Query 016691
Match_columns 384
No_of_seqs 298 out of 2694
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 17:49:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 1.9E-27 6.5E-32 229.2 19.5 210 143-378 18-227 (323)
2 2v8q_E 5'-AMP-activated protei 99.9 2.8E-24 9.5E-29 207.8 16.4 208 143-378 23-230 (330)
3 2qrd_G Protein C1556.08C; AMPK 99.9 6.7E-23 2.3E-27 198.3 22.1 208 141-378 8-222 (334)
4 1z0n_A 5'-AMP-activated protei 99.9 1.8E-23 6.3E-28 167.4 10.9 86 16-106 6-91 (96)
5 2qlv_B Protein SIP2, protein S 99.9 6.1E-23 2.1E-27 191.4 11.1 88 19-107 2-89 (252)
6 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.3E-22 7.9E-27 192.7 12.4 121 18-155 167-289 (294)
7 4esy_A CBS domain containing m 99.9 1.6E-22 5.4E-27 177.7 7.6 157 142-316 5-163 (170)
8 3kh5_A Protein MJ1225; AMPK, A 99.8 8.4E-21 2.9E-25 178.1 14.9 182 156-378 4-185 (280)
9 3ddj_A CBS domain-containing p 99.8 4.1E-20 1.4E-24 175.7 11.4 173 154-378 92-264 (296)
10 3kh5_A Protein MJ1225; AMPK, A 99.8 1.2E-19 3.9E-24 170.3 14.1 176 154-378 83-260 (280)
11 3ddj_A CBS domain-containing p 99.8 2.8E-20 9.4E-25 176.9 8.9 176 154-379 19-194 (296)
12 3t4n_C Nuclear protein SNF4; C 99.8 1.3E-18 4.3E-23 167.4 14.0 179 157-378 116-299 (323)
13 3i8n_A Uncharacterized protein 99.8 1.2E-18 4.1E-23 145.8 11.6 127 152-315 3-129 (130)
14 3k6e_A CBS domain protein; str 99.8 2.2E-18 7.4E-23 149.8 12.7 138 148-319 9-146 (156)
15 2yzq_A Putative uncharacterize 99.8 1.7E-18 5.8E-23 162.9 12.3 184 154-378 59-258 (282)
16 3lv9_A Putative transporter; C 99.8 5.3E-18 1.8E-22 144.9 13.8 127 152-316 20-146 (148)
17 3hf7_A Uncharacterized CBS-dom 99.8 3.1E-18 1E-22 143.7 11.7 127 155-316 2-128 (130)
18 2yzq_A Putative uncharacterize 99.8 9.2E-19 3.1E-23 164.7 9.4 161 156-378 2-163 (282)
19 2v8q_E 5'-AMP-activated protei 99.8 5.2E-18 1.8E-22 163.7 13.6 182 157-378 120-302 (330)
20 3lhh_A CBS domain protein; str 99.7 1.1E-17 3.8E-22 147.1 12.3 129 152-318 39-167 (172)
21 3nqr_A Magnesium and cobalt ef 99.7 3.4E-18 1.2E-22 142.4 8.2 124 154-314 2-125 (127)
22 3oco_A Hemolysin-like protein 99.7 5.9E-18 2E-22 145.7 9.3 128 152-317 17-145 (153)
23 3jtf_A Magnesium and cobalt ef 99.7 5.6E-18 1.9E-22 141.6 8.7 125 153-316 3-127 (129)
24 2ef7_A Hypothetical protein ST 99.7 2.2E-17 7.6E-22 138.0 12.3 129 152-319 1-129 (133)
25 3lqn_A CBS domain protein; csg 99.7 1E-17 3.4E-22 143.2 10.2 139 149-319 9-147 (150)
26 3lfr_A Putative metal ION tran 99.7 2.5E-18 8.5E-23 145.2 5.6 128 154-317 2-129 (136)
27 1vr9_A CBS domain protein/ACT 99.7 1.2E-17 4.2E-22 152.2 10.1 160 154-379 12-171 (213)
28 2qrd_G Protein C1556.08C; AMPK 99.7 2.6E-17 8.9E-22 158.9 12.6 180 159-378 111-294 (334)
29 3ocm_A Putative membrane prote 99.7 6.5E-17 2.2E-21 142.8 14.0 128 152-318 33-160 (173)
30 2p9m_A Hypothetical protein MJ 99.7 3.7E-17 1.3E-21 137.4 11.9 129 149-315 2-136 (138)
31 3kpb_A Uncharacterized protein 99.7 2.9E-17 1E-21 135.1 10.6 119 156-315 2-120 (122)
32 3gby_A Uncharacterized protein 99.7 1.3E-17 4.6E-22 138.8 8.6 123 154-315 4-126 (128)
33 3ctu_A CBS domain protein; str 99.7 5.7E-17 1.9E-21 139.5 12.8 138 150-320 10-147 (156)
34 2d4z_A Chloride channel protei 99.7 1.1E-16 3.8E-21 149.7 15.5 151 152-315 10-246 (250)
35 2rih_A Conserved protein with 99.7 1.5E-16 5.2E-21 134.5 13.6 122 155-315 5-128 (141)
36 3fhm_A Uncharacterized protein 99.7 3.5E-17 1.2E-21 142.5 9.6 132 151-317 20-152 (165)
37 1pbj_A Hypothetical protein; s 99.7 2.7E-16 9.3E-21 129.6 14.2 121 156-315 2-122 (125)
38 3fv6_A YQZB protein; CBS domai 99.7 3.2E-16 1.1E-20 135.6 14.8 140 145-319 7-148 (159)
39 2yzi_A Hypothetical protein PH 99.7 1E-16 3.4E-21 134.9 10.7 130 151-318 3-132 (138)
40 2o16_A Acetoin utilization pro 99.7 2.3E-16 7.8E-21 136.8 13.2 134 154-317 4-137 (160)
41 1o50_A CBS domain-containing p 99.7 4.1E-16 1.4E-20 134.5 14.5 137 150-316 11-154 (157)
42 4gqw_A CBS domain-containing p 99.7 5.9E-17 2E-21 137.9 8.7 143 153-317 3-145 (152)
43 2rc3_A CBS domain; in SITU pro 99.7 1.6E-16 5.5E-21 133.2 11.0 125 156-316 7-132 (135)
44 4fry_A Putative signal-transdu 99.7 1.9E-16 6.5E-21 136.3 11.4 128 155-318 7-138 (157)
45 2uv4_A 5'-AMP-activated protei 99.7 3.6E-16 1.2E-20 134.1 12.9 136 147-314 15-150 (152)
46 3k2v_A Putative D-arabinose 5- 99.7 1.4E-16 4.9E-21 136.2 10.2 121 155-311 28-148 (149)
47 3sl7_A CBS domain-containing p 99.7 1.3E-16 4.5E-21 139.9 9.6 155 154-319 3-160 (180)
48 2pfi_A Chloride channel protei 99.7 2.5E-16 8.6E-21 136.0 11.1 138 152-317 10-149 (164)
49 2j9l_A Chloride channel protei 99.7 2E-16 7E-21 139.4 10.6 158 150-319 6-169 (185)
50 3oi8_A Uncharacterized protein 99.7 8.4E-17 2.9E-21 139.1 7.7 121 152-310 35-155 (156)
51 2nyc_A Nuclear protein SNF4; b 99.7 6.4E-16 2.2E-20 130.4 12.1 132 154-315 7-141 (144)
52 1y5h_A Hypothetical protein RV 99.7 1.5E-16 5E-21 133.0 8.1 126 152-315 5-131 (133)
53 2emq_A Hypothetical conserved 99.7 3.9E-16 1.3E-20 134.1 10.4 137 151-319 7-143 (157)
54 1yav_A Hypothetical protein BS 99.6 5.4E-16 1.9E-20 133.9 11.0 136 152-319 11-146 (159)
55 3kxr_A Magnesium transporter, 99.6 1.1E-15 3.7E-20 138.7 12.9 133 143-318 40-177 (205)
56 1pvm_A Conserved hypothetical 99.6 1E-15 3.6E-20 135.7 10.9 125 155-315 9-133 (184)
57 3l2b_A Probable manganase-depe 99.6 5E-15 1.7E-19 137.2 12.0 148 154-313 6-242 (245)
58 2oux_A Magnesium transporter; 99.5 3.6E-14 1.2E-18 135.1 12.7 131 145-318 125-262 (286)
59 3pc3_A CG1753, isoform A; CBS, 99.5 4.6E-14 1.6E-18 145.5 11.6 131 152-317 381-513 (527)
60 2yvy_A MGTE, Mg2+ transporter 99.5 8.4E-14 2.9E-18 131.8 12.4 122 153-317 133-259 (278)
61 4aee_A Alpha amylase, catalyti 99.5 2.4E-14 8.3E-19 152.2 9.5 84 14-100 11-102 (696)
62 4esy_A CBS domain containing m 99.5 4.4E-14 1.5E-18 123.5 7.1 110 256-378 23-142 (170)
63 3org_A CMCLC; transporter, tra 99.4 2.1E-14 7E-19 151.1 2.9 155 153-315 451-625 (632)
64 3usb_A Inosine-5'-monophosphat 99.4 8.4E-12 2.9E-16 127.9 20.8 129 143-315 104-234 (511)
65 2zy9_A Mg2+ transporter MGTE; 99.4 1.3E-12 4.4E-17 132.9 12.9 128 146-316 144-278 (473)
66 1me8_A Inosine-5'-monophosphat 99.4 1.2E-13 4.2E-18 141.4 5.2 163 152-377 93-260 (503)
67 3lhh_A CBS domain protein; str 99.3 2.6E-12 9E-17 112.5 9.8 95 256-378 47-143 (172)
68 3lv9_A Putative transporter; C 99.3 3.9E-12 1.3E-16 108.1 9.7 95 256-378 28-124 (148)
69 3k2v_A Putative D-arabinose 5- 99.3 4.1E-12 1.4E-16 108.2 8.7 98 256-378 33-132 (149)
70 2o16_A Acetoin utilization pro 99.3 5.7E-12 1.9E-16 108.9 9.4 105 256-378 10-115 (160)
71 3kpb_A Uncharacterized protein 99.3 4.3E-12 1.5E-16 103.8 8.1 94 256-378 6-99 (122)
72 3i8n_A Uncharacterized protein 99.3 3.9E-12 1.4E-16 105.8 7.7 96 256-378 11-108 (130)
73 1zfj_A Inosine monophosphate d 99.3 1.6E-11 5.5E-16 125.3 13.7 118 157-315 92-211 (491)
74 3k6e_A CBS domain protein; str 99.3 3.8E-12 1.3E-16 110.1 7.6 98 258-378 24-121 (156)
75 1pbj_A Hypothetical protein; s 99.3 1.3E-11 4.4E-16 101.3 9.7 97 256-378 6-102 (125)
76 3fv6_A YQZB protein; CBS domai 99.3 7.9E-12 2.7E-16 107.8 8.6 97 256-378 22-120 (159)
77 3fhm_A Uncharacterized protein 99.3 1.7E-11 5.8E-16 106.3 10.5 96 259-378 35-130 (165)
78 3oco_A Hemolysin-like protein 99.3 5.9E-12 2E-16 107.8 7.2 95 256-378 25-122 (153)
79 2ef7_A Hypothetical protein ST 99.3 1.4E-11 4.7E-16 102.5 9.2 96 256-378 9-104 (133)
80 3lfr_A Putative metal ION tran 99.3 3.2E-12 1.1E-16 107.4 5.2 96 257-378 9-106 (136)
81 3oi8_A Uncharacterized protein 99.3 1.1E-11 3.8E-16 106.6 8.7 95 256-378 43-139 (156)
82 3nqr_A Magnesium and cobalt ef 99.3 2.8E-12 9.6E-17 106.3 4.5 95 257-378 9-105 (127)
83 3hf7_A Uncharacterized CBS-dom 99.2 6.7E-12 2.3E-16 104.7 6.5 95 259-378 12-106 (130)
84 2rih_A Conserved protein with 99.2 3.2E-11 1.1E-15 101.4 10.4 97 256-378 10-107 (141)
85 3l2b_A Probable manganase-depe 99.2 1.2E-11 4.1E-16 114.3 8.5 54 256-315 12-65 (245)
86 3gby_A Uncharacterized protein 99.2 5E-12 1.7E-16 104.8 5.0 96 256-378 10-105 (128)
87 1pvm_A Conserved hypothetical 99.2 2.8E-11 9.7E-16 106.9 9.9 99 256-378 14-112 (184)
88 2rc3_A CBS domain; in SITU pro 99.2 1.7E-11 5.9E-16 102.2 7.7 95 259-378 17-111 (135)
89 1o50_A CBS domain-containing p 99.2 5.1E-11 1.7E-15 102.3 10.8 108 256-378 21-132 (157)
90 2nyc_A Nuclear protein SNF4; b 99.2 2.2E-11 7.6E-16 102.2 8.3 105 256-378 16-120 (144)
91 3jtf_A Magnesium and cobalt ef 99.2 9.5E-12 3.2E-16 103.4 5.7 93 257-378 11-105 (129)
92 4fxs_A Inosine-5'-monophosphat 99.2 9.1E-12 3.1E-16 127.2 6.6 117 156-314 90-208 (496)
93 2yzi_A Hypothetical protein PH 99.2 4.7E-11 1.6E-15 99.8 9.8 97 256-378 12-108 (138)
94 2pfi_A Chloride channel protei 99.2 1.7E-11 5.9E-16 105.3 7.0 110 256-378 18-127 (164)
95 4gqw_A CBS domain-containing p 99.2 5.8E-12 2E-16 106.7 3.7 111 256-378 10-122 (152)
96 3lqn_A CBS domain protein; csg 99.2 2.5E-11 8.5E-16 103.1 7.5 100 257-378 21-122 (150)
97 1y5h_A Hypothetical protein RV 99.2 1.2E-11 4.1E-16 102.8 5.1 97 257-378 14-111 (133)
98 4fry_A Putative signal-transdu 99.2 3.4E-11 1.2E-15 103.2 7.9 95 259-378 21-115 (157)
99 2d4z_A Chloride channel protei 99.2 7.6E-11 2.6E-15 110.0 10.8 58 255-316 17-74 (250)
100 2p9m_A Hypothetical protein MJ 99.2 2.8E-11 9.5E-16 101.1 6.9 97 256-378 13-115 (138)
101 4avf_A Inosine-5'-monophosphat 99.2 1.5E-11 5.2E-16 125.4 6.1 117 155-314 88-206 (490)
102 2uv4_A 5'-AMP-activated protei 99.2 9.4E-11 3.2E-15 100.1 9.7 102 259-378 29-130 (152)
103 1vrd_A Inosine-5'-monophosphat 99.2 3.4E-12 1.2E-16 130.4 0.6 119 156-316 96-216 (494)
104 3ocm_A Putative membrane prote 99.2 8.4E-11 2.9E-15 103.4 9.4 94 256-378 41-136 (173)
105 2j9l_A Chloride channel protei 99.1 9.8E-11 3.4E-15 102.7 8.9 114 261-378 25-145 (185)
106 3ctu_A CBS domain protein; str 99.1 4.4E-11 1.5E-15 102.4 6.3 100 256-378 20-121 (156)
107 4af0_A Inosine-5'-monophosphat 99.1 5.9E-12 2E-16 127.1 0.0 108 166-313 147-256 (556)
108 3sl7_A CBS domain-containing p 99.1 6.1E-11 2.1E-15 103.5 6.0 115 257-378 10-135 (180)
109 2emq_A Hypothetical conserved 99.1 1.6E-10 5.5E-15 98.7 8.5 101 256-378 16-118 (157)
110 2cu0_A Inosine-5'-monophosphat 99.1 5.8E-11 2E-15 121.1 6.0 111 158-313 96-206 (486)
111 1vr9_A CBS domain protein/ACT 99.1 9.4E-11 3.2E-15 106.4 6.6 92 256-378 18-109 (213)
112 4aef_A Neopullulanase (alpha-a 99.1 1.8E-10 6E-15 121.4 9.2 67 20-89 16-83 (645)
113 3ghd_A A cystathionine beta-sy 99.1 1.6E-10 5.5E-15 86.5 5.8 48 261-315 2-49 (70)
114 1jcn_A Inosine monophosphate d 99.1 3.9E-12 1.3E-16 130.7 -4.8 120 156-314 109-232 (514)
115 3kxr_A Magnesium transporter, 99.0 3E-10 1E-14 102.7 7.9 93 255-378 58-153 (205)
116 1yav_A Hypothetical protein BS 99.0 1.7E-10 5.6E-15 99.2 5.4 100 257-378 20-121 (159)
117 3ghd_A A cystathionine beta-sy 99.0 3.4E-10 1.2E-14 84.7 5.9 47 166-214 1-47 (70)
118 3org_A CMCLC; transporter, tra 99.0 2.9E-10 9.9E-15 119.5 5.0 117 256-378 458-605 (632)
119 2oux_A Magnesium transporter; 98.9 8.9E-10 3E-14 104.6 6.2 92 256-378 142-238 (286)
120 3pc3_A CG1753, isoform A; CBS, 98.9 1.6E-09 5.6E-14 111.4 8.5 98 255-378 388-486 (527)
121 2yvy_A MGTE, Mg2+ transporter 98.9 3E-09 1E-13 100.4 9.3 93 255-378 139-236 (278)
122 2zy9_A Mg2+ transporter MGTE; 98.7 2.4E-08 8.2E-13 101.4 8.3 93 255-378 159-256 (473)
123 3fio_A A cystathionine beta-sy 98.7 2.4E-08 8.3E-13 73.4 5.8 50 260-316 1-50 (70)
124 1zfj_A Inosine monophosphate d 98.7 7.2E-08 2.5E-12 98.2 10.5 96 256-379 95-191 (491)
125 3usb_A Inosine-5'-monophosphat 98.6 5.5E-08 1.9E-12 99.6 8.2 95 256-378 118-213 (511)
126 1me8_A Inosine-5'-monophosphat 98.6 6.5E-09 2.2E-13 106.3 0.0 96 257-378 103-200 (503)
127 4fxs_A Inosine-5'-monophosphat 98.5 4.1E-08 1.4E-12 100.2 3.7 93 256-378 94-188 (496)
128 1vrd_A Inosine-5'-monophosphat 98.5 1.4E-08 4.9E-13 103.5 0.0 93 256-378 100-194 (494)
129 2z0b_A GDE5, KIAA1434, putativ 98.5 2.7E-07 9.2E-12 77.4 7.4 61 16-76 4-75 (131)
130 4af0_A Inosine-5'-monophosphat 98.5 1.7E-08 5.9E-13 102.0 0.0 94 257-378 144-237 (556)
131 3fio_A A cystathionine beta-sy 98.5 3.9E-07 1.3E-11 66.8 7.1 48 166-215 1-48 (70)
132 4avf_A Inosine-5'-monophosphat 98.4 3.1E-08 1.1E-12 101.0 0.0 92 256-378 93-186 (490)
133 1jcn_A Inosine monophosphate d 98.3 2.9E-08 9.8E-13 101.8 -2.6 98 256-378 113-212 (514)
134 2cu0_A Inosine-5'-monophosphat 98.2 2.2E-07 7.4E-12 94.6 0.0 91 256-379 98-188 (486)
135 3c8d_A Enterochelin esterase; 98.0 2.1E-05 7.1E-10 77.9 9.6 87 20-109 30-155 (403)
136 1ac0_A Glucoamylase; hydrolase 97.9 6.9E-06 2.4E-10 66.3 4.1 60 18-77 4-74 (108)
137 1m7x_A 1,4-alpha-glucan branch 97.3 0.00072 2.5E-08 70.6 9.6 68 21-90 25-100 (617)
138 3aml_A OS06G0726400 protein; s 97.3 0.00035 1.2E-08 74.6 7.3 64 22-88 66-143 (755)
139 3k1d_A 1,4-alpha-glucan-branch 97.2 0.00053 1.8E-08 72.8 7.5 67 21-89 136-210 (722)
140 2laa_A Beta/alpha-amylase; SBD 96.3 0.012 4.1E-07 46.8 7.2 65 21-87 5-76 (104)
141 1qho_A Alpha-amylase; glycosid 96.0 0.018 6.3E-07 60.6 9.4 57 18-76 579-653 (686)
142 1wzl_A Alpha-amylase II; pullu 95.8 0.0083 2.8E-07 62.1 5.6 69 9-77 7-87 (585)
143 3vgf_A Malto-oligosyltrehalose 95.6 0.0074 2.5E-07 62.1 4.4 62 22-89 10-74 (558)
144 1cyg_A Cyclodextrin glucanotra 95.6 0.029 9.8E-07 59.1 8.7 59 18-76 577-647 (680)
145 1j0h_A Neopullulanase; beta-al 95.5 0.0094 3.2E-07 61.7 4.5 69 9-77 7-89 (588)
146 3bmv_A Cyclomaltodextrin gluca 95.3 0.029 9.8E-07 59.1 7.7 59 18-76 581-651 (683)
147 2vn4_A Glucoamylase; hydrolase 95.2 0.035 1.2E-06 57.6 7.6 58 19-76 495-563 (599)
148 1bf2_A Isoamylase; hydrolase, 95.1 0.013 4.5E-07 62.5 4.4 54 23-79 18-84 (750)
149 1d3c_A Cyclodextrin glycosyltr 95.1 0.038 1.3E-06 58.2 7.8 59 18-76 584-654 (686)
150 2bhu_A Maltooligosyltrehalose 95.1 0.019 6.4E-07 59.7 5.3 62 22-90 35-97 (602)
151 2wsk_A Glycogen debranching en 95.0 0.022 7.6E-07 59.7 5.7 54 22-79 20-77 (657)
152 2vr5_A Glycogen operon protein 94.9 0.063 2.2E-06 56.9 8.8 55 22-80 30-91 (718)
153 1vem_A Beta-amylase; beta-alph 94.6 0.05 1.7E-06 55.4 6.7 59 17-76 416-485 (516)
154 1ea9_C Cyclomaltodextrinase; h 93.9 0.019 6.6E-07 59.3 2.0 69 9-77 7-86 (583)
155 2e8y_A AMYX protein, pullulana 93.7 0.068 2.3E-06 56.6 6.0 64 22-88 114-184 (718)
156 2fhf_A Pullulanase; multiple d 93.0 0.096 3.3E-06 57.9 5.8 67 22-90 305-385 (1083)
157 3m07_A Putative alpha amylase; 92.2 0.16 5.3E-06 52.9 5.9 61 23-90 44-107 (618)
158 3faw_A Reticulocyte binding pr 91.6 0.099 3.4E-06 56.6 3.6 65 23-89 146-224 (877)
159 2ya0_A Putative alkaline amylo 91.4 0.23 7.9E-06 52.5 6.2 65 23-89 26-106 (714)
160 1gcy_A Glucan 1,4-alpha-maltot 91.2 0.039 1.3E-06 56.2 0.0 57 19-76 429-495 (527)
161 4aio_A Limit dextrinase; hydro 90.9 0.16 5.4E-06 54.6 4.4 54 22-78 137-194 (884)
162 2wan_A Pullulanase; hydrolase, 90.0 0.22 7.7E-06 54.2 4.6 63 22-88 326-398 (921)
163 2wan_A Pullulanase; hydrolase, 89.1 0.55 1.9E-05 51.1 6.9 59 21-81 153-221 (921)
164 4fch_A Outer membrane protein 88.1 0.34 1.2E-05 43.4 3.8 50 30-80 11-62 (221)
165 1ji1_A Alpha-amylase I; beta/a 86.7 0.5 1.7E-05 49.1 4.5 58 21-78 30-96 (637)
166 2ya1_A Putative alkaline amylo 86.6 0.54 1.9E-05 51.7 4.9 63 23-87 333-411 (1014)
167 2c3v_A Alpha-amylase G-6; carb 79.2 3 0.0001 32.7 5.1 64 21-86 10-80 (102)
168 4fe9_A Outer membrane protein 64.8 5.1 0.00018 39.7 4.3 45 32-77 151-197 (470)
169 2djm_A Glucoamylase A; beta sa 60.5 16 0.00055 28.6 5.6 54 31-84 33-96 (106)
170 2eef_A Protein phosphatase 1, 58.5 8.5 0.00029 32.5 3.8 63 21-83 48-126 (156)
171 2jnz_A PHL P 3 allergen; timot 52.1 28 0.00097 27.3 5.7 62 16-83 23-90 (108)
172 4fem_A Outer membrane protein 44.7 18 0.00063 34.3 4.3 50 31-81 149-200 (358)
173 4dny_A Metalloprotease STCE; m 44.1 23 0.00078 28.7 4.0 23 63-86 100-123 (126)
174 4fch_A Outer membrane protein 43.8 11 0.00038 33.3 2.4 49 32-80 117-169 (221)
175 4fe9_A Outer membrane protein 41.8 24 0.00084 34.7 4.8 53 31-84 260-319 (470)
176 4a02_A EFCBM33A, CBM33, chitin 35.3 98 0.0034 26.1 6.9 72 21-102 74-163 (166)
177 2bem_A CBP21; chitin-binding p 33.7 1.2E+02 0.0041 25.7 7.2 71 22-102 76-166 (170)
178 2fqm_A Phosphoprotein, P prote 30.9 20 0.00068 25.7 1.5 27 38-68 1-27 (75)
179 1ew4_A CYAY protein; friedreic 27.4 37 0.0013 26.5 2.6 17 68-86 68-84 (106)
180 3ft1_A PHL P 3 allergen; beta- 27.2 1.6E+02 0.0053 22.6 6.2 60 18-83 14-79 (100)
181 2fwh_A Thiol:disulfide interch 25.9 85 0.0029 24.3 4.8 53 165-218 66-127 (134)
182 1mhx_A Immunoglobulin-binding 24.3 27 0.00091 24.0 1.1 13 76-88 48-60 (65)
183 2aan_A Auracyanin A; cupredoxi 23.8 93 0.0032 24.7 4.7 18 21-38 43-64 (139)
184 4aef_A Neopullulanase (alpha-a 22.1 89 0.003 32.0 5.2 51 20-76 124-178 (645)
185 4aee_A Alpha amylase, catalyti 20.6 71 0.0024 33.1 4.1 55 20-77 133-187 (696)
186 1qhq_A Protein (auracyanin); e 20.2 83 0.0029 25.0 3.6 17 21-37 41-62 (140)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.95 E-value=1.9e-27 Score=229.24 Aligned_cols=210 Identities=23% Similarity=0.366 Sum_probs=164.9
Q ss_pred HHHHHHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCC
Q 016691 143 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 222 (384)
Q Consensus 143 ~~~~~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~ 222 (384)
...+++.+||+.++|||+||.+.++++++.++|+.+|+++|.+++++++||||++.++++|+||.+|++..+.+......
