGTNVCDIGVS 450
Query: 221 PLSTFK---ELIHLSLRNASLTDVSLHQLSSLS-KLTNL------SIRDAVLTNSGLGSF 270
L+ E I+LS + A +TD + L+S S +L L I D LT L
Sbjct: 451 VLAAACRQLEWINLS-KCAQITDFATEALASRSFQLKVLLLANTRGITDRSLT--ALAFT 507
Query: 271 KPPRSLKLLDLHGGWLLTEDAILQFC 296
K P L++LDL G +T++ +L C
Sbjct: 508 KIP--LEILDLSGNTRVTDEGLLALC 531
>gi|319881513|gb|ADV75083.1| TLR2B [Falco naumanni]
Length = 399
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 31/160 (19%)
Query: 70 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 125
SL++ L V N+ + C L++ + +L++LDLS++++GD S+E AC G +L+ LNLS
Sbjct: 99 SLVTKLTVENTKVFLVPCQLSKHLLSLQYLDLSANLLGDPSLEHSACKGGWPSLQTLNLS 158
Query: 126 NTRFSSAGVG----------ILA-------GHLP-------NLEILSLSGTQIDDYAISY 161
S + IL G +P NL+ L+LS TQI +
Sbjct: 159 QNSLSDLEITSKSLSHLRNLILLDISQNNFGEMPDICEWPXNLKYLNLSSTQISEVT--- 215
Query: 162 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
+ P+L+ +D S +++GF Q+ +L L+ L+ L
Sbjct: 216 ACIPPTLEVLDXSANNLRGFELQLPFLKELYLTKNQLKTL 255
>gi|83629787|gb|ABC26555.1| internalin C2 [Listeria monocytogenes]
gi|83629789|gb|ABC26556.1| internalin C2 [Listeria monocytogenes]
gi|83629795|gb|ABC26559.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 128/264 (48%), Gaps = 44/264 (16%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 60
+FP L+ N T K N+++ + L+G +A +S A T +
Sbjct: 46 IFPDLALANAVKTATGKS---------NVTDAVTQADLDG------IATLS-AFNTGVTT 89
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
E Y+ L L++ ++ ++ L + + L+LS + + +V +A + + ++
Sbjct: 90 IEGIQYLNN--LIGLELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IK 144
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
L+L++T+ + V LAG L NL++L L QI D +S ++ + +L+++ I N +
Sbjct: 145 TLDLTSTQITD--VAPLAG-LSNLQVLYLDLNQITD--LSPLAGLTNLQYLSIGNNQVN- 198
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
LT L NL+ L L + ++SD + PL++ LI + L++ ++D
Sbjct: 199 -------------DLTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISD 243
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTN 264
VS L++LS L +++ + +TN
Sbjct: 244 VS--PLANLSNLFIVTLTNQTITN 265
>gi|85679240|gb|ABC72036.1| InlA [Listeria monocytogenes]
Length = 794
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 134 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 190
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D + ++A + NL +L +N + S
Sbjct: 191 SF----GNQVTDLKPLANLTTLERLDISSNKLSD--ISVLAKL-TNLESLIATNNQISDI 243
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 244 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 297
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 298 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 354
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 355 -PVSSLTKLQRL 365
>gi|395842297|ref|XP_003793954.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Otolemur garnettii]
Length = 1149
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 92 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 151
+ALE+LDLSS++I + ++ + L+ LNLSN R ++ G +L ++ L+
Sbjct: 276 RALENLDLSSNIISE--IKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNR 333
Query: 152 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 211
+I +P L+F+++ IK +V LT Q L+ L L +++
Sbjct: 334 NRISMIPPKIFK-LPHLQFLELKRNRIK-----------IVEGLT-FQGLDSLRSLKMQR 380
Query: 212 TQVS---DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
+S D F L+ +E L L LT + LS L L++ D +T+ G
Sbjct: 381 NGISKLKDGAFFGLNNMEE---LDLSYNQLTRLDESAFVGLSLLEKLNLGDNRVTHIADG 437
Query: 269 SFKPPRSLKLLDLHGG---WLLTEDAILQFCKM 298
F+ +L+ LDL W + EDA F +
Sbjct: 438 VFRFLSNLQALDLRNNEISWAI-EDASEAFAGL 469
>gi|290980890|ref|XP_002673164.1| predicted protein [Naegleria gruberi]
gi|284086746|gb|EFC40420.1| predicted protein [Naegleria gruberi]
Length = 287
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+++M L LD+ ++ I + + + + LR L +S T+ S G ++G LPNL L
Sbjct: 85 ISKMDQLTELDIGTNKIDEKGAQYIGEM-KQLRKLFISGTQIGSEGAKAISG-LPNLTNL 142
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 207
++ +QI Y+ M L + I N+ ++G ET ++ L HL L
Sbjct: 143 NIGYSQIGIEGAKYVCGMHQLTQLGIGNS-------RIGVETAKLIG-----QLKHLTFL 190
Query: 208 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTD------VSLHQLS-------------- 247
+E + D +S K L L + N + LHQL+
Sbjct: 191 VIEGNNIGDEGAKYISEAK-LKKLVISNGRIGGEGAQYIAKLHQLTNLDISCNNVDTAGA 249
Query: 248 -SLSKLTNLSIRDAVLTNSGLGSFKPPRSL 276
S+SKL NL+I D + G G + + +
Sbjct: 250 RSISKLPNLTILDISVNKIGSGGARLIKGM 279
>gi|196229524|ref|ZP_03128389.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
gi|196226756|gb|EDY21261.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
Length = 472
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 26/243 (10%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLL 72
G L + L+ L +S +I S + N + L +SL GT + A L T L
Sbjct: 235 GFAHLVDCHGLKSLYVSGFSILSGMVENIARCKNLETLSLLGTELKDAGIAPLSALTKLH 294
Query: 73 SFLDVSNSSLSRFCFLTQ--MKALEHLDLSSSMIGDDSV-EMVACVGANLRNLN--LSNT 127
S LD S S +S F L L+L + DD++ + + L LN L+++
Sbjct: 295 S-LDCSGSGVSGTAFAAWPVRSQLTSLNLDRTPGVDDAICKNIEHAFPKLEYLNVKLADS 353
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQV 185
F+ AG GILA L +L L+L G I+D ++ ++ +L + I + KG +
Sbjct: 354 GFTPAGAGILA-RLHSLHTLNLGGAGINDEVVAQLARNDALNMLAIPMAQLSEKGVV--- 409
Query: 186 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN--ASLTDVSL 243
AL + HL L+L V+DA + + KEL L++ AS T++ L
Sbjct: 410 -----------ALAKIPHLNELSLNVPPVTDAAVKAFARCKELKTLNIGKDAASDTELKL 458
Query: 244 HQL 246
H++
Sbjct: 459 HKV 461
>gi|29423725|gb|AAO73556.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+
Sbjct: 146 LANLTTLERLDISSNKLSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDE 198
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 199 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 256
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 257 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 309
>gi|410904749|ref|XP_003965854.1| PREDICTED: leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein
1-like [Takifugu rubripes]
Length = 604
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 109 VEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
+E+ A G NLR L L N R VG+ +G L L L LS +I
Sbjct: 95 IEVEAFQGLQNLRTLRLKNNRLKIIPVGVFSG-LSGLRFLDLSQNEI------------- 140
Query: 168 LKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L F+D + ++ + E DLV +S A L++L+ LN++++ ++ LS +
Sbjct: 141 LVFLDYTFKEMTSLQRLQAEENDLVFISQRAFFGLHNLQELNIDRSNLTSVPTEALSQLQ 200
Query: 227 ELIHLSLRNASLTDV------SLHQLSSLSKLTNLSIRDAVLTNSGLG 268
L L + +++ + LH+L SL ++TN D V +NS +G
Sbjct: 201 SLTRLRMLRLTISTLPNNAFRRLHRLRSL-QITNWPALDTVASNSLIG 247
>gi|242078575|ref|XP_002444056.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
gi|241940406|gb|EES13551.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
Length = 1010
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLE 145
L ++ LEH+DLSS+ + + +G+ N++ LNLS F + GV G+L NL+
Sbjct: 105 LLSLEYLEHMDLSSNSLTGPHGCIPQFLGSMKNMKYLNLSGIPF-TGGVAPQLGNLSNLQ 163
Query: 146 ILSLSGTQIDDYA--ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL-------- 195
L L G Q Y+ I++++ +P L+++D+S ++ G I + ++V SL
Sbjct: 164 YLDL-GRQYYLYSADITWLTNLPLLQYLDMSYVNLSG-IADWPQKLNMVPSLRVIRLTSC 221
Query: 196 ---TALQNLNHLERLNLEQTQVS 215
T Q+L+H NLE+ +S
Sbjct: 222 SLDTTNQSLSHFNLTNLEKLDLS 244
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 43/309 (13%)
Query: 3 PRLSFLNLAW---TGVTKLPN----ISSLECLNLSNCTIDSILEG--NENKAPLAKISLA 53
P L +L++++ +G+ P + SL + L++C++D+ + + N L K+ L+
Sbjct: 185 PLLQYLDMSYVNLSGIADWPQKLNMVPSLRVIRLTSCSLDTTNQSLSHFNLTNLEKLDLS 244
Query: 54 GTTFINE-REAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSS------SMI 104
F + ++ + + + L +L++ N L L M L LDLS+ ++
Sbjct: 245 LNNFNHPIVSSWWFWKPTGLKYLNLHNIGLIGHLQDSLENMTLLRVLDLSNNYQNCLALT 304
Query: 105 GDDS----VEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLP-----NLEILSLSGTQ 153
G S EM+ + +L L+LS + S + I G LP L+ L+L
Sbjct: 305 GSPSNLCTFEMIGNLNNLCSLEILDLS-YNYMSGDMTIFTGRLPQCSWDKLQHLNLDSNN 363
Query: 154 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 213
+ + + SL + ISN ++ G I L N HL L+L +
Sbjct: 364 LTGTLPNLIGHFISLSVLVISNNNLTGTIP------------AGLGNCTHLTILDLYCNK 411
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKP 272
+S + + + +L L LRN +L+ Q+ S LT L + + L+ + F+
Sbjct: 412 ISGSVPTEIGSLSKLTSLDLRNNNLSGGVPTQIGGCSNLTFLDVSNNYLSGVIMEEHFEG 471
Query: 273 PRSLKLLDL 281
SLK LDL
Sbjct: 472 LISLKKLDL 480
>gi|357501759|ref|XP_003621168.1| Receptor protein kinase-like protein [Medicago truncatula]
gi|355496183|gb|AES77386.1| Receptor protein kinase-like protein [Medicago truncatula]
Length = 868
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 70 SLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLS 125
S L LD+SN+ L L + L HLDLS++ +G E+ +G L L++S
Sbjct: 135 SKLIHLDLSNNRLGGEVPPSLGNLSNLTHLDLSNNFLGG---EIPPSIGNLKQLEYLHIS 191
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI-QQ 184
T + + + G L NL L LS +I + + L+++DIS +I+G I +
Sbjct: 192 ET-YIQGSIPLELGFLKNLTRLDLSKNRIKGEIPPSLGNLKKLEYLDISYNNIQGSIPHE 250
Query: 185 VGAETDLV-LSL----------TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
+G +LV L L T++ NL LE L++ ++ + + +L L L
Sbjct: 251 LGIIKNLVGLYLSDNRLNGSLPTSITNLTQLEELDISDNFLTGSLPYNFHQLTKLHVLLL 310
Query: 234 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
N S+ L++LS+L L I D LT S
Sbjct: 311 SNNSIGGTFPISLTNLSQLQVLDISDNFLTGS 342
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 148
+ L HLDLS++ +G E+ +G + L +L+LSN R V G+L NL L
Sbjct: 110 LSKLTHLDLSNNFLGG---ELPPSLGNLSKLIHLDLSNNRLGGE-VPPSLGNLSNLTHLD 165
Query: 149 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 208
LS + + + L+++ IS T I+G I L L L+NL RL+
Sbjct: 166 LSNNFLGGEIPPSIGNLKQLEYLHISETYIQGSIP---------LELGFLKNL---TRLD 213
Query: 209 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L + ++ L K+L +L + ++ H+L + L L + D L S
Sbjct: 214 LSKNRIKGEIPPSLGNLKKLEYLDISYNNIQGSIPHELGIIKNLVGLYLSDNRLNGS 270
>gi|283778672|ref|YP_003369427.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
gi|283437125|gb|ADB15567.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
Length = 450
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
FL + S L + LE+L L I D ++ + L +L L T + AG
Sbjct: 233 FLGSTKLSGGGLATLAPLVDLEYLSLKQLPIDDRDLQELPEF-PKLMSLGLDFTEVTDAG 291
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
+ L L+ L L T++ D + ++ + +L+ + + T +KG
Sbjct: 292 LTKLP-KFAMLDTLWLDATRVTDEGMLEVAKISTLRSLFMPATQVKGP------------ 338
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+ L L L L+L+ Q+ D L L + + L L + ++TD + QL +++L
Sbjct: 339 GFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHTNVTDKQIEQLVGMTRLK 398
Query: 254 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
L + +T+ + S RSL+ + LHG
Sbjct: 399 TLWLSKTAVTDGAIESLSKIRSLQTVYLHG 428
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 33/184 (17%)
Query: 2 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
FP+L L L +T G+TKLP + L+ L L + +E +AKIS
Sbjct: 274 FPKLMSLGLDFTEVTDAGLTKLPKFAMLDTLWLDATRVT-----DEGMLEVAKIS----- 323
Query: 57 FINEREAFLYIETSLLS-FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 115
+L S F+ + F L ++ +L +L L + D V + V
Sbjct: 324 -------------TLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQL--DDVALQHLV 368
Query: 116 G-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
G N+ L L +T + + L G + L+ L LS T + D AI +S + SL+ + +
Sbjct: 369 GLENIEILGLDHTNVTDKQIEQLVG-MTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLH 427
Query: 175 NTDI 178
+++
Sbjct: 428 GSEV 431
>gi|290975616|ref|XP_002670538.1| predicted protein [Naegleria gruberi]
gi|284084098|gb|EFC37794.1| predicted protein [Naegleria gruberi]
Length = 333
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
C L Q+K LE L+LS IG++ + ++ L L++ G+ ++ +L
Sbjct: 4 ICKLNQLKILE-LELSD--IGNEQLIQISQSMKQLTKLSVGFNDIGGEGLKLIKELSNSL 60
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
IL++ QI + + +S + L +DIS I F ++ NLN L
Sbjct: 61 TILNIEHNQIGNEGLELLSGLTRLDSLDISTNKIDKF--------------NSICNLNQL 106
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
LN+ V + + +S K L L +++ ++ + + + L LTN +I + + N
Sbjct: 107 TILNVSNNIVGNEGVKFISKLKHLTELVMQSCNVKEEGMKSICELKNLTNFNISNNFIRN 166
