Query 016690
Match_columns 384
No_of_seqs 262 out of 1032
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 17:49:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016690.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016690hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hksa_ a.4.5.22 (A:) Heat-sho 100.0 1.5E-36 1.1E-40 253.0 7.0 95 44-138 2-106 (106)
2 d2htsa_ a.4.5.22 (A:) Heat-sho 100.0 9.4E-31 6.8E-35 212.7 3.0 78 46-123 2-90 (92)
3 d1pp7u_ a.4.5.44 (U:) 39 kda i 94.5 0.0045 3.3E-07 50.2 1.1 74 47-128 28-110 (114)
4 d1awca_ a.4.5.21 (A:) GA bindi 91.7 0.031 2.2E-06 44.8 1.9 56 53-108 7-63 (110)
5 d1flia_ a.4.5.21 (A:) Fli-1 {H 91.4 0.034 2.5E-06 43.7 1.8 59 50-108 9-68 (98)
6 d1duxc_ a.4.5.21 (C:) Elk-1 {H 90.3 0.035 2.5E-06 42.6 0.9 56 53-108 7-64 (86)
7 d1gvja_ a.4.5.21 (A:) ETS-1 tr 89.2 0.029 2.1E-06 46.8 -0.4 71 38-108 31-102 (142)
8 d1hbxg_ a.4.5.21 (G:) Serum re 85.5 0.09 6.5E-06 44.3 0.5 68 53-120 10-82 (155)
9 d1puee_ a.4.5.21 (E:) Transcri 84.0 0.11 7.7E-06 40.0 0.2 54 53-107 8-67 (88)
10 d1wwxa1 a.4.5.21 (A:8-101) E74 79.9 0.33 2.4E-05 37.5 1.7 56 53-108 8-66 (94)
11 d1yo5c1 a.4.5.21 (C:247-334) S 77.9 0.24 1.8E-05 37.9 0.4 58 53-110 9-69 (88)
12 d1seta1 a.2.7.1 (A:1-110) Sery 45.3 39 0.0029 25.1 7.8 50 161-210 40-90 (110)
13 d1lrza1 a.2.7.4 (A:245-309) Me 43.6 47 0.0034 23.1 8.9 51 165-215 5-61 (65)
14 d1wc9a_ d.278.1.2 (A:) Traffic 42.8 15 0.0011 29.9 5.2 64 47-111 64-135 (161)
15 d1q8ha_ g.32.1.1 (A:) Osteocal 41.0 4.3 0.00031 25.3 1.0 12 371-382 15-26 (37)
16 d1zyma1 a.60.10.1 (A:22-144) E 29.2 1.1E+02 0.0078 22.9 9.1 55 178-232 18-73 (123)
17 d1ivsa1 a.2.7.3 (A:797-862) Va 25.7 90 0.0066 20.9 7.4 26 161-186 2-27 (66)
18 d1nkpa_ a.38.1.1 (A:) Myc prot 24.6 63 0.0046 22.9 5.5 22 165-186 54-75 (88)
19 d1ivsa1 a.2.7.3 (A:797-862) Va 22.1 80 0.0058 21.2 5.4 18 209-226 18-35 (66)
20 d1jyaa_ d.198.1.1 (A:) YopE ch 21.8 22 0.0016 27.7 2.4 29 55-83 66-94 (117)
No 1
>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila melanogaster [TaxId: 7227]}
Probab=100.00 E-value=1.5e-36 Score=252.95 Aligned_cols=95 Identities=41% Similarity=0.787 Sum_probs=90.3
Q ss_pred CCCCchHHHHHHHhcCCCCCCeEEEcCCCCeEEEeCCchhhhhhccCCcCCCChhhHHhhhccccccccC----------
Q 016690 44 AGPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVD---------- 113 (384)
Q Consensus 44 ~~~~~Fl~KL~~ml~d~~~~~iIsWs~~G~sFiI~d~~~F~~~vLp~~Fkh~nfsSFvRQLN~YGF~Kv~---------- 113 (384)
+++|+||.|||+||+||++++||+|+++|++|||+|+.+|++.|||+||+|+||+||+||||+|||+|+.