T Consensus 18 ~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~ 97 (323)
T 3t4n_C 18 LAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPD 97 (323)
T ss_dssp HHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcc
Confidence 56788999999999999999999999999999999999999999999999999766799999999999998765543321
Q ss_pred CCChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEE
Q 016691 223 NLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (384)
Q Consensus 223 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvG 302 (384)
. .+.++.+....+++.+.... .|+++++++.+++++.+|+..|.+++++++||+|++...+ .++++|
T Consensus 98 ~--~~~l~~~~~~~v~~i~~~~~----------~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~-~~~l~G 164 (323)
T 3t4n_C 98 K--FELVDKLQLDGLKDIERALG----------VDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH-REIVVS 164 (323)
T ss_dssp G--GGGGGGCBHHHHHHHHHHTT----------C----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-CEEEEE
T ss_pred h--hHHHHHHHHHHHHHHHHHhC----------CCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-ccceEE
Confidence 1 13344444445555543322 4789999999999999999999999999999998511111 012999
Q ss_pred EeeHHHHHHHHHhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 303 LASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 303 iit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++|++|+++++..+... ..+.++++.++.++ |.++++++.+++++.+|+++|.+++++++||+
T Consensus 165 ivt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVv 227 (323)
T 3t4n_C 165 VLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPII 227 (323)
T ss_dssp EEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred EecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 99999999999876543 23445555555433 34689999999999999999999999999997
No 2
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.91 E-value=2.8e-24 Score=207.83 Aligned_cols=208 Identities=30% Similarity=0.526 Sum_probs=164.1
Q ss_pred HHHHHHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCC
Q 016691 143 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 222 (384)
Q Consensus 143 ~~~~~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~ 222 (384)
.+.+.++.+|+..+|+|+|+.+.+++++++++|+.+|+++|.+++++++||+|++.++++|+||.+|++..+.......
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~- 101 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSA- 101 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHH-
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhcc-
Confidence 4455799999999999999988999999999999999999999999999999975579999999999998765432110
Q ss_pred CCChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEE
Q 016691 223 NLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (384)
Q Consensus 223 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvG 302 (384)
.....++....+..+.+... .+|.++++++.+++++.+|+++|.+++++++||+|. ++| +++|
T Consensus 102 ~~~~~~l~~~~~~~~~~~~~------------~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~---~~~G 164 (330)
T 2v8q_E 102 LVQIYELEEHKIETWREVYL------------QDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP--ESG---NTLY 164 (330)
T ss_dssp TTTCCCGGGCBHHHHHHHHS------------SSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT--TTC---CEEE
T ss_pred ccchhHHhhccHHHHHHHHh------------hcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC--CCC---cEEE
Confidence 00012333444444443321 157899999999999999999999999999999972 146 8999
Q ss_pred EeeHHHHHHHHHhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 303 LASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 303 iit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+||.+|+++++..+....+ ...++.+++.++.++++ ++++++.+++++.+|+++|.+++++++||+
T Consensus 165 ivt~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v~~~---------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv 230 (330)
T 2v8q_E 165 ILTHKRILKFLKLFITEFP-KPEFMSKSLEELQIGTY---------ANIAMVRTTTPVYVALGIFVQHRVSALPVV 230 (330)
T ss_dssp EECHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTCSBC---------SSCCCEETTCBHHHHHHHHHHHCCSEEEEE
T ss_pred EEcHHHHHHHHHHHhhccC-chhhhcCCHHHhcccCc---------CCceEECCCCCHHHHHHHHHHcCCCeEEEE
Confidence 9999999999987643321 12345566666654442 478999999999999999999999999997
No 3
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.91 E-value=6.7e-23 Score=198.29 Aligned_cols=208 Identities=20% Similarity=0.344 Sum_probs=161.2
Q ss_pred HHHHHHHHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccC
Q 016691 141 LQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTN 220 (384)
Q Consensus 141 ~e~~~~~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~ 220 (384)
.......+.+||.+.+|+|+|+.+.+++++++++|+.+|+++|.+++++++||+|++.++++|+||.+|++..+......
T Consensus 8 ~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~ 87 (334)
T 2qrd_G 8 QKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQS 87 (334)
T ss_dssp HHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhc
Confidence 34567888999999999999999889999999999999999999999999999997558999999999999877543221
Q ss_pred CCCC-ChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCc--eEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCc
Q 016691 221 GSNL-TEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPL--VQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSC 297 (384)
Q Consensus 221 ~~~~-~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~--itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~ 297 (384)
.... ..+.++...+..+++....+ |.+++ +++.+++++.+|+++|.+++++++||+|+ .++
T Consensus 88 ~~~~~~~~~~~~~~~~~i~~~l~~i------------m~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~-- 151 (334)
T 2qrd_G 88 SSFPEAIAEIDKFRLLGLREVERKI------------GAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV--DGE-- 151 (334)
T ss_dssp CSCGGGGGGGGSCBHHHHHHHHHHH------------TCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE--ETT--
T ss_pred cCCccHHHHHhhhchhhHHHHHHhh------------ccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC--CCC--
Confidence 0000 01223344555565554332 45556 99999999999999999999999999984 222
Q ss_pred cc----EEEEeeHHHHHHHHHhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCc
Q 016691 298 QE----ILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLT 373 (384)
Q Consensus 298 ~~----lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is 373 (384)
+ ++|+||++|+++++..+... ..+...++.++. ..|.++++++++++++.+|+++|.+++++
T Consensus 152 -~~~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l~---------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~ 217 (334)
T 2qrd_G 152 -TGSEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQMT---------IGTWSNLATASMETKVYDVIKMLAEKNIS 217 (334)
T ss_dssp -TTEEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGSS---------CSBCSSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred -cCccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHhC---------CcccCCceEECCCCcHHHHHHHHHHcCCc
Confidence 3 99999999999998865322 112333443321 12457899999999999999999999999
Q ss_pred eeeec
Q 016691 374 LFQQP 378 (384)
Q Consensus 374 ~lPV~ 378 (384)
++||+
T Consensus 218 ~~~Vv 222 (334)
T 2qrd_G 218 AVPIV 222 (334)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 4
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.90 E-value=1.8e-23 Score=167.39 Aligned_cols=86 Identities=43% Similarity=0.835 Sum_probs=77.1
Q ss_pred CCCceeEEEEEeeCCCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEeecCCCCCeeeCCCCC
Q 016691 16 VGSILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVSGNYGV 95 (384)
Q Consensus 16 ~~~~~~~v~f~w~~~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~~d~~~p~~~d~~G~ 95 (384)
..+.+++++|+|..+|++|+|+|+||+|+ .++|.++ .|.|++++.|++|.|+|||+|||+|++||.+|++.|+.|+
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~---~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS---QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE---TTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC---CCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 34567999999999999999999999999 7899984 4799999999999999999999999999999999999999
Q ss_pred eeeEEEeccCC
Q 016691 96 VNCVYIAVPQP 106 (384)
Q Consensus 96 ~nNvi~v~~~~ 106 (384)
.||+|.| ..+
T Consensus 82 ~Nnvi~V-~~~ 91 (96)
T 1z0n_A 82 VNNIIQV-KKT 91 (96)
T ss_dssp EEEEEEE-CSC
T ss_pred EeEEEEE-cCC
Confidence 9999999 543
No 5
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.88 E-value=6.1e-23 Score=191.42 Aligned_cols=88 Identities=32% Similarity=0.663 Sum_probs=80.4
Q ss_pred ceeEEEEEeeCCCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEeecCCCCCeeeCCCCCeee
Q 016691 19 ILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVSGNYGVVNC 98 (384)
Q Consensus 19 ~~~~v~f~w~~~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~~d~~~p~~~d~~G~~nN 98 (384)
.++|++|+|+++|++|+|+|||++|++.++|.|.+..+|.|++++.||||.|+|||+|||+|++|+++|++.|+.|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 46899999999999999999999999888999854457899999999999999999999999999999999999999999
Q ss_pred EEEeccCCC
Q 016691 99 VYIAVPQPD 107 (384)
Q Consensus 99 vi~v~~~~~ 107 (384)
+|+| .+++
T Consensus 82 vi~V-~~~~ 89 (252)
T 2qlv_B 82 YIEV-RQPE 89 (252)
T ss_dssp EEEE-CC--
T ss_pred eeec-cCcc
Confidence 9999 6543
No 6
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.87 E-value=2.3e-22 Score=192.69 Aligned_cols=121 Identities=23% Similarity=0.416 Sum_probs=95.6
Q ss_pred CceeEEEEEeeC-CCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEeecCCCCCee-eCCCCC
Q 016691 18 SILVPVRFIWPN-GGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHV-SGNYGV 95 (384)
Q Consensus 18 ~~~~~v~f~w~~-~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~~d~~~p~~-~d~~G~ 95 (384)
....+++|+|++ +|++|+|+||||||+..++|++++ .+|.|++++.||||+|+|||+|||+|++|+++|.. .|+.|+
T Consensus 167 ~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~-~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~ 245 (294)
T 3nme_A 167 LKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGK-GTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGH 245 (294)
T ss_dssp CCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECT-TTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSC
T ss_pred cccccceeeeccCCCCEEEEEEeccCCCCcccceEcC-CCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCC
Confidence 457899999999 789999999999999779999964 37999999999999999999999999999999976 799999
Q ss_pred eeeEEEeccCCCCCCCCCCCCCCCCccccccccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 016691 96 VNCVYIAVPQPDMVPNTISPETSGNMEVDDVVMRPEGFAQYSEADLQLSRDRISSFLSTH 155 (384)
Q Consensus 96 ~nNvi~v~~~~~~~p~~~~~~~~~~~dl~~~~~~~~~~~~~s~~~~e~~~~~~~~~l~~~ 155 (384)
.||+|.| .+ +..++ ...+++.+.. +-|+. .+.++..++.+|...
T Consensus 246 ~nn~~~v-~~-~~~~~--------~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~ 289 (294)
T 3nme_A 246 TNNYAKV-VD-DPTSV--------DGTTRERLSS--EDPEL----LEEERSKLIQFLETC 289 (294)
T ss_dssp CEEEEEE-CC-CCCTT--------CTTHHHHHSS--SSCCC----CHHHHHHHHHHHHHH
T ss_pred EeEEEEE-CC-CCcch--------hHHHHHHhhc--CCccc----cHHHHHHHHHHHHhc
Confidence 9999999 54 32222 3444433432 22332 255677788877653
No 7
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.86 E-value=1.6e-22 Score=177.65 Aligned_cols=157 Identities=17% Similarity=0.260 Sum_probs=116.6
Q ss_pred HHHHHHHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCC
Q 016691 142 QLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNG 221 (384)
Q Consensus 142 e~~~~~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~ 221 (384)
++.++++.+.|++.+|.|+| +.+++++.+++|+.+|+++|.+++++++||+|+ +|+++|+||.+|+++.+.....
T Consensus 5 ~~~~~~~~~~l~~~~V~diM--~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~-- 79 (170)
T 4esy_A 5 QARRRAIARAIRQVPIRDIL--TSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWI-- 79 (170)
T ss_dssp HHHHHHHHHHHHTSBGGGGC--CSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTH--
T ss_pred HHHHHHHHHHHcCCCHHHhc--CCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhccc--
Confidence 46688899999999999999 668999999999999999999999999999995 7899999999999754321000
Q ss_pred CCCChhh-hhhh-hHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCccc
Q 016691 222 SNLTEEE-LETH-TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQE 299 (384)
Q Consensus 222 ~~~~~~~-l~~~-~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~ 299 (384)
....+ +... ............. . .....+|++++++++++++|.+|+.+|.+++++++||+|+ | +
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~--~--~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~----g---~ 146 (170)
T 4esy_A 80 --YEASEILSRAIPAPEVEHLFETGR--K--LTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD----G---V 146 (170)
T ss_dssp --HHHHHHHTTTSCHHHHHHHHHHHT--T--CBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET----T---E
T ss_pred --cchhhhhhhccchhhHHhhhcccc--c--cchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC----C---E
Confidence 00000 0000 0000011110000 0 0001258999999999999999999999999999999982 6 8
Q ss_pred EEEEeeHHHHHHHHHhh
Q 016691 300 ILYLASLSDILKCICRH 316 (384)
Q Consensus 300 lvGiit~~dil~~l~~~ 316 (384)
++||||.+||+++|..+
T Consensus 147 lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 147 PVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp EEEEEEHHHHTTTSCCC
T ss_pred EEEEEEHHHHHHHHHhc
Confidence 99999999999998643
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.85 E-value=8.4e-21 Score=178.12 Aligned_cols=182 Identities=11% Similarity=0.216 Sum_probs=136.4
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
++.++|+.. +++++++++|+.+|+++|.+++++++||+|++.++++|++|..|++..+...... ..+......
T Consensus 4 ~v~~~i~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~------~~~~~~~~~ 76 (280)
T 3kh5_A 4 RVMKIAQNK-KIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKY------NLIREKHER 76 (280)
T ss_dssp BGGGTSCCS-CCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGG------HHHHTTSTT
T ss_pred hHHHHhcCC-CcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchh------hhhhhcccc
Confidence 456665544 8999999999999999999999999999996468999999999998765321110 000000000
Q ss_pred HHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHh
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~ 315 (384)
.+.... . .....+|+++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|.+|+++++..
T Consensus 77 ~~~~~~---~-----~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 77 NFLAAI---N-----EPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLD 142 (280)
T ss_dssp CHHHHT---T-----SBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGG
T ss_pred chhHHh---h-----hhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhh
Confidence 000000 0 0011258889999999999999999999999999999983 36 89999999999998865
Q ss_pred hcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 316 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.... . ..+++ +|.++++++.+++++.+|++.|.+++++++||+
T Consensus 143 ~~~~--------~-----~~v~~-------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv 185 (280)
T 3kh5_A 143 KIDE--------N-----EVIDD-------YITRDVIVATPGERLKDVARTMVRNGFRRLPVV 185 (280)
T ss_dssp GSCT--------T-----CBSGG-------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE
T ss_pred cCCC--------C-----CCHHH-------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 4321 1 12233 345789999999999999999999999999997
No 9
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.82 E-value=4.1e-20 Score=175.66 Aligned_cols=173 Identities=12% Similarity=0.170 Sum_probs=138.8
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
..++.++| ..+++++.+++++.+|+++|.+++++.+||+|+ .++++|++|..|++..+...... . +
T Consensus 92 ~~~v~~im--~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~lvGivt~~dl~~~~~~~~~~---~--------~ 157 (296)
T 3ddj_A 92 TTPIIDYM--TPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI-NDKPVGIVTEREFLLLYKDLDEI---F--------P 157 (296)
T ss_dssp TSBGGGTS--EESCCCEETTSCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHGGGGGGSCCC---C--------B
T ss_pred cccHHHhc--cCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHhhhccccc---c--------c
Confidence 67899999 457889999999999999999999999999985 68999999999997654321110 0 1
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
..+ +|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++
T Consensus 158 ---v~~----------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~ 212 (296)
T 3ddj_A 158 ---VKV----------------FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD---DN---KVVGIVTVVNAIKQL 212 (296)
T ss_dssp ---HHH----------------HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHH
T ss_pred ---HHH----------------hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHH
Confidence 122 26788999999999999999999999999999983 36 899999999999999
Q ss_pred HhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
...+..... ....+ .++ .++|+++++++.+++++.+|+++|.+++++++||+
T Consensus 213 ~~~~~~~~~-~~~~~-----~~v-------~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv 264 (296)
T 3ddj_A 213 AKAVDKLDP-DYFYG-----KVV-------KDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLIL 264 (296)
T ss_dssp HHHHHHTCT-HHHHT-----CBH-------HHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHhhcCh-hhhcC-----cCH-------HHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 865543211 00111 222 33456799999999999999999999999999997
No 10
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.81 E-value=1.2e-19 Score=170.32 Aligned_cols=176 Identities=17% Similarity=0.327 Sum_probs=137.1
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
..++.++| ..+++++.+++++.+|++.|.+++++.+||+|+ .++++|++|..|+++.+........ +
T Consensus 83 ~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~----------~ 149 (280)
T 3kh5_A 83 NEPVREIM--EENVITLKENADIDEAIETFLTKNVGGAPIVND-ENQLISLITERDVIRALLDKIDENE----------V 149 (280)
T ss_dssp TSBGGGTS--BCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHGGGSCTTC----------B
T ss_pred hhhHHHhc--CCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC-CCEEEEEEEHHHHHHHHhhcCCCCC----------C
Confidence 56899999 457889999999999999999999999999995 6899999999999876643211100 0
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
+ . .+|+++++++.+++++.+|+..|.+++++++||++ +| +++|+||.+|+++++
T Consensus 150 v---~----------------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~----~~---~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 150 I---D----------------DYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS----EG---RLVGIITSTDFIKLL 203 (280)
T ss_dssp S---G----------------GGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHH
T ss_pred H---H----------------HHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHHHHH
Confidence 0 0 14678899999999999999999999999999996 26 899999999999998
Q ss_pred Hhhcc--cCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 314 CRHFK--HSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 314 ~~~~~--~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
..... .... ... ....+.+ ++++|+++++++++++++.+|+++|.+++++++||+
T Consensus 204 ~~~~~~~~~~~-~~~--~~~~~~~-------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv 260 (280)
T 3kh5_A 204 GSDWAFNHMQT-GNV--REITNVR-------MEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVV 260 (280)
T ss_dssp TSHHHHHHHHS-CCT--HHHHHCB-------HHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhhhhhhcc-cch--hhhhCCc-------HHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEE
Confidence 64321 0000 000 0001122 234456799999999999999999999999999997
No 11
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.81 E-value=2.8e-20 Score=176.87 Aligned_cols=176 Identities=9% Similarity=0.054 Sum_probs=136.2
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
..++.|+| +.+++++++++|+.+|+++|.+++++++||+| ++++|++|.+|++..+...... .+ .