Query: 265 SGL 267
G+
Sbjct: 167 EGM 169
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 111/233 (47%), Gaps = 18/233 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L D+ N L + MK L L + + IG + ++++ + +L LN+ + + +
Sbjct: 15 LELSDIGNEQLIQIS--QSMKQLTKLSVGFNDIGGEGLKLIKELSNSLTILNIEHNQIGN 72
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGA 187
G+ +L+G L L+ L +S +ID + + + + L +++SN + FI ++
Sbjct: 73 EGLELLSG-LTRLDSLDISTNKIDKF--NSICNLNQLTILNVSNNIVGNEGVKFISKLKH 129
Query: 188 ETDLVL--------SLTALQNLNHLERLNLEQTQV-SDATLFPLSTFKELIHLSLRNASL 238
T+LV+ + ++ L +L N+ + ++ + ++F L L + +
Sbjct: 130 LTELVMQSCNVKEEGMKSICELKNLTNFNISNNFIRNEGMILICNSFPLLKCLRASSNKI 189
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 291
++ + ++ L +LT+L+I ++N+G+ S + L LD+ G + E A
Sbjct: 190 SNEGVQDITKLERLTDLNICRNEISNNGMKSISGLKKLTCLDVSGNNISDEGA 242
>gi|224029487|gb|ACN33819.1| unknown [Zea mays]
gi|414878637|tpg|DAA55768.1| TPA: putative leucine-rich repeat receptor-like protein kinase
family protein [Zea mays]
Length = 1043
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 26/240 (10%)
Query: 38 LEGNENKAPLAK--------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR----F 85
L GN PL + L+G F L + LL L+VS + LS
Sbjct: 159 LTGNAFSGPLPPAFPRTLRFLVLSGNQFSGPVPEGLASGSPLLLHLNVSGNQLSGSPDFA 218
Query: 86 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
L ++ L LDLS ++ + +A + NL+ L+LS RF A V G P+L
Sbjct: 219 GALWPLERLRTLDLSHNLFSGPVTDGIARL-HNLKTLSLSGNRFFGA-VPADIGRCPHLS 276
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
+ LS D + + + SL ++ S + G D+ L L + HL+
Sbjct: 277 TIDLSSNAFDGHLPDSIGQLASLVYLSASGNRLSG---------DVPAWLGKLAAVQHLD 327
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
L ++ + L K L +LSL L+ +S +KL L +RD L+ S
Sbjct: 328 ---LSDNALTGSLPDSLGDLKALKYLSLSRNQLSGAVPASMSGCTKLAELHLRDNNLSGS 384
>gi|395542522|ref|XP_003773178.1| PREDICTED: toll-like receptor 2 [Sarcophilus harrisii]
Length = 783
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSS-AGVGILAGHLPNLEIL 147
+K+LE+ DLS S++ ++++E AC GA L LNLS +F+S VG + + L L
Sbjct: 357 LKSLEYFDLSDSLMSENALENSACDGAWPTLHTLNLSQNKFTSLETVGEILQTVETLTHL 416
Query: 148 SLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ------N 200
LS D ++ P LK+++IS T + +T +L ++ Q N
Sbjct: 417 DLSKNSFD--SMPDRCQWPRKLKYLNISRTKTY-MVTSCIPQTLEILDISNNQLSDFHLN 473
Query: 201 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
L HL+ L+L ++ TL + F L+ +++ ++ S QL S + +L+
Sbjct: 474 LPHLKELDLSGNKLK--TLPDAANFPNLVVMNISQNTVHSFSKAQLESFQMMESLA 527
>gi|270011063|gb|EFA07511.1| cys-loop ligand-gated ion channel subunit-like protein [Tribolium
castaneum]
Length = 1155
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L + L+ LDLSS+ + S+E + G NL ++LS+ + V LP L+I
Sbjct: 136 LKPLPELDRLDLSSNKL--KSLEATSFKGLRNLSFIDLSDNMLTKI-VPNTFDDLPQLKI 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET--------DLVLS---- 194
L L G ++ I+ ++ + +++ ID+S ++ G +G +T D+ LS
Sbjct: 193 LRLRGNRLTIQTITKLNPLRTVEEIDLSGNNLVG---PLGPKTFPKMENLRDIQLSHNSL 249
Query: 195 ----LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+ ALQ LN L L+L+ Q+ S L+ L L + + VS L+ L+
Sbjct: 250 SSIKMGALQGLNKLTSLSLQHNQIDVLEDHAFSHLTSLVSLVLAHNRIVAVSGASLAHLN 309
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
KLT+L +R L P +SLK L L
Sbjct: 310 KLTDLDLRFNFLRALTADLILPLKSLKNLKL 340
>gi|46447466|ref|YP_008831.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401107|emb|CAF24556.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 456
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 195 LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 252
L AL+N +L+ L+L++ +DA L L+ L HL L +TD L LS L L
Sbjct: 241 LLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGLAHLSPLVAL 300
Query: 253 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 306
+L++ LT++GL KP +LK LDL W LT+ + + P + + H
Sbjct: 301 QHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGL---AHLRPLVALQH 351
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 27/253 (10%)
Query: 66 YIETSLLSFLDVSNSSLSRFCFLTQM--KALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
Y+E +++S L +S L+ F + + +E L+ S++ D+ + NL+ L+
Sbjct: 195 YLELNVVSALLNQSSQLTEFEEILKYFSNEIEALNFSNNADLTDAHLLALKNCKNLKVLD 254
Query: 124 LSNT-RFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDI--K 179
L F+ AG+ L L L+ L L+G ++ D ++++S + +L+ +++ D+
Sbjct: 255 LQECWNFTDAGLAHLTP-LTALQHLDLTGCFRVTDTGLAHLSPLVALQHLNLIGCDLTDA 313
Query: 180 GFIQ-------------QVGAETDLVLS-LTALQNLNHLERLNLEQ-TQVSDATLFPLST 224
G + + TD L+ L L L HL N E T V A L PL
Sbjct: 314 GLVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLTNCENITDVGLAHLTPLVA 373
Query: 225 FKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLH 282
K HL L LT L +L SL L +L++ + LT++GL +P +L+ LDL
Sbjct: 374 LK---HLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAHLRPLVALQHLDLA 430
Query: 283 GGWLLTEDAILQF 295
+ LT+ + F
Sbjct: 431 NCYELTDAGLAHF 443
>gi|405754353|ref|YP_006677817.1| internalin C2 [Listeria monocytogenes SLCC2540]
gi|404223553|emb|CBY74915.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 548
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + +++ L+L++T+ + V
Sbjct: 103 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGL-QSIKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D +S ++ + +L+++ I N +
Sbjct: 158 APLAG-LSNLQVLYLDLNQITD--LSPLAGLTNLQYLSIGNNQVN--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 201 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|380016989|ref|XP_003692449.1| PREDICTED: LOW QUALITY PROTEIN: c-Maf-inducing protein-like [Apis
florea]
Length = 1031
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 150
+ +LE+L L+ + + E + + A LR+LNL T+F AG+ +++ HL L++L+L
Sbjct: 919 LGSLEYLSLAFTSVTSACAEQLIKLPA-LRHLNLWATQFGDAGLQMISEHLQKLQVLNLC 977
Query: 151 GTQIDDYAISYMSMMPSLKFIDISNTDI 178
T + D IS + + SL+ +++++T +
Sbjct: 978 ETPVSDKGISTLVSLTSLRKLNLNSTKL 1005
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 72 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L +L ++ +S++ C L ++ AL HL+L ++ GD ++M++ L+ LNL T
Sbjct: 922 LEYLSLAFTSVTSACAEQLIKLPALRHLNLWATQFGDAGLQMISEHLQKLQVLNLCETPV 981
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTD 177
S G+ L L +L L+L+ T++ S +P+L+ D+ TD
Sbjct: 982 SDKGISTLVS-LTSLRKLNLNSTKLSVQTFESLKKCLPALQEFDVRYTD 1029
>gi|56797879|emb|CAH04901.1| internalin A [Listeria monocytogenes]
Length = 483
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 128/249 (51%), Gaps = 31/249 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 127 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 183
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 184 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 236
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 237 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 290
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 291 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 347
Query: 244 HQLSSLSKL 252
+SSL+KL
Sbjct: 348 -PVSSLTKL 355
>gi|167887269|gb|ACA09294.1| InlE [Listeria monocytogenes]
Length = 186
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L+LS + + D S
Sbjct: 3 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELELSGNPLKDVS---- 53
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 54 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 108
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 109 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 152
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 153 YLEENQISDV-----SPLAKLPNLSI--VTLTN 178
>gi|307103620|gb|EFN51879.1| hypothetical protein CHLNCDRAFT_54895 [Chlorella variabilis]
Length = 374
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 69 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
T+L +SN S L+ + LEHL+L S + + A LR+L+L N R
Sbjct: 127 TALTHLELISNHEASALAPLSALLQLEHLELDSCGLTAVPAHLSALT--RLRHLHLENNR 184
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF-----IDISNTDIKGFI- 182
G L+ LP L+ L LSG + + +P+L I+ +N + G+
Sbjct: 185 DLVGGWHHLSA-LPRLQNLILSGIANSADVAAELPELPALTRLSCYNINFANEAVGGWQS 243
Query: 183 --QQVGAETDLVLSLT------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
+ G ET + S + L +L L RL + +S L PLS ++L HL L
Sbjct: 244 LHRLTGLETLSLYSCSIHRLPEVLPHLTALTRLRIINDNLSG--LEPLSALQQLRHLELE 301
Query: 235 NASLTDVSLHQLSSLSKLTNLSI---RDAVLTNSG 266
N L V QLS L+ LT L + RD LT G
Sbjct: 302 NCRLGAVP-EQLSVLTALTWLGLAQNRD--LTGGG 333
>gi|158336627|ref|YP_001517801.1| internalin A protein [Acaryochloris marina MBIC11017]
gi|158306868|gb|ABW28485.1| internalin A protein [Acaryochloris marina MBIC11017]
Length = 627
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 32/213 (15%)
Query: 47 LAKISLAGTTFINEREAFLYIE-TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 105
L+ I+L+G + A Y++ T+ L+ + + +++S + FL+ +K L HLDLS++ I
Sbjct: 98 LSTIALSG----QDVTAASYLQPTTNLTTVYLKTTNISDYSFLSDLKNLTHLDLSNNQIA 153
Query: 106 DDSVEMVACVGANLRNL-NLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYM 162
D S +++L L++ +S + ++G L L L+L IDDY++ +
Sbjct: 154 DLSF---------IQDLKQLTSLGLASNKIVDISGLKDLTKLNTLNLRSNAIDDYSV--L 202
Query: 163 SMMPSLKFIDIS---NTDIKGFIQQVGAETDLVLS-------LTALQNLNHLERLNLEQT 212
+ L+ + +S TD+ F+Q + T L LS ++ L+NL L L+L
Sbjct: 203 LNLKELRQLTVSVREATDL-AFLQDLKDLTHLDLSYNHWISDISVLRNLPKLTHLDLGSN 261
Query: 213 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
Q+S+ + L ++L HLSL + ++DVS+ Q
Sbjct: 262 QISNIAV--LLDLQQLTHLSLSSNQISDVSVLQ 292
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L LDVS + ++ L ++ L HLD+SS+ + D SV L LN+S+
Sbjct: 297 LERLDVSANEIADIAILQNLQGLTHLDISSNEVSDISVLQDLTT---LTQLNVSSNEI-- 351
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAET 189
+L G L L L +S Q+ + IS + + SL +++S + +Q +
Sbjct: 352 IDYSVLQG-LTQLTSLDVSDNQMSE--ISDLQGLHSLTSLNLSYNQLSDISVLQDLKQLA 408
Query: 190 DLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
L LS + LQN L LNL TQ++D L L K LI L L + +TD+S
Sbjct: 409 TLNLSYNPVSDIAVLQNFKDLTTLNLSFTQITD--LSHLQDLKGLISLDLHSNQITDIS- 465
Query: 244 HQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKL 278
L L L L++ D L++ + L K SL L
Sbjct: 466 -ALQDLEGLYRLNVSDNQLSDIAALRKLKGLFSLNL 500
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 39/192 (20%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNL------NLSNT 127
L VS + FL +K L HLDLS + I D SV LRNL +L +
Sbjct: 211 LTVSVREATDLAFLQDLKDLTHLDLSYNHWISDISV---------LRNLPKLTHLDLGSN 261
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 187
+ S+ V + L L LSLS QI D +S + + L+ +D+S +I
Sbjct: 262 QISNIAVLL---DLQQLTHLSLSSNQISD--VSVLQTLQGLERLDVSANEIA-------- 308
Query: 188 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 247
+ LQNL L L++ +VSD ++ L L L++ + + D S+ L
Sbjct: 309 ------DIAILQNLQGLTHLDISSNEVSDISV--LQDLTTLTQLNVSSNEIIDYSV--LQ 358
Query: 248 SLSKLTNLSIRD 259
L++LT+L + D
Sbjct: 359 GLTQLTSLDVSD 370
>gi|260788568|ref|XP_002589321.1| hypothetical protein BRAFLDRAFT_77774 [Branchiostoma floridae]
gi|229274498|gb|EEN45332.1| hypothetical protein BRAFLDRAFT_77774 [Branchiostoma floridae]
Length = 1432
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 15 VTKLPNISSLEC--LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
V P+I+ L C NL++ I S+ E + L +I L+ +I++ F L
Sbjct: 1070 VKGFPSITILGCSYCNLTSKEILSLTEQLPDLRNLKEIDLS-HNYISDEAVFGLGSCQNL 1128
Query: 73 SFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVA---CVGANLRNLNLSNTR 128
+++S + LS R FL + +LE +DLS + I D++V +A L+ +NLS+ +
Sbjct: 1129 RKVNLSFNKLSDRGDFLPPLPSLEEIDLSHNAISDEAVPGLAEGLASCQKLKKVNLSHNK 1188
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 163
S G + + LPNLE + LS I D A+S ++
Sbjct: 1189 LSDRGDFLPS--LPNLEEIDLSHNAISDEAVSGLA 1221
>gi|254932488|ref|ZP_05265847.1| InlC2 [Listeria monocytogenes HPB2262]
gi|405748612|ref|YP_006672078.1| internalin C2 [Listeria monocytogenes ATCC 19117]
gi|417316568|ref|ZP_12103212.1| internalin H (LPXTG motif) [Listeria monocytogenes J1-220]
gi|424821999|ref|ZP_18247012.1| Internalin D [Listeria monocytogenes str. Scott A]
gi|126143311|gb|ABN80098.1| InlC2 [Listeria monocytogenes]
gi|293584044|gb|EFF96076.1| InlC2 [Listeria monocytogenes HPB2262]
gi|328476103|gb|EGF46812.1| internalin H (LPXTG motif) [Listeria monocytogenes J1-220]