T Consensus 2 ~~vp~F~~KL~~ml~~~~~~~iI~W~~~G~~fiI~d~~~f~~~vLp~~Fk~~~~~SF~RQLn~yGF~kv~~~~~~~~~~~ 81 (106)
T d1hksa_ 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCCCcHHHHHHHHHhCcCCCCEEEEcCCCCEEEEcCHHHHHHHHhhhhccccCHHHHHHHHHHCCCEEeeccccccccCC
Confidence 4679999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred CCCccccCCCcCcCcccchhhhccc
Q 016690 114 PDRWEFANEGFLGGQKHLLKTIKRR 138 (384)
Q Consensus 114 ~~~~eF~h~~F~Rg~~~LL~~IkRk 138 (384)
++.++|+||+|+||+|+||..|+||
T Consensus 82 ~~~~~f~h~~F~Rg~p~ll~~IkRr 106 (106)
T d1hksa_ 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCccEEECccccCCCHHHHhhCcCC
Confidence 3568999999999999999999986
No 2
>d2htsa_ a.4.5.22 (A:) Heat-shock transcription factor {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=99.96 E-value=9.4e-31 Score=212.72 Aligned_cols=78 Identities=49% Similarity=0.931 Sum_probs=73.7
Q ss_pred CCchHHHHHHHhcCCCCCCeEEEcCCCCeEEEeCCchhhhhhccCCcCCCChhhHHhhhccccccccC-----------C
Q 016690 46 PPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVD-----------P 114 (384)
Q Consensus 46 ~~~Fl~KL~~ml~d~~~~~iIsWs~~G~sFiI~d~~~F~~~vLp~~Fkh~nfsSFvRQLN~YGF~Kv~-----------~ 114 (384)
.|+||.|||+||+||++++||+|+++|++|+|+|+..|++.|||+||+|+||+||+||||+|||+|+. +
T Consensus 2 ~P~F~~kL~~~l~~~~~~~iI~W~~~G~~f~I~d~~~f~~~vLp~~F~~~~~~SF~RQLn~yGF~kv~~~~~~~~~~~~~ 81 (92)
T d2htsa_ 2 RPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSMLSNND 81 (92)
T ss_dssp CCHHHHHHHHHHHCGGGTTTCEECTTSSSEEESCHHHHHHHTHHHHCTTCCHHHHHHHHHHTTEECCCCSCTTC----CC
T ss_pred CCChHHHHHHHHcCcCCCCEEEEeCCCCEEEEeCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCeEEeecCCCCCcccCCC
Confidence 48899999999999999999999999999999999999999999999999999999999999999984 3
Q ss_pred CCccccCCC
Q 016690 115 DRWEFANEG 123 (384)
Q Consensus 115 ~~~eF~h~~ 123 (384)
+.|+|+|+.
T Consensus 82 ~~~eF~h~~ 90 (92)
T d2htsa_ 82 SRWEFENER 90 (92)
T ss_dssp CCEEEEESC
T ss_pred CCEEEecCC
Confidence 579999984
No 3
>d1pp7u_ a.4.5.44 (U:) 39 kda initiator binding protein, IBP39, N-terminal domain {Trichomonas vaginalis [TaxId: 5722]}
Probab=94.53 E-value=0.0045 Score=50.19 Aligned_cols=74 Identities=14% Similarity=0.295 Sum_probs=53.5
Q ss_pred CchHHHHHHHhc----CCCCCCe--EEEcCCCCeEEEeCCchhhhhhccCCcCCCChhhHHhhhccccccccCCC---Cc
Q 016690 47 PPFLTKTYEMVE----DLSTDAI--VSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVDPD---RW 117 (384)
Q Consensus 47 ~~Fl~KL~~ml~----d~~~~~i--IsWs~~G~sFiI~d~~~F~~~vLp~~Fkh~nfsSFvRQLN~YGF~Kv~~~---~~ 117 (384)
..|+.|||.+|. +|++... |.|.+++. |.| +...|+..+ -.+-.|.-.-|..|||..+.++ .|
T Consensus 28 ~rF~~KL~naL~~t~~~P~~~~~iGv~Wi~d~~-f~V-nk~~fa~lL------giK~ntlN~Nfr~~gF~q~~~d~~~~~ 99 (114)
T d1pp7u_ 28 SRFPRKLHMLLTYLASNPQLEEEIGLSWISDTE-FKM-KKKNVALVM------GIKLNTLNVNLRDLAFEQLQHDKGGWT 99 (114)
T ss_dssp GSHHHHHHHHHHHHTTCHHHHHHHTEEESSSSC-EEE-CHHHHHHHH------TCCHHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCchHHHHHHHHHHHhChhhhhccceEEecCCE-EEE-ehHHHHHHH------CCChhhhcCcccccCceeeecCCCcce
Confidence 579999999996 4443222 79999996 655 888999754 2234666777888999988543 35
Q ss_pred cccCCCcCcCc
Q 016690 118 EFANEGFLGGQ 128 (384)
Q Consensus 118 eF~h~~F~Rg~ 128 (384)
.+.++.|.|..