T Consensus 19 ~~~V~dim--~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~------~~----~ 83 (296)
T 3ddj_A 19 GMNIETLM--IKNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD------SC----S 83 (296)
T ss_dssp CSSGGGTC--EESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---------C----C
T ss_pred ccCHHHhc--cCCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccc------cc----c
Confidence 57899999 55899999999999999999999999999998 7999999999998765321110 00 0
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
...+.+.. .. . ...+|+++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|.+|+++++
T Consensus 84 ~~~~~~~~-~~---~----v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~~ 149 (296)
T 3ddj_A 84 QGDLYHIS-TT---P----IIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLLY 149 (296)
T ss_dssp HHHHHHHH-TS---B----GGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGGG
T ss_pred chhhHHHh-cc---c----HHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHhh
Confidence 01111111 00 0 11257889999999999999999999999999999983 36 899999999999876
Q ss_pred HhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeecc
Q 016691 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQPA 379 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~~ 379 (384)
..... . ..++++ |.++++++.+++++.+|+++|.+++++++||+-
T Consensus 150 ~~~~~---------~-----~~v~~~-------m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 194 (296)
T 3ddj_A 150 KDLDE---------I-----FPVKVF-------MSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID 194 (296)
T ss_dssp GGSCC---------C-----CBHHHH-------SBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hcccc---------c-----ccHHHh-------hcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 43221 1 123333 457899999999999999999999999999973
No 12
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.78 E-value=1.3e-18 Score=167.41 Aligned_cols=179 Identities=15% Similarity=0.117 Sum_probs=131.2
Q ss_pred ccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCe-----EEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 157 VYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGR-----FVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 157 ~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~-----~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
+.++| +..++++.+++++.+|++.|.+++++.+||+|+ .+. ++|++|..|++..+...... ..+..
T Consensus 116 ~~~~~--~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~~~~~~l~Givt~~di~~~l~~~~~~------~~~~~ 186 (323)
T 3t4n_C 116 ALGVD--QLDTASIHPSRPLFEACLKMLESRSGRIPLIDQ-DEETHREIVVSVLTQYRILKFVALNCRE------THFLK 186 (323)
T ss_dssp HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CTTTCCEEEEEEEEHHHHHHHHHHHCGG------GGGCC
T ss_pred HhCCC--CCCceEeCCCCcHHHHHHHHHhCCeeEEEEEec-CCCCCccceEEEecHHHHHHHHHhcCCc------hhhhh
Confidence 55667 557889999999999999999999999999996 343 99999999999877533211 00000
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
.++ .+. . ..|+++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.+|+++
T Consensus 187 ~~v---~~~----~---------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~---~~---~~~Giit~~dl~~ 244 (323)
T 3t4n_C 187 IPI---GDL----N---------IITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLG 244 (323)
T ss_dssp SBG---GGT----T---------CSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEETTHHHH
T ss_pred CcH---HHc----C---------CCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECC---CC---eEEEEEeHHHHHH
Confidence 011 000 0 127889999999999999999999999999999983 46 8999999999999
Q ss_pred HHHhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 312 CICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++...... .++.++ +++|.+. ....++++++++++++.+|+++|.+++++++||+
T Consensus 245 ~~~~~~~~------~~~~~v-----~~~m~~~-~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv 299 (323)
T 3t4n_C 245 LIKGGIYN------DLSLSV-----GEALMRR-SDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVV 299 (323)
T ss_dssp HHHTTHHH------HTTSBH-----HHHGGGS-CTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEE
T ss_pred HHhhchhh------hccCCH-----HHHHhhc-cccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEE
Confidence 98754311 122233 3333200 0001279999999999999999999999999997
No 13
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.78 E-value=1.2e-18 Score=145.76 Aligned_cols=127 Identities=13% Similarity=0.230 Sum_probs=103.2
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|...++.|+|....+++++++++++.+|++.|.+++++.+||+|++.++++|+||.+|++..+..... .
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~---~-------- 71 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSG---Q-------- 71 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTT---T--------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCC---c--------
Confidence 67789999997667888999999999999999999999999999633899999999999877643210 0
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
.+ +.+ +| ++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+||++
T Consensus 72 ~~---v~~----------------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~g---~~vGivt~~dil~ 125 (130)
T 3i8n_A 72 KQ---LGA----------------VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDE---YG---TVLGLVTLEDIFE 125 (130)
T ss_dssp SB---HHH----------------HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHH
T ss_pred CC---HHH----------------Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC---CC---CEEEEEEHHHHHH
Confidence 01 122 25 45789999999999999999999999999983 46 8999999999999
Q ss_pred HHHh
Q 016691 312 CICR 315 (384)
Q Consensus 312 ~l~~ 315 (384)
++..
T Consensus 126 ~l~g 129 (130)
T 3i8n_A 126 HLVG 129 (130)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 9863
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.77 E-value=2.2e-18 Score=149.76 Aligned_cols=138 Identities=18% Similarity=0.250 Sum_probs=108.6
Q ss_pred HHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChh
Q 016691 148 ISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEE 227 (384)
Q Consensus 148 ~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~ 227 (384)
+.+||. .++.++|....+++++.+++|+.+|+++|.+++++++||+|+ .++++|+||.+|+++++...... .+
T Consensus 9 ~e~~l~-~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-~~~lvGiit~~Di~~~~~~~~~~-----~~ 81 (156)
T 3k6e_A 9 FETFLL-GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLS-----QE 81 (156)
T ss_dssp HHHHHH-TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC-----HH
T ss_pred HHHHhh-ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEecchhhhhhhcccc-----cc
Confidence 334443 568899977779999999999999999999999999999995 68999999999998876543211 11
Q ss_pred hhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHH
Q 016691 228 ELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLS 307 (384)
Q Consensus 228 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~ 307 (384)
.+...++ ..+|+++++++++++++.+|+.+|.++++ +||+|+ +| +++||||.+
T Consensus 82 ~~~~~~v-------------------~~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~---~g---~l~GiiT~~ 134 (156)
T 3k6e_A 82 IMADTDI-------------------VHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDA---EG---IFQGIITRK 134 (156)
T ss_dssp HHTTSBG-------------------GGTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECT---TS---BEEEEEEHH
T ss_pred cccccCH-------------------HHhhcCCceecccccHHHHHHHHHHHcCC--eEEEec---CC---EEEEEEEHH
Confidence 1111100 12588999999999999999999998864 999983 47 899999999
Q ss_pred HHHHHHHhhccc
Q 016691 308 DILKCICRHFKH 319 (384)
Q Consensus 308 dil~~l~~~~~~ 319 (384)
||++++.....+
T Consensus 135 Dil~~~~~~~~~ 146 (156)
T 3k6e_A 135 SILKAVNALLHD 146 (156)
T ss_dssp HHHHHHHHHSCC
T ss_pred HHHHHHHHHhcc
Confidence 999999876543
No 15
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.77 E-value=1.7e-18 Score=162.87 Aligned_cols=184 Identities=15% Similarity=0.155 Sum_probs=128.4
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHH-HHHHhccCCCCCChhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFIL-ILRELGTNGSNLTEEELETH 232 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~-~l~~~~~~~~~~~~~~l~~~ 232 (384)
..++.++| ...++++.+++++.+|++.|.++++..+||+|+ .++++|++|..|+++ .+... . .....
T Consensus 59 ~~~v~~~m--~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~di~~~~~~~~--~-------~~~~~ 126 (282)
T 2yzq_A 59 EEQLAMLV--KRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS-KGKPVGILTVGDIIRRYFAKS--E-------KYKGV 126 (282)
T ss_dssp -----CCC--BSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTTTC--S-------GGGGC
T ss_pred cCCHHHHc--CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHhcc--C-------CcccC
Confidence 35688888 446789999999999999999999999999995 589999999999976 43210 0 00000
Q ss_pred hHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH--
Q 016691 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL-- 310 (384)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil-- 310 (384)
+ ...+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|+||.+|++
T Consensus 127 ~-------------------v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~~---~~~Giit~~dl~~~ 181 (282)
T 2yzq_A 127 E-------------------IEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDS---EG---NLVGIVDETDLLRD 181 (282)
T ss_dssp B-------------------STTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECT---TS---CEEEEEEGGGGGGC
T ss_pred c-------------------HHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcC---CC---eEEEEEEHHHHhhh
Confidence 0 01247788999999999999999999999999999973 36 899999999999
Q ss_pred ----HHHHhhc---cc-C-----CCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeee
Q 016691 311 ----KCICRHF---KH-S-----SSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQ 377 (384)
Q Consensus 311 ----~~l~~~~---~~-~-----~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV 377 (384)
+++..+. .. . ......+..... ......++++|+++++++++++++.+|+++|.+++++++||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpV 257 (282)
T 2yzq_A 182 SEIVRIMKSTELAASSEEEWILESHPTLLFEKFEL----QLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPV 257 (282)
T ss_dssp GGGCC------------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEE
T ss_pred hhhhhhhccchhhhhhhhhhhcccchHHHHhHhhh----hhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEE
Confidence 5543100 00 0 000000000000 00011345566789999999999999999999999999999
Q ss_pred c
Q 016691 378 P 378 (384)
Q Consensus 378 ~ 378 (384)
+
T Consensus 258 v 258 (282)
T 2yzq_A 258 I 258 (282)
T ss_dssp E
T ss_pred E
Confidence 7
No 16
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.76 E-value=5.3e-18 Score=144.90 Aligned_cols=127 Identities=13% Similarity=0.198 Sum_probs=107.0
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|...++.|+|....+++++++++++.+|+++|.+++++.+||+|.+.++++|+||..|++..+.... . ..+
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-~-~~v------- 90 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-K-IEL------- 90 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-C-CCG-------
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-C-ccH-------
Confidence 5688999999544488999999999999999999999999999953379999999999987664321 0 000
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
. .+| ++++++.+++++.+|+.+|.+++++++||+|+ +| +++||||..||++
T Consensus 91 ------~----------------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~---~g---~~~Giit~~dil~ 141 (148)
T 3lv9_A 91 ------E----------------EIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE---YG---GTSGVVTIEDILE 141 (148)
T ss_dssp ------G----------------GTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---SEEEEEEHHHHHH
T ss_pred ------H----------------Hhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC---CC---CEEEEEEHHHHHH
Confidence 0 147 78899999999999999999999999999983 46 8999999999999
Q ss_pred HHHhh
Q 016691 312 CICRH 316 (384)
Q Consensus 312 ~l~~~ 316 (384)
++...
T Consensus 142 ~l~~~ 146 (148)
T 3lv9_A 142 EIVGE 146 (148)
T ss_dssp HHHHT
T ss_pred HHhCc
Confidence 98764
No 17
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=3.1e-18 Score=143.66 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=103.1
Q ss_pred ccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhH
Q 016691 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (384)
Q Consensus 155 ~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (384)
.++.|+|....+++++++++++.+|++.|.+++++++||+|.+.++++|+||.+|+++++... .... .
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----~~~~-----~--- 69 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----KEFT-----K--- 69 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS----SCCC-----H---
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc----Cccc-----h---
Confidence 578899965567899999999999999999999999999975458999999999998765421 1110 0
Q ss_pred HHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHH
Q 016691 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (384)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~ 314 (384)
..+.+ +| ++++++.+++++.+|+++|.+++++++||+|+ +| +++||||.+||++++.
T Consensus 70 ~~v~~----------------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~g---~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 70 EIMLR----------------AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE---YG---DIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHH----------------HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECT---TS---CEEEEEEHHHHHHHHH
T ss_pred hhHHH----------------hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC---CC---CEEEEeeHHHHHHHHh
Confidence 01122 25 56789999999999999999999999999983 46 8999999999999987
Q ss_pred hh
Q 016691 315 RH 316 (384)
Q Consensus 315 ~~ 316 (384)
..
T Consensus 127 g~ 128 (130)
T 3hf7_A 127 GD 128 (130)
T ss_dssp C-
T ss_pred CC
Confidence 53
No 18
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.76 E-value=9.2e-19 Score=164.68 Aligned_cols=161 Identities=15% Similarity=0.222 Sum_probs=116.4
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
++.++| ..+++++++++|+.+|+++|.++++.++||+|+ .++++|++|..|++..+..
T Consensus 2 ~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~~------------------- 59 (282)
T 2yzq_A 2 RVKTIM--TQNPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPDE------------------- 59 (282)
T ss_dssp BHHHHS--EESCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC-------------------------
T ss_pred chHHhc--cCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhcc-------------------
Confidence 577888 467889999999999999999999999999995 6899999999998743210
Q ss_pred HHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH-HHH
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CIC 314 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~-~l~ 314 (384)
..+ ..+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|++|.+|+++ ++.
T Consensus 60 --~~v-------------~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 60 --EQL-------------AMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFA 118 (282)
T ss_dssp -------------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTT
T ss_pred --CCH-------------HHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHh
Confidence 000 0146677899999999999999999999999999984 36 8999999999998 664
Q ss_pred hhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 315 RHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
... ...+ ..++ ++|.++++++.+++++.+|++.|.+++++++||+
T Consensus 119 ~~~-------~~~~-----~~v~-------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv 163 (282)
T 2yzq_A 119 KSE-------KYKG-----VEIE-------PYYQRYVSIVWEGTPLKAALKALLLSNSMALPVV 163 (282)
T ss_dssp TCS-------GGGG-----CBST-------TTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEE
T ss_pred ccC-------Cccc-----CcHH-------HHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 320 0111 1223 3345788999999999999999999999999997
No 19
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.75 E-value=5.2e-18 Score=163.72 Aligned_cols=182 Identities=12% Similarity=0.095 Sum_probs=136.1
Q ss_pred ccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHHH
Q 016691 157 VYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISA 236 (384)
Q Consensus 157 ~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~ 236 (384)
+.++| ..+++++.+++++.+|++.|.+++++.+||+|++.|+++|+||..|+++.+...... ... .++...++
T Consensus 120 ~~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~-~~~--~~~~~~~v-- 192 (330)
T 2v8q_E 120 YLQDS--FKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITE-FPK--PEFMSKSL-- 192 (330)
T ss_dssp HSSSS--CCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCS-SSC--CGGGGSBH--
T ss_pred Hhhcc--cCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhc-cCc--hhhhcCCH--
Confidence 44677 557889999999999999999999999999995358999999999999877543221 111 11111111
Q ss_pred HHHHHHhhccccccCCCCCCCC-CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHh
Q 016691 237 WKVGKLQLNLKRQMDGNGRPCP-RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~m~-~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~ 315 (384)
.+. . +|. ++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++..
T Consensus 193 -~~~----~----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~~---~l~Giit~~dl~~~~~~ 251 (330)
T 2v8q_E 193 -EEL----Q----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAE 251 (330)
T ss_dssp -HHH----T----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEGGGTGGGGGS
T ss_pred -HHh----c----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECC---CC---cEEEEEEHHHHHHHHhc
Confidence 111 1 244 78899999999999999999999999999983 36 89999999999987653
Q ss_pred hcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 316 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
... ..++.++. +++. ....|+++++++.+++++.+|+++|.+++++++||+
T Consensus 252 ~~~------~~~~~~v~-----~~~~-~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv 302 (330)
T 2v8q_E 252 KTY------NNLDVSVT-----KALQ-HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVV 302 (330)
T ss_dssp SCC------CCCSSBHH-----HHGG-GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ccc------ccccCcHH-----HHHh-ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEE
Confidence 210 11122333 3321 112346799999999999999999999999999997
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.74 E-value=1.1e-17 Score=147.07 Aligned_cols=129 Identities=16% Similarity=0.193 Sum_probs=105.4
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|...++.|+|....+++++.+++|+.+|+++|.+++++.+||+|.+.++++|+||..|++..+.... ..
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~------- 107 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE----RL------- 107 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC----CC-------
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC----cc-------
Confidence 5678999999544788999999999999999999999999999953389999999999987654211 00
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
++ . .+| ++++++.+++++.+|+.+|.+++++++||+|+ +| +++||||..||++
T Consensus 108 -~v---~----------------~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~g---~lvGiit~~Dil~ 160 (172)
T 3lhh_A 108 -EL---V----------------DLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE---YG---DLKGLVTLQDMMD 160 (172)
T ss_dssp -CG---G----------------GGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHH
T ss_pred -cH---H----------------HHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC---CC---CEEEEeeHHHHHH
Confidence 00 1 147 88899999999999999999999999999983 46 8999999999999
Q ss_pred HHHhhcc
Q 016691 312 CICRHFK 318 (384)
Q Consensus 312 ~l~~~~~ 318 (384)
++...+.
T Consensus 161 ~l~~~~~ 167 (172)
T 3lhh_A 161 ALTGEFF 167 (172)
T ss_dssp HHHTTCC
T ss_pred HHhCCCc
Confidence 9986543
No 21
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.74 E-value=3.4e-18 Score=142.41 Aligned_cols=124 Identities=16% Similarity=0.246 Sum_probs=99.4
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
+.++.|+|....+++++++++++.+|++.|.++++..+||+|++.++++|+||.+|+++.+.... ... +
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~---~~~--------~ 70 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA---EAF--------S 70 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC---CCC--------C
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC---CCC--------C
Confidence 56789999543568999999999999999999999999999963379999999999976542111 000 1
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
+.+ +|+. ++++.+++++.+|+.+|.+++++++||+|+ +| +++||||.+||++++
T Consensus 71 ---v~~----------------~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~~Giit~~dll~~l 124 (127)
T 3nqr_A 71 ---MDK----------------VLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDE---FG---GVSGLVTIEDILELI 124 (127)
T ss_dssp ---HHH----------------HCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECT---TS---CEEEEEEHHHHHHHC
T ss_pred ---HHH----------------HcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeC---CC---CEEEEEEHHHHHHHH
Confidence 122 2544 679999999999999999999999999983 46 899999999999987
Q ss_pred H
Q 016691 314 C 314 (384)
Q Consensus 314 ~ 314 (384)
.
T Consensus 125 ~ 125 (127)
T 3nqr_A 125 V 125 (127)
T ss_dssp -
T ss_pred h
Confidence 5
No 22
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.73 E-value=5.9e-18 Score=145.67 Aligned_cols=128 Identities=15% Similarity=0.226 Sum_probs=106.1
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeee-eCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLW-DDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~-D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
|...++.++|....+++++.+++++.+|+++|.+++++++||+ |.+.++++|+||.+|++..+.... . .
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-~---~------ 86 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-K---A------ 86 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-T---S------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-C---C------
Confidence 5678999999443478999999999999999999999999999 643489999999999987664321 0 0
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
++ . .+| ++++++.+++++.+|+.+|.+++++++||+|+ +| +++||||..||+
T Consensus 87 --~v---~----------------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~---~g---~~vGivt~~dil 138 (153)
T 3oco_A 87 --KI---S----------------TIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE---YG---GTSGIITDKDVY 138 (153)
T ss_dssp --BG---G----------------GTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT---TS---CEEEEECHHHHH
T ss_pred --cH---H----------------HHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC---CC---CEEEEeeHHHHH
Confidence 00 0 147 78999999999999999999999999999983 46 899999999999
Q ss_pred HHHHhhc
Q 016691 311 KCICRHF 317 (384)
Q Consensus 311 ~~l~~~~ 317 (384)
+++...+
T Consensus 139 ~~l~~~~ 145 (153)
T 3oco_A 139 EELFGNL 145 (153)
T ss_dssp HHHHC--
T ss_pred HHHhccC
Confidence 9998654
No 23
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.73 E-value=5.6e-18 Score=141.62 Aligned_cols=125 Identities=20% Similarity=0.319 Sum_probs=101.8
Q ss_pred hhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhh
Q 016691 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (384)
Q Consensus 153 ~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (384)
.+.++.|+|....+++++.+++++.+|++.|.++++..+||+|.+.++++|+||..|+++.+.. . ..
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~---~--~~-------- 69 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE---P--AL-------- 69 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC---T--TS--------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc---C--Cc--------
Confidence 4678999995447889999999999999999999999999999534899999999999754320 0 00
Q ss_pred hHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHH
Q 016691 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (384)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~ 312 (384)
.+ .+ +|+ +++++.+++++.+|+.+|.+++++++||+|+ +| +++||||.+||+++
T Consensus 70 ~v---~~----------------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~---~g---~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 70 DI---RS----------------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDE---HG---GISGLVTMEDVLEQ 123 (129)
T ss_dssp CG---GG----------------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC----C---CEEEEEEHHHHHHH
T ss_pred CH---HH----------------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC---CC---CEEEEEEHHHHHHH
Confidence 00 11 354 4789999999999999999999999999983 46 89999999999999
Q ss_pred HHhh
Q 016691 313 ICRH 316 (384)
Q Consensus 313 l~~~ 316 (384)
+...