gi|332310679|gb|EGJ23774.1| Internalin D [Listeria monocytogenes str. Scott A]
gi|404217812|emb|CBY69176.1| internalin C2 (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 548
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 103 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D +S ++ + +L+++ I N +
Sbjct: 158 APLAG-LSNLQVLYLDLNQITD--LSPLAGLTNLQYLSIGNNQVN--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 201 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|124009847|ref|ZP_01694515.1| possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Microscilla marina ATCC 23134]
gi|123984168|gb|EAY24529.1| possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Microscilla marina ATCC 23134]
Length = 552
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 29/259 (11%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA---PLAKISLAGTTFI 58
P+L L+L+ + K P I L+ NL + T+ + GN N A L + ++
Sbjct: 136 LPQLQELDLSELLMEKPPVIGKLD--NLKSLTMHNCGLGNNNLAFLKTLKNLRHVDFSYN 193
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 117
+ + S L+ V+N+ L L LE L L ++ I + D +E ++
Sbjct: 194 YLTDLSSFSSLSKLTSFYVANNHLPDLTSLKHFPQLEALQLQNNEIHELDGIEHLS---- 249
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 177
NLR+LNL HLP LE+LS+ ++D +S ++ + L+++D+S+
Sbjct: 250 NLRHLNLEGNLLDELDP---LQHLPQLELLSVKDNLVED--LSPIAQLTQLRYLDVSDN- 303
Query: 178 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
G L + L+NL LE L+L + + L FK+L L+L +
Sbjct: 304 --------GG-----LDIAPLKNLKSLETLDLYSGALDTEDILFLKDFKQLKRLNLDDND 350
Query: 238 LTDVSLHQLSSLSKLTNLS 256
L + L + ++ NLS
Sbjct: 351 LESLDLFKYMPQLQMLNLS 369
>gi|83629775|gb|ABC26549.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D +S ++ + +L+++ I N +
Sbjct: 157 APLAG-LSNLQVLYLDLNQITD--LSPLAGLTNLQYLSIGNNQVN--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|430744490|ref|YP_007203619.1| hypothetical protein Sinac_3679 [Singulisphaera acidiphila DSM
18658]
gi|430016210|gb|AGA27924.1| hypothetical protein Sinac_3679 [Singulisphaera acidiphila DSM
18658]
Length = 242
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 168 LKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L+ D++N +KG + TD L L+ ++NL ++ + +E T+V+D +F L
Sbjct: 84 LQLADLTN--LKGVLLTGSQATDQGLKCLSQMENLENI--VTVEATEVTDVGVFYLEKLS 139
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+L L + ++LTD ++ ++ KL + +R LT++GL K L++LDL
Sbjct: 140 KLRDLHISYSNLTDAAIASIAKHPKLEQILVRGNRLTDAGLTHLKDLECLQVLDL 194
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLK-FIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
L NL+ + L+G+Q D + +S M +L+ + + T++ TD+ + L+
Sbjct: 89 LTNLKGVLLTGSQATDQGLKCLSQMENLENIVTVEATEV----------TDV--GVFYLE 136
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
L+ L L++ + ++DA + ++ +L + +R LTD L L L L L + D
Sbjct: 137 KLSKLRDLHISYSNLTDAAIASIAKHPKLEQILVRGNRLTDAGLTHLKDLECLQVLDLAD 196
Query: 260 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 304
LT+ GL + L+++ + G +TE + + P + V
Sbjct: 197 TGLTDVGLEELRLLAKLRIVCV-GDTKVTEAGVQRLKAAMPHLRV 240
>gi|356561629|ref|XP_003549083.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Glycine max]
Length = 1596
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
LSF D+ ++ FL M +L HLDLS + I + + +NL L+LS+ ++
Sbjct: 169 LSFNDLLGEGMAISSFLCAMSSLTHLDLSDTGIHGKIPPQIGNL-SNLVYLDLSSV-VAN 226
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAI---SYMSMMPSLKFIDISNTDIKGFI-QQVGA 187
V G+L L L LSG + + S++ M SL +D+S G I Q+G
Sbjct: 227 GTVPSQIGNLSKLRYLDLSGNEFLGEGMSIPSFLCAMTSLTHLDLSGNGFMGKIPSQIGN 286
Query: 188 ETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
++LV L L + L N+E ++++ L E +HLS N S LH L
Sbjct: 287 LSNLVYLGLGGHSVVEPLFAENVEWV----SSMWKL----EYLHLSNANLSKAFHWLHTL 338
Query: 247 SSLSKLTNLSIRDAVL 262
SL LT L + + L
Sbjct: 339 QSLPSLTRLYLSNCTL 354
>gi|85679234|gb|ABC72033.1| InlA [Listeria monocytogenes]
Length = 794
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 202 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 254
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 255 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 312
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L L L L + Q+ D + P+S K L +L+L +++D+S +S+L+KL L
Sbjct: 313 AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSNLTKLQRL 365
>gi|83629781|gb|ABC26552.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D +S ++ + +L+++ I N +
Sbjct: 157 APLAG-LSNLQVLYLDLNQITD--LSPLAGLTNLQYLSIGNNQVN--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|168701211|ref|ZP_02733488.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 702
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 44/184 (23%)
Query: 93 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 152
L HLDLS S +GDD ++++A P L+ L L T
Sbjct: 195 GLTHLDLSFSRVGDDDLKLLAA--------------------------FPKLKSLRLERT 228
Query: 153 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 212
Q+ D + +++ + L+ +D+S + TD L L L +L L L T
Sbjct: 229 QVTDAGMKHLAAVEGLEALDLSRLRV----------TD--AGLKELAGLKNLRALTLLFT 276
Query: 213 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR-----DAVLTNSGL 267
QV+ A L P + L HL+L + + + + + L L++ DAV +GL
Sbjct: 277 QVTGAGLRPFAGAG-LTHLALSGSKVKAADVADVVACRALAALAVEGRWPADAVAQLAGL 335
Query: 268 GSFK 271
+
Sbjct: 336 PELR 339
>gi|153940509|ref|YP_001391037.1| hypothetical protein CLI_1777 [Clostridium botulinum F str.
Langeland]
gi|384462076|ref|YP_005674671.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
gi|152936405|gb|ABS41903.1| leucine rich repeat protein [Clostridium botulinum F str.
Langeland]
gi|295319093|gb|ADF99470.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
Length = 1359
Score = 45.4 bits (106), Expect = 0.041, Method: Composition-based stats.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 54/312 (17%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT----TF 57
F + L ++ T ++ +PN++SL L+LSNC + S + N + L ++L+
Sbjct: 442 FEHIEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNL 501
Query: 58 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV----EMVA 113
+NE + L +L ++N+++ + L + L LD++ D V V
Sbjct: 502 LNEINNISIL--GKLEYLSIANTNVVKIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVE 559
Query: 114 CVGANL---------RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
+G + R + +S I L ++ L LSG I D + +
Sbjct: 560 IIGNEIVTFGDKVLEREIRELINNYSEP---IYKRQLLSITKLELSGRGIVD--LQGLES 614
Query: 165 MPSLKFIDISNTDIKGF--IQQVGAETDLVL------SLTALQNLNHLERLNLEQTQVSD 216
M +L ++D+SN +I I+++ LVL S+ +++L LE L+L + D
Sbjct: 615 MENLIYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGD 674
Query: 217 ATLFPLSTFKELIHLSL-RNASLTDVSLHQL-----------------SSLSKLTNLSIR 258
T L +L L L RN ++ SL L SL KL NL R
Sbjct: 675 IT--ALGGLSQLTRLDLSRNGIVSINSLGGLINLQYLSLYENKISEREESLKKLYNL--R 730
Query: 259 DAVLTNSGLGSF 270
+ L NSG+ +F
Sbjct: 731 ELYLKNSGISNF 742
Score = 42.0 bits (97), Expect = 0.54, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 33/178 (18%)
Query: 93 ALEHLDLSSSMIGDDSVEMVAC-VGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEI 146
A+ L++SS + + + + +NL ++NL G G L G L L
Sbjct: 807 AISKLNISSKLTNTNIINLDGIQYFSNLHSINLR-------GHGKLEGLENLMPLRGLIK 859
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L L G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L
Sbjct: 860 LDLQGREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRV 906
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L+L +T +S+ ++ LS + L L L +TD LS L LTNL D V N
Sbjct: 907 LDLSRTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNLIKLDLVGNN 957
Score = 39.7 bits (91), Expect = 2.6, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 25/149 (16%)
Query: 123 NLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
N+ F +A + L G ++ LE L+LSGT I D IS + + +L+ ++ISNT I
Sbjct: 356 NIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKD--ISLLKYLTNLREVNISNTSIS- 412
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
+TAL++ ++ LNL +T+++ L K+ H+ S T
Sbjct: 413 -------------DITALESSIYIRYLNLNKTEITT-----LEVIKKFEHIEKLYVSGTK 454
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGS 269
+S + +L+ L L + + LT++ S
Sbjct: 455 IS--TIPNLNSLMELDLSNCNLTSNNFLS 481
>gi|421871176|ref|ZP_16302798.1| leucine Rich Repeat family protein [Brevibacillus laterosporus
GI-9]
gi|372459803|emb|CCF12347.1| leucine Rich Repeat family protein [Brevibacillus laterosporus
GI-9]
Length = 280
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 31/173 (17%)
Query: 85 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 144
+ FL+ +K LE L ++ V + + L NL L S + HL L
Sbjct: 108 YLFLSDLKELESLSITGF-----KVNQLPVLSPKLNNLTLEEGDLSDLSI---IKHLELL 159
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
+ L++ +I D IS + + +L F+D+SN + ++ ++ +HL
Sbjct: 160 QYLTVRHNKIKD--ISPIQSLRNLIFLDVSNNPLH--------------TIDPVKEFSHL 203
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
ERL L T V+D T+ LS+ +L L +R D ++ + SLS LT L+I
Sbjct: 204 ERLQLMNTTVTDITI--LSSLSKLRFLDIR-----DTNVESVKSLSGLTELTI 249
>gi|434404320|ref|YP_007147205.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428258575|gb|AFZ24525.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 864
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 20/194 (10%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L L++ + + F LT + L L+L S + D S +++ +++ L LS T
Sbjct: 660 LEKLNLKKTDIQNFSKLTTLSKLISLNLHSCEVEDLSW-LISL--HDIQELILSRTGIQ- 715
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAET 189
+ +LA L L++L LS T+++ +I+ ++ L+ +DIS T ++ + A
Sbjct: 716 -DINLLAA-LAYLKVLDLSETEVE--SINALADSAHLEVLDISETKVQSIEALTNARALR 771
Query: 190 DLVLSLTALQNLN------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
L L+LT+++NL+ LE L++ +T VSD ++ L+ FK L L +RN S+ D S
Sbjct: 772 SLNLNLTSVENLSPLKNSLQLEELSIWRTPVSDLSV--LNNFKHLKKLDIRNTSVEDFS- 828
Query: 244 HQLSSLSKLTNLSI 257
L +L +L L I
Sbjct: 829 -SLLNLPRLWQLRI 841
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 136/269 (50%), Gaps = 41/269 (15%)
Query: 2 FPRLSFLNLAWTGVTKLPNIS---SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 58
P L L+L T VT ++ SLE L++S+ I+ I PL+ I+ I
Sbjct: 459 IPSLQHLSLDSTKVTNFQPLALLPSLEYLSISDNQIEDI-------TPLSSIT-GLKDLI 510
Query: 59 NER---EAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--EMV 112
ER E + ++ L L V +SS+S FL + L+ L+LS + + D S ++V
Sbjct: 511 AERINLEDWSPLQQMQNLEKLSVQDSSVSDISFLAPISKLQILNLSGTRVVDVSPLQQLV 570
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
LR L+L NT + + +L G L +L+ L L + + D+ S +S +P+++ +
Sbjct: 571 -----ELRELSLFNTEVN--DIRVLVG-LNHLKTLYLDSSAVRDF--SPLSHLPTIESLS 620
Query: 173 ISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
+S++ I ++++ + V ++AL+ L +LE+LNL++T + + + L+T
Sbjct: 621 LSSSSIIDLSWLPNLTNLKELCLDYTEVADISALETLPNLEKLNLKKTDIQNFS--KLTT 678
Query: 225 FKELIHLSLRNASLTD----VSLHQLSSL 249
+LI L+L + + D +SLH + L
Sbjct: 679 LSKLISLNLHSCEVEDLSWLISLHDIQEL 707
>gi|7508140|pir||T28714 hypothetical protein T21D12.9a - Caenorhabditis elegans
Length = 789
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 84 RFCFLTQMKALEHLDLSSSMIG--DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 141
RF Q+ +L+++ L+ + + DD + AC G L++LNLS R + G + G L
Sbjct: 143 RFLAFNQLPSLQNVSLARNDVYRLDDGM-FYACEG--LKHLNLSTNRVQAVTEGWMFG-L 198
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLSLTA 197
+LE+L LS QI + IS S P LK++ + + I+ G + + +L+LS +
Sbjct: 199 TSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANS 258
Query: 198 LQNLNHL 204
+ +L+
Sbjct: 259 IDSLHKF 265
>gi|87308227|ref|ZP_01090369.1| hypothetical protein DSM3645_21557 [Blastopirellula marina DSM
3645]
gi|87289309|gb|EAQ81201.1| hypothetical protein DSM3645_21557 [Blastopirellula marina DSM
3645]
Length = 376
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 74 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 133
+D N S +L +++ LE+L + S+ D +A V +L NL L + + S+
Sbjct: 138 LIDGRNLSNIGLWYLEELRFLENLTIQSASFDGDCFHYLANV-RSLTNLTLQSDKLKSSD 196
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
+ L G LP LE+L LS +D + + + L+ +++ N + AE
Sbjct: 197 LAGL-GELPQLELLFLSVQSVDGAGFAEIGKLTHLRSLNLRNV-------RTTAE----- 243
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS---------------- 237
+ L L L+ L + + + L P+ ++L L L N++