T Consensus 100 ~w~~~~F~~nS 110 (114)
T d1pp7u_ 100 QWKRSGFTRNS 110 (114)
T ss_dssp EEECTTEETTE
T ss_pred eeccCCccccc
Confidence 57889997754
No 4
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.74 E-value=0.031 Score=44.77 Aligned_cols=56 Identities=18% Similarity=0.257 Sum_probs=43.0
Q ss_pred HHHHhcCCCCCCeEEEcCCCCeEEEeCCchhhhhhcc-CCcCCCChhhHHhhhcccc
Q 016690 53 TYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLP-KYFKHSNFSSFIRQLNTYG 108 (384)
Q Consensus 53 L~~ml~d~~~~~iIsWs~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG 108 (384)
|.++|.||++.++|+|...+.-|.+.|+++.++.-=. +-=...||...-|-|..|.
T Consensus 7 L~~LL~d~~~~~~I~Wt~~~geFkl~d~e~VA~lWG~~Knk~~M~YeklSRaLRyYY 63 (110)
T d1awca_ 7 LLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 63 (110)
T ss_dssp HHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGG
T ss_pred HHHHHcCcccCCCcEEECCCCEEEeCCHHHHHHHHHHhhCCCcccHHHHHHHHHHHH
Confidence 5778999999999999998889999999888763111 1223567888888887773
No 5
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.37 E-value=0.034 Score=43.66 Aligned_cols=59 Identities=19% Similarity=0.292 Sum_probs=43.6
Q ss_pred HHHHHHHhcCCCCCCeEEEcCCCCeEEEeCCchhhhhhcc-CCcCCCChhhHHhhhcccc
Q 016690 50 LTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLP-KYFKHSNFSSFIRQLNTYG 108 (384)
Q Consensus 50 l~KL~~ml~d~~~~~iIsWs~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG 108 (384)
..=|.++|.|+++.++|+|...+.-|.+.|+++.++.-=. +-=...||...-|-|..|-
T Consensus 9 w~FL~~LL~d~~~~~~I~W~~~~geFkl~~~~~VA~lWG~~Knk~~M~YeklSRaLRyYY 68 (98)
T d1flia_ 9 WQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYY 68 (98)
T ss_dssp HHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHhcCcccCCceEEECCCCEEEeCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Confidence 3446778999999999999887778999999888763211 1112468888888887764
No 6
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.30 E-value=0.035 Score=42.62 Aligned_cols=56 Identities=18% Similarity=0.332 Sum_probs=42.0
Q ss_pred HHHHhcCCCCCCeEEEcC-CCCeEEEeCCchhhhhhc-cCCcCCCChhhHHhhhcccc
Q 016690 53 TYEMVEDLSTDAIVSWSR-TRNSFIVWDSHQFSTTLL-PKYFKHSNFSSFIRQLNTYG 108 (384)
Q Consensus 53 L~~ml~d~~~~~iIsWs~-~G~sFiI~d~~~F~~~vL-p~~Fkh~nfsSFvRQLN~YG 108 (384)
|.++|.|+++.++|+|.. ++.-|.+.|+++.++.== -+.=...||...-|-|..|-
T Consensus 7 L~~LL~d~~~~~~I~Wt~k~~g~Fklv~~~~VA~lWG~~Knk~~MnYeklSRaLRyyY 64 (86)
T d1duxc_ 7 LLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRALRYYY 64 (86)
T ss_dssp HHHHHHHCSSSSSCEEEETTTTEEECTTHHHHHHHHHHTTTCSCCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCceEeccCCCCEEEecCHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 456788999999999998 688999999988886321 12222468888888887763
No 7
>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.15 E-value=0.029 Score=46.76 Aligned_cols=71 Identities=23% Similarity=0.343 Sum_probs=50.0
Q ss_pred cccCCCCCCCchHHHHHHHhcCCCCCCeEEEcCCCCeEEEeCCchhhhhhcc-CCcCCCChhhHHhhhcccc
Q 016690 38 LEGLHDAGPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLP-KYFKHSNFSSFIRQLNTYG 108 (384)