T Consensus 124 l~ge 127 (129)
T 3jtf_A 124 IVGD 127 (129)
T ss_dssp HHHT
T ss_pred HhCC
Confidence 8753
No 24
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=2.2e-17 Score=138.00 Aligned_cols=129 Identities=15% Similarity=0.237 Sum_probs=106.0
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|++.++.++| ..+++++.+++++.+|++.|.++++..+||+| +++++|+||..|++..+...... .
T Consensus 1 l~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~~--~-------- 66 (133)
T 2ef7_A 1 MEEEIVKEYM--KTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKSL--E-------- 66 (133)
T ss_dssp CCCCBGGGTS--BCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCCT--T--------
T ss_pred CCcccHHHhc--cCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCCc--c--------
Confidence 4567899999 55788999999999999999999999999999 47999999999998765432110 0
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
.++ . .+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||..||++
T Consensus 67 ~~v---~----------------~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~g---~~~Giit~~dll~ 121 (133)
T 2ef7_A 67 TKA---E----------------EFMTASLITIREDSPITGALALMRQFNIRHLPVVDD---KG---NLKGIISIRDITR 121 (133)
T ss_dssp CBG---G----------------GTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHH
T ss_pred cCH---H----------------HHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECC---CC---eEEEEEEHHHHHH
Confidence 000 0 146778899999999999999999999999999983 36 8999999999999
Q ss_pred HHHhhccc
Q 016691 312 CICRHFKH 319 (384)
Q Consensus 312 ~l~~~~~~ 319 (384)
++...+..
T Consensus 122 ~~~~~~~~ 129 (133)
T 2ef7_A 122 AIDDMFET 129 (133)
T ss_dssp HHHHHC--
T ss_pred HHHHHHHH
Confidence 99887654
No 25
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.73 E-value=1e-17 Score=143.19 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=109.3
Q ss_pred HHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhh
Q 016691 149 SSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEE 228 (384)
Q Consensus 149 ~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~ 228 (384)
...|...++.|+|....+++++.+++++.+|++.|.++++..+||+|+ +++++|+||..|++..+.... ....+.
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~----~~~~~~ 83 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGLE----RIEFER 83 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCSS----SBCGGG
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhhc----ccchhH
Confidence 455778999999954456899999999999999999999999999995 689999999999987653111 111011
Q ss_pred hhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHH
Q 016691 229 LETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSD 308 (384)
Q Consensus 229 l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~d 308 (384)
....++ ..+|.++++++.+++++.+|+.+|.++++ +||+|+ +| +++|+||.+|
T Consensus 84 ~~~~~v-------------------~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~---~g---~~~Giit~~d 136 (150)
T 3lqn_A 84 LEEMKV-------------------EQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE---DG---YFEGILTRRA 136 (150)
T ss_dssp GGGCBG-------------------GGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECT---TC---BEEEEEEHHH
T ss_pred HhcCCH-------------------HHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECC---CC---cEEEEEEHHH
Confidence 111011 11478889999999999999999999997 999983 46 8999999999
Q ss_pred HHHHHHhhccc
Q 016691 309 ILKCICRHFKH 319 (384)
Q Consensus 309 il~~l~~~~~~ 319 (384)
|++++..+..+
T Consensus 137 il~~l~~~~~~ 147 (150)
T 3lqn_A 137 ILKLLNKKVRQ 147 (150)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhHh
Confidence 99999987654
No 26
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.72 E-value=2.5e-18 Score=145.23 Aligned_cols=128 Identities=13% Similarity=0.204 Sum_probs=100.3
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
+.++.|+|....+++++.+++|+.+|+++|.+++++++||+|.+.++++|+||..|+++++..... ...+
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~----------~~~~ 71 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADG----------DSDD 71 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSG----------GGCC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccC----------CCcC
Confidence 568899995446789999999999999999999999999999633799999999999765421000 0000
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
+ . .+|+. ++++.+++++.+|+.+|.+++++++||+|+ +| +++||||.+||++++
T Consensus 72 v---~----------------~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~---~g---~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 72 V---K----------------KLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDE---YG---GVAGLVTIEDVLEQI 125 (136)
T ss_dssp G---G----------------GTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHTTC
T ss_pred H---H----------------HHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeC---CC---CEEEEEEHHHHHHHH
Confidence 0 0 13644 889999999999999999999999999983 46 899999999999998
Q ss_pred Hhhc
Q 016691 314 CRHF 317 (384)
Q Consensus 314 ~~~~ 317 (384)
...+
T Consensus 126 ~~~~ 129 (136)
T 3lfr_A 126 VGDI 129 (136)
T ss_dssp ----
T ss_pred hCCC
Confidence 7643
No 27
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=1.2e-17 Score=152.19 Aligned_cols=160 Identities=14% Similarity=0.203 Sum_probs=101.3
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
..+|.++| ..+++++.+++++.+|+++|.+++++++||+|+ .++++|+||.+|+...+. . ..+
T Consensus 12 ~~~~~~~~--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~~----~-~~v--------- 74 (213)
T 1vr9_A 12 HMKVKKWV--TQDFPMVEESATVRECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLDL----D-SSV--------- 74 (213)
T ss_dssp -CBGGGGC--BSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSCT----T-SBS---------
T ss_pred ccCHHHhh--cCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhcC----C-CcH---------
Confidence 45788999 668889999999999999999999999999995 689999999999853210 0 000
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
. .+|+++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++
T Consensus 75 ----~----------------~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~lvGiit~~Dil~~~ 128 (213)
T 1vr9_A 75 ----F----------------NKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE---EM---RLKGAVSLHDFLEAL 128 (213)
T ss_dssp ----G----------------GGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT---TC---BEEEEEEHHHHHHHH
T ss_pred ----H----------------HHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC---CC---EEEEEEEHHHHHHHH
Confidence 1 147788999999999999999999999999999983 36 899999999999988
Q ss_pred HhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeecc
Q 016691 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQPA 379 (384)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~~ 379 (384)
...... . ..++.. .+.+.....++.+|++.|.+++++.+||+.
T Consensus 129 ~~~~~~--------~------~~~~~l---------~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 129 IEALAM--------D------VPGIRF---------SVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp HHSCC-------------------------------------------------------------
T ss_pred HHHhcC--------C------CCcEEE---------EEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 753310 0 011111 111223344699999999999999999863
No 28
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.72 E-value=2.6e-17 Score=158.93 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=131.4
Q ss_pred ccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCe----EEEEeehHHHHHHHHHhccCCCCCChhhhhhhhH
Q 016691 159 ELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGR----FVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (384)
Q Consensus 159 dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~----~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (384)
++|....+++++.+++++.+|++.|.+++++.+||+|+..++ ++|++|..|++..+...... .++...++
T Consensus 111 ~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~------~~~~~~~v 184 (334)
T 2qrd_G 111 KIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE------TAMLRVPL 184 (334)
T ss_dssp HHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG------GGGCCCBG
T ss_pred hhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc------hhhhhCcH
Confidence 456444555899999999999999999999999999963334 99999999998876532100 00000000
Q ss_pred HHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHH
Q 016691 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (384)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~ 314 (384)
. .+ ..+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.+|+++++.
T Consensus 185 ---~----~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 185 ---N----QM---------TIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNS---EG---TLLNVYESVDVMHLIQ 242 (334)
T ss_dssp ---G----GS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEETHHHHHHHT
T ss_pred ---H----Hh---------CCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEHHHHHHHhh
Confidence 0 00 0037889999999999999999999999999999983 36 8999999999999876
Q ss_pred hhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 315 RHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 315 ~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.... ..++.+ ++++|.+..+- .++++++++++++.+|+++|.+++++++||+
T Consensus 243 ~~~~------~~~~~~-----v~~~m~~~~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv 294 (334)
T 2qrd_G 243 DGDY------SNLDLS-----VGEALLKRPAN-FDGVHTCRATDRLDGIFDAIKHSRVHRLFVV 294 (334)
T ss_dssp TSCG------GGGGSB-----HHHHHTTCCTT-CCCCCEECTTCBHHHHHHHHHHSCCCEEEEE
T ss_pred cccc------ccccCc-----HHHHHhccccc-CCCCEEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 4321 112222 33333100000 0378999999999999999999999999997
No 29
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.72 E-value=6.5e-17 Score=142.77 Aligned_cols=128 Identities=14% Similarity=0.150 Sum_probs=107.4
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|...++.++|....+++++++++++.+|++.|.++++.++||+|.+.++++|+||.+|++.++..... .
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~~----~------- 101 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGR----V------- 101 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSS----C-------
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCCc----c-------
Confidence 56899999996556789999999999999999999999999998644899999999999876543210 0
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
.+ . |.++++++.+++++.+|+.+|.+++++++||+|. +| +++||||..||++
T Consensus 102 -~v---~------------------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde---~g---~lvGiIT~~Dil~ 153 (173)
T 3ocm_A 102 -RR---N------------------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE---FG---AIEGLVTPIDVFE 153 (173)
T ss_dssp -CG---G------------------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT---TC---CEEEEECHHHHHH
T ss_pred -hh---H------------------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC---CC---CEEEEEeHHHHHH
Confidence 00 0 1367789999999999999999999999999983 46 8999999999999
Q ss_pred HHHhhcc
Q 016691 312 CICRHFK 318 (384)
Q Consensus 312 ~l~~~~~ 318 (384)
++...+.
T Consensus 154 ~l~~~i~ 160 (173)
T 3ocm_A 154 AIAGEFP 160 (173)
T ss_dssp HHHCCCC
T ss_pred HHhCcCC
Confidence 9986543
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.72 E-value=3.7e-17 Score=137.39 Aligned_cols=129 Identities=18% Similarity=0.304 Sum_probs=104.2
Q ss_pred HHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHH-HHHHHHhccCCCCCChh
Q 016691 149 SSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDF-ILILRELGTNGSNLTEE 227 (384)
Q Consensus 149 ~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dl-i~~l~~~~~~~~~~~~~ 227 (384)
.++|.+.++.++| +.+++++.+++++.+|+++|.++++..+||+|+ +++++|+||..|+ +..+..... .
T Consensus 2 ~~~l~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~----~--- 71 (138)
T 2p9m_A 2 IDTLKNIKVKDVM--TKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD-ENKVIGIVTTTDIGYNLIRDKYT----L--- 71 (138)
T ss_dssp ---CTTCBGGGTS--BCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT-TCBEEEEEEHHHHHHHHTTTCCC----S---
T ss_pred ccccccCCHHHhh--cCCceEECCCCcHHHHHHHHHHCCCcEEEEECC-CCeEEEEEEHHHHHHHHHhhccc----C---
Confidence 3567889999999 557889999999999999999999999999995 6899999999999 765431100 0
Q ss_pred hhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcC-----CCeeeEEecCCCCCCcccEEE
Q 016691 228 ELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNK-----VATVPIIHSTGPAGSCQEILY 302 (384)
Q Consensus 228 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~-----i~~lPVvd~~~~~g~~~~lvG 302 (384)
..+ ..+ +|.++++++.+++++.+|+.+|.+++ ++++||+|+ +| +++|
T Consensus 72 ---~~~---v~~----------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~---~g---~~~G 123 (138)
T 2p9m_A 72 ---ETT---IGD----------------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK---NN---KLVG 123 (138)
T ss_dssp ---SCB---HHH----------------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT---TS---BEEE
T ss_pred ---CcC---HHH----------------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC---CC---eEEE
Confidence 001 122 26778899999999999999999999 999999983 36 8999
Q ss_pred EeeHHHHHHHHHh
Q 016691 303 LASLSDILKCICR 315 (384)
Q Consensus 303 iit~~dil~~l~~ 315 (384)
+||.+|+++++..
T Consensus 124 iit~~dll~~~~~ 136 (138)
T 2p9m_A 124 IISDGDIIRTISK 136 (138)
T ss_dssp EEEHHHHHHHHHH
T ss_pred EEEHHHHHHHHHh
Confidence 9999999999865
No 31
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.71 E-value=2.9e-17 Score=135.07 Aligned_cols=119 Identities=19% Similarity=0.375 Sum_probs=100.7
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
++.|+| ..+++++.+++++.+|++.|.++++..+||+|+ +++++|+||..|+++.+.... .. +
T Consensus 2 ~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~---~~----------v- 64 (122)
T 3kpb_A 2 LVKDIL--SKPPITAHSNISIMEAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQNK---KT----------I- 64 (122)
T ss_dssp BHHHHC--CSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTTC---CB----------G-
T ss_pred chHHhh--CCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhcc---cC----------H-
Confidence 578899 457889999999999999999999999999995 689999999999987654211 00 0
Q ss_pred HHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHh
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~ 315 (384)
. .+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||..||++++..
T Consensus 65 --~----------------~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~g---~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 65 --E----------------EIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDD---YR---RVVGIVTSEDISRLFGG 120 (122)
T ss_dssp --G----------------GTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHC-
T ss_pred --H----------------HHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECC---CC---CEEEEEeHHHHHHHhhc
Confidence 1 136778899999999999999999999999999983 36 89999999999999864
No 32
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.71 E-value=1.3e-17 Score=138.83 Aligned_cols=123 Identities=16% Similarity=0.187 Sum_probs=101.8
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
..++.++| ..+++++++++++.+|++.|.++++..+||+|. ++++|+||.+|+++.+..... . ..+
T Consensus 4 s~~v~~~m--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~---~-------~~~ 69 (128)
T 3gby_A 4 SVTFSYLA--ETDYPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPT---V-------KEK 69 (128)
T ss_dssp TCBGGGGC--BCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCC---T-------TCB
T ss_pred ceEHHHhh--cCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCc---c-------cCc
Confidence 57899999 556789999999999999999999999999994 899999999999754321100 0 000
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
...+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++
T Consensus 70 -------------------v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~---~g---~~~Giit~~dll~~l 124 (128)
T 3gby_A 70 -------------------LGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADE---DG---RYEGVVSRKRILGFL 124 (128)
T ss_dssp -------------------CCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECT---TC---BEEEEEEHHHHHHHH
T ss_pred -------------------HHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECC---CC---CEEEEEEHHHHHHHH
Confidence 01146788999999999999999999999999999983 46 899999999999998
Q ss_pred Hh
Q 016691 314 CR 315 (384)
Q Consensus 314 ~~ 315 (384)
.+
T Consensus 125 ~~ 126 (128)
T 3gby_A 125 AE 126 (128)
T ss_dssp HT
T ss_pred Hh
Confidence 75
No 33
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.71 E-value=5.7e-17 Score=139.54 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=109.2
Q ss_pred HhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhh
Q 016691 150 SFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEEL 229 (384)
Q Consensus 150 ~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l 229 (384)
..|...++.|+|....+++++.+++++.+|+++|.++++..+||+|+ .++++|+||..|++..+..... ....+
T Consensus 10 ~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~-----~~~~~ 83 (156)
T 3ctu_A 10 ETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDL-----SQEIM 83 (156)
T ss_dssp HHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTC-----CHHHH
T ss_pred HHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhccc-----ccccc
Confidence 34455789999976678999999999999999999999999999995 6899999999999887754211 00110
Q ss_pred hhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHH
Q 016691 230 ETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI 309 (384)
Q Consensus 230 ~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~di 309 (384)
...++ ..+|.++++++.+++++.+|+.+|.+++ ++||+|+ +| +++|+||.+||
T Consensus 84 ~~~~v-------------------~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~---~g---~~~Giit~~di 136 (156)
T 3ctu_A 84 ADTDI-------------------VHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA---EG---IFQGIITRKSI 136 (156)
T ss_dssp TTSBG-------------------GGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT---TS---BEEEEEETTHH
T ss_pred ccCcH-------------------HHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC---CC---eEEEEEEHHHH
Confidence 00001 0147788999999999999999999987 7999983 46 89999999999
Q ss_pred HHHHHhhcccC
Q 016691 310 LKCICRHFKHS 320 (384)
Q Consensus 310 l~~l~~~~~~~ 320 (384)
++++...+.+.
T Consensus 137 l~~l~~~~~~~ 147 (156)
T 3ctu_A 137 LKAVNALLHDF 147 (156)
T ss_dssp HHHHHHHSCC-
T ss_pred HHHHHHHHHhh
Confidence 99999876553
No 34
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.71 E-value=1.1e-16 Score=149.72 Aligned_cols=151 Identities=15% Similarity=0.153 Sum_probs=108.8
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCC-CCeEEEEeehHHHHHHHHHhccC-CC---C---
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF-KGRFVGVLSALDFILILRELGTN-GS---N--- 223 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~-~~~~vGilT~~Dli~~l~~~~~~-~~---~--- 223 (384)
+...+|.|+| +.+++++.+++++.+|.++|.+++++++||+|+. .++++|+||++||+.++...... .. .
T Consensus 10 ~~~~~v~diM--t~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~ 87 (250)
T 2d4z_A 10 KYNIQVGDIM--VRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAE 87 (250)
T ss_dssp CSSCBTTSSS--BSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCC
T ss_pred cCCCChHHhc--CCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhc
Confidence 3467899999 6789999999999999999999999999999964 36899999999999877543100 00 0
Q ss_pred -----------------------CChh------------------h----------------------------------
Q 016691 224 -----------------------LTEE------------------E---------------------------------- 228 (384)
Q Consensus 224 -----------------------~~~~------------------~---------------------------------- 228 (384)
+... +
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (250)
T 2d4z_A 88 ADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRF 167 (250)
T ss_dssp BCCC---------------------------------------------------------------------------C
T ss_pred ccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccc
Confidence 0000 0
Q ss_pred hhhhhH---HHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEee
Q 016691 229 LETHTI---SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLAS 305 (384)
Q Consensus 229 l~~~~i---~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit 305 (384)
....+. ..|.+. .+. ...+-....|...+++|.++++|.+|+.+|.+.|++++||++. | +|+||||
T Consensus 168 ~~~i~~~~~~~~~~~--~l~--~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~----G---rLVGIVT 236 (250)
T 2d4z_A 168 EEMLTLEEIYRWEQR--EKN--VVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSM----G---KLVGVVA 236 (250)
T ss_dssp CSCCBHHHHHHHHHH--HTT--CBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEE
T ss_pred ccccChhhhhhHHHH--hcC--ceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEEC----C---EEEEEEE
Confidence 000000 112111 111 1111001147888899999999999999999999999999973 7 9999999
Q ss_pred HHHHHHHHHh
Q 016691 306 LSDILKCICR 315 (384)
Q Consensus 306 ~~dil~~l~~ 315 (384)
..||++++..
T Consensus 237 rkDl~kai~~ 246 (250)
T 2d4z_A 237 LAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 35
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.70 E-value=1.5e-16 Score=134.52 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=101.5
Q ss_pred ccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCC--eEEEEeehHHHHHHHHHhccCCCCCChhhhhhh
Q 016691 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKG--RFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (384)
Q Consensus 155 ~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~--~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (384)
.++.|+| ..+++++.+++++.+|++.|.++++..+||+|+ ++ +++|+||..|++..+...... . .
T Consensus 5 ~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~~~~--~--------~ 71 (141)
T 2rih_A 5 IRTSELL--KRPPVSLPETATIREVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQRLDL--D--------G 71 (141)
T ss_dssp CBGGGGC--CSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTTCCT--T--------S
T ss_pred eEHHHHh--cCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcCCCC--C--------C
Confidence 6799999 568899999999999999999999999999995 56 999999999998765421100 0 0
Q ss_pred hHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHH
Q 016691 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (384)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~ 312 (384)
++ . .+|.++++++.++ ++.+|+.+|.+++++++||+|+ +| +++|+||.+||+++
T Consensus 72 ~v---~----------------~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~---~g---~~~Giit~~dll~~ 125 (141)
T 2rih_A 72 PA---M----------------PIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNK---NG---ELVGVLSIRDLCFE 125 (141)
T ss_dssp BS---G----------------GGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHSC
T ss_pred CH---H----------------HHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC---CC---cEEEEEEHHHHHHH
Confidence 00 0 1467899999999 9999999999999999999983 36 89999999999987
Q ss_pred HHh
Q 016691 313 ICR 315 (384)
Q Consensus 313 l~~ 315 (384)
+..
T Consensus 126 ~~~ 128 (141)
T 2rih_A 126 RAI 128 (141)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 36
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=3.5e-17 Score=142.54 Aligned_cols=132 Identities=14% Similarity=0.224 Sum_probs=107.2
Q ss_pred hhhhccccccCCCC-CcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhh
Q 016691 151 FLSTHTVYELLPDS-GKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEEL 229 (384)
Q Consensus 151 ~l~~~~~~dvmp~s-~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l 229 (384)
.|...++.|+|... .+++++.+++++.+|+++|.++++..+||+|+ .++++|+||..|+++.+...... .
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~--------~ 90 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-DGVVLGIFTERDLVKAVAGQGAA--------S 90 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHGGG--------G
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHhcCCc--------c
Confidence 34568899999432 46889999999999999999999999999995 68999999999998876543210 0
Q ss_pred hhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHH
Q 016691 230 ETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI 309 (384)
Q Consensus 230 ~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~di 309 (384)
...++ . .+|.++++++.+++++.+|+.+|.+++++++||+| + | +++|+||..||
T Consensus 91 ~~~~v---~----------------~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~-g---~~~Giit~~di 144 (165)
T 3fhm_A 91 LQQSV---S----------------VAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE---N-G---RLAGIISIGDV 144 (165)
T ss_dssp GTSBG---G----------------GTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHH
T ss_pred ccCCH---H----------------HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHH
Confidence 00000 0 14778899999999999999999999999999998 3 6 89999999999
Q ss_pred HHHHHhhc
Q 016691 310 LKCICRHF 317 (384)
Q Consensus 310 l~~l~~~~ 317 (384)
++++....