Sbjct: 244 QMKPLAQLQELQFLTMNDSSIKGG-LGPIGDLRDLHRLELANSTIRDEDLDSLQQLPLLA 302
Query: 238 --------LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+TD L +L + +L L++R+ +T GL + +
Sbjct: 303 NLNLAHTKITDAGLVKLGQMKRLNTLNVRNTTVTKEGLQALQ 344
>gi|125534797|gb|EAY81345.1| hypothetical protein OsI_36518 [Oryza sativa Indica Group]
Length = 740
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+ +++ LE LDLS++++ E C G L+ ++LSN S + L G+ ++
Sbjct: 600 FVCELRYLEDLDLSNNLL---EGEFPQCSGRKLKYIDLSNNSLSGRFLPSLRGN-KQIQF 655
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
L LS + + S++ + L+F+ +SN G I T++ NL +L +
Sbjct: 656 LDLSSNKFNGTLPSWIGDLQELQFLALSNNTFSGHIP------------TSIGNLGNLYQ 703
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
L L + S + + L L L + +++ V
Sbjct: 704 LKLSKNMFSGHIPTSIGNLRNLYQLKLESNNISGV 738
>gi|194753748|ref|XP_001959172.1| GF12192 [Drosophila ananassae]
gi|190620470|gb|EDV35994.1| GF12192 [Drosophila ananassae]
Length = 803
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 20/239 (8%)
Query: 60 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 117
+ AFL I L + N+ +S + L+ + +LE LDL+++ I ++ VG
Sbjct: 181 HKSAFLGIHGPLQALGLPGNALMSVPWNALSTLGSLERLDLANNKI--KALGTADFVGLG 238
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 175
NL L LSN + SS +L LE+L L G ++ DY S S+ SL+ +D++
Sbjct: 239 NLVYLELSNNQISSISQRTFV-NLRKLEVLKLGGNRLGDYPQSLRSLSQCFSLRQLDLTA 297
Query: 176 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
++ LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 298 NNLNA-----------PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRH 346
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 292
+ + H L L L + + S + L +LDL +L LT D I
Sbjct: 347 NQIDVLQDHAFYGLGTLDTLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 405
>gi|221061997|ref|XP_002262568.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193811718|emb|CAQ42446.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 686
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 44/216 (20%)
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD----DSVEMVAC 114
N + LYI+ S LS ++SN F + ++ L+LS + IG +E++
Sbjct: 212 NNEKIKLYIKNSQLSDSNLSN-------FFEKCTHIQSLNLSENGIGSSLFSKHMEILFK 264
Query: 115 VGANLRNLNLSNTRFSSAGVGI------LAGHL-------PNLEILSLSGTQIDDYAISY 161
NL+ L+LSN F G L H+ PNL ILS + +++D+ S+
Sbjct: 265 SQLNLKELHLSNICFDKNGTNKQVDGNELLKHMVNQLNEAPNLSILSFANNRVNDHGFSF 324
Query: 162 MSMM-----PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 216
++ ID SN I + LS AL+N L+ +NL +++D
Sbjct: 325 FCEFLKKNKNNITAIDFSNNQISNMNE---------LS-EALKNNETLKMINLSNNRITD 374
Query: 217 ATLF-----PLSTFKELIHLSLRNASLTDVSLHQLS 247
+L LS+ + LSL N LTD S L+
Sbjct: 375 GSLKHFCYDTLSSNISITELSLSNNDLTDFSCAYLA 410
>gi|17542470|ref|NP_499897.1| Protein SMA-10, isoform c [Caenorhabditis elegans]
gi|351064241|emb|CCD72527.1| Protein SMA-10, isoform c [Caenorhabditis elegans]
Length = 737
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 84 RFCFLTQMKALEHLDLSSSMIG--DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 141
RF Q+ +L+++ L+ + + DD + AC G L++LNLS R + G + G L
Sbjct: 235 RFLAFNQLPSLQNVSLARNDVYRLDDGM-FYACEG--LKHLNLSTNRVQAVTEGWMFG-L 290
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLSLTA 197
+LE+L LS QI + IS S P LK++ + + I+ G + + +L+LS +
Sbjct: 291 TSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANS 350
Query: 198 LQNLNHL 204
+ +L+
Sbjct: 351 IDSLHKF 357
>gi|255587333|ref|XP_002534233.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223525672|gb|EEF28156.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 477
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 141 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 200
L NLE L LS D+ +S++ + SLK +DIS +KG L L+
Sbjct: 137 LNNLEYLDLSFNHFDNGVLSFLKGLSSLKTLDISYNQLKG-----------PFDLKELKA 185
Query: 201 LNHLERLNL---EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ LE+L+L E + + +T FP+ F+ L HL L ++ L + L + +L+ L LS+
Sbjct: 186 WSKLEKLSLGGNEIDEFTSSTGFPI--FRNLQHLYLNSSILNNSFLQSIGTLTSLKALSL 243
Query: 258 RDAVLTNS 265
LT++
Sbjct: 244 PKCGLTST 251
>gi|195378110|ref|XP_002047830.1| GJ11710 [Drosophila virilis]
gi|194154988|gb|EDW70172.1| GJ11710 [Drosophila virilis]
Length = 536
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 23/254 (9%)
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEM-VACV 115
NE+E + L +L +SN+++ F C L + L+ L L S+ + + ++M +
Sbjct: 181 NEQENITLGSNANLRYLSISNNNVRDFLWCRLRGLPKLQELHLHSNWL--EVLDMGIFYA 238
Query: 116 GANLRNLNLSNTRFSSAGVGILAGHLPN----LEILSLSGTQI---DDYAISYMSMMPSL 168
LR LN+SN + G P+ L +L S + +DY S + + +L
Sbjct: 239 LPELRVLNVSNNNIYEIQRNLFVGPAPDVYPLLRVLDYSSNNVKALEDYVFSRLHHLETL 298
Query: 169 -----KFIDISNTDIKGF--IQQVGAETDLVLSL--TALQNLNHLERLNLEQTQVSD--A 217
+ +S T +G +Q + + + ++ L NL L+ L+L + + A
Sbjct: 299 NLWFNQISKVSPTAFRGLTELQSLQLQGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGA 358
Query: 218 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 277
+F S + L L L N ++ + SSL L L +R LT+ + F P R L+
Sbjct: 359 NVFGGSVLRNLSFLDLSNNNIDQLHPLAFSSLPFLQELRLRRNKLTSLDIRMFAPLRRLR 418
Query: 278 LLDLHGGWLLTEDA 291
+L L L+ +A
Sbjct: 419 VLTLSENRLMDIEA 432
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 30/291 (10%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLL 72
G N +SL+ LNL++C ++ + + + A L + ++ + A + + L
Sbjct: 91 GRYGFRNFASLQRLNLTHCQLEELRSKHFADNASLLNLDVSHNDLLIIERALMR-QLPNL 149
Query: 73 SFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+ + SN+ ++ F +K LE LDL++ ++ + ANLR L++SN
Sbjct: 150 VYANFSNNLIANVEFDAFKDLKYLEFLDLNT----NEQENITLGSNANLRYLSISNNNVR 205
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ---VGA 187
L G LP L+ L L ++ + +P L+ +++SN +I IQ+ VG
Sbjct: 206 DFLWCRLRG-LPKLQELHLHSNWLEVLDMGIFYALPELRVLNVSNNNIYE-IQRNLFVGP 263
Query: 188 ETDLVLSLTALQ---------------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
D+ L L L+HLE LNL Q+S + EL L
Sbjct: 264 APDVYPLLRVLDYSSNNVKALEDYVFSRLHHLETLNLWFNQISKVSPTAFRGLTELQSLQ 323
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP--RSLKLLDL 281
L+ + + +L+ L L + + G F R+L LDL
Sbjct: 324 LQGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGANVFGGSVLRNLSFLDL 374
>gi|404412362|ref|YP_006697949.1| internalin E [Listeria monocytogenes SLCC7179]
gi|404238061|emb|CBY59462.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 499
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 84 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 134
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 135 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 189
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 190 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 233
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 234 YLEENQISDV-----SPLAKLPNLSI--VTLTN 259
>gi|290991518|ref|XP_002678382.1| predicted protein [Naegleria gruberi]
gi|284091994|gb|EFC45638.1| predicted protein [Naegleria gruberi]
Length = 344
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ +MK L L++ + IGD+ ++ ++ + ++L +L + G L HL L L
Sbjct: 46 IGKMKQLTKLEMCGNKIGDEGIKALSNLNSSLTHLCVRKNNIGQEGAKTLK-HLTRLNYL 104
Query: 148 SLSGTQIDDYAISYMSMMPSLK--FIDISNTDIKGF--IQQVGAETDLVLS--------L 195
+ ++ + +S +P L FI +N +G I ++ T LV+S
Sbjct: 105 DIRKNKLGNQGAKEISELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMSENPIGDGGA 164
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
++ L HL+ L ++ T V + + K+L L +++ L + + L++LT L
Sbjct: 165 ISVSQLRHLKTLCIQWTNVRTEGIKAICNMKQLTCLHIQSNKLGFDDIKPIGQLNQLTRL 224
Query: 256 SIRDAVLTNSG 266
I D + +SG
Sbjct: 225 LISDNQIGDSG 235
>gi|7508141|pir||T28715 hypothetical protein T21D12.9b - Caenorhabditis elegans
Length = 1355
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 84 RFCFLTQMKALEHLDLSSSMIG--DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 141
RF Q+ +L+++ L+ + + DD + AC G L++LNLS R + G + G L
Sbjct: 143 RFLAFNQLPSLQNVSLARNDVYRLDDGM-FYACEG--LKHLNLSTNRVQAVTEGWMFG-L 198
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLSLTA 197
+LE+L LS QI + IS S P LK++ + + I+ G + + +L+LS +
Sbjct: 199 TSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANS 258
Query: 198 LQNLNHL 204
+ +L+
Sbjct: 259 IDSLHKF 265
>gi|290892585|ref|ZP_06555578.1| leucine rich repeat domain-containing protein [Listeria
monocytogenes FSL J2-071]
gi|404406725|ref|YP_006689440.1| hypothetical protein LMOSLCC2376_0242 [Listeria monocytogenes
SLCC2376]
gi|290557894|gb|EFD91415.1| leucine rich repeat domain-containing protein [Listeria
monocytogenes FSL J2-071]
gi|404240874|emb|CBY62274.1| leucine rich repeat domain protein [Listeria monocytogenes
SLCC2376]
Length = 361
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F+D+S + +S L + LE + L+ + I D + M + L NL L + S+
Sbjct: 104 LKFVDLSQNKISNLESLANLTELETVSLNYNQITDITPLMNS---PKLYNLELGVNQIST 160
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 183
+L NL+IL+LS Q+ D IS + P L + IS +I +Q
Sbjct: 161 LPS---FENLTNLKILNLSSNQLKD--ISALKDTPQLTNLSISANNISDISVLSECDNLQ 215
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
AE++ + S+ AL+N LE + Q+ D T PLST + + + ++D S
Sbjct: 216 AFYAESNQLTSIEALRNKTKLEYFDANFNQIKDVT--PLSTIPTIRSIKMEENQISDFS 272
>gi|255024787|ref|ZP_05296773.1| internalin A [Listeria monocytogenes FSL J1-208]
Length = 200
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 27 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 79
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 80 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 137
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 138 AGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 187
>gi|149178243|ref|ZP_01856836.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148842892|gb|EDL57262.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 254
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
L LQ+L L L+LE+T+V+DA L L L +L+L +TD L QLSSL KL
Sbjct: 95 LAQLQHLKALTHLHLEKTKVNDAGLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKR 154
Query: 255 LSI 257
L +
Sbjct: 155 LYV 157
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 199 QNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
QN + LE +L +++D TL L+ ++ L+LR +T L QL L LT+L +
Sbjct: 50 QNDDRLEIAFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHL 109
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC--KMHPRIEVWH 306
+ ++GL + +L+ L+L+G +T+ + Q K R+ VW
Sbjct: 110 EKTKVNDAGLKHLQQLPNLEYLNLYGTE-ITDAGLSQLSSLKKLKRLYVWQ 159
>gi|217965637|ref|YP_002351315.1| hypothetical protein LMHCC_2364 [Listeria monocytogenes HCC23]
gi|386007004|ref|YP_005925282.1| leucine rich repeat domain protein [Listeria monocytogenes L99]
gi|386025587|ref|YP_005946363.1| leucine rich repeat domain protein [Listeria monocytogenes M7]
gi|217334907|gb|ACK40701.1| leucine rich repeat domain protein [Listeria monocytogenes HCC23]
gi|307569814|emb|CAR82993.1| leucine rich repeat domain protein [Listeria monocytogenes L99]
gi|336022168|gb|AEH91305.1| leucine rich repeat domain protein [Listeria monocytogenes M7]
Length = 361
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F+D+S + +S L + LE + L+ + I D + M + L NL L + S+
Sbjct: 104 LKFVDLSQNKISNLESLANLTELETVSLNYNQITDITPLMNS---PKLYNLELGVNQIST 160
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 183
+L NL+IL+LS Q+ D IS + P L + IS +I +Q
Sbjct: 161 LPS---FENLTNLKILNLSSNQLQD--ISALKDTPQLTNLSISANNISDISVLSECDNLQ 215
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
AE++ + S+ AL+N LE + Q+ D T PLST + + + ++D S
Sbjct: 216 AFYAESNQLTSIEALRNKTKLEYFDANFNQIKDVT--PLSTIPTIRSIKMEENQISDFS 272
>gi|83629907|gb|ABC26615.1| internalin E [Listeria monocytogenes]
gi|83629941|gb|ABC26632.1| internalin E [Listeria monocytogenes]
gi|83629951|gb|ABC26637.1| internalin E [Listeria monocytogenes]
gi|83629955|gb|ABC26639.1| internalin E [Listeria monocytogenes]
gi|83629957|gb|ABC26640.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 83 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 133
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 134 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 188
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 189 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 232