Q Consensus 38 ~e~~~~~~~~~Fl~KL~~ml~d~~~~~iIsWs~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG 108 (384)
..|....+...--.=|.++|.|+++.++|+|...+-.|.+.|+++.++.-=. +-=...||...-|-|..|-
T Consensus 31 ~~~~~~~g~i~LWqFLleLL~d~~~~~~I~Wt~~~~eFkl~d~e~VA~lWG~~Knk~~MnYeKmSRALRyYY 102 (142)
T d1gvja_ 31 LAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYY 102 (142)
T ss_dssp HHHHHTCCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHH
T ss_pred ccCCCCCCeeeHHHHHHHHHcCCccCCccEEECCCCeEEeCCHHHHHHHHHhhcCCCCccHHHHhHHHHHHh
Confidence 3333334445455557789999999999999998888999999998863211 1122467888888887764
No 8
>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.54 E-value=0.09 Score=44.35 Aligned_cols=68 Identities=13% Similarity=0.337 Sum_probs=50.4
Q ss_pred HHHHhcCCCCCCeEEEcCCCCeEEEeCCchhhhhhcc-CCcCCCChhhHHhhhcccc----ccccCCCCcccc
Q 016690 53 TYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLP-KYFKHSNFSSFIRQLNTYG----FRKVDPDRWEFA 120 (384)
Q Consensus 53 L~~ml~d~~~~~iIsWs~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG----F~Kv~~~~~eF~ 120 (384)
|.++|.||++.++|+|...+.-|.+.|+++.++.-=. +.=...||...-|-|..|- .+||...+..|.
T Consensus 10 L~~LL~d~~~~~~I~Wt~~~geFkl~~~~~VA~lWG~rKnk~~M~YeklSRaLRyYY~k~il~Kv~g~r~~Yk 82 (155)
T d1hbxg_ 10 LLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 82 (155)
T ss_dssp TTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred HHHHHcCccCCCceEEECCCCEEEeCCHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCCEeeccCceeEEE
Confidence 4567899999999999998889999999998874211 2224578899999988874 334555666664
No 9
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.03 E-value=0.11 Score=39.98 Aligned_cols=54 Identities=13% Similarity=0.269 Sum_probs=37.3
Q ss_pred HHHHhcCCCCCCeEEEcCCCC-eEEEe--CCchhhhhhcc--C-CcCCCChhhHHhhhccc
Q 016690 53 TYEMVEDLSTDAIVSWSRTRN-SFIVW--DSHQFSTTLLP--K-YFKHSNFSSFIRQLNTY 107 (384)
Q Consensus 53 L~~ml~d~~~~~iIsWs~~G~-sFiI~--d~~~F~~~vLp--~-~Fkh~nfsSFvRQLN~Y 107 (384)
|.++|.||++.++|+|...+. .|-+. ++++.++. -. + .=...||...-|-|..|
T Consensus 8 L~~LL~d~~~~~~I~Wt~~~~g~F~fv~~~~e~VA~l-WG~~K~Nr~~MnYeklSRaLRyY 67 (88)
T d1puee_ 8 LLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHR-WGIQKGNRKKMTYEKMARALRNY 67 (88)
T ss_dssp HHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHH-HHHHHTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHcCccCCCceEeeCCCCceEEEEeCCHHHHHHH-HHhhcCCCCCCcHHHHHHHHHHH
Confidence 567889999999999987664 46555 45556642 11 1 12356888998888877
No 10
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.93 E-value=0.33 Score=37.54 Aligned_cols=56 Identities=16% Similarity=0.236 Sum_probs=39.5
Q ss_pred HHHHhcCCCC-CCeEEEcCCC-CeEEEeCCchhhhhh-ccCCcCCCChhhHHhhhcccc
Q 016690 53 TYEMVEDLST-DAIVSWSRTR-NSFIVWDSHQFSTTL-LPKYFKHSNFSSFIRQLNTYG 108 (384)
Q Consensus 53 L~~ml~d~~~-~~iIsWs~~G-~sFiI~d~~~F~~~v-Lp~~Fkh~nfsSFvRQLN~YG 108 (384)
|.++|.||+. .++|+|..-+ .-|.+.|+++.++.= .-+-=...||...-|-|..|-
T Consensus 8 L~~LL~d~~~~~~~I~Wt~k~~g~Fkl~d~~~VA~lWG~~K~~~~M~YeklSRaLRyYY 66 (94)