T Consensus 145 l~~~~~~~ 152 (165)
T 3fhm_A 145 VKARIGEI 152 (165)
T ss_dssp HHHTTCC-
T ss_pred HHHHHHHH
Confidence 99987654
No 37
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.70 E-value=2.7e-16 Score=129.61 Aligned_cols=121 Identities=21% Similarity=0.247 Sum_probs=100.4
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
++.|+| ..+++++.+++++.+|++.|.++++..+||+| +++++|+||..|+++.+...... ...+
T Consensus 2 ~v~~~m--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~~~---------~~~~-- 66 (125)
T 1pbj_A 2 RVEDVM--VTDVDTIDITASLEDVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGDDL---------AEVK-- 66 (125)
T ss_dssp CHHHHC--BCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTCCT---------TTSB--
T ss_pred CHHHhc--CCCceEECCCCcHHHHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCCcc---------cccC--
Confidence 577889 55788999999999999999999999999999 58999999999998766532110 0001
Q ss_pred HHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHh
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~ 315 (384)
..+ +|.++++++.+++++.+|+.+|.+++++++||+| + | +++|+||.+|+++++..
T Consensus 67 -v~~----------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~-~---~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 67 -VWE----------------VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE---D-D---EIIGVISATDILRAKMA 122 (125)
T ss_dssp -HHH----------------HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHHHHC-
T ss_pred -HHH----------------HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE---C-C---EEEEEEEHHHHHHHHHh
Confidence 122 2567899999999999999999999999999998 3 6 89999999999998864
No 38
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.69 E-value=3.2e-16 Score=135.64 Aligned_cols=140 Identities=14% Similarity=0.207 Sum_probs=111.0
Q ss_pred HHHHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCC
Q 016691 145 RDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNL 224 (384)
Q Consensus 145 ~~~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~ 224 (384)
...+.+.|...++.|+|. . .+++.+++++.+|+++|.++++..+||+|+ +++++|+||..|++..+..... .
T Consensus 7 ~~~l~~~l~~~~v~~im~--~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~----~ 78 (159)
T 3fv6_A 7 TQLLADKLKKLQVKDFQS--I-PVVIHENVSVYDAICTMFLEDVGTLFVVDR-DAVLVGVLSRKDLLRASIGQQE----L 78 (159)
T ss_dssp CHHHHHHHTTCBGGGSCB--C-CCEEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHTSCSC----T
T ss_pred HHHHHHHHhhCCHHHHcC--C-CEEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHhhccCc----c
Confidence 346788899999999994 3 459999999999999999999999999995 6899999999999876521100 0
Q ss_pred ChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEE
Q 016691 225 TEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (384)
Q Consensus 225 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvG 302 (384)
...++ . .+|.+ +++++.+++++.+|+.+|.+++++++||+|+ + |...+++|
T Consensus 79 -----~~~~v---~----------------~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~-g~~~~~vG 131 (159)
T 3fv6_A 79 -----TSVPV---H----------------IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD--T-DKGFEVIG 131 (159)
T ss_dssp -----TTCBG---G----------------GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE--C-SSSEEEEE
T ss_pred -----cCcCH---H----------------HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC--C-CcceeEEE
Confidence 00001 1 13566 8899999999999999999999999999984 2 10115999
Q ss_pred EeeHHHHHHHHHhhccc
Q 016691 303 LASLSDILKCICRHFKH 319 (384)
Q Consensus 303 iit~~dil~~l~~~~~~ 319 (384)
+||.+||++++......
T Consensus 132 iit~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 132 RVTKTNMTKILVSLSEN 148 (159)
T ss_dssp EEEHHHHHHHHHHHHTT
T ss_pred EEEHHHHHHHHHHHhhc
Confidence 99999999999876543
No 39
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.69 E-value=1e-16 Score=134.86 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=105.3
Q ss_pred hhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 151 ~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
.|...++.++| ..+++++.+++++.+|++.|.++++..+||+|+ +++++|+||..|+++.+.. .....
T Consensus 3 ~l~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~---~~~~~------ 70 (138)
T 2yzi_A 3 MDMKAPIKVYM--TKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVIV---PGLPY------ 70 (138)
T ss_dssp CCTTSBGGGTC--BCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTT---TCCCT------
T ss_pred chhhhhHHHHh--cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHh---cCCcc------
Confidence 46678999999 557889999999999999999999999999995 6899999999999632211 10000
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
..++ . .+|.++++++.+++++.+|+.+|.+++++++ |+|+ +| +++|+||.+||+
T Consensus 71 ~~~v---~----------------~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~---~g---~~~Giit~~dil 124 (138)
T 2yzi_A 71 DIPV---E----------------RIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE---EG---KIVGIFTLSDLL 124 (138)
T ss_dssp TSBG---G----------------GTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE---TT---EEEEEEEHHHHH
T ss_pred cCCH---H----------------HHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC---CC---CEEEEEEHHHHH
Confidence 0000 0 1477889999999999999999999999999 9984 36 899999999999
Q ss_pred HHHHhhcc
Q 016691 311 KCICRHFK 318 (384)
Q Consensus 311 ~~l~~~~~ 318 (384)
+++...+.
T Consensus 125 ~~~~~~~~ 132 (138)
T 2yzi_A 125 EASRRRLE 132 (138)
T ss_dssp HHHHCCSC
T ss_pred HHHHHHHH
Confidence 99986543
No 40
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.69 E-value=2.3e-16 Score=136.78 Aligned_cols=134 Identities=14% Similarity=0.207 Sum_probs=105.1
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
..++.|+| ..+++++.+++|+.+|+++|.++++..+||+|+ .++++|+||..||+..+......... ........+
T Consensus 4 ~~~v~dim--~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~-~~~~~~~~~ 79 (160)
T 2o16_A 4 MIKVEDMM--TRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQ-GDSLAFETP 79 (160)
T ss_dssp CCBGGGTS--EESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC----------CCCB
T ss_pred cCcHHHHh--cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhccccc-ccchhcccC
Confidence 46799999 557889999999999999999999999999995 68999999999998876532110000 000000000
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
+.+ +|.++++++.++++|.+|+.+|.+++++++||+| + | +++||||.+||++++
T Consensus 80 ---v~~----------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~-g---~lvGiit~~dil~~~ 133 (160)
T 2o16_A 80 ---LFE----------------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA---K-D---VLVGIITDSDFVTIA 133 (160)
T ss_dssp ---HHH----------------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE---T-T---EEEEEECHHHHHHHH
T ss_pred ---HHH----------------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE---C-C---EEEEEEEHHHHHHHH
Confidence 111 3678999999999999999999999999999998 3 6 899999999999998
Q ss_pred Hhhc
Q 016691 314 CRHF 317 (384)
Q Consensus 314 ~~~~ 317 (384)
...+
T Consensus 134 ~~~~ 137 (160)
T 2o16_A 134 INLL 137 (160)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8643
No 41
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.68 E-value=4.1e-16 Score=134.49 Aligned_cols=137 Identities=15% Similarity=0.204 Sum_probs=105.2
Q ss_pred HhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCe-eeeeeCCCCeEEEEeehHHHHHHHHHh----ccCCCCC
Q 016691 150 SFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPM-VPLWDDFKGRFVGVLSALDFILILREL----GTNGSNL 224 (384)
Q Consensus 150 ~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~-lPV~D~~~~~~vGilT~~Dli~~l~~~----~~~~~~~ 224 (384)
+-+...++.|+| ..+++++.+++|+.+|+++|.++++.. +||+|+ . +++|+||..|+++.+... ......+
T Consensus 11 ~~~~~~~v~~im--~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 11 HHMKVKDVCKLI--SLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD-N-KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TTCBHHHHTTSS--CCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET-T-EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhhccccHhhcc--cCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC-C-EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 345678899999 568999999999999999999999999 999995 4 999999999998865421 0000000
Q ss_pred Ch--hhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEE
Q 016691 225 TE--EELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (384)
Q Consensus 225 ~~--~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvG 302 (384)
.. ......+ +.+ +|.+ ++++.+++++.+|+.+|.+++++++||+|+ +| +++|
T Consensus 87 ~~~~~~~~~~~---v~~----------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~vG 140 (157)
T 1o50_A 87 RSSMKRLIAKN---ASE----------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE---KG---EIVG 140 (157)
T ss_dssp --CCCCCSSCB---HHH----------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEE
T ss_pred HHHHHHHcCCc---HHH----------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC---CC---EEEE
Confidence 00 0000000 111 3667 899999999999999999999999999983 36 8999
Q ss_pred EeeHHHHHHHHHhh
Q 016691 303 LASLSDILKCICRH 316 (384)
Q Consensus 303 iit~~dil~~l~~~ 316 (384)
+||.+||++++...
T Consensus 141 iit~~dll~~l~~~ 154 (157)
T 1o50_A 141 DLNSLEILLALWKG 154 (157)
T ss_dssp EEEHHHHHHHHHHS
T ss_pred EEEHHHHHHHHHHh
Confidence 99999999998764
No 42
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.68 E-value=5.9e-17 Score=137.90 Aligned_cols=143 Identities=16% Similarity=0.232 Sum_probs=104.1
Q ss_pred hhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhh
Q 016691 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (384)
Q Consensus 153 ~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (384)
+..++.|+|....+++++++++++.+|+++|.++++..+||+|+ +++++|+||..|++..+.... .. ..+.
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~----~~--~~~~-- 73 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE-DWKLVGLVSDYDLLALDSGDS----TW--KTFN-- 73 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHTTCC--------CC--HHHH--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC-CCeEEEEEEHHHHHHhhcccC----cc--cchH--
Confidence 35789999955557899999999999999999999999999995 689999999999975322110 00 0000
Q ss_pred hHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHH
Q 016691 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (384)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~ 312 (384)
.+........ ......+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+||+++
T Consensus 74 ---~~~~~~~~~~----~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~---~g---~~~Giit~~dil~~ 140 (152)
T 4gqw_A 74 ---AVQKLLSKTN----GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS---DG---KLVGIITRGNVVRA 140 (152)
T ss_dssp ---HHHTC---------CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT---TS---BEEEEEEHHHHHHH
T ss_pred ---HHHHHHHHhc----cccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC---CC---cEEEEEEHHHHHHH
Confidence 0000000000 00000136778889999999999999999999999999983 46 89999999999999
Q ss_pred HHhhc
Q 016691 313 ICRHF 317 (384)
Q Consensus 313 l~~~~ 317 (384)
+....
T Consensus 141 ~~~~~ 145 (152)
T 4gqw_A 141 ALQIK 145 (152)
T ss_dssp HHC--
T ss_pred HHhcc
Confidence 98654
No 43
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=1.6e-16 Score=133.22 Aligned_cols=125 Identities=18% Similarity=0.254 Sum_probs=100.0
Q ss_pred cccccCC-CCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhH
Q 016691 156 TVYELLP-DSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (384)
Q Consensus 156 ~~~dvmp-~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (384)
++.|+|. ...+++++.+++++.+|++.|.++++..+||+| +++++|+||..|+++.+.. .... ....++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~---~~~~-----~~~~~v 76 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSYL---LDKP-----VKDTQV 76 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGGG---SSSC-----GGGSBG
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHHH---cCCC-----cccCCH
Confidence 7889993 116788999999999999999999999999998 4899999999999753321 1000 000000
Q ss_pred HHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHH
Q 016691 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (384)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~ 314 (384)
..+|.++++++.+++++.+|+.+|.+++++++||+|+ | +++|+||.+||++++.
T Consensus 77 -------------------~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~----g---~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 77 -------------------KEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD----G---KVIGLLSIGDLVKDAI 130 (135)
T ss_dssp -------------------GGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHHHHH
T ss_pred -------------------HHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEeC----C---EEEEEEEHHHHHHHHH
Confidence 0147788999999999999999999999999999982 6 8999999999999987
Q ss_pred hh
Q 016691 315 RH 316 (384)
Q Consensus 315 ~~ 316 (384)
.+
T Consensus 131 ~~ 132 (135)
T 2rc3_A 131 SQ 132 (135)
T ss_dssp C-
T ss_pred hc
Confidence 54
No 44
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.68 E-value=1.9e-16 Score=136.35 Aligned_cols=128 Identities=16% Similarity=0.257 Sum_probs=103.6
Q ss_pred ccccccCCCC----CcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 155 HTVYELLPDS----GKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 155 ~~~~dvmp~s----~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
.++.|+|... .+++++.+++++.+|+++|.++++..+||.| +++++|+||..|+++.+....... .
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~--------~ 76 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSS--------K 76 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCS--------S
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCc--------c
Confidence 4688888543 6788999999999999999999999999954 689999999999987654322110 0
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
..+ +.+ +|.++++++.+++++.+|+.+|.+++++++||+|+ | +++|+||.+||+
T Consensus 77 ~~~---v~~----------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~----g---~~~Giit~~dil 130 (157)
T 4fry_A 77 ATR---VEE----------------IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG----G---KLIGLISIGDLV 130 (157)
T ss_dssp SCB---HHH----------------HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHH
T ss_pred ccC---HHH----------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC----C---EEEEEEEHHHHH
Confidence 001 122 25778899999999999999999999999999982 6 899999999999
Q ss_pred HHHHhhcc
Q 016691 311 KCICRHFK 318 (384)
Q Consensus 311 ~~l~~~~~ 318 (384)
+++.....
T Consensus 131 ~~l~~~~~ 138 (157)
T 4fry_A 131 KSVIADQQ 138 (157)
T ss_dssp HHHHTTCC
T ss_pred HHHHHHHH
Confidence 99987654
No 45
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.67 E-value=3.6e-16 Score=134.11 Aligned_cols=136 Identities=18% Similarity=0.279 Sum_probs=105.7
Q ss_pred HHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCCh
Q 016691 147 RISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTE 226 (384)
Q Consensus 147 ~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~ 226 (384)
...+.|+..++.++ .+++++.+++++.+|+++|.++++..+||+|+ +|+++|+||..|++..+...... ..
T Consensus 15 ~~~~~l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~vGivt~~dl~~~~~~~~~~--~~-- 85 (152)
T 2uv4_A 15 FMSKSLEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTYN--NL-- 85 (152)
T ss_dssp HHTSBHHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEHHHHHHHHHCSSCC--CT--
T ss_pred HHHhhHHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECC-CCcEEEEEeHHHHHHHhcchhhh--hh--
Confidence 55667788899997 56889999999999999999999999999995 68999999999998766422100 00
Q ss_pred hhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeH
Q 016691 227 EELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASL 306 (384)
Q Consensus 227 ~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~ 306 (384)
..++ .+.+.. ...|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.
T Consensus 86 ----~~~v---~~~m~~----------~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~vGiit~ 142 (152)
T 2uv4_A 86 ----DVSV---TKALQH----------RSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE---ND---VVKGIVSL 142 (152)
T ss_dssp ----TSBG---GGGGGT----------CCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---BEEEEEEH
T ss_pred ----cchH---HHHHhh----------hhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC---CC---eEEEEEEH
Confidence 0001 111100 0012367899999999999999999999999999983 46 89999999
Q ss_pred HHHHHHHH
Q 016691 307 SDILKCIC 314 (384)
Q Consensus 307 ~dil~~l~ 314 (384)
+||++++.
T Consensus 143 ~dil~~l~ 150 (152)
T 2uv4_A 143 SDILQALV 150 (152)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99999875
No 46
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.67 E-value=1.4e-16 Score=136.20 Aligned_cols=121 Identities=12% Similarity=0.225 Sum_probs=99.6
Q ss_pred ccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhH
Q 016691 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (384)
Q Consensus 155 ~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (384)
.++.|+|....+++++.+++++.+|+++|.++++..+||+|+ +++++|+||..|+++.+..... . ...++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~----~-----~~~~v 97 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD-DMNIIGIFTDGDLRRVFDTGVD----M-----RDASI 97 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-TCBEEEEEEHHHHHHHHCSSSC----C-----TTCBH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-CCcEEEEecHHHHHHHHhcCCC----c-----ccCcH
Confidence 589999944337889999999999999999999999999995 6899999999999876642110 0 00111
Q ss_pred HHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
.+ +|.++++++.+++++.+|+.+|.+++++++||+|+ + +++|+||.+||++
T Consensus 98 ---~~----------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~----~---~~~Giit~~dil~ 148 (149)
T 3k2v_A 98 ---AD----------------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG----D---HLLGVVHMHDLLR 148 (149)
T ss_dssp ---HH----------------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHTC
T ss_pred ---HH----------------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC----C---EEEEEEEHHHhhc
Confidence 22 25678899999999999999999999999999983 5 7999999999975
No 47
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.67 E-value=1.3e-16 Score=139.92 Aligned_cols=155 Identities=17% Similarity=0.234 Sum_probs=106.0
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCC--CCCChhhhhh
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNG--SNLTEEELET 231 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~--~~~~~~~l~~ 231 (384)
..+|.|+|....+++++.+++|+.+|+++|.++++.++||+|+ .++++|+||..||++.+....... ..+....-..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 81 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDST 81 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC-------------------C
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhhhhhccccCCcccccccccch
Confidence 3678999954447899999999999999999999999999995 689999999999985321110000 0000000000
Q ss_pred h-hHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 232 H-TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 232 ~-~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
+ .+............ .....+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++||||.+||+
T Consensus 82 ~~~~~~~~~~~~~~~~----~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~vGiit~~dil 151 (180)
T 3sl7_A 82 WKTFNELQKLISKTYG----KVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA---DG---KLIGILTRGNVV 151 (180)
T ss_dssp CCSHHHHHHHHHTTTT----CBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT---TC---BEEEEEEHHHHH
T ss_pred hhhhHHHHHHHhcccc----ccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC---CC---eEEEEEEHHHHH
Confidence 0 00000111000000 0001247788899999999999999999999999999983 46 899999999999
Q ss_pred HHHHhhccc
Q 016691 311 KCICRHFKH 319 (384)
Q Consensus 311 ~~l~~~~~~ 319 (384)
+++......
T Consensus 152 ~~~~~~~~~ 160 (180)
T 3sl7_A 152 RAALQIKRN 160 (180)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhhh
Confidence 999876544
No 48
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.67 E-value=2.5e-16 Score=135.99 Aligned_cols=138 Identities=11% Similarity=0.086 Sum_probs=104.8
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeC-CCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDD-FKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~-~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
+...++.|+| +.+++++.+++++.+|+++|.++++.++||+|+ +.++++|+||..|++..+...... .. ...
T Consensus 10 ~~~~~v~dim--~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~--~~---~~~ 82 (164)
T 2pfi_A 10 SHHVRVEHFM--NHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPS--RA---PGH 82 (164)
T ss_dssp CCSCBHHHHC--BCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC------------CC
T ss_pred ccCCCHHHHc--CCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccc--cC---Ccc
Confidence 4567899999 557889999999999999999999999999995 368999999999998766422110 00 000
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCC-ceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRP-LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI 309 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~-~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~di 309 (384)
..++ .+.+..- .+..+ ++++.+++++.+|+.+|.+++++++||+|+ | +++||||.+||
T Consensus 83 ~~~v---~~~m~~~-----------~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~----g---~l~Giit~~di 141 (164)
T 2pfi_A 83 QQCL---QDILARG-----------CPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR----G---RAVGCVSWVEM 141 (164)
T ss_dssp CCBH---HHHHHTT-----------CCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET----T---EEEEEEEHHHH
T ss_pred cchh---hhhhccc-----------ccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC----C---EEEEEEEHHHH
Confidence 0111 2332110 01122 789999999999999999999999999982 6 89999999999
Q ss_pred HHHHHhhc
Q 016691 310 LKCICRHF 317 (384)
Q Consensus 310 l~~l~~~~ 317 (384)
++++....
T Consensus 142 l~~~~~~~ 149 (164)
T 2pfi_A 142 KKAISNLT 149 (164)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99998755
No 49
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.67 E-value=2e-16 Score=139.44 Aligned_cols=158 Identities=11% Similarity=0.118 Sum_probs=108.5
Q ss_pred HhhhhccccccCCCCCc--EEEE--ecCccHHHHHHHHHHcCCCeeeee--eCCCCeEEEEeehHHHHHHHHHhccCCCC
Q 016691 150 SFLSTHTVYELLPDSGK--VTAL--DVNLAVKQAFHVLYEQGLPMVPLW--DDFKGRFVGVLSALDFILILRELGTNGSN 223 (384)
Q Consensus 150 ~~l~~~~~~dvmp~s~~--vv~i--~~~~~l~~A~~~L~~~~i~~lPV~--D~~~~~~vGilT~~Dli~~l~~~~~~~~~ 223 (384)
.++...++.|+|....+ ++++ ++++++.+|+++|.+++++.+||+ | +.++++|+||..|++..+.........
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d-~~~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSR-ESQRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCT-TTCBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEEC-CCCeEEEEEEHHHHHHHHHhhcccCCC
Confidence 57788999999965422 6777 999999999999999999999999 5 468999999999999876543111000
Q ss_pred CChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEE
Q 016691 224 LTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYL 303 (384)
Q Consensus 224 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGi 303 (384)
+....+....-........... . .....+|.++++++.++++|.+|+.+|.+++++++||+|+ | +++||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~--~--~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~----g---~~vGi 153 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPP--T--LKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN----G---RLLGI 153 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCC--C--EECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEE
T ss_pred ccccceeecccCCccccccccc--C--ccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEEC----C---EEEEE
Confidence 0000000000000000000000 0 0011247788999999999999999999999999999972 6 89999
Q ss_pred eeHHHHHHHHHhhccc
Q 016691 304 ASLSDILKCICRHFKH 319 (384)
Q Consensus 304 it~~dil~~l~~~~~~ 319 (384)
||.+||++++......