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 233 YLEENQISDV-----SPLAKLPNLSI--VTLTN 258
>gi|290993148|ref|XP_002679195.1| predicted protein [Naegleria gruberi]
gi|284092811|gb|EFC46451.1| predicted protein [Naegleria gruberi]
Length = 311
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
F+++MK L LD+S + IG+ + ++ + L +LN+ N R G ++ + L +
Sbjct: 125 FISEMKQLTSLDVSDNEIGNVGAKHISEM-KQLTSLNICNNRIGDEGAKFIS-EMQQLTL 182
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL----- 201
L +S I D + ++S M L +IS+ I VGA+ S++ +Q L
Sbjct: 183 LDISDNHIGDKGVKFISEMKQLTSFNISDD----LIGNVGAK-----SISEMQQLTSLDV 233
Query: 202 --NH--------------LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
NH L LN+ +V D +S K+L L++ + L D +
Sbjct: 234 SDNHIGDSGVKFISEMKQLTSLNIAINRVGDEGAKLISEMKQLRSLNISDNELGDEGVKF 293
Query: 246 LSSLSKL 252
+S + +L
Sbjct: 294 ISEMKQL 300
>gi|85679268|gb|ABC72050.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLASTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL+ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLAGLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|344270426|ref|XP_003407045.1| PREDICTED: F-box/LRR-repeat protein 13 [Loxodonta africana]
Length = 680
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 117 ANLRNLNL-SNTRFSSAGVGILAGHLPNLE-ILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
NLR + N R + + + H PN+ I + + D ++ +S++ L ++++
Sbjct: 345 CNLRKIRFEGNKRITDSCFKFIDKHYPNIRHIYMVDCKGLTDGSLKSLSVLKQLTVLNLA 404
Query: 175 NT----DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELI 229
N D+ G Q + + L N HL DA++ LS L
Sbjct: 405 NCVGIGDV-GLKQLLDGPVSTKIRELNLNNCIHL----------GDASIVRLSERCPNLN 453
Query: 230 HLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 288
+L+LRN LTD+ + + ++ L ++ + V++N GL + + LK L L + +T
Sbjct: 454 YLNLRNCEHLTDLGIEHIVNIFSLVSVDLSGTVISNEGLMTLSRHKKLKELSLSECYKIT 513
Query: 289 EDAILQFCK 297
+ I FCK
Sbjct: 514 DMGIQAFCK 522
>gi|384252696|gb|EIE26172.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 663
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 41/262 (15%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L+ + L HLD C ++ R+ +++N AGV L+ L NL L
Sbjct: 345 LSSLTGLTHLDF--------------CSPSHRRDEDITN-----AGVAALSA-LTNLRSL 384
Query: 148 SLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 206
+L+G +++ +++++ +L +D+S G D + SLT L++L
Sbjct: 385 NLAGHSEVTAEGLAFLADATALTCLDLS-----GLPLGPTGGVDFLASLTNLRSLC---- 435
Query: 207 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
L++TQ+S+ + L + L L L ++ D + L+ L+KL +L +R +TN+G
Sbjct: 436 --LQRTQLSNEHVQQLGSLTALTSLGLAWCAIDDEAAAALAPLTKLADLDVRYCPMTNAG 493
Query: 267 LGSFKPPRSLKLLDLHG--GWLLTEDAILQFCKMHPRIEVW-----HELSVICPSDQIGS 319
L R++ L + G T I + H ++++W V+ +D +
Sbjct: 494 LCQLS--RAMPDLAIFAVEGCPATSIGIWRLLSRHRKLKLWLPEQDRMNRVMNVADALLL 551
Query: 320 NGPSPSRTSLRASLVKQKQDPM 341
+P + LR ++ + PM
Sbjct: 552 ASVAPGQRRLRVAVFPEPSWPM 573
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSL 249
L+ LT L L L +L L + V++ L +L L + +A +TD LH LSSL
Sbjct: 289 LLPGLTNLSALTDLRQLRLVKVGVTNGVLRCAGALTKLQSLHIPDAFRVTDTGLHHLSSL 348
Query: 250 SKLTNLSI------RDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ LT+L RD +TN+G+ + +L+ L+L G
Sbjct: 349 TGLTHLDFCSPSHRRDEDITNAGVAALSALTNLRSLNLAG 388
>gi|167768392|ref|ZP_02440445.1| hypothetical protein CLOSS21_02949 [Clostridium sp. SS2/1]
gi|167709916|gb|EDS20495.1| leucine Rich Repeat protein [Clostridium sp. SS2/1]
Length = 967
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
G+ + E +A + +L+LSN S+ + +L G ++ L LSG +I + +
Sbjct: 396 GEITQEELAAFNGDEGSLDLSNKNLSN--IDLLKGLSDKIKELDLSGNKITEIPEGFFDN 453
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
M +L+++D+++ IK L A +N L +N+ +++ LS
Sbjct: 454 MTNLEYVDLNSNHIK------------ALPENAFKNTKKLNWINIRANNLTEIKKDTLSG 501
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+L++L L N S+T V L + L LSI
Sbjct: 502 LDKLVYLELDNNSITSVEAGALDGDTSLKQLSI 534
>gi|317420071|emb|CBN82107.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 889
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 30/265 (11%)
Query: 3 PRLSFLNLAWTGV---TKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFI 58
P+L L++ T V + L +S+L+ LNL + +S LE + L+ +SLAG
Sbjct: 621 PQLRLLSIKQTKVKDVSALARLSNLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVA 680
Query: 59 NEREAFLYIETSLLSFLD------VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
+ +A I L+ L V++S LS L+ + L+ D + + D V +
Sbjct: 681 DGNQALQIISDLRLTQLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYT--QVTDQGVSQL 738
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS-YMSMMPSLKFI 171
+ + L+ L+LSNT+ + AG+ L G L L+ L L T + ++ ++ +P L+ +
Sbjct: 739 STM-TRLKKLSLSNTQVTDAGLPSLRG-LQELQELCLDRTAVTSRGVADLITCLPHLQVL 796
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+++T QVG D V+ ++ N L +LNL +T+++D L L + +HL
Sbjct: 797 GLAST-------QVG---DTVVRRGVIR-CNQLVKLNLSRTRITDHGLKCL----KHMHL 841
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLS 256
+ N T VSL +++L TN+S
Sbjct: 842 AQVNLDGTGVSLIGIANLLSFTNIS 866
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 41/273 (15%)
Query: 13 TGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 70
+G++ +++ L+ LNL++C+ DS L+ L +SL T + + LY++++
Sbjct: 536 SGLSIFSSLAKLQYLNLASCSKLTDSCLQHITGLKSLCFLSL-DQTKVTDAGMVLYLQSA 594
Query: 71 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
L L L+ + + + S+ ++ LR L++ T+
Sbjct: 595 --------------------PSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKVK 634
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
V LA L NL+ L+L T + + ++ ++S P+L + ++ + Q + +D
Sbjct: 635 D--VSALA-RLSNLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVADGNQALQIISD 691
Query: 191 LVLSLTALQNLNHL---------------ERLNLEQTQVSDATLFPLSTFKELIHLSLRN 235
L L+ L + + E + TQV+D + LST L LSL N
Sbjct: 692 LRLTQLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSN 751
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 268
+TD L L L +L L + +T+ G+
Sbjct: 752 TQVTDAGLPSLRGLQELQELCLDRTAVTSRGVA 784
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 110/249 (44%), Gaps = 72/249 (28%)
Query: 77 VSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+++S LS F L + L++L+L+S S + D ++ + + +L L+L T+ + AG+
Sbjct: 533 ITDSGLSIFSSLAK---LQYLNLASCSKLTDSCLQHITGL-KSLCFLSLDQTKVTDAGMV 588
Query: 136 ILAGHLPN-LEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQVGAETDLVL 193
+ P+ L LSL+ T + + ++ + + +P L+ + I T +K
Sbjct: 589 LYLQSAPSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKVK-------------- 634
Query: 194 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN------------------ 235
++AL L++L+ LNL+ T V++++L LS+ L LSL
Sbjct: 635 DVSALARLSNLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVADGNQALQIISDLRL 694
Query: 236 ---------------------------------ASLTDVSLHQLSSLSKLTNLSIRDAVL 262
+TD + QLS++++L LS+ + +
Sbjct: 695 TQLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSNTQV 754
Query: 263 TNSGLGSFK 271
T++GL S +
Sbjct: 755 TDAGLPSLR 763
>gi|386052545|ref|YP_005970103.1| internalin E [Listeria monocytogenes Finland 1998]
gi|346645196|gb|AEO37821.1| internalin E [Listeria monocytogenes Finland 1998]
gi|441469815|emb|CCQ19570.1| Internalin-A [Listeria monocytogenes]
gi|441472952|emb|CCQ22706.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 499
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 84 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 134
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 135 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 189
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 190 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 233
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 234 YLEENQISDV-----SPLAKLPNLSI--VTLTN 259
>gi|157676731|emb|CAP08000.1| si:dkeyp-24a7.7 [Danio rerio]
Length = 538
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
++ L LDLS++M+ +E+ A VG NL L LS R VG +G LPN++ L +
Sbjct: 80 LRQLRELDLSANML--TVIEVEAFVGLQNLITLRLSRNRLKIIPVGAFSG-LPNVQFLDI 136
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 209
S +I MPSL+ ++ S D+ + +S A L +L L L
Sbjct: 137 SENEILVLLDDMFGEMPSLQKLEASENDL------------VFISNRAFSGLPNLLELRL 184
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
E+ ++ S L HL LT + + L +L +L +
Sbjct: 185 ERCNLTTVPSEAFSRLTGLQHLRFCRLGLTALPNNSFRQLQRLQDLHV 232
>gi|16802310|ref|NP_463795.1| internalin E [Listeria monocytogenes EGD-e]
gi|3980136|emb|CAA07458.1| internalin E [Listeria monocytogenes]
gi|16409629|emb|CAD00791.1| internalin E [Listeria monocytogenes EGD-e]
Length = 499
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 84 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 134
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 135 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 189
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 190 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 233
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 234 YLEENQISDV-----SPLAKLPNLSI--VTLTN 259
>gi|83629763|gb|ABC26543.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 48/190 (25%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++S + L +T +++++ LDL+S+ I D V
Sbjct: 124 LELSGNPLKNVSAITGLQSIKTLDLTSTQITD---------------------------V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI D +S ++ + +L+++ I N +
Sbjct: 157 APLAG-LSNLQVLYLDLNQITD--LSPLAGLTNLQYLSIGNNQVN--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|83629749|gb|ABC26536.1| internalin C2 [Listeria monocytogenes]
gi|83629755|gb|ABC26539.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I N +
Sbjct: 157 APLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVN--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|290972196|ref|XP_002668843.1| predicted protein [Naegleria gruberi]
gi|284082373|gb|EFC36099.1| predicted protein [Naegleria gruberi]
Length = 348
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 130/292 (44%), Gaps = 31/292 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
++++ L+ L++S + IG++ + ++ C NL NLN+ N GV ++ L NL L
Sbjct: 13 ISKLVNLKTLNISINNIGNEGL-IIVCNLINLTNLNIENNDIGDEGVQDIS-KLVNLTNL 70
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI---------KGFIQQVGAETDLVLSLTAL 198
++ + +S + +L ++++ ++ Q+ E D + S+ L
Sbjct: 71 NIKSNALRSKGAQEISKLTNLTSLNVAENNVMLSEKNLSRNNITHQI--ENDGIKSIFNL 128
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
NL +L N++ + D + +S L +L + N + D + + +L LTNL+I+
Sbjct: 129 INLTNL---NIQNNDIGDEGVQDISKLINLTNLDIGNNKIRDEGIKSIFNLINLTNLNIQ 185
Query: 259 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH--PRIEVWHELSVICPSDQ 316
+ + + G+ +L LD+ + ++ + CK+ ++ W+ + I ++Q
Sbjct: 186 NNDIGDEGVQDISKLINLTNLDICQTK-IGDNGAKEICKLINLTKLVCWN--TDIATNNQ 242
Query: 317 IGSNGPSPSRTSLRASL---------VKQKQDPMPMSHSFLDQRLKYSREEL 359
I + L++ L +KQ + ++ + LK EEL
Sbjct: 243 INI-LKNEKNQKLKSGLKEKYNKLLEIKQANEKAIQNYKNQNDNLKNENEEL 293
>gi|83629757|gb|ABC26540.1| internalin C2 [Listeria monocytogenes]
gi|83629779|gb|ABC26551.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I N +
Sbjct: 157 APLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVN--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|255026402|ref|ZP_05298388.1| internalin E [Listeria monocytogenes FSL J2-003]
Length = 480
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 65 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 115
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 116 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 170
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 171 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 214
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 215 YLEENQISDV-----SPLAKLPNLSI--VTLTN 240
>gi|47096358|ref|ZP_00233953.1| leucine rich repeat domain protein [Listeria monocytogenes str.
1/2a F6854]
gi|254913507|ref|ZP_05263519.1| leucine rich repeat domain-containing protein [Listeria
monocytogenes J2818]
gi|254937912|ref|ZP_05269609.1| leucine rich repeat domain-containing protein [Listeria
monocytogenes F6900]
gi|386045914|ref|YP_005964246.1| internalin [Listeria monocytogenes J0161]
gi|47015232|gb|EAL06170.1| leucine rich repeat domain protein [Listeria monocytogenes str.