T d1wwxa1 8 VRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYY 66 (94)
T ss_dssp HHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHH
T ss_pred HHHHHcCCccCCCeEEEEcCCCcEEEEcCHHHHHHHHHhhcCCCCCcHHHHHHHHHHHH
Confidence 5678888764 6799999844 579999998887631 011112478888888888774
No 11
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.91 E-value=0.24 Score=37.88 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=42.2
Q ss_pred HHHHhcCCC-CCCeEEEcCCCC-eEEEeCCchhhhhhcc-CCcCCCChhhHHhhhcccccc
Q 016690 53 TYEMVEDLS-TDAIVSWSRTRN-SFIVWDSHQFSTTLLP-KYFKHSNFSSFIRQLNTYGFR 110 (384)
Q Consensus 53 L~~ml~d~~-~~~iIsWs~~G~-sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YGF~ 110 (384)
|.++|.||+ +.++|+|...+. -|.+.|+++.++.==. +.=...||...-|-|..|--+
T Consensus 9 L~~LL~d~~~~~~~I~Wt~~~~g~Fkl~~~~~VA~lWG~~Knk~~M~YeklSRALRyYY~~ 69 (88)
T d1yo5c1 9 LKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKK 69 (88)
T ss_dssp HHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTT
T ss_pred HHHHHcCccccCCCeEEECCCCceEEecCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhc
Confidence 567788875 688999987665 7999999998863111 112467899999999888643
No 12
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=45.28 E-value=39 Score=25.07 Aligned_cols=50 Identities=12% Similarity=0.193 Sum_probs=24.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016690 161 LDGELERLKRDRNVLMAEIVRLRQ-HQQQSRDQLSAMEDRLLSTEKKQQQM 210 (384)
Q Consensus 161 l~~eie~LKrd~~~L~~El~~LrQ-qqq~~~~ql~~meeRl~~~E~kqqqm 210 (384)
+..+++.|+.+++.+..+|.+.+. .-.....++..+..++..++...+.+
T Consensus 40 l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~ 90 (110)
T d1seta1 40 LKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREK 90 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666677776666666654422 11223334444444444444444433
No 13
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=43.60 E-value=47 Score=23.07 Aligned_cols=51 Identities=12% Similarity=0.304 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016690 165 LERLKRDRNVLMAEIVRLRQHQ------QQSRDQLSAMEDRLLSTEKKQQQMMTFLA 215 (384)
Q Consensus 165 ie~LKrd~~~L~~El~~LrQqq------q~~~~ql~~meeRl~~~E~kqqqm~~FLa 215 (384)
+..|+.+...|..+|.++.... ....+++..++.++...+.++...-.|..
T Consensus 5 l~~L~~~~~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~Ea~~li~ 61 (65)
T d1lrza1 5 IKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQE 61 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888888898887654 24567777777777777777776665544
No 14
>d1wc9a_ d.278.1.2 (A:) Trafficking protein particle complex subunit 3, Bet3 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.81 E-value=15 Score=29.94 Aligned_cols=64 Identities=16% Similarity=0.330 Sum_probs=45.8
Q ss_pred CchHHH-HHHHhcCCCCCCeEEEcCCCCeEEEe-CCchhhhh-hccCCcCCCChhhHHhh-----hccccccc
Q 016690 47 PPFLTK-TYEMVEDLSTDAIVSWSRTRNSFIVW-DSHQFSTT-LLPKYFKHSNFSSFIRQ-----LNTYGFRK 111 (384)
Q Consensus 47 ~~Fl~K-L~~ml~d~~~~~iIsWs~~G~sFiI~-d~~~F~~~-vLp~~Fkh~nfsSFvRQ-----LN~YGF~K 111 (384)
..|+.| .|.++=.-.-+ ...|+.+|+.|++. +..-|..- -+|.-.+.-+|++|+.= |+.-||..