T Consensus 154 it~~dll~~l~~~~~~ 169 (185)
T 2j9l_A 154 ITKKDVLKHIAQMANQ 169 (185)
T ss_dssp EEHHHHHHHHHHHCC-
T ss_pred EEHHHHHHHHHHhhcc
Confidence 9999999999876543
No 50
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.66 E-value=8.4e-17 Score=139.08 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=99.0
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|...++.|+|....+++++.+++++.+|++.|.++++..+||+|.+.++++|+||..|++.++... ..
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------------~~ 102 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP------------EQ 102 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG------------GG
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC------------Cc
Confidence 568999999955457899999999999999999999999999996335999999999997543110 00
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
.+ +.+ +|+ +++++.+++++.+|+.+|.+++++++||+|+ +| +++||||..||+
T Consensus 103 ~~---v~~----------------im~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~g---~~~Givt~~Dil 155 (156)
T 3oi8_A 103 FH---LKS----------------ILR-PAVFVPEGKSLTALLKEFREQRNHMAIVIDE---YG---GTSGLVTFEDII 155 (156)
T ss_dssp CC---HHH----------------HCB-CCCEEETTSBHHHHHHHHHHTTCCEEEEECT---TS---SEEEEEEHHHHC
T ss_pred cc---HHH----------------HcC-CCEEECCCCCHHHHHHHHHhcCCeEEEEECC---CC---CEEEEEEHHHhc
Confidence 01 122 254 4789999999999999999999999999983 46 899999999986
No 51
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=6.4e-16 Score=130.37 Aligned_cols=132 Identities=17% Similarity=0.231 Sum_probs=98.9
Q ss_pred hccccc---cCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 154 THTVYE---LLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 154 ~~~~~d---vmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
..++.+ +| ..+++++.+++++.+|+++|.++++..+||+|+ .++++|+||..|++..+...... ..
T Consensus 7 ~~~v~~~~~~~--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~--------~~ 75 (144)
T 2nyc_A 7 KIPIGDLNIIT--QDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGIYN--------DL 75 (144)
T ss_dssp GSBGGGSSCCB--CSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHTC------------C
T ss_pred hcchhhcCCCC--CCCceEECCCCcHHHHHHHHHHcCcceeeEEcC-CCcEEEEEcHHHHHHHhcccccc--------cC
Confidence 456666 56 467889999999999999999999999999995 68999999999998766431100 00
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
..++ .+.+.... .-..+++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+||+
T Consensus 76 ~~~v---~~~m~~~~----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~---~g---~~~Giit~~dil 136 (144)
T 2nyc_A 76 SLSV---GEALMRRS----------DDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD---VG---RLVGVLTLSDIL 136 (144)
T ss_dssp CSBH---HHHHHHCC----------------CEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---BEEEEEEHHHHH
T ss_pred CccH---HHHHhcCc----------cccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC---CC---CEEEEEEHHHHH
Confidence 1112 23321100 00136889999999999999999999999999983 36 899999999999
Q ss_pred HHHHh
Q 016691 311 KCICR 315 (384)
Q Consensus 311 ~~l~~ 315 (384)
+++..
T Consensus 137 ~~l~~ 141 (144)
T 2nyc_A 137 KYILL 141 (144)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 52
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.66 E-value=1.5e-16 Score=133.00 Aligned_cols=126 Identities=17% Similarity=0.243 Sum_probs=99.6
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHH-HHHHhccCCCCCChhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFIL-ILRELGTNGSNLTEEELE 230 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~-~l~~~~~~~~~~~~~~l~ 230 (384)
++..++.|+| +.+++++.+++++.+|++.|.++++..+||+|+ +++++|+||..|++. .+..... ..
T Consensus 5 ~~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~---------~~ 72 (133)
T 1y5h_A 5 FTMTTARDIM--NAGVTCVGEHETLTAAAQYMREHDIGALPICGD-DDRLHGMLTDRDIVIKGLAAGLD---------PN 72 (133)
T ss_dssp ---CCHHHHS--EETCCCEETTSBHHHHHHHHHHHTCSEEEEECG-GGBEEEEEEHHHHHHTTGGGTCC---------TT
T ss_pred hhhcCHHHHh--cCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC-CCeEEEEEeHHHHHHHHHhcCCC---------cc
Confidence 4456889999 457889999999999999999999999999985 689999999999973 3321110 00
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
..+ +.+. |.++++++++++++.+|+.+|.+++++++||+| + | +++|+||.+||+
T Consensus 73 ~~~---v~~~----------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~-g---~~~Giit~~dil 126 (133)
T 1y5h_A 73 TAT---AGEL----------------ARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS---E-H---RLVGIVTEADIA 126 (133)
T ss_dssp TSB---HHHH----------------HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHH
T ss_pred ccC---HHHH----------------hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHHH
Confidence 011 1222 467889999999999999999999999999998 3 6 899999999999
Q ss_pred HHHHh
Q 016691 311 KCICR 315 (384)
Q Consensus 311 ~~l~~ 315 (384)
+++..
T Consensus 127 ~~l~~ 131 (133)
T 1y5h_A 127 RHLPE 131 (133)
T ss_dssp HTCC-
T ss_pred HHHHh
Confidence 98643
No 53
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.65 E-value=3.9e-16 Score=134.09 Aligned_cols=137 Identities=20% Similarity=0.228 Sum_probs=105.4
Q ss_pred hhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 151 ~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
.|...++.|+|....+++++.+++++.+|++.|.++++..+||+|+ +++++|+||..|++..+... .........
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~----~~~~~~~~~ 81 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILGL----ERIEFERLE 81 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBCS----SSBCGGGGG
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhcc----cccchHHhc
Confidence 4567899999954347889999999999999999999999999995 68999999999997654211 001000000
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil 310 (384)
..++ ..+|.++++++.+++++.+|+.+|.++++ +||+|+ +| +++|+||.+||+
T Consensus 82 ~~~v-------------------~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~---~g---~~~Giit~~dil 134 (157)
T 2emq_A 82 TMKV-------------------EEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND---DG---YFAGIFTRREVL 134 (157)
T ss_dssp TCBG-------------------GGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS---SS---SEEEEEEHHHHH
T ss_pred CCcH-------------------HHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC---CC---eEEEEEEHHHHH
Confidence 0000 11477889999999999999999999988 999983 36 899999999999
Q ss_pred HHHHhhccc
Q 016691 311 KCICRHFKH 319 (384)
Q Consensus 311 ~~l~~~~~~ 319 (384)
+++......
T Consensus 135 ~~~~~~~~~ 143 (157)
T 2emq_A 135 KQLNKQLHR 143 (157)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHhhc
Confidence 999877654
No 54
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.65 E-value=5.4e-16 Score=133.90 Aligned_cols=136 Identities=18% Similarity=0.205 Sum_probs=105.3
Q ss_pred hhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (384)
|...++.++|....+++++.+++++.+|+++|.++++..+||+|+ .++++|+||..|++..+.... .+.......
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~----~~~~~~~~~ 85 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP-SYRLHGLIGTNMIMNSIFGLE----RIEFEKLDQ 85 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT-TCBEEEEEEHHHHHHHHBCSS----SBCGGGTTT
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC-CCCEEEEeEHHHHHHHhhhhc----ccchhhhcc
Confidence 556889999943237889999999999999999999999999995 689999999999987653210 000000111
Q ss_pred hhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
.++ .+ +|.++++++.+++++.+|+.+|.++++ +||+|. +| +++|+||.+||++
T Consensus 86 ~~v---~~----------------~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~---~g---~~vGiit~~dil~ 138 (159)
T 1yav_A 86 ITV---EE----------------VMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND---EQ---VFEGIFTRRVVLK 138 (159)
T ss_dssp SBH---HH----------------HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT---TC---BEEEEEEHHHHHH
T ss_pred CCH---HH----------------hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC---CC---eEEEEEEHHHHHH
Confidence 111 22 267789999999999999999999987 999983 36 8999999999999
Q ss_pred HHHhhccc
Q 016691 312 CICRHFKH 319 (384)
Q Consensus 312 ~l~~~~~~ 319 (384)
++...+..
T Consensus 139 ~~~~~~~~ 146 (159)
T 1yav_A 139 ELNKHIRS 146 (159)
T ss_dssp HHHHHC--
T ss_pred HHHHHHHh
Confidence 99876654
No 55
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.64 E-value=1.1e-15 Score=138.72 Aligned_cols=133 Identities=15% Similarity=0.193 Sum_probs=109.9
Q ss_pred HHHHHHHHhh--hhccccccCCCCCcEEEEecCccHHHHHHHHHHc---CCCeeeeeeCCCCeEEEEeehHHHHHHHHHh
Q 016691 143 LSRDRISSFL--STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ---GLPMVPLWDDFKGRFVGVLSALDFILILREL 217 (384)
Q Consensus 143 ~~~~~~~~~l--~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~---~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~ 217 (384)
.++..++..| ...++.++| +..++++.+++|+.+|++.|.++ ++..+||+|. .++++|+||.+|++..
T Consensus 40 ~e~~~i~~~l~~~~~~v~~iM--~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~---- 112 (205)
T 3kxr_A 40 RQRQRFELYDQYSENEIGRYT--DHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE-ADKYLGTVRRYDIFKH---- 112 (205)
T ss_dssp HHHHHHHHHHHSCTTCGGGGC--BCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT-TCBEEEEEEHHHHTTS----
T ss_pred HHHHHHHHHhCCCcchHHhhc--cCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC-CCeEEEEEEHHHHHhC----
Confidence 3555666655 477899999 56889999999999999999998 8999999995 7899999999998521
Q ss_pred ccCCCCCChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCc
Q 016691 218 GTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSC 297 (384)
Q Consensus 218 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~ 297 (384)
. ... ++ . .+|+++++++.+++++.+|+++|.+++++++||+|+ +|
T Consensus 113 --~-~~~--------~v---~----------------~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~---~g-- 157 (205)
T 3kxr_A 113 --E-PHE--------PL---I----------------SLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDD---AG-- 157 (205)
T ss_dssp --C-TTS--------BG---G----------------GGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT---TS--
T ss_pred --C-Ccc--------hH---H----------------HHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC---CC--
Confidence 0 000 00 1 147888999999999999999999999999999983 46
Q ss_pred ccEEEEeeHHHHHHHHHhhcc
Q 016691 298 QEILYLASLSDILKCICRHFK 318 (384)
Q Consensus 298 ~~lvGiit~~dil~~l~~~~~ 318 (384)
+++||||..||++.+.....
T Consensus 158 -~lvGiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 158 -ELIGRVTLRAATALVREHYE 177 (205)
T ss_dssp -BEEEEEEHHHHHHHHHHHHC
T ss_pred -eEEEEEEHHHHHHHHHHHHH
Confidence 89999999999999987654
No 56
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.63 E-value=1e-15 Score=135.66 Aligned_cols=125 Identities=19% Similarity=0.291 Sum_probs=102.5
Q ss_pred ccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhH
Q 016691 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (384)
Q Consensus 155 ~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (384)
.++.++| ...++++.+++|+.+|+++|.++++..+||+|. +++++|+||..|++..+...... ....++
T Consensus 9 ~~v~~im--~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~-~g~~vGivt~~dl~~~~~~~~~~--------~~~~~v 77 (184)
T 1pvm_A 9 MRVEKIM--NSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD-NGNDVGLLSERSIIKRFIPRNKK--------PDEVPI 77 (184)
T ss_dssp CBGGGTS--BTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHTGGGCCC--------GGGSBG
T ss_pred cCHHHhc--CCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHhhcccC--------cccCCH
Confidence 6899999 567899999999999999999999999999985 58999999999997654311000 000000
Q ss_pred HHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHH
Q 016691 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (384)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~ 314 (384)
..+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||..||++++.
T Consensus 78 -------------------~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 78 -------------------RLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDD---PG---RVVGIVTLTDLSRYLS 132 (184)
T ss_dssp -------------------GGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECT---TC---CEEEEEEHHHHTTTSC
T ss_pred -------------------HHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcC---CC---eEEEEEEHHHHHHHHH
Confidence 0147788999999999999999999999999999983 36 8999999999999876
Q ss_pred h
Q 016691 315 R 315 (384)
Q Consensus 315 ~ 315 (384)
.
T Consensus 133 ~ 133 (184)
T 1pvm_A 133 R 133 (184)
T ss_dssp H
T ss_pred h
Confidence 5
No 57
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.59 E-value=5e-15 Score=137.21 Aligned_cols=148 Identities=14% Similarity=0.216 Sum_probs=98.8
Q ss_pred hccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCC------------
Q 016691 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNG------------ 221 (384)
Q Consensus 154 ~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~------------ 221 (384)
..++.|+| +.+++++.+++++.+|+++|.+++++++||+|+ +|+++|+||..|+++.+.......
T Consensus 6 ~~~v~~im--~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 6 KLKVEDLE--MDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp CCBGGGSC--CBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred cCcHHHhc--CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 35799999 567889999999999999999999999999995 689999999999998764321000
Q ss_pred ------------------------CCCChhhhhhh---------------------------------hH-HHHHH----
Q 016691 222 ------------------------SNLTEEELETH---------------------------------TI-SAWKV---- 239 (384)
Q Consensus 222 ------------------------~~~~~~~l~~~---------------------------------~i-~~~~~---- 239 (384)
.+...+.+... .. ..+.+
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence 00000000000 00 00000
Q ss_pred --------------HHHhhccccccCCCCCCCC-CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEe
Q 016691 240 --------------GKLQLNLKRQMDGNGRPCP-RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLA 304 (384)
Q Consensus 240 --------------~~~~~~~~~~~~~~~~~m~-~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGii 304 (384)
..+.+.. ......+|+ ++++++++++++.+|+++|.+++++++||+|+ +| +++|||
T Consensus 163 ~~~~~i~t~~d~~~~~~~~~~---~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~---~~---~~~Gii 233 (245)
T 3l2b_A 163 NNITVITTPHDSFTASRLIVQ---SLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE---NN---KVVGSI 233 (245)
T ss_dssp HTCEEEECSSCHHHHHHHGGG---GSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEE
T ss_pred cCCeEEEeCCChHHHHHHHhc---CCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC---CC---eEEEEE
Confidence 0000000 000012577 89999999999999999999999999999983 36 899999
Q ss_pred eHHHHHHHH
Q 016691 305 SLSDILKCI 313 (384)
Q Consensus 305 t~~dil~~l 313 (384)
|.+|++++.
T Consensus 234 t~~dll~~~ 242 (245)
T 3l2b_A 234 ARFHLISTH 242 (245)
T ss_dssp ECC------
T ss_pred EHHHhhchh
Confidence 999999874
No 58
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.54 E-value=3.6e-14 Score=135.06 Aligned_cols=131 Identities=21% Similarity=0.268 Sum_probs=107.2
Q ss_pred HHHHHHhh--hhccccccCCCCCcEEEEecCccHHHHHHHHHHc-----CCCeeeeeeCCCCeEEEEeehHHHHHHHHHh
Q 016691 145 RDRISSFL--STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ-----GLPMVPLWDDFKGRFVGVLSALDFILILREL 217 (384)
Q Consensus 145 ~~~~~~~l--~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~-----~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~ 217 (384)
...+++.+ ...++.++| +..++++.+++++.+|++.|.++ ++..+||+|+ .++++|+||..|++..
T Consensus 125 ~~~i~~ll~~~~~~v~~iM--~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~dll~~---- 197 (286)
T 2oux_A 125 AGEIKELLHYEDETAGAIM--TTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRDLIVN---- 197 (286)
T ss_dssp HHHHHHHTTSCTTBHHHHC--BSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHHHTTS----
T ss_pred HHHHHHHhcCChHHHHHhC--CCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHHHHcC----
Confidence 44455555 367899999 55889999999999999999998 8888999995 6899999999998632
Q ss_pred ccCCCCCChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCc
Q 016691 218 GTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSC 297 (384)
Q Consensus 218 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~ 297 (384)
. ... + +.+ +|.++++++++++++.+|+.+|.+++++++||+|. +|
T Consensus 198 --~-~~~--------~---v~~----------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~---~g-- 242 (286)
T 2oux_A 198 --D-DDT--------L---IAD----------------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY---DD-- 242 (286)
T ss_dssp --C-TTS--------B---HHH----------------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TC--
T ss_pred --C-CCC--------c---HHH----------------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC---CC--
Confidence 0 000 1 122 26788999999999999999999999999999983 46
Q ss_pred ccEEEEeeHHHHHHHHHhhcc
Q 016691 298 QEILYLASLSDILKCICRHFK 318 (384)
Q Consensus 298 ~~lvGiit~~dil~~l~~~~~ 318 (384)
+++||||..||++.+.....
T Consensus 243 -~lvGiIT~~Dil~~i~~e~~ 262 (286)
T 2oux_A 243 -HLLGIVTVDDIIDVIDDEAA 262 (286)
T ss_dssp -BEEEEEEHHHHHHHHHHHHH
T ss_pred -eEEEEEEHHHHHHHHHHHhH
Confidence 89999999999999887543
No 59
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.51 E-value=4.6e-14 Score=145.47 Aligned_cols=131 Identities=15% Similarity=0.138 Sum_probs=105.1
Q ss_pred hhhccccccCCCCCcEEEEecC-ccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhh
Q 016691 152 LSTHTVYELLPDSGKVTALDVN-LAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (384)
Q Consensus 152 l~~~~~~dvmp~s~~vv~i~~~-~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (384)
+...++.|+| +.+++++.++ +|+.+|+++|.+++++.+||+|.+.++++||||.+||++.+....... ..
T Consensus 381 l~~~~V~diM--~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~-~~------ 451 (527)
T 3pc3_A 381 WWSLAIAELE--LPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQ-SD------ 451 (527)
T ss_dssp TTTSBGGGGC--CCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCT-TS------
T ss_pred ccCCcHHHhC--cCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcC-CC------
Confidence 4468899999 5688899999 999999999999999999999933689999999999998765421110 00
Q ss_pred hhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCC-CCCCcccEEEEeeHHHH
Q 016691 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTG-PAGSCQEILYLASLSDI 309 (384)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~-~~g~~~~lvGiit~~di 309 (384)
++ . ++|+++++++.++++|.+|+++|.++++ +||+|++. ..| +++||||..||
T Consensus 452 --~V---~----------------~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g---~lvGIVT~~Dl 505 (527)
T 3pc3_A 452 --PA---I----------------KALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKV---ELKALATKLDV 505 (527)
T ss_dssp --BG---G----------------GGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCE---EEEEEEEHHHH
T ss_pred --cH---H----------------HHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCC---eEEEEEEHHHH
Confidence 00 1 1478899999999999999999988776 69998410 025 89999999999
Q ss_pred HHHHHhhc
Q 016691 310 LKCICRHF 317 (384)
Q Consensus 310 l~~l~~~~ 317 (384)
++++..+.
T Consensus 506 l~~l~~~~ 513 (527)
T 3pc3_A 506 TTFIAAGK 513 (527)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcc
Confidence 99998764
No 60
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.51 E-value=8.4e-14 Score=131.81 Aligned_cols=122 Identities=18% Similarity=0.303 Sum_probs=100.4
Q ss_pred hhccccccCCCCCcEEEEecCccHHHHHHHHHHc-----CCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChh
Q 016691 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ-----GLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEE 227 (384)
Q Consensus 153 ~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~-----~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~ 227 (384)
...++.++| ...++++.+++++.+|++.|.++ ++..+||+|. .++++|+||.+|++.. ... ..+
T Consensus 133 ~~~~v~~iM--~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~----~~~-~~v--- 201 (278)
T 2yvy_A 133 EEDEAGGLM--TPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVA----DPR-TRV--- 201 (278)
T ss_dssp CTTBGGGTC--BSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT-TCBEEEEEEHHHHHHS----CTT-CBS---
T ss_pred CcchHHhhc--CCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC-CCCEEEEEEHHHHhcC----CCC-CcH---
Confidence 367899999 55889999999999999999998 8999999996 6899999999999642 000 000
Q ss_pred hhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHH
Q 016691 228 ELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLS 307 (384)
Q Consensus 228 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~ 307 (384)
..+|.++++++++++++.+|+.+|.+++++++||+|. +| +++||||..
T Consensus 202 --------------------------~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g---~lvGivT~~ 249 (278)
T 2yvy_A 202 --------------------------AEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE---EG---RLVGIVTVD 249 (278)
T ss_dssp --------------------------TTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT---TS---BEEEEEEHH
T ss_pred --------------------------HHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC---CC---eEEEEEEHH
Confidence 1147788999999999999999999999999999983 46 899999999
Q ss_pred HHHHHHHhhc
Q 016691 308 DILKCICRHF 317 (384)
Q Consensus 308 dil~~l~~~~ 317 (384)
||++.+....
T Consensus 250 Dil~~i~~e~ 259 (278)
T 2yvy_A 250 DVLDVLEAEA 259 (278)
T ss_dssp HHHHHC----
T ss_pred HHHHHHHHHh
Confidence 9999987643
No 61
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.50 E-value=2.4e-14 Score=152.17 Aligned_cols=84 Identities=18% Similarity=0.167 Sum_probs=71.6
Q ss_pred CCCCCceeEEEEEeeC--CCceEEEEecCCCCCCC-CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEee--cCCCCCe
Q 016691 14 GVVGSILVPVRFIWPN--GGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR--HDENQPH 88 (384)
Q Consensus 14 ~~~~~~~~~v~f~w~~--~~~~V~v~GsF~~W~~~-~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~--~d~~~p~ 88 (384)
+......++|+|+++. +|++|+|+||||+|++. .+|++. +|.|++++.||||+|+|||+|||+|. +||++|.