1/2a F6854]
gi|258610521|gb|EEW23129.1| leucine rich repeat domain-containing protein [Listeria
monocytogenes F6900]
gi|293591515|gb|EFF99849.1| leucine rich repeat domain-containing protein [Listeria
monocytogenes J2818]
gi|345532905|gb|AEO02346.1| internalin [Listeria monocytogenes J0161]
Length = 361
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F+D+S + +S L + LE + L+ + I D + M + L NL L + S+
Sbjct: 104 LKFVDLSQNKISNLESLANLTELETVSLNYNQITDITPLMNS---PKLYNLELGVNQIST 160
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 183
+L NL+IL+LS Q+ D IS + P L + IS +I +Q
Sbjct: 161 LPS---FENLTNLKILNLSSNQLKD--ISALKDTPQLTNLSISANNISDISVLSECDNLQ 215
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
AE++ + S+ AL+N LE + Q+ D T PLST + + + ++D S
Sbjct: 216 AFYAESNQLTSIEALRNKTKLEYFDANFNQIKDVT--PLSTIPTIRSIKMEENQISDFS 272
>gi|335427390|ref|ZP_08554321.1| Rab family protein [Haloplasma contractile SSD-17B]
gi|334895063|gb|EGM33243.1| Rab family protein [Haloplasma contractile SSD-17B]
Length = 1451
Score = 45.4 bits (106), Expect = 0.050, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T ++ L N+S+L+ L LSN + S L N A L + L+ E F + L
Sbjct: 1118 TDLSVLANLSNLDSLYLSNNQV-SDLTPLINLANLQNVYLSNNQVTTLPENFSNMLN--L 1174
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
+ L +S + ++ L+ AL LDLS++ I D L N +L FS
Sbjct: 1175 NGLHLSGNQITDVTPLSTAPALIELDLSNNQITD------------LTNYDLLTYLFS-- 1220
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIKGF-----IQQVG 186
L+L+ I D ++ ++ + SL+ + +D+ + +
Sbjct: 1221 --------------LNLNDNSISDLTPLANLTKLSSLRLNNNQISDLTPLGGLTNLTHLY 1266
Query: 187 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
AE + + LT L NLN + L L Q+SD T LS+ +L +L + N +TD
Sbjct: 1267 AENNAISDLTPLTNLNKIWYLVLNGNQISDLT--ALSSLTDLSYLRMNNNQITD------ 1318
Query: 247 SSLSKLTNLSIRDAVLTNS 265
LS L NL + D L N+
Sbjct: 1319 --LSPLQNLRLSDLQLNNN 1335
>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 84 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 143
+ F+++MK L LD++ + IGD+ + ++ + +L +LN+ + G +++G + +
Sbjct: 10 KLKFISEMKHLTSLDIADNQIGDEGSKFISGM-KHLTSLNIDRNQIGVEGAKLISG-MKS 67
Query: 144 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 203
L LS+ QI +S M L +DI+ Q+G E ++ +
Sbjct: 68 LISLSIGDNQIGVEGAKLISGMKHLTSLDINRN-------QIGVE-----GAKSISRMKQ 115
Query: 204 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
L LN+ Q+ +S K+L L + + +S + +LT+L I + +
Sbjct: 116 LTSLNIYYNQIGAEGAKSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDIYNNQIG 175
Query: 264 NSGLGSFKPPRSLKLLDL 281
G S + L L++
Sbjct: 176 VEGAKSISGMKQLTSLNI 193
>gi|291560363|emb|CBL39163.1| Leucine Rich Repeat./Fibronectin type III domain
[butyrate-producing bacterium SSC/2]
Length = 643
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
G+ + E +A + +L+LSN S+ + +L G ++ L LSG +I + +
Sbjct: 72 GEITQEELAAFNGDEGSLDLSNKNLSN--IDLLKGLSDKIKELDLSGNKITEIPEGFFDN 129
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
M +L+++D+++ IK L A +N L +N+ +++ LS
Sbjct: 130 MTNLEYVDLNSNHIKA------------LPENAFKNTKKLNWINIRANNLTEIKKDTLSG 177
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+L++L L N S+T V L + L LSI
Sbjct: 178 LDKLVYLELDNNSITSVEAGALDGDTSLKQLSI 210
>gi|255028875|ref|ZP_05300826.1| internalin E [Listeria monocytogenes LO28]
gi|284800562|ref|YP_003412427.1| internalin E [Listeria monocytogenes 08-5578]
gi|284993748|ref|YP_003415516.1| internalin E [Listeria monocytogenes 08-5923]
gi|386049193|ref|YP_005967184.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404282695|ref|YP_006683592.1| internalin E [Listeria monocytogenes SLCC2372]
gi|405757251|ref|YP_006686527.1| internalin E [Listeria monocytogenes SLCC2479]
gi|284056124|gb|ADB67065.1| internalin E [Listeria monocytogenes 08-5578]
gi|284059215|gb|ADB70154.1| internalin E [Listeria monocytogenes 08-5923]
gi|346423039|gb|AEO24564.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404232197|emb|CBY53600.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235133|emb|CBY56535.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 499
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 84 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 134
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 135 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 189
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 190 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 233
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 234 YLEENQISDV-----SPLAKLPNLSI--VTLTN 259
>gi|430814079|emb|CCJ28639.1| unnamed protein product [Pneumocystis jirovecii]
Length = 568
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 54/238 (22%)
Query: 90 QMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEIL 147
+ + L LDL+S + I DD + ++ LRNL L+ + + GV +A N+ L
Sbjct: 312 RYEHLRILDLTSCTRITDDCIYHISVAIPKLRNLILAKCSNITDRGVMYIARLGKNIHFL 371
Query: 148 SLS-GTQIDDYAISYMSMMPS-LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
L + I D +I Y+S S L+++D++ IQ TDL S+ L +L L+
Sbjct: 372 HLGHCSAITDRSIIYLSRYCSRLRYLDLACC-----IQL----TDL--SICELASLPKLK 420
Query: 206 RLNLEQT-QVSDATLFPLSTFK------ELIHLSLRNASLTDVSLHQ----LSSLSKLTN 254
R+ L + ++D ++F L+ K E IHLS +++LH L++ KLT+
Sbjct: 421 RIGLVKCANITDLSIFALANHKTTENALERIHLSY----CVNLTLHAILELLNTCKKLTH 476
Query: 255 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVIC 312
LS+ +G+ F P QFC+ PR H+ +V C
Sbjct: 477 LSL-------TGVSQFLQPE-----------------FTQFCRPSPRDFNPHQQAVFC 510
>gi|255017074|ref|ZP_05289200.1| internalin E [Listeria monocytogenes FSL F2-515]
Length = 474
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 59 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 109
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 110 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 164
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 165 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 208
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 209 YLEENQISDV-----SPLAKLPNLSI--VTLTN 234
>gi|83629909|gb|ABC26616.1| internalin E [Listeria monocytogenes]
gi|83629919|gb|ABC26621.1| internalin E [Listeria monocytogenes]
gi|83629925|gb|ABC26624.1| internalin E [Listeria monocytogenes]
gi|83629945|gb|ABC26634.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 83 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 133
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 134 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 188
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 189 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 232
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 233 YLEENQISDV-----SPLAKLPNLSI--VTLTN 258
>gi|290992631|ref|XP_002678937.1| predicted protein [Naegleria gruberi]
gi|284092552|gb|EFC46193.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 72 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L++L++ N+ + +L ++K L + ++ ++ I E ++ + L+ L +
Sbjct: 16 LTYLNIQNNQIGSTGAKYLRELKQLTNPNIHTNDIDSKRAEYLSEL-KQLQTLEIGYNNI 74
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
SAGV L+ + L ++ +I + ++ + L ++DIS + FI +
Sbjct: 75 ESAGVEYLSS-IEQFSHLGVAANEIVTEGVKWLGNLKQLTYLDISCNQV--FIIGDDINS 131
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+ V LT +Q L +L+ + + D LS KEL HL++ ++++ +S L
Sbjct: 132 EEVEILTGMQQLQYLD---IGGNYIDDEGAKCLSKLKELKHLNVLRNAISEEGAQHISKL 188
Query: 250 SKLTNLSIRDAVLTNSGL 267
KLT L+I + + G+
Sbjct: 189 EKLTFLNIANNDIGYQGI 206
>gi|83629785|gb|ABC26554.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I N +
Sbjct: 157 APLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVN--------------D 199
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|254853465|ref|ZP_05242813.1| internalin C2 [Listeria monocytogenes FSL R2-503]
gi|258606836|gb|EEW19444.1| internalin C2 [Listeria monocytogenes FSL R2-503]
Length = 535
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + +++ L+L++T+ + V
Sbjct: 90 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGL-QSIKTLDLTSTQITD--V 144
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I N +
Sbjct: 145 APLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVN--------------D 187
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 188 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 243
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 244 VTLTNQTITN 253
>gi|160879955|ref|YP_001558923.1| leucine-rich repeat-containing protein [Clostridium phytofermentans
ISDg]
gi|160428621|gb|ABX42184.1| leucine-rich repeat protein [Clostridium phytofermentans ISDg]
Length = 772
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEI 146
L ++ LE+LD I D + +G NL+N+ L R + + L L LE+
Sbjct: 514 LNKLANLEYLDAGQLGIKD-----ITAIG-NLKNIRVLYLQRNLVSDISALK-KLTKLEV 566
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL---------SLTA 197
LSL+G QI+ +IS +S + +L+ + I IK I + T L+L ++ +
Sbjct: 567 LSLNGNQIE--SISALSTLTNLRELYIRENKIKN-ISSLNKLTKLILLEGGKNNLQNIDS 623
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
L+NL +++ L L+ + D T L L +L L N +T S++ L +LS L L +
Sbjct: 624 LKNLKNIKSLTLDNNIIKDIT--GLKVLTNLKYLDLSNNKIT--SINALKNLSGLETLYL 679
Query: 258 RDAVLTNSGLGSFKPPRSLKLLDLHG 283
+ +T+ + + + LKLL ++G
Sbjct: 680 QRNSITD--ISAISTLKKLKLLSMNG 703
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 19/114 (16%)
Query: 140 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 199
+L N++ L+L I D I+ + ++ +LK++D+SN I S+ AL+
Sbjct: 626 NLKNIKSLTLDNNIIKD--ITGLKVLTNLKYLDLSNNKI--------------TSINALK 669
Query: 200 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 252
NL+ LE L L++ ++D + +ST K+L LS+ ++DV L +L++L KL
Sbjct: 670 NLSGLETLYLQRNSITDIS--AISTLKKLKLLSMNGNKISDVKPLTKLANLEKL 721
>gi|429761802|ref|ZP_19294214.1| leucine Rich repeat-containing domain protein [Anaerostipes hadrus
DSM 3319]
gi|429182858|gb|EKY23938.1| leucine Rich repeat-containing domain protein [Anaerostipes hadrus
DSM 3319]
Length = 968
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 105 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 164
G+ + E +A + +L+LSN S+ + +L G ++ L LSG +I + +
Sbjct: 397 GEITQEELAAFNGDEGSLDLSNKNLSN--IDLLKGLSDKIKELDLSGNKITEIPEGFFDN 454
Query: 165 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 224
M +L+++D+++ IK L A +N L +N+ +++ LS
Sbjct: 455 MTNLEYVDLNSNHIKA------------LPENAFKNTKKLNWINIRANNLTEIKKDTLSG 502
Query: 225 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+L++L L N S+T V L + L LSI
Sbjct: 503 LDKLVYLELDNNSITSVEAGALDGDTSLKQLSI 535
>gi|45429999|ref|NP_991389.1| toll-like receptor 13 precursor [Mus musculus]
gi|81175031|sp|Q6R5N8.1|TLR13_MOUSE RecName: Full=Toll-like receptor 13; Flags: Precursor
gi|42716340|gb|AAS37674.1| toll-like receptor 13 [Mus musculus]
gi|109730803|gb|AAI17915.1| Toll-like receptor 13 [Mus musculus]
gi|109734930|gb|AAI17914.1| Toll-like receptor 13 [Mus musculus]
gi|148682113|gb|EDL14060.1| toll-like receptor 13 [Mus musculus]
Length = 991
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 41/320 (12%)
Query: 4 RLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 59
+L +L+L+ ++ L + L CL + T +SI+ + +P + +SL +F
Sbjct: 199 KLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMYLDH--SPRSLVSLTHLSF-- 254
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRF-------CFLTQMKALEHLDLSSSMIGDDSVEMV 112
E + S LS +++N S SR +L + L+ L+LS ++I +++
Sbjct: 255 EGNKLRELNFSALSLPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLS-- 312
Query: 113 ACVGANLRNLNLSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
A NLR ++LSN + + L G+LP LE L + I ++
Sbjct: 313 AKHLQNLRAMDLSNWELRHGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTR 372
Query: 168 LKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
L F+D+ G +DL+ L+ + L L++LNL + Q+S S+ +
Sbjct: 373 LLFLDL------------GQNSDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQ 420
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 286
L L L + S L L LS+ +T +F +LK L+L W+
Sbjct: 421 NLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWI 480
Query: 287 LTED--AILQFCKMHPRIEV 304
+T D + QF P +EV
Sbjct: 481 VTIDRYSFTQF----PNLEV 496
>gi|347549464|ref|YP_004855792.1| internalin peptidoglycan linked protein [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982535|emb|CBW86538.1| Internalin, putative peptidoglycan linked protein (LPXTG motif)
[Listeria ivanovii subsp. ivanovii PAM 55]
Length = 558
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 32/181 (17%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN---LSNTRFSSAGVGILAGHLPNL 144
L M LE+L + + I D S + NL LN L N + S + +LA +L ++
Sbjct: 134 LANMTDLEYLSIPGNQISDISSLL------NLTKLNHVELENNQISD--ISVLA-NLTDI 184
Query: 145 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 204
+ L+L+ QI D IS + + L ++ IK ++AL NL +L
Sbjct: 185 DYLTLATNQISD--ISAVGNLTKLTYLTARKNKIK--------------DISALANLTNL 228
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
LN+ + Q+S+ + LS KE+ L + + ++DVS ++S+ KL NL I D +T+
Sbjct: 229 GLLNVSKNQISEVS--ALSNLKEITILDIDHNQISDVS--PIASMDKLRNLVISDNQITD 284
Query: 265 S 265
+
Sbjct: 285 A 285
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L+ +++ N+ +S L + +++L L+++ I D ++ VG NL L R +
Sbjct: 162 LNHVELENNQISDISVLANLTDIDYLTLATNQISD-----ISAVG-NLTKLTYLTARKNK 215
Query: 132 -AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
+ LA +L NL +L++S QI + +S +S + + +DI + I
Sbjct: 216 IKDISALA-NLTNLGLLNVSKNQISE--VSALSNLKEITILDIDHNQIS----------- 261
Query: 191 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
++ + +++ L L + Q++DA+ PL++ +L L + N +TD+S +
Sbjct: 262 ---DVSPIASMDKLRNLVISDNQITDAS--PLASLPQLTSLVMSNNQITDIS--AFGGKN 314
Query: 251 KLTNLSIRDAVLTN 264
+L NL + + TN
Sbjct: 315 QLINLEASNQMYTN 328
>gi|298360724|gb|ADI77941.1| truncated internalin A [Listeria monocytogenes]
Length = 403
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 203 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 255
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTAL 198
LSL+G Q+ D I ++ + +L +D++N I G T+L L +++ L
Sbjct: 256 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPL 313
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 314 AGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 363
>gi|12054796|emb|CAC20636.1| internalin E [Listeria monocytogenes]
Length = 499
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 84 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 134
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 135 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 189
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 190 SFGSTQVS--------------DLTPLANLSKLTALNAMNSKVSDVS--PLTGLSNLTEV 233
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 234 YLEENQISDV-----SPLAKLPNLSI--VTLTN 259