T Consensus 64 l~fI~~~~wk~~fgk~~d-~l~~~~~~~~~~~i~~~npl~~fv~lP~~~~~l~y~~f~cGiIrGaL~~~g~~~ 135 (161)
T d1wc9a_ 64 ADVIAKVAFKMYLGITPS-ITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAV 135 (161)
T ss_dssp HHHHHHTHHHHHHSCCCE-EECCCTTSCEEEEEESCCGGGTTCCCCTTCTTCCTTTHHHHHHHHHHHTTTEEE
T ss_pred HHHHHHHHHHHHcCCCcc-cceecCCCCeEEEEecCCCccceEEcCcccCCceehhhHHHHHHHHHHHCCCeE
Confidence 468888 89998775444 78999999977665 33445443 36877777788999764 67778864
No 15
>d1q8ha_ g.32.1.1 (A:) Osteocalcin {Pig (Sus scrofa) [TaxId: 9823]}
Probab=40.98 E-value=4.3 Score=25.25 Aligned_cols=12 Identities=25% Similarity=0.792 Sum_probs=11.0
Q ss_pred hhHHHHHHhhCC
Q 016690 371 EELQDLVDQMGY 382 (384)
Q Consensus 371 ~~~~~l~~~~~~ 382 (384)
-|+++|++|+||
T Consensus 15 pdcdelad~igf 26 (37)
T d1q8ha_ 15 PDCDELADHIGF 26 (37)
T ss_dssp HHHHHHHHHHCH
T ss_pred CCHHHHHHHhhH
Confidence 589999999997
No 16
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=29.18 E-value=1.1e+02 Score=22.92 Aligned_cols=55 Identities=13% Similarity=0.145 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCchHHHHHHhhHH
Q 016690 178 EIVRLRQHQQQSRDQLSAMEDRLLSTE-KKQQQMMTFLAKALKNPSFFQQLAQSNA 232 (384)
Q Consensus 178 El~~LrQqqq~~~~ql~~meeRl~~~E-~kqqqm~~FLak~~qnp~fi~ql~~~~~ 232 (384)
|+.+|++-...+..+|..+.++....- .....|+..-.-++++|.|+......-.
T Consensus 18 E~~rl~~A~~~~~~~L~~l~~~~~~~~~~e~a~If~ah~~iL~D~~l~~~v~~~I~ 73 (123)
T d1zyma1 18 EVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIK 73 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 444555555555555555555554332 2345678888888999999988876553
No 17
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=25.70 E-value=90 Score=20.91 Aligned_cols=26 Identities=15% Similarity=0.122 Sum_probs=19.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 016690 161 LDGELERLKRDRNVLMAEIVRLRQHQ 186 (384)
Q Consensus 161 l~~eie~LKrd~~~L~~El~~LrQqq 186 (384)
++.|+.+|.++...+..++.++....
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~~~~kL 27 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAERSQRKL 27 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888877777776543
No 18
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.59 E-value=63 Score=22.94 Aligned_cols=22 Identities=18% Similarity=0.309 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016690 165 LERLKRDRNVLMAEIVRLRQHQ 186 (384)
Q Consensus 165 ie~LKrd~~~L~~El~~LrQqq 186 (384)
|..|+.....|..++..|++++
T Consensus 54 I~~L~~~~~~l~~~~~~l~~~~ 75 (88)
T d1nkpa_ 54 ILSVQAEEQKLISEEDLLRKRR 75 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444433
No 19
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.14 E-value=80 Score=21.21 Aligned_cols=18 Identities=17% Similarity=0.336 Sum_probs=11.5
Q ss_pred HHHHHHHHHhcCchHHHH
Q 016690 209 QMMTFLAKALKNPSFFQQ 226 (384)
Q Consensus 209 qm~~FLak~~qnp~fi~q 226 (384)
.-+.-+.+-++||.|+..
T Consensus 18 ~~i~~~~~kL~N~~F~~k 35 (66)
T d1ivsa1 18 ALAERSQRKLASPGFREK 35 (66)
T ss_dssp HHHHHHHHHHTSTTHHHH
T ss_pred HHHHHHHHHHCChHHHHh
Confidence 344455667788888753
No 20
>d1jyaa_ d.198.1.1 (A:) YopE chaperone SycE {Yersinia pestis [TaxId: 632]}
Probab=21.81 E-value=22 Score=27.70 Aligned_cols=29 Identities=14% Similarity=0.471 Sum_probs=23.4
Q ss_pred HHhcCCCCCCeEEEcCCCCeEEEeCCchh
Q 016690 55 EMVEDLSTDAIVSWSRTRNSFIVWDSHQF 83 (384)
Q Consensus 55 ~ml~d~~~~~iIsWs~~G~sFiI~d~~~F 83 (384)
.+.++.....++.|++++..||+|+....
T Consensus 66 N~FSqd~~kPvl~~d~~~~~~vLWnRqp~ 94 (117)
T d1jyaa_ 66 NIFSQDILKPILSWDEVGGHPVLWNRQPL 94 (117)
T ss_dssp GSCCSCTTCCEEEEETTTTEEEEEEEEEG
T ss_pred hhccccccCcceeeCcCCCceeEEecCch
Confidence 44556667889999999999999987543
Done!