T Consensus 11 ~~~~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~---~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~ 87 (696)
T 4aee_A 11 GKGRKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKI---EEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEE 87 (696)
T ss_dssp TTTEEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEE---TTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCC
T ss_pred CCCCCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEec---CCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCc
Confidence 3345567888888876 68999999999999764 688774 79999999999999999999999999 7888773
Q ss_pred ---eeCCCCCeeeEE
Q 016691 89 ---VSGNYGVVNCVY 100 (384)
Q Consensus 89 ---~~d~~G~~nNvi 100 (384)
+.|.+|..|++.
T Consensus 88 ~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 88 KKCVHTSFFPEYKKC 102 (696)
T ss_dssp EEEEECSSCTTSEEE
T ss_pred ccccccCCcccccee
Confidence 569999999985
No 62
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.47 E-value=4.4e-14 Score=123.52 Aligned_cols=110 Identities=18% Similarity=0.291 Sum_probs=84.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccC-----CCCc--c---
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS-----SSSL--P--- 325 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~-----~~~~--~--- 325 (384)
+|+++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.+||++++....... .... .
T Consensus 23 iM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~g---~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 4esy_A 23 ILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ---NG---HLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVE 96 (170)
T ss_dssp GCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT---TS---CEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHH
T ss_pred hcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC---Cc---cEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHH
Confidence 69999999999999999999999999999999983 46 8999999999998654321100 0000 0
Q ss_pred ccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 326 ILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 326 ~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+......+ .++++|+++++++++++++.+|+++|.+++++++||+
T Consensus 97 ~~~~~~~~~-------~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVv 142 (170)
T 4esy_A 97 HLFETGRKL-------TASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVV 142 (170)
T ss_dssp HHHHHHTTC-------BHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEE
T ss_pred hhhcccccc-------chhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEE
Confidence 000001111 2345677999999999999999999999999999997
No 63
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.44 E-value=2.1e-14 Score=151.10 Aligned_cols=155 Identities=11% Similarity=0.120 Sum_probs=104.4
Q ss_pred hhccccccCCCCCcEEEEecCccHHHHHHHHH-HcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccC-CCCCCh-h--
Q 016691 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLY-EQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTN-GSNLTE-E-- 227 (384)
Q Consensus 153 ~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~-~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~-~~~~~~-~-- 227 (384)
...++.|+|....+++++++++++.+|.+.|. +++++++||+|+ +++++|+||.+|+++.+...... ...... +
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 56789999953368889999999999999999 799999999996 68999999999998755321100 000000 0
Q ss_pred -hhhhhhHH-HHHHHHHh--------hccc-----cccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCC
Q 016691 228 -ELETHTIS-AWKVGKLQ--------LNLK-----RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTG 292 (384)
Q Consensus 228 -~l~~~~i~-~~~~~~~~--------~~~~-----~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~ 292 (384)
.++...+. ..+..... ..++ ...+...++|+++++++++++++.+|+++|.+++++++||+|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--- 606 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--- 606 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE---
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE---
Confidence 00000000 00000000 0000 000112247999999999999999999999999999999996
Q ss_pred CCCCcccEEEEeeHHHHHHHHHh
Q 016691 293 PAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 293 ~~g~~~~lvGiit~~dil~~l~~ 315 (384)
+| +++||||.+||++++.+
T Consensus 607 -~G---~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 607 -RG---KLVGIVEREDVAYGYSN 625 (632)
T ss_dssp -TT---EEEEEEEGGGTEECCCC
T ss_pred -CC---EEEEEEehhhHHHHHhh
Confidence 26 89999999999887554
No 64
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.42 E-value=8.4e-12 Score=127.89 Aligned_cols=129 Identities=16% Similarity=0.199 Sum_probs=102.0
Q ss_pred HHHHHHHHhhhhccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCC-CCeEEEEeehHHHHHHHHHhccCC
Q 016691 143 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF-KGRFVGVLSALDFILILRELGTNG 221 (384)
Q Consensus 143 ~~~~~~~~~l~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~-~~~~vGilT~~Dli~~l~~~~~~~ 221 (384)
.+...+++.+. ..+.| ...++++++++|+.+|.++|.+++++.+||+|+. .++++|+||.+||.. ...
T Consensus 104 ~q~~~V~~V~~---~~~~m--~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~-----~~~- 172 (511)
T 3usb_A 104 QQAEQVDKVKR---SESGV--ISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF-----IQD- 172 (511)
T ss_dssp HHHHHHHHHHT---SSSCS--SSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT-----CCC-
T ss_pred HHHHHHHHhhc---ccccc--ccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh-----hcc-
Confidence 33445566554 44566 4467899999999999999999999999999941 589999999999842 111
Q ss_pred CCCChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCC-CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccE
Q 016691 222 SNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPR-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEI 300 (384)
Q Consensus 222 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~-~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~l 300 (384)
.. . .+.+ +|++ +++++++++++.+|+++|.+++++.+||+|. +| ++
T Consensus 173 ~~--------~---~V~~----------------vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe---~g---~l 219 (511)
T 3usb_A 173 YS--------I---KISD----------------VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN---NG---VL 219 (511)
T ss_dssp SS--------S---BHHH----------------HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT---TS---BE
T ss_pred CC--------C---cHHH----------------hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC---CC---CE
Confidence 00 0 1122 2666 8999999999999999999999999999983 46 89
Q ss_pred EEEeeHHHHHHHHHh
Q 016691 301 LYLASLSDILKCICR 315 (384)
Q Consensus 301 vGiit~~dil~~l~~ 315 (384)
+|+||.+||++.+..
T Consensus 220 ~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 220 QGLITIKDIEKVIEF 234 (511)
T ss_dssp EEEEEHHHHHHHHHC
T ss_pred eeeccHHHHHHhhhc
Confidence 999999999999864
No 65
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.40 E-value=1.3e-12 Score=132.87 Aligned_cols=128 Identities=17% Similarity=0.302 Sum_probs=105.0
Q ss_pred HHHHHhh--hhccccccCCCCCcEEEEecCccHHHHHHHHHHc-----CCCeeeeeeCCCCeEEEEeehHHHHHHHHHhc
Q 016691 146 DRISSFL--STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ-----GLPMVPLWDDFKGRFVGVLSALDFILILRELG 218 (384)
Q Consensus 146 ~~~~~~l--~~~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~-----~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~ 218 (384)
..+++.+ ...++.++| ..+++++++++++.+|++.|.++ ++..+||+|+ +++++|+||.+|++..
T Consensus 144 ~~i~~~l~~~~~~v~~iM--~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~-~~~lvGiVt~~Dll~~----- 215 (473)
T 2zy9_A 144 AEVEALARYEEDEAGGLM--TPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVA----- 215 (473)
T ss_dssp HHHHHHHTSCTTBSTTTC--BSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT-TSBEEEEEEHHHHHHS-----
T ss_pred HHHHHHhcCCCCCHHHhC--CCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC-CCcEEEEEEHHHHhcC-----
Confidence 3344444 467889999 56899999999999999999997 5899999996 5899999999999641
Q ss_pred cCCCCCChhhhhhhhHHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcc
Q 016691 219 TNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQ 298 (384)
Q Consensus 219 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~ 298 (384)
.. .. ++ . .+|+++++++++++++.+|+++|.+++++++||+|+ +|
T Consensus 216 -~~-~~--------~v---~----------------dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe---~g--- 260 (473)
T 2zy9_A 216 -DP-RT--------RV---A----------------EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE---EG--- 260 (473)
T ss_dssp -CT-TS--------BG---G----------------GTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT---TS---
T ss_pred -CC-CC--------cH---H----------------HHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC---CC---
Confidence 10 00 00 1 147788999999999999999999999999999983 46
Q ss_pred cEEEEeeHHHHHHHHHhh
Q 016691 299 EILYLASLSDILKCICRH 316 (384)
Q Consensus 299 ~lvGiit~~dil~~l~~~ 316 (384)
+++|+||..|+++.+...
T Consensus 261 ~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 261 RLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp BEEEEEEHHHHHHHHHHH
T ss_pred EEEEEEehHhhHHHHHHH
Confidence 899999999999998754
No 66
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.40 E-value=1.2e-13 Score=141.39 Aligned_cols=163 Identities=15% Similarity=0.148 Sum_probs=24.2
Q ss_pred hhhcccccc-CCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCC--CCeEEEEeehHHHHHHHHHhccCCCCCChhh
Q 016691 152 LSTHTVYEL-LPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF--KGRFVGVLSALDFILILRELGTNGSNLTEEE 228 (384)
Q Consensus 152 l~~~~~~dv-mp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~--~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~ 228 (384)
+.....+++ | ..+++++++++|+.+|+++|.+++++.+||+|++ .++++|+||.+|++.. . .. . +
T Consensus 93 v~~V~~~e~gM--~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~--~~---~---~ 160 (503)
T 1me8_A 93 VHAVKNFKAGF--VVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L--TQ---T---E 160 (503)
T ss_dssp HHHHHTTTC-----------------------------------------------------------------------
T ss_pred HhhhhhcccCc--ccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h--cc---c---c
Confidence 344556677 7 4488999999999999999999999999999952 2799999999999642 0 00 0 0
Q ss_pred hhhhhHHHHHHHHHhhccccccCCCCCCCCCC--ceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeH
Q 016691 229 LETHTISAWKVGKLQLNLKRQMDGNGRPCPRP--LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASL 306 (384)
Q Consensus 229 l~~~~i~~~~~~~~~~~~~~~~~~~~~~m~~~--~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~ 306 (384)
..+.+ +|+++ ++++++++++.+|+++|.+++++++||+|+ +| +++||||.
T Consensus 161 ------~~V~d----------------iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe---~g---~lvGiIT~ 212 (503)
T 1me8_A 161 ------TKVSD----------------MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD---DQ---HLRYIVFR 212 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------CcHHH----------------HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEe
Confidence 00111 36666 899999999999999999999999999983 46 89999999
Q ss_pred HHHHHHHHhhcccCCCCccccccccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeee
Q 016691 307 SDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQ 377 (384)
Q Consensus 307 ~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV 377 (384)
+||++.+...... ..+ .+.++ .-..+.. ....+.++.|.+.++..+.|
T Consensus 213 ~Dil~~~~~~~~~--------~d~-----~~~l~---------v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 213 KDYDRSQVCHNEL--------VDS-----QKRYL---------VGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp ---------CCCC--------BCT-----TSCBC---------CEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cHHHHhhhcccch--------hcc-----ccccc---------cccccCc-hhHHHHHHHHHhhhccceEE
Confidence 9999988643210 111 11211 1123444 56667788888888877665
No 67
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.35 E-value=2.6e-12 Score=112.53 Aligned_cols=95 Identities=9% Similarity=0.001 Sum_probs=80.6
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|+ ++++++++++++.+|+.+|.+++++++||+|+ +.| +++|+||.+|+++++.... +.
T Consensus 47 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~---- 107 (172)
T 3lhh_A 47 LMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------RL---- 107 (172)
T ss_dssp TSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------CC----
T ss_pred hCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------cc----
Confidence 687 78999999999999999999999999999983 215 8999999999999876421 11
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ +| ++++++.+++++.+|+++|.+++++.+||+
T Consensus 108 -~v~~-------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVv 143 (172)
T 3lhh_A 108 -ELVD-------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVV 143 (172)
T ss_dssp -CGGG-------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEE
T ss_pred -cHHH-------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 2233 34 588999999999999999999999999997
No 68
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.33 E-value=3.9e-12 Score=108.12 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=80.8
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|++ +++++++++++.+|+.+|.+++++++||+|+ +.| +++|+||.+|+++++.... +.
T Consensus 28 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~---- 88 (148)
T 3lv9_A 28 IMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KI---- 88 (148)
T ss_dssp TSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CC----
T ss_pred ccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------Cc----
Confidence 5776 8999999999999999999999999999983 215 8999999999999886542 11
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ +| ++++++.+++++.+|+++|.+++++++||+
T Consensus 89 -~v~~-------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv 124 (148)
T 3lv9_A 89 -ELEE-------IL-RDIIYISENLTIDKALERIRKEKLQLAIVV 124 (148)
T ss_dssp -CGGG-------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred -cHHH-------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEE
Confidence 2223 34 588999999999999999999999999997
No 69
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.31 E-value=4.1e-12 Score=108.24 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=81.9
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|++ +++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++.... ...+.
T Consensus 33 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~---- 95 (149)
T 3k2v_A 33 IMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD---DM---NIIGIFTDGDLRRVFDTGV-------DMRDA---- 95 (149)
T ss_dssp TSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT---TC---BEEEEEEHHHHHHHHCSSS-------CCTTC----
T ss_pred HhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---cEEEEecHHHHHHHHhcCC-------CcccC----
Confidence 5788 8999999999999999999999999999983 36 8999999999999875421 11222
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++++ |.++++++++++++.+|+++|.+++++++||+
T Consensus 96 -~v~~~-------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 132 (149)
T 3k2v_A 96 -SIADV-------MTRGGIRIRPGTLAVDALNLMQSRHITCVLVA 132 (149)
T ss_dssp -BHHHH-------SEESCCEECTTCBHHHHHHHHHHHTCSEEEEE
T ss_pred -cHHHH-------cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEe
Confidence 23333 34688999999999999999999999999997
No 70
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.31 E-value=5.7e-12 Score=108.87 Aligned_cols=105 Identities=13% Similarity=0.129 Sum_probs=83.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCC-ccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS-LPILQQPVSSI 334 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~-~~~~~~~v~~l 334 (384)
+|+++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++...+...... ..... .
T Consensus 10 im~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~-----~ 78 (160)
T 2o16_A 10 MMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA---NK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFE-----T 78 (160)
T ss_dssp TSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHHHCC---------CC-----C
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHHhhcccccccchhcc-----c
Confidence 57888999999999999999999999999999983 36 8999999999999987654321000 00111 1
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+ +.++|.++++++++++++.+|+++|.+++++++||+
T Consensus 79 ~-------v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 115 (160)
T 2o16_A 79 P-------LFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVV 115 (160)
T ss_dssp B-------HHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEE
T ss_pred C-------HHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEE
Confidence 2 334456799999999999999999999999999997
No 71
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.30 E-value=4.3e-12 Score=103.85 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=80.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.+|+++++..... +
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~----------------~ 63 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE---HG---KLVGIITSWDIAKALAQNKK----------------T 63 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT---TS---BEEEEECHHHHHHHHHTTCC----------------B
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---CEEEEEEHHHHHHHHHhccc----------------C
Confidence 37888999999999999999999999999999983 46 89999999999998864210 2
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ |.+++.++.+++++.+|+++|.+++++++||+
T Consensus 64 v~~~-------~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv 99 (122)
T 3kpb_A 64 IEEI-------MTRNVITAHEDEPVDHVAIKMSKYNISGVPVV 99 (122)
T ss_dssp GGGT-------SBSSCCCEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred HHHH-------hcCCCeEECCCCCHHHHHHHHHHhCCCeEEEE
Confidence 2333 34688999999999999999999999999997
No 72
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.30 E-value=3.9e-12 Score=105.81 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=79.8
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|+ .+++++++++++.+|+++|.+++++++||+|+ +.| +++|+||.+|+++++..... +
T Consensus 11 iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~~---------~----- 71 (130)
T 3i8n_A 11 VMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGSG---------Q----- 71 (130)
T ss_dssp TSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTTT---------T-----
T ss_pred CCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCCC---------c-----
Confidence 566 56789999999999999999999999999983 225 89999999999999864321 1
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+++++| ++++++.+++++.+|+++|.+++++.+||+
T Consensus 72 ~~v~~~m--------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv 108 (130)
T 3i8n_A 72 KQLGAVM--------RPIQVVLNNTALPKVFDQMMTHRLQLALVV 108 (130)
T ss_dssp SBHHHHS--------EECCEEETTSCHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHh--------cCCcCcCCCCcHHHHHHHHHHcCCeEEEEE
Confidence 2333443 367899999999999999999999999997
No 73
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.30 E-value=1.6e-11 Score=125.27 Aligned_cols=118 Identities=19% Similarity=0.239 Sum_probs=98.0
Q ss_pred ccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeC-CCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 157 VYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDD-FKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 157 ~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~-~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
+.++| ..+++++++++++.+|+++|.++++..+||+|. +.++++|+||.+|++.. ... .. ++
T Consensus 92 ~~~im--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~-----~~~-~~--------~v- 154 (491)
T 1zfj_A 92 SENGV--IIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI-----SDY-NA--------PI- 154 (491)
T ss_dssp HTTTT--SSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC-----SCS-SS--------BT-
T ss_pred HHhcC--cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh-----ccC-CC--------cH-
Confidence 36788 457889999999999999999999999999982 26899999999998632 010 00 00
Q ss_pred HHHHHHHhhccccccCCCCCCCCC-CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHH
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCPR-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~~-~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~ 314 (384)
..+|++ +++++++++++.+++++|.+++++++||+|. +| +++|+||..||++.+.
T Consensus 155 ------------------~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~---~g---~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 155 ------------------SEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN---SG---RLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------------------TTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT---TS---BEEEEEEHHHHHHHHH
T ss_pred ------------------HHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEEHHHHHHHHh
Confidence 114777 8999999999999999999999999999983 46 8999999999999987
Q ss_pred h
Q 016691 315 R 315 (384)
Q Consensus 315 ~ 315 (384)
.
T Consensus 211 ~ 211 (491)
T 1zfj_A 211 F 211 (491)
T ss_dssp C
T ss_pred c
Confidence 4
No 74
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.29 E-value=3.8e-12 Score=110.10 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=78.7
Q ss_pred CCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccccc
Q 016691 258 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 337 (384)
Q Consensus 258 ~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig 337 (384)
..+++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++...... .....+.+
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~---~lvGiit~~Di~~~~~~~~~~--------~~~~~~~~-- 87 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLS--------QEIMADTD-- 87 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCC--------HHHHTTSB--
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEecchhhhhhhcccc--------cccccccC--
Confidence 468999999999999999999999999999983 36 899999999999998764311 01111222
Q ss_pred ccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 338 TWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 338 ~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++|.++++++++++++.+|+++|.++++ +||+
T Consensus 88 -----v~~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVV 121 (156)
T 3k6e_A 88 -----IVHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVV 121 (156)
T ss_dssp -----GGGTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEE
T ss_pred -----HHHhhcCCceecccccHHHHHHHHHHHcCC--eEEE
Confidence 334456899999999999999999998876 8886
No 75
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.28 E-value=1.3e-11 Score=101.29 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=81.2
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.++++++.+++++.+|+++|.+++++++||+|+ | +++|+||.+|+++++..... ..+. +
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~G~it~~dl~~~~~~~~~-------~~~~-----~ 66 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKE----G---VRVGIVTTWDVLEAIAEGDD-------LAEV-----K 66 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEET----T---EEEEEEEHHHHHHHHHHTCC-------TTTS-----B
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeC----C---eeEEEEeHHHHHHHHhcCCc-------cccc-----C
Confidence 36788999999999999999999999999999972 6 89999999999988765321 1122 2
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ |.+++.++.+++++.+|+++|.+++++++||+
T Consensus 67 v~~~-------m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv 102 (125)
T 1pbj_A 67 VWEV-------MERDLVTISPRATIKEAAEKMVKNVVWRLLVE 102 (125)
T ss_dssp HHHH-------CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEE
T ss_pred HHHH-------cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEE
Confidence 3333 34688999999999999999999999999996
No 76
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.27 E-value=7.9e-12 Score=107.75 Aligned_cols=97 Identities=11% Similarity=0.086 Sum_probs=79.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|+++ +++.+++++.+|+.+|.+++++++||+|. +| +++|+||.+|+++++.... ..... +
T Consensus 22 im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~-----~ 82 (159)
T 3fv6_A 22 FQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDR---DA---VLVGVLSRKDLLRASIGQQ-------ELTSV-----P 82 (159)
T ss_dssp SCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHTSCS-------CTTTC-----B
T ss_pred HcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---cEEEEEeHHHHHHHhhccC-------cccCc-----C
Confidence 57775 59999999999999999999999999983 36 8999999999999875321 11122 2
Q ss_pred ccccccccccCCCC--CceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~--~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ |.+ +++++.+++++.+|+++|.+++++++||+
T Consensus 83 v~~~-------m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 120 (159)
T 3fv6_A 83 VHII-------MTRMPNITVCRREDYVMDIAKHLIEKQIDALPVI 120 (159)
T ss_dssp GGGT-------SEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred HHHH-------HcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 3333 345 78999999999999999999999999997
No 77
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=1.7e-11 Score=106.28 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=80.5
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccccc
Q 016691 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (384)
Q Consensus 259 ~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~ 338 (384)
++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++...... .... +++
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~------~~~~-----~v~- 96 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DG---VVLGIFTERDLVKAVAGQGAA------SLQQ-----SVS- 96 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHHHGGG------GGTS-----BGG-
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEHHHHHHHHHhcCCc------cccC-----CHH-
Confidence 47899999999999999999999999999983 36 899999999999998865311 1122 223
Q ss_pred cccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 339 ~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++|.++++++.+++++.+|+++|.+++++++||+
T Consensus 97 ------~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 130 (165)
T 3fhm_A 97 ------VAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVE 130 (165)
T ss_dssp ------GTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEE
T ss_pred ------HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 3345788999999999999999999999999997
No 78
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.26 E-value=5.9e-12 Score=107.82 Aligned_cols=95 Identities=9% Similarity=0.094 Sum_probs=79.8
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEE-ecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccc
Q 016691 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPII-HSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 332 (384)
Q Consensus 256 ~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVv-d~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~ 332 (384)
+|++ +++++++++++.+|+.+|.+++++++||+ |+ ++| +++|+||.+|+++++.... +
T Consensus 25 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~---- 85 (153)
T 3oco_A 25 VMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------K---- 85 (153)
T ss_dssp HSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------T----
T ss_pred EecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------C----
Confidence 3664 78999999999999999999999999999 52 225 8999999999999987532 1
Q ss_pred cccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 333 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 333 ~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.++++ +| ++++++.+++++.+|+++|.+++++++||+
T Consensus 86 -~~v~~-------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVv 122 (153)
T 3oco_A 86 -AKIST-------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVI 122 (153)
T ss_dssp -SBGGG-------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEE
T ss_pred -CcHHH-------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 12233 34 588999999999999999999999999997
No 79
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.26 E-value=1.4e-11 Score=102.47 Aligned_cols=96 Identities=15% Similarity=0.219 Sum_probs=81.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.++++++.+++++.+|+.+|.+++++++||+|+ | +++|+||.+|+++++..... .+. +
T Consensus 9 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~Givt~~dl~~~~~~~~~--------~~~-----~ 68 (133)
T 2ef7_A 9 YMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDG----N---KPVGIITERDIVKAIGKGKS--------LET-----K 68 (133)
T ss_dssp TSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHHHHHTTCC--------TTC-----B
T ss_pred hccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEEC----C---EEEEEEcHHHHHHHHhcCCC--------ccc-----C
Confidence 57888999999999999999999999999999972 6 89999999999998765321 112 2
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ |.+++.++++++++.+|+++|.+++++++||+
T Consensus 69 v~~~-------~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv 104 (133)
T 2ef7_A 69 AEEF-------MTASLITIREDSPITGALALMRQFNIRHLPVV 104 (133)
T ss_dssp GGGT-------SEECCCCEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred HHHH-------cCCCCEEECCCCCHHHHHHHHHHcCCCEEEEE
Confidence 3333 34688999999999999999999999999997
No 80
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.26 E-value=3.2e-12 Score=107.45 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=78.5
Q ss_pred CC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccc
Q 016691 257 CP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 257 m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
|+ ++++++.+++++.+|+.+|.+++++++||+|+ +.| +++|+||.+|+++++.... ..+ .