>gi|389600592|ref|XP_001563125.2| putative surface antigen protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504433|emb|CAM37448.2| putative surface antigen protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 912
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 36/248 (14%)
Query: 24 LECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 82
L+ + C + L + + + L ++++ G+ I + S + +L V+ L
Sbjct: 123 LQSIVFVGCNVSGTLPASWSALSSLTELTIQGSGSITGSLPPEWSSMSSIEWLKVAEEQL 182
Query: 83 S-----RFCFLTQMKALEHLDLSSSMIGDDSVE---MVACVGANLRNLNLSNT---RFSS 131
S + +T +K LE L ++SS+ G E M A + + N LS T +SS
Sbjct: 183 SGTLPAEWGTMTSLKMLE-LSVASSITGTLPPEWSGMTALLYLYVDNSLLSGTLPPEWSS 241
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
+P L+ +S GTQ+ Y + + +L+ + ++NT I G +
Sbjct: 242 ---------MPRLKDVSFRGTQVSGYLPAEWQSLKTLRRVYLTNTSISGTLP-------- 284
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+ L LE++ L+ T+VS TL P S+ L HL L ++S++ + SS+S
Sbjct: 285 ----VSWAILKSLEQVYLQGTRVS-GTLPPEWSSMPSLAHLLLTSSSVSGTLPPEWSSMS 339
Query: 251 KLTNLSIR 258
K+ LS++
Sbjct: 340 KMRFLSVQ 347
>gi|131888548|ref|NP_001076447.1| leucine rich repeat and Ig domain containing 4a [Danio rerio]
Length = 618
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 91 MKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
++ L LDLS++M+ +E+ A VG NL L LS R VG +G LPN++ L +
Sbjct: 94 LRQLRELDLSANML--TVIEVEAFVGLQNLITLRLSRNRLKIIPVGAFSG-LPNVQFLDI 150
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 209
S +I MPSL+ ++ S D+ + +S A L +L L L
Sbjct: 151 SENEILVLLDDMFGEMPSLQKLEASENDL------------VFISNRAFSGLPNLLELRL 198
Query: 210 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
E+ ++ S L HL LT + + L +L +L +
Sbjct: 199 ERCNLTTVPSEAFSRLTGLQHLRFCRLGLTALPNNSFRQLQRLQDLHV 246
>gi|294358393|gb|ADE73849.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 191
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 192 SF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDI 244
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ + I ++ + +L +D++N I G T
Sbjct: 245 TPLGILT----NLDELSLNGNQLKE--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS- 355
Query: 244 HQLSSLSKLTNL 255
+SSL+KL L
Sbjct: 356 -PVSSLTKLQRL 366
>gi|255520544|ref|ZP_05387781.1| internalin H (LPXTG motif) [Listeria monocytogenes FSL J1-175]
Length = 548
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 103 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I N +
Sbjct: 158 APLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVN--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 201 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|300764607|ref|ZP_07074599.1| internalin C2 [Listeria monocytogenes FSL N1-017]
gi|404279818|ref|YP_006680716.1| internalin C2 [Listeria monocytogenes SLCC2755]
gi|404285635|ref|YP_006692221.1| internalin C2 [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|300514714|gb|EFK41769.1| internalin C2 [Listeria monocytogenes FSL N1-017]
gi|404226453|emb|CBY47858.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244564|emb|CBY02789.1| internalin C2 (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 548
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 134
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 103 LELKDNQITDLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 157
Query: 135 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 194
LAG L NL++L L QI + IS ++ + +L+++ I N +
Sbjct: 158 APLAG-LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNNQVN--------------D 200
Query: 195 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 254
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 201 LTPLANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 256
Query: 255 LSIRDAVLTN 264
+++ + +TN
Sbjct: 257 VTLTNQTITN 266
>gi|440798171|gb|ELR19239.1| calponin (CH) domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 918
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 65 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA---CVGANLRN 121
L+I T LL L R F K +E + LS + + D+ VA L +
Sbjct: 664 LHISTGLLKIL--------RTLF-ENHKEVERVSLSGTDLDDEKTAHVAKFLTAVPGLVS 714
Query: 122 LNLSNTRFSSAGVGILAGHL---PNLEILSLSGTQIDDYAISYMSMM----PSLKFIDIS 174
LNLSN R S GV LA L ++++L+L+ +IDD ++ + L+ + ++
Sbjct: 715 LNLSNNRIGSKGVSKLAETLSTHKHIKVLNLARNEIDDEGFQRLAAVFKHNVDLEQVTLT 774
Query: 175 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS----TFKELIH 230
I GA + A +L L RL+L + Q+ D F L+ T L+
Sbjct: 775 RNKI------TGASGSFTEAAQAFSSLEKLSRLSLNRNQLGDEAAFELAKVFQTHPSLVV 828
Query: 231 LSLRNASLTDVS----LHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+ L+N + L + + +T +S+ ++ N L + K
Sbjct: 829 VKLQNNKIGTAGAAAIFDALKANTSVTQVSLSYNLIGNDALSNLK 873
>gi|87308228|ref|ZP_01090370.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
gi|87289310|gb|EAQ81202.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
Length = 438
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 78 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV- 134
+ +S F L +++ LE ++ + +I A +G L NLN N R S +
Sbjct: 124 TKASSDSFFGLEELRKLEQVEFTDLVINQ------AVIGGLRGLPNLNQFNIRNSELALP 177
Query: 135 -GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIKGFIQQVGAET 189
+ P L+ L + G + D I + +P+L+ + +S I F +
Sbjct: 178 WALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLSCPVGQFTINDFRRLADLPN 237
Query: 190 DLVLSLT-----------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 238
+ LSL A Q L +++LN+ QT + + L + F L L L + +
Sbjct: 238 LVDLSLVRSSLPDESCPLATQQLK-IQKLNVGQTGIGNQFLSTIGDFPNLRELDLTGSKI 296
Query: 239 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 282
TD L LS LS+L +L++ + ++++ F +SL+ L LH
Sbjct: 297 TDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLRELHLH 340
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 72 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
L LD++ S ++ +L+++ LE L LS + I + + + + +LR L+L NT+
Sbjct: 286 LRELDLTGSKITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQL-QSLRELHLHNTKL 344
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 189
+ +A L NLE + LS + + + + +P L+ + + NT I GA
Sbjct: 345 DGQAMVDIA-KLKNLEWIDLSKSNVQGEQLLELRKLPKLRGVVLMNTPI-------GAA- 395
Query: 190 DLVLSLTALQNLNHLERLNLEQTQVSD 216
L L+ L H++ + +E+T +++
Sbjct: 396 ----DLPYLKQLYHIDEIYVEETNLTN 418
>gi|83629947|gb|ABC26635.1| internalin E [Listeria monocytogenes]
gi|83629949|gb|ABC26636.1| internalin E [Listeria monocytogenes]
gi|83629971|gb|ABC26647.1| internalin E [Listeria monocytogenes]
gi|83629973|gb|ABC26648.1| internalin E [Listeria monocytogenes]
gi|83629975|gb|ABC26649.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L++ ++ ++ LT + + L LS + + D S
Sbjct: 83 AGITTI---EGLQYLTN--LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS---- 133
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G NL+ ++L T + V LAG L NL++L+L QI D I+ ++ + +L+F+
Sbjct: 134 ALAGLKNLKTMDLIYTDITD--VTPLAG-LSNLQVLNLDINQITD--ITPLAGLSNLQFL 188
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+T + LT L NL+ L LN ++VSD + PL+ L +
Sbjct: 189 SFGSTQVS--------------DLTPLANLSKLTTLNAMNSKVSDVS--PLTGLSNLTEV 232
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
L ++DV S L+KL NLSI LTN
Sbjct: 233 YLEENQISDV-----SPLAKLPNLSI--VTLTN 258
>gi|342181731|emb|CCC91210.1| putative leucine-rich repeat protein (LRRP) [Trypanosoma congolense
IL3000]
Length = 537
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 44/216 (20%)
Query: 124 LSNTRFSSA-----GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN--- 175
L RF GVG L G +P L ILSL T + D + + SL + + +
Sbjct: 131 LEEARFDGCRNVVKGVGEL-GRVPYLHILSLRETGVTDQCLQGLCCSRSLVELSLESCVH 189
Query: 176 -TDIKGFIQQVGA--------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
TD+ G + Q+ +++ + L + L+ L++ +T+V+D TL+ L
Sbjct: 190 ITDV-GPLHQIDTLKAINLDRCENVIKGIGELGKMPRLQTLSMRETRVTDETLYSLRNNY 248
Query: 227 ELIHLSLRNA-SLTDVS-------LHQ---------------LSSLSKLTNLSIRDAVLT 263
L+ ++L S+TDVS L + LS L L LS+R + +T
Sbjct: 249 SLVEITLECCLSITDVSPLSTIVTLQRINLGGCRNVVKGAGPLSKLPDLHELSVRGSAIT 308
Query: 264 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 299
+S + +SL+ LDL +T+ +L C++
Sbjct: 309 DSCVSDLSESKSLRRLDLSSCENVTD--VLPCCRIK 342
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 139 GHLPNLEILSLSGTQIDDYAISYMSMMPSL-KFIDISNTDIKGFIQQVGAET-------- 189
G +P L+ LSL T + D ++S + SL K + S + +T
Sbjct: 79 GRMPRLQTLSLKDTVVTDASLSGLRFSRSLVKLLVESCAQLTDVAPVAAVKTLEEARFDG 138
Query: 190 --DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVS-LHQ 245
++V + L + +L L+L +T V+D L L + L+ LSL + +TDV LHQ
Sbjct: 139 CRNVVKGVGELGRVPYLHILSLRETGVTDQCLQGLCCSRSLVELSLESCVHITDVGPLHQ 198
Query: 246 LSSLSKLTNLSIRDAVLTNSGLGSF-KPPR 274
+ +L K NL + V+ G+G K PR
Sbjct: 199 IDTL-KAINLDRCENVI--KGIGELGKMPR 225
>gi|440290254|gb|ELP83680.1| F-box/leucine rich repeat protein, putative [Entamoeba invadens
IP1]
Length = 652
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 72 LSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSVE-MVACVGANLRNLNLSNTRF 129
L LD+SN ++ L ++K LE L + + + ++++ ++ +L+ + +++ F
Sbjct: 356 LRVLDISNCGAIKVLSPLDELKNLEILKMKNVEVNKNTLDGLLQNPSQHLKQITVASDSF 415
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 179
A V + +P+L++L+L + I + + ++P ++FID+S+T++K
Sbjct: 416 DDALVSLCCTKIPSLKVLNLEHSHITTKGLESLEIIPFIRFIDLSSTEVK 465
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 34/259 (13%)
Query: 61 REAFLY-IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS------SMIGDDSVEMVA 113
++ F+Y I + L L++++S++S + + + L HL + S + +
Sbjct: 268 KDGFIYLIGCNALHILNITSSNVSEY-HMEVIGRLRHLRVVSFKGCTLLTDNALLLLRES 326
Query: 114 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF--- 170
V N+ LNLS+T S G+ +++ L NL +L +S AI +S + LK
Sbjct: 327 IVAGNILELNLSDTLISHIGLQVVSS-LKNLRVLDISNCG----AIKVLSPLDELKNLEI 381
Query: 171 -----IDISNTDIKGFIQQ---------VGAET--DLVLSLTALQNLNHLERLNLEQTQV 214
++++ + G +Q V +++ D ++SL + + L+ LNLE + +
Sbjct: 382 LKMKNVEVNKNTLDGLLQNPSQHLKQITVASDSFDDALVSLCCTK-IPSLKVLNLEHSHI 440
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPP 273
+ L L + + L + + D QLS L ++ ++ + +T G+ K
Sbjct: 441 TTKGLESLEIIPFIRFIDLSSTEVKDEVFGQLSKALCLESIVMKRCLNITGEGIKQLKTL 500
Query: 274 RSLKLLDLHGGWLLTEDAI 292
L++L+L+G LT+ AI
Sbjct: 501 YGLRVLNLNGCKQLTDSAI 519
>gi|390630346|ref|ZP_10258331.1| Internalin F [Weissella confusa LBAE C39-2]
gi|390484465|emb|CCF30679.1| Internalin F [Weissella confusa LBAE C39-2]
Length = 706
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L +L ++ + L+ L M+ L L + S+ + D +A + NL L++ N R S
Sbjct: 164 LRYLGLAGNKLTSVQALAGMRQLTELKVGSNQLTD--YTPIASL-TNLTTLSIGNNR--S 218
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 191
+ +L L NLE + S + + A+ S MP L + I F Q+
Sbjct: 219 NDISMLR-SLVNLEEATFSQMGLTNNAVQIFSYMPKLVTLSID------FNDQIS----- 266
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
LT L L L+ LN + +V+D L PL L LS NA + + L L+ L+K
Sbjct: 267 --DLTPLAGLRQLQSLNFSKDRVAD--LTPLKQMTNLTDLSFSNAQVAN--LAPLAGLTK 320
Query: 252 LTNLSI 257
LT+L++
Sbjct: 321 LTSLNM 326
>gi|406831706|ref|ZP_11091300.1| peptidase M56 BlaR1 [Schlesneria paludicola DSM 18645]
Length = 1125
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 24/321 (7%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREA 63
L ++L V +L + L LS +I D +L+ N P+ ++ L + ++
Sbjct: 805 LKNVDLTPASVARLGATKHISTLELSGRSINDELLQAISN-LPIGRLELGSGPYTDDGVK 863
Query: 64 FLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
L +L S + ++ S++ CF L ++ L + L SS + +A + +LR
Sbjct: 864 QLANCVALES-ISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLARI-PDLRR 921
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKG 180
+ +S T + +G + L + +G DD + P L+ I N+ I
Sbjct: 922 MTISTTEQLTFDLGPFS----ELRSVDFTGATFGDDLTHALAEKCPRLEEASIRNSSITN 977
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
+ AL L HL L L++ Q+ D + L L L N + D
Sbjct: 978 ------------AGVAALVPLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGD 1025
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 300
+L S S+L+ L++ ++N GL ++++ L L LT++ + K P
Sbjct: 1026 RTLAAASGCSRLSYLNLGQTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHL-KQLP 1084
Query: 301 RIEVWHELSVICPSDQIGSNG 321
+ L + QI NG
Sbjct: 1085 DYRMKFVLHLQLDGTQITKNG 1105
>gi|297171917|gb|ADI22904.1| hypothetical protein [uncultured Rhizobium sp. HF0500_35F13]
Length = 412
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 181
L+LS+T G+ + L L++L LSGT+I D S +S + L + S G
Sbjct: 75 LDLSDTSVGDDGM-VHINKLEGLQVLVLSGTEITDTGFSQLSNLSDLNQLTASELMGDG- 132
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+ AL + L L++ QV+D+ L LS K L L+L ++TD
Sbjct: 133 ------------TTAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRTAITDK 180
Query: 242 SLHQLSSLSKLTNLSIRDAVLTN 264
L L S++ L +L + + +T+
Sbjct: 181 GLEHLQSITVLRDLQLNNTKITD 203
>gi|444725325|gb|ELW65894.1| Toll-like receptor 13 [Tupaia chinensis]
Length = 950
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 29/286 (10%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 73
V LP LE L+L+N +I S+ + L +SL G + + L + L+
Sbjct: 178 AVQHLP---CLEHLDLTNNSIMSLDHSPTSLVSLTYLSLQGNKLMELNFSVLSLPN--LT 232
Query: 74 FLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFS 130
LDVS +S +L + L+ L+LS + +EM++ NLR ++LSN
Sbjct: 233 TLDVSRNSHQAIQNVYLETLPQLKSLNLSGVQV---QLEMLSVKHLQNLREIDLSNGELR 289
Query: 131 SAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
S + + L +L LE L D I +++ L F+D+
Sbjct: 290 SGHLNLSTVCHLLRNLLILETLVFQKNATDAGGIKHLANCTRLLFLDL------------ 337
Query: 186 GAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
G +DLV L+ + + L+RL+L + Q+S + S+ + L L L +
Sbjct: 338 GQTSDLVDLNDSEFNAMPSLQRLHLNKCQLSFVSNRTWSSLQNLTALDLSHNMFNSFPDF 397
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 290
S L L +LS+ +T +FK SLK L+L G W++ D
Sbjct: 398 AFSPLKCLQSLSLSRNPITELNNMAFKGLNSLKELNLAGCWIVAID 443
>gi|85679291|gb|ABC72061.1| InlE [Listeria monocytogenes]
Length = 498
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 33/213 (15%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L+++++ ++ L + + L LS + + D S
Sbjct: 83 AGITTI---EGMQYLTN--LSELELTDNQITDVSLLANLTKITELGLSGNPLKDVS---- 133
Query: 113 ACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
A G +L+ L+L T + V LAG L NL+ L+L QI D IS ++ + +L+ +
Sbjct: 134 ALAGLKSLKMLHLIYTDITD--VTSLAG-LTNLQELNLDINQITD--ISPLAALTNLQTL 188
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 231
+ G+ Q V LT + NL+ L LN E ++VSD + PL++ L +
Sbjct: 189 SL------GYTQ--------VSDLTPIANLSKLTILNAENSKVSD--ISPLASLSSLTEV 232
Query: 232 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
LR ++DVS L+++ L+ + + D ++TN
Sbjct: 233 YLRENQISDVS--PLANIPNLSIIELTDQIITN 263
>gi|46447589|ref|YP_008954.1| hypothetical protein pc1955 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401230|emb|CAF24679.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 454
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 143 NLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
NL++L L Q I D +++++++ SL+ +++ + A + LTALQ
Sbjct: 221 NLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFC-----VNLTDAGLAHLTPLTALQ-- 273
Query: 202 NHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 259
LNL +++DA L L+ +L HL+L + +LTD L L+ L+ L L++
Sbjct: 274 ----HLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTPLTALLYLNLSK 329
Query: 260 AV-LTNSGLGSFKPPRSLKLLDLHGGWLLTE 289
LTN GL P L+ L+L W LT+
Sbjct: 330 CYHLTNVGLAHLAPLTGLQYLNLKWCWNLTD 360
>gi|290975907|ref|XP_002670683.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284084244|gb|EFC37939.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 285
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 90 QMKALEHLDLSSSMIGDDSVEMVAC----VGANLRNLNLSNTRFSSAGVGILAGHLPNLE 145
Q + L++++ IG + E+ C + +L L++S F+ + ++ P L
Sbjct: 90 QGQFLQNIENLKVRIGTIAFELFDCRLFGLMKHLTQLDVSVNLFTFSQAKLIGELAPQLT 149
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 205
L++S I Y ++S + L ++IS I Q GA+ A+ NL +L
Sbjct: 150 NLNISHNTIGVYGAKHISKLKHLTILNISGN----LIGQQGAK--------AISNLEYLT 197
Query: 206 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 265
LN+ + + + + K+L L + N + + + L+ L +LT L I + + +
Sbjct: 198 ELNISNNSIFEEGVKFIGEMKQLRTLDIHNNMIEEKGVEHLTQLEQLTKLDISNNSIGAN 257
Query: 266 GLGSFKPPRSLKLLDL 281
G+ + L +LD+
Sbjct: 258 GVKYLTKMKQLTILDV 273
>gi|85679295|gb|ABC72063.1| InlE [Listeria monocytogenes]
Length = 498
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 31/212 (14%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L+++++ ++ L + + L LS + + D V +
Sbjct: 83 AGITTI---EGMQYLTN--LSELELTDNQITDVSPLANLTKITELGLSGNPLKD--VSAI 135
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
A + + L+ L+L T + V LAG L NL+ L+L QI D IS ++ + +L+ +
Sbjct: 136 AGLKS-LKMLHLIYTDITD--VTSLAG-LTNLQELNLDINQITD--ISPLAALTNLQTLS 189
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+ G+ Q V LT L NL+ L LN E ++VSD + PL++ L +
Sbjct: 190 L------GYTQ--------VSDLTPLANLSKLTILNAENSKVSD--ISPLASLSSLAEVY 233
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
LR ++DVS L+++ L+ + + D ++TN
Sbjct: 234 LRENQISDVS--PLANIPNLSIIELTDQIITN 263
>gi|17542472|ref|NP_499896.1| Protein SMA-10, isoform a [Caenorhabditis elegans]
gi|351064240|emb|CCD72526.1| Protein SMA-10, isoform a [Caenorhabditis elegans]
Length = 881
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 84 RFCFLTQMKALEHLDLSSSMIG--DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 141
RF Q+ +L+++ L+ + + DD + AC G L++LNLS R + G + G L
Sbjct: 235 RFLAFNQLPSLQNVSLARNDVYRLDDGM-FYACEG--LKHLNLSTNRVQAVTEGWMFG-L 290
Query: 142 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLSLTA 197
+LE+L LS QI + IS S P LK++ + + I+ G + + +L+LS +
Sbjct: 291 TSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANS 350
Query: 198 LQNLNHL 204
+ +L+
Sbjct: 351 IDSLHKF 357
>gi|91086515|ref|XP_971643.1| PREDICTED: similar to CG11136 CG11136-PA [Tribolium castaneum]
Length = 714
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
L + L+ LDLSS+ + S+E + G NL ++LS+ + V LP L+I
Sbjct: 136 LKPLPELDRLDLSSNKL--KSLEATSFKGLRNLSFIDLSDNMLTKI-VPNTFDDLPQLKI 192
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET--------DLVLS---- 194
L L G ++ I+ ++ + +++ ID+S ++ G +G +T D+ LS
Sbjct: 193 LRLRGNRLTIQTITKLNPLRTVEEIDLSGNNLVG---PLGPKTFPKMENLRDIQLSHNSL 249
Query: 195 ----LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 250
+ ALQ LN L L+L+ Q+ S L+ L L + + VS L+ L+
Sbjct: 250 SSIKMGALQGLNKLTSLSLQHNQIDVLEDHAFSHLTSLVSLVLAHNRIVAVSGASLAHLN 309
Query: 251 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
KLT+L +R L P +SLK L L
Sbjct: 310 KLTDLDLRFNFLRALTADLILPLKSLKNLKL 340
>gi|18413537|emb|CAD21866.1| hypothetical leucine-rich repeat protein 1 (LRRP1) [Trypanosoma
brucei]
Length = 1393
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 69/296 (23%)
Query: 13 TGVTKLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
+ V L NI +LE L+L CT ID+ + N L + L+GT NE L + ++
Sbjct: 474 SNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTV 533
Query: 72 LSFLDVSNS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 130
+S L++S+ ++ ++ ++AL L+LS+ C G N
Sbjct: 534 VS-LNLSHCWKMTNVSHISSLEALNELNLSN------------CFGIN------------ 568
Query: 131 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 190
AG + L L + LS T I D IS+ S +L +D+S F ++
Sbjct: 569 -AGWEAIE-KLQQLHVAILSNTHITDRDISHFSNCKNLITLDLS------FCNKL----- 615
Query: 191 LVLSLTALQNLNHLERLNLEQ------------------------TQVSDATLFPLSTFK 226
L +TAL N+ LE LNL+ Q+ D+ + L
Sbjct: 616 --LDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGN 673
Query: 227 ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 281
+ LSL N DV+ LS+L L L++ SG+G+ L++LDL
Sbjct: 674 SFVRLSLENCKGFGDVA--PLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 727
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 118/288 (40%), Gaps = 50/288 (17%)
Query: 13 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 72
T T + +S+LE LNLSNC I T I L + L
Sbjct: 262 TDATPISQLSALEELNLSNCHI--------------------TKGIGTLGMLLRLRILDL 301
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
S + V ++ L C +LE L++S + D + + LNL+ R +
Sbjct: 302 SGVPVEDNCLKDLC---DCGSLERLNISYRIQLTDINPLSN--ATAIEELNLNGCRRITR 356
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------- 181
G+G++ LP L +L + + + ++ S+ + +S + GF
Sbjct: 357 GIGVVWA-LPKLRVLHMKDVHLSEPSLD--SVGTGGPLVKVSLDNCAGFGDMTLLSSIVT 413
Query: 182 -----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
IQ+ D++ + L L +L LN+++ +S + K L+ L++
Sbjct: 414 LEELNIQKCA---DIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNME-- 468
Query: 237 SLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 283
S+T +S + L+++ L LS+ ++G+G LK+LDL G
Sbjct: 469 SITGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 516
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 63/275 (22%)
Query: 2 FPRLSFLNLAWTG-----VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 56
PRL LN+ + L N +S L+L NC +G + APL+ +
Sbjct: 648 LPRLCVLNIKGVQLEDSVIVSLGNGNSFVRLSLENC------KGFGDVAPLSNL------ 695
Query: 57 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ +E L + D S + L Q++ L DL + + D+S+E +
Sbjct: 696 --------VTLEELNLHYCDKVTSGMGTLGRLLQLRVL---DLGRTQVDDNSLENICTCS 744
Query: 117 ANLRNLNLSNTRFSSAGVGILA----------------------GHLPNLEILSLSGTQI 154
+ L +LNLSN + ++ I + G L L + +LS T+
Sbjct: 745 SPLVSLNLSNCKKITSISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRT 804
Query: 155 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 214
+D I ++S SL ++++ F + + TD +TAL + LE LNL+
Sbjct: 805 NDENIRHVSECKSLNTLNLA------FCKDI---TD----VTALSKITMLEELNLDCCHN 851
Query: 215 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+ L T + LS++ + D Q S L
Sbjct: 852 IRKGIETLGTLPKARILSMKECYMGDGYAQQCSIL 886
>gi|887862|gb|AAA69530.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 22/174 (12%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEI 146
L + LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+
Sbjct: 129 LANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDE 181
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVLSLTALQN---- 200
LSL+G Q+ D I ++ + +L +D++N I G T+L L + N
Sbjct: 182 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLPGLTKLTELKLGANQISNIXPL 239
Query: 201 --LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 252
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 240 AGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDIS--PVSSLTKL 289
>gi|887026|gb|AAA69527.1| internalin, partial [Listeria monocytogenes]
Length = 346
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 31/249 (12%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--L 72
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL L
Sbjct: 63 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQL 119
Query: 73 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS- 131
SF + ++ L + LE LD+S + + D SV +A + NL +L +N + S
Sbjct: 120 SF----GNQVTDLXPLANLTTLERLDISXNKVSDISV--LAKL-TNLESLIATNNQISDI 172
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--T 189
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T
Sbjct: 173 TPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLXGLTKLT 226
Query: 190 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D+S
Sbjct: 227 ELKLGANQISNISPLAGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDIS- 283
Query: 244 HQLSSLSKL 252
+SSL+KL
Sbjct: 284 -PVSSLTKL 291
>gi|290892592|ref|ZP_06555585.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404406718|ref|YP_006689433.1| internalin E [Listeria monocytogenes SLCC2376]
gi|290557901|gb|EFD91422.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404240867|emb|CBY62267.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 499
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 31/212 (14%)
Query: 53 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
AG T I E Y+ LS L+++++ ++ L + + L LS + + D V +
Sbjct: 84 AGITTI---EGMQYLTN--LSELELTDNQITDVSPLANLTKITELGLSGNPLKD--VSAI 136
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 172
A + + L+ L+L T + V LAG L NL+ L+L QI D IS ++ + +L+ +
Sbjct: 137 AGLKS-LKMLHLIYTDITD--VTSLAG-LTNLQELNLDINQITD--ISPLAALTNLQTLS 190
Query: 173 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
+ G+ Q V LT L NL+ L LN E ++VSD + PL++ L +
Sbjct: 191 L------GYTQ--------VSDLTPLANLSKLTILNAENSKVSD--ISPLASLSSLAEVY 234
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
LR ++DVS L+++ L+ + + D ++TN
Sbjct: 235 LRENQISDVS--PLANIPNLSIIELTDQIITN 264
>gi|356551924|ref|XP_003544322.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 652
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 46/219 (21%)
Query: 85 FCFLTQMKALEHLDLS-------------------------SSMIGDDSVEMVACVGANL 119
F F+ + + LE LD++ SMI D+ ++ +A + L
Sbjct: 399 FLFIGRCQLLEELDVTDTEIDDQGLQSISRCTKLSSLKLGICSMITDNGLKHIASSCSKL 458
Query: 120 RNLNL-SNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNT- 176
+ L+L ++R + G+ +A P+LE+++++ + D ++ ++S L+ ++I
Sbjct: 459 KQLDLYRSSRITDEGIVAIALGCPSLEVVNIAYNSNTTDTSLEFLSKCQKLRTLEIRGCP 518
Query: 177 --DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKE-LIHLS 232
KG V +LE L++++ +++D + L+ + L H+
Sbjct: 519 RISPKGLSNIVA-------------RCRYLEMLDIKKCHKINDTGMIQLAQHSQNLKHIK 565
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSF 270
L S+TDV L L+S+S L ++SI LT++GL +F
Sbjct: 566 LSYCSVTDVGLIALASISCLQHISIFHVEGLTSNGLAAF 604
>gi|405976717|gb|EKC41213.1| hypothetical protein CGI_10020123 [Crassostrea gigas]
Length = 1521
Score = 45.1 bits (105), Expect = 0.063, Method: Composition-based stats.
Identities = 73/291 (25%), Positives = 111/291 (38%), Gaps = 47/291 (16%)
Query: 9 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK---ISLAGTTFINEREAFL 65
NL LPN L LN+SN I S+ G P + I T I E++
Sbjct: 925 NLELKAFDGLPN---LLYLNISNNQITSLQMGFFRFTPKLRHLIIQNNNITEIPVSESYN 981
Query: 66 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 125
+ +SL LD+ N+ L Q +L L S ++ LRN N++
Sbjct: 982 RLNSSL-ELLDLQNNKL----MTIQPSSLYWLKSVSKIV--------------LRNNNIT 1022
Query: 126 NTR--FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 183
NT FS++ + L L LS I + + + SL+++++ N I
Sbjct: 1023 NTDLYFSTS--------MKMLYELDLSYNFIQNITDYMFNGLSSLRYLNLQNNLIA---- 1070
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
+L + LN L LNL Q+ L L+L L ++
Sbjct: 1071 --------ILDGFSFSTLNSLRTLNLAFNQIHTINRMAFENLVSLTKLNLTGNKLRTITP 1122
Query: 244 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 294
+ L KL L + D L N G+FK S+K L++H L + Q
Sbjct: 1123 IRFVPLVKLEILDLSDNGLRNLEYGAFKGLESVKHLNIHSNKLTVSRTMFQ 1173
>gi|348525620|ref|XP_003450320.1| PREDICTED: leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein
1-like [Oreochromis niloticus]
Length = 604
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 152
L+ LDLS ++I +E+ A +G NLR L + N R VG+ +G L +L L LS
Sbjct: 82 LQELDLSDNII--SMIEVEAFLGLQNLRTLRIKNNRLKIIPVGVFSG-LSSLNFLDLSQN 138
Query: 153 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQ 211
+I L F+D + ++ E DLV +S A L +L+ LNL++
Sbjct: 139 EI-------------LVFLDYTFKEMVNLQTLEAGENDLVFISQRAFFGLQNLQELNLDR 185
Query: 212 ---TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL--TNLSIRDAVLTNSG 266
T + L L + L L L ++L + + +L L L TN D + NS
Sbjct: 186 SNLTSIPTEALSQLQSLTRLRMLRLTISTLPNNAFRKLQHLRSLLITNWPALDTIAGNSL 245
Query: 267 LG 268
+G
Sbjct: 246 IG 247
>gi|290980745|ref|XP_002673092.1| predicted protein [Naegleria gruberi]
gi|284086673|gb|EFC40348.1| predicted protein [Naegleria gruberi]
Length = 498
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 14/223 (6%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 146
++ +MK L+ L ++++ IG + + ++ + L LN+ + G ++ + L +
Sbjct: 172 YIGEMKQLKQLHIANNNIGPEGAKYISGL-EQLTFLNIRANEITVDGAKFIS-EMKQLTV 229
Query: 147 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN-- 200
L++ G I D ++S M L +DIS +I ++ ++ T L + ++ +
Sbjct: 230 LNIIGNNICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLNIGFNSINDGV 289
Query: 201 -----LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ L LN+ + + +S+F +L HLS+ ++ +S + L L
Sbjct: 290 KCFGEMKQLTDLNVNSRCIGSNGVEYISSFNQLTHLSIAKNLISLYEAMHISQMKNLIKL 349
Query: 256 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 298
I D + ++G+ S L L++ +T I CKM
Sbjct: 350 DISDNDIGDNGVQSISEMNQLTELNV-SSIDITPIGIQYICKM 391
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVA--------------------CVG--ANLRNLNL 124
F++ MK L +LD+S + IG++ + V+ C G L +LN+
Sbjct: 244 FISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLNIGFNSINDGVKCFGEMKQLTDLNV 303
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
++ S GV ++ L LS++ I Y ++S M +L +DIS+ DI
Sbjct: 304 NSRCIGSNGVEYISS-FNQLTHLSIAKNLISLYEAMHISQMKNLIKLDISDNDIGDN--- 359
Query: 185 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
+ ++ +N L LN+ ++ + + L +L + ++
Sbjct: 360 ---------GVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLISAHNNIGAKGAK 410
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF-CKM 298
Q+S + L LSI + + G L LD+ G+ D ++F C M
Sbjct: 411 QISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDI--GYNEIGDEGVKFLCGM 463
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,261,068,657
Number of Sequences: 23463169
Number of extensions: 201078584
Number of successful extensions: 624312
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 9040
Number of HSP's that attempted gapping in prelim test: 595371
Number of HSP's gapped (non-prelim): 29939
length of query: 384
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 240
effective length of database: 8,980,499,031
effective search space: 2155319767440
effective search space used: 2155319767440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)