T Consensus 9 M~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~-----~ 70 (136)
T 3lfr_A 9 MVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDS-----D 70 (136)
T ss_dssp SEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGG-----C
T ss_pred cccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCC-----c
Confidence 55 67899999999999999999999999999984 225 8999999999998864211 011 2
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++++| ++++++.+++++.+|+++|.+++++.+||+
T Consensus 71 ~v~~~m--------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv 106 (136)
T 3lfr_A 71 DVKKLL--------RPATFVPESKRLNVLLREFRANHNHMAIVI 106 (136)
T ss_dssp CGGGTC--------BCCCEEETTCBHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHc--------CCCeEECCCCcHHHHHHHHHhcCCeEEEEE
Confidence 334444 258999999999999999999999999997
No 81
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.26 E-value=1.1e-11 Score=106.64 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=78.9
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|++ +++++++++++.+|+.+|.+++++++||+|+ +.+ +++|+||.+|+++++... .+
T Consensus 43 iM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~----- 102 (156)
T 3oi8_A 43 AMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQ----- 102 (156)
T ss_dssp TCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GG-----
T ss_pred eeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------Cc-----
Confidence 5765 7899999999999999999999999999984 324 799999999999875321 11
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+++++| ++++++.+++++.+|+++|.+++++.+||+
T Consensus 103 ~~v~~im--------~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vv 139 (156)
T 3oi8_A 103 FHLKSIL--------RPAVFVPEGKSLTALLKEFREQRNHMAIVI 139 (156)
T ss_dssp CCHHHHC--------BCCCEEETTSBHHHHHHHHHHTTCCEEEEE
T ss_pred ccHHHHc--------CCCEEECCCCCHHHHHHHHHhcCCeEEEEE
Confidence 2334444 257899999999999999999999999997
No 82
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.26 E-value=2.8e-12 Score=106.27 Aligned_cols=95 Identities=11% Similarity=0.102 Sum_probs=77.6
Q ss_pred CC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccc
Q 016691 257 CP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 257 m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
|+ ++++++++++++.+|+++|.+++++++||+|+ +.| +++|+||.+|+++++.... .+ .
T Consensus 9 M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~-----~ 69 (127)
T 3nqr_A 9 MIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EA-----F 69 (127)
T ss_dssp SEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CC-----C
T ss_pred cccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CC-----C
Confidence 56 34899999999999999999999999999983 225 8999999999998764321 11 2
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++++| ++++++.+++++.+|+++|.+++++++||+
T Consensus 70 ~v~~~m--------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 105 (127)
T 3nqr_A 70 SMDKVL--------RTAVVVPESKRVDRMLKEFRSQRYHMAIVI 105 (127)
T ss_dssp CHHHHC--------BCCCEEETTCBHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHc--------CCCeEECCCCcHHHHHHHHHhcCCeEEEEE
Confidence 333443 256899999999999999999999999997
No 83
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.25 E-value=6.7e-12 Score=104.68 Aligned_cols=95 Identities=5% Similarity=0.056 Sum_probs=77.9
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccccc
Q 016691 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (384)
Q Consensus 259 ~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~ 338 (384)
++++++++++++.+|+++|.+++++++||+|+ ++| +++|+||.+|+++++.... .+.. ..+++
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~--~~~---~lvGivt~~dl~~~~~~~~-------~~~~-----~~v~~ 74 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD--SLD---DAISMLRVREAYRLMTEKK-------EFTK-----EIMLR 74 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESS--SGG---GEEEEEEHHHHHHHHTSSS-------CCCH-----HHHHH
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCC---cEEEEEEHHHHHHHHhccC-------ccch-----hhHHH
Confidence 46899999999999999999999999999963 235 8999999999999875421 0111 22333
Q ss_pred cccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 339 ~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+| ++++++.+++++.+|+++|.+++++.+||+
T Consensus 75 ~m--------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv 106 (130)
T 3hf7_A 75 AA--------DEIYFVPEGTPLSTQLVKFQRNKKKVGLVV 106 (130)
T ss_dssp HS--------BCCCEEETTCBHHHHHHHHHHHCCCEEEEE
T ss_pred hc--------cCCeEeCCCCcHHHHHHHHHhcCCeEEEEE
Confidence 33 478899999999999999999999999996
No 84
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.24 E-value=3.2e-11 Score=101.44 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=80.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCC-CCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPA-GSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~-g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
+|+++++++.+++++.+|+++|.+++++++||+|+ ++ . +++|+||.+|+++++..... .+ .
T Consensus 10 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~---~~~Givt~~dl~~~~~~~~~--------~~-----~ 71 (141)
T 2rih_A 10 LLKRPPVSLPETATIREVATELAKNRVGLAVLTAR--DNPK---RPVAVVSERDILRAVAQRLD--------LD-----G 71 (141)
T ss_dssp GCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET--TEEE---EEEEEEEHHHHHHHHHTTCC--------TT-----S
T ss_pred HhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC--CCcc---eeEEEEEHHHHHHHHhcCCC--------CC-----C
Confidence 57889999999999999999999999999999984 21 1 59999999999998764321 11 2
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++++ |.++++++.++ ++.+|+++|.+++++++||+
T Consensus 72 ~v~~~-------m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vv 107 (141)
T 2rih_A 72 PAMPI-------ANSPITVLDTD-PVHVAAEKMRRHNIRHVVVV 107 (141)
T ss_dssp BSGGG-------CBCCCEEETTS-BHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHH-------cCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEE
Confidence 23333 45789999999 99999999999999999997
No 85
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.24 E-value=1.2e-11 Score=114.28 Aligned_cols=54 Identities=17% Similarity=0.149 Sum_probs=50.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHh
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~ 315 (384)
+|+++++++.+++++.+|+.+|.+++++++||+|+ +| +++||||..|+++++..
T Consensus 12 im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 12 LEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG---NN---HLLGMLSTSNITATYMD 65 (245)
T ss_dssp SCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHHC
T ss_pred hcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHH
Confidence 68899999999999999999999999999999983 36 89999999999999864
No 86
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.24 E-value=5e-12 Score=104.77 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=80.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.+++.++.+++++.+|+++|.+++++++||+| + | +++|+||.+|+++++..... . +.+
T Consensus 10 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~-~---~~~Givt~~dl~~~~~~~~~--------~-----~~~ 69 (128)
T 3gby_A 10 LAETDYPVFTLGGSTADAARRLAASGCACAPVLD---G-E---RYLGMVHLSRLLEGRKGWPT--------V-----KEK 69 (128)
T ss_dssp GCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHTTCSSSCC--------T-----TCB
T ss_pred hhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE---C-C---EEEEEEEHHHHHHHHhhCCc--------c-----cCc
Confidence 5788899999999999999999999999999998 3 6 89999999999976532110 0 122
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++ +|.+++.++.+++++.+|+++|.+++++++||+
T Consensus 70 v~~-------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVv 105 (128)
T 3gby_A 70 LGE-------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLA 105 (128)
T ss_dssp CCG-------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEE
T ss_pred HHH-------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEE
Confidence 333 345788999999999999999999999999997
No 87
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.23 E-value=2.8e-11 Score=106.85 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=82.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|+++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.+||++++...... .. +.+
T Consensus 14 im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~~------~~-----~~~ 76 (184)
T 1pvm_A 14 IMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNKK------PD-----EVP 76 (184)
T ss_dssp TSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCCC------GG-----GSB
T ss_pred hcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhcccC------cc-----cCC
Confidence 57889999999999999999999999999999973 36 899999999999987642100 11 122
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++ +|.++++++.+++++.+|+++|.+++++.+||+
T Consensus 77 v~~-------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 112 (184)
T 1pvm_A 77 IRL-------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVV 112 (184)
T ss_dssp GGG-------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEE
T ss_pred HHH-------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 333 445789999999999999999999999999997
No 88
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.22 E-value=1.7e-11 Score=102.24 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=78.2
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccccc
Q 016691 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (384)
Q Consensus 259 ~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~ 338 (384)
++++++++++++.+|+.+|.+++++++||+|+ | +++|+||.+|+++.+..+.. ...+ .++
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~Givt~~dl~~~~~~~~~------~~~~-----~~v-- 76 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMKD----E---KLVGILTERDFSRKSYLLDK------PVKD-----TQV-- 76 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHHHGGGSSS------CGGG-----SBG--
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEEC----C---EEEEEEehHHHHHHHHHcCC------Cccc-----CCH--
Confidence 78899999999999999999999999999972 6 89999999999976543210 0111 222
Q ss_pred cccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 339 ~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++|.+++.++++++++.+|+++|.+++++++||+
T Consensus 77 -----~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVv 111 (135)
T 2rc3_A 77 -----KEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVL 111 (135)
T ss_dssp -----GGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE
T ss_pred -----HHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEE
Confidence 33445789999999999999999999999999997
No 89
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.22 E-value=5.1e-11 Score=102.30 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=81.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCe-eeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccc---ccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVAT-VPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQ---QPV 331 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~-lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~---~~v 331 (384)
+|+++++++.+++++.+|+++|.++++++ +||+|+ + +++|+||.+|+++++...+.........+. ...
T Consensus 21 im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (157)
T 1o50_A 21 LISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRL 93 (157)
T ss_dssp SSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCC
T ss_pred cccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHH
Confidence 58899999999999999999999999999 999983 3 699999999999987643100000000000 001
Q ss_pred ccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 332 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 332 ~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+.+ ++++|.+ ++++++++++.+|+++|.+++++++||+
T Consensus 94 ~~~~-------v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVv 132 (157)
T 1o50_A 94 IAKN-------ASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVV 132 (157)
T ss_dssp SSCB-------HHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred cCCc-------HHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEE
Confidence 1122 3445567 8999999999999999999999999997
No 90
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.22 E-value=2.2e-11 Score=102.23 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=78.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++..... ...+.+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~----- 78 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLS----- 78 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSB-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCcc-----
Confidence 47789999999999999999999999999999983 36 89999999999998764210 111223
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++|.+-. .-.++++++.+++++.+|+++|.+++++++||+
T Consensus 79 v~~~m~~~~-~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv 120 (144)
T 2nyc_A 79 VGEALMRRS-DDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVV 120 (144)
T ss_dssp HHHHHHHCC-------CEECTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhcCc-cccCCCeEECCCCcHHHHHHHHHHCCCCEEEEE
Confidence 333331000 000168999999999999999999999999997
No 91
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.22 E-value=9.5e-12 Score=103.44 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=77.5
Q ss_pred CC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccc
Q 016691 257 CP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 257 m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
|+ .+++++++++++.+|+.+|.+++++++||+|+ +.| +++|+||.+|+++++... + .
T Consensus 11 M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~-----------~-----~ 69 (129)
T 3jtf_A 11 MVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLEP-----------A-----L 69 (129)
T ss_dssp CEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTCT-----------T-----S
T ss_pred CccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhccC-----------C-----c
Confidence 55 67899999999999999999999999999983 225 899999999999875310 1 2
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.++++| ++++++.+++++.+|+++|.+++++.+||+
T Consensus 70 ~v~~~m--------~~~~~v~~~~~l~~~~~~m~~~~~~~~pVv 105 (129)
T 3jtf_A 70 DIRSLV--------RPAVFIPEVKRLNVLLREFRASRNHLAIVI 105 (129)
T ss_dssp CGGGGC--------BCCCEEETTCBHHHHHHHHHTSSCCEEEEE
T ss_pred CHHHHh--------CCCeEeCCCCcHHHHHHHHHhcCCeEEEEE
Confidence 233444 257899999999999999999999999997
No 92
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.21 E-value=9.1e-12 Score=127.20 Aligned_cols=117 Identities=11% Similarity=0.148 Sum_probs=82.4
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
+..++|. .+++++++++++.+|.++|.+++++.+||+|+ .++++|+||.+||.. ... ... .+
T Consensus 90 ~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-~~~lvGiVt~rDL~~-----~~~-~~~--------~v- 151 (496)
T 4fxs_A 90 IFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTE-NNELVGIITGRDVRF-----VTD-LTK--------SV- 151 (496)
T ss_dssp HCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-SSBEEEEEEHHHHTT-----CCC-TTS--------BG-
T ss_pred ccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEcc-CCEEEEEEEHHHHhh-----ccc-CCC--------cH-
Confidence 4567783 57889999999999999999999999999996 689999999999841 110 000 01
Q ss_pred HHHHHHHhhccccccCCCCCCCC-C-CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCP-R-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~-~-~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
. ++|+ + +++++++++++.+|+++|.+++++++||+|+ +| +|+|+||..||++..
T Consensus 152 --~----------------diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe---~G---~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 152 --A----------------AVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND---EF---QLKGMITAKDFHKAE 207 (496)
T ss_dssp --G----------------GTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT---TS---BCCEEECCC-----C
T ss_pred --H----------------HHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---CEEEeehHhHHHHhh
Confidence 1 1366 3 5899999999999999999999999999983 47 899999999999975
Q ss_pred H
Q 016691 314 C 314 (384)
Q Consensus 314 ~ 314 (384)
.
T Consensus 208 ~ 208 (496)
T 4fxs_A 208 S 208 (496)
T ss_dssp C
T ss_pred c
Confidence 3
No 93
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.21 E-value=4.7e-11 Score=99.83 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=78.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|+++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++.+..... ... .+
T Consensus 12 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~-----~~ 73 (138)
T 2yzi_A 12 YMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPGL-------PYD-----IP 73 (138)
T ss_dssp TCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCC-------CTT-----SB
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcCC-------ccc-----CC
Confidence 57889999999999999999999999999999983 36 89999999999854332110 111 12
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++ ++|.++++++++++++.+|+++|.+++++++ |+
T Consensus 74 v~-------~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vv 108 (138)
T 2yzi_A 74 VE-------RIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LI 108 (138)
T ss_dssp GG-------GTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EE
T ss_pred HH-------HHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EE
Confidence 33 3345789999999999999999999999999 76
No 94
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.20 E-value=1.7e-11 Score=105.34 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|+++++++.+++++.+|+++|.+++++++||+|+ .++| +++|+||..|+++++....... ......++.++.
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~-~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~~v~~~m 90 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES-TESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQCLQDIL 90 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHC----------CCCCBHHHHH
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec-CCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccchhhhhh
Confidence 36788999999999999999999999999999983 1136 8999999999999886432110 111122233222
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
..... ....++++.+++++.+|+++|.+++++++||+
T Consensus 91 ~~~~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVv 127 (164)
T 2pfi_A 91 ARGCP------TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVT 127 (164)
T ss_dssp HTTCC------CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEE
T ss_pred ccccc------ccCCceEECCCCcHHHHHHHHHHhCCCEEEEE
Confidence 11100 00117899999999999999999999999997
No 95
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.20 E-value=5.8e-12 Score=106.68 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=79.2
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|++ +++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++..... ...+.. ...
T Consensus 10 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~-----~~~~~~-~~~ 77 (152)
T 4gqw_A 10 FMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE---DW---KLVGLVSDYDLLALDSGDST-----WKTFNA-VQK 77 (152)
T ss_dssp TSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHTTCC----C-----CHHHHH-HHT
T ss_pred ccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC---CC---eEEEEEEHHHHHHhhcccCc-----ccchHH-HHH
Confidence 4666 7999999999999999999999999999983 36 89999999999876442210 000000 000
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+........++++|.++++++.+++++.+|+++|.+++++++||+
T Consensus 78 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vv 122 (152)
T 4gqw_A 78 LLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVV 122 (152)
T ss_dssp C-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEE
T ss_pred HHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEE
Confidence 000000012334445688999999999999999999999999997
No 96
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.20 E-value=2.5e-11 Score=103.12 Aligned_cols=100 Identities=12% Similarity=0.166 Sum_probs=78.6
Q ss_pred CC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccc
Q 016691 257 CP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 257 m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
|+ ++++++.+++++.+|+.+|.+++++++||+|. +| +++|+||.+|+++++...... . .......
T Consensus 21 m~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~-----~--~~~~~~~ 87 (150)
T 3lqn_A 21 MISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP---MY---KLHGLISTAMILDGILGLERI-----E--FERLEEM 87 (150)
T ss_dssp SEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHTBCSSSB-----C--GGGGGGC
T ss_pred ccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC---CC---CEEEEEEHHHHHHHHHhhccc-----c--hhHHhcC
Confidence 55 56899999999999999999999999999983 36 899999999999987532110 0 0000112
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+ ++++|.++++++.+++++.+|+++|.++++ +||+
T Consensus 88 ~-------v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vv 122 (150)
T 3lqn_A 88 K-------VEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAV 122 (150)
T ss_dssp B-------GGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEE
T ss_pred C-------HHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEE
Confidence 2 334456789999999999999999999997 8886
No 97
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.19 E-value=1.2e-11 Score=102.83 Aligned_cols=97 Identities=11% Similarity=0.135 Sum_probs=79.2
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH-HHHhhcccCCCCcccccccccccc
Q 016691 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 257 m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~-~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
|+++++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.+|+++ ++..... ..+ .+
T Consensus 14 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~-------~~~-----~~ 75 (133)
T 1y5h_A 14 MNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD-------PNT-----AT 75 (133)
T ss_dssp SEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC-------TTT-----SB
T ss_pred hcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC-------ccc-----cC
Confidence 6778899999999999999999999999999973 36 8999999999994 5443211 111 23
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ |.++++++++++++.+|+++|.+++++++||+
T Consensus 76 v~~~-------m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv 111 (133)
T 1y5h_A 76 AGEL-------ARDSIYYVDANASIQEMLNVMEEHQVRRVPVI 111 (133)
T ss_dssp HHHH-------HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEE
T ss_pred HHHH-------hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEE
Confidence 3333 34688999999999999999999999999997
No 98
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.18 E-value=3.4e-11 Score=103.15 Aligned_cols=95 Identities=8% Similarity=0.134 Sum_probs=79.1
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccccc
Q 016691 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (384)
Q Consensus 259 ~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~ 338 (384)
++++++.+++++.+|+++|.+++++++||.| +| +++|+||.+|+++++..+... ..+. ++++
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~~~~-----~v~~ 82 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------SKAT-----RVEE 82 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------SSSC-----BHHH
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------cccc-----CHHH
Confidence 6789999999999999999999999999964 36 899999999999988654321 1122 2333
Q ss_pred cccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 339 ~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+ |.++++++.+++++.+|+++|.+++++++||+
T Consensus 83 ~-------m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVv 115 (157)
T 4fry_A 83 I-------MTAKVRYVEPSQSTDECMALMTEHRMRHLPVL 115 (157)
T ss_dssp H-------SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred H-------cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 3 45688999999999999999999999999997
No 99
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.18 E-value=7.6e-11 Score=110.01 Aligned_cols=58 Identities=10% Similarity=0.137 Sum_probs=51.6
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhh
Q 016691 255 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRH 316 (384)
Q Consensus 255 ~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~ 316 (384)
++|+++++++.+++++.+|+++|.+++++++||+|+ .++| +|+||||.+||++++...
T Consensus 17 diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 17 DIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHH
T ss_pred HhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHh
Confidence 379999999999999999999999999999999984 2235 799999999999988754
No 100
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.18 E-value=2.8e-11 Score=101.11 Aligned_cols=97 Identities=15% Similarity=0.287 Sum_probs=79.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHH-HHHHHhhcccCCCCccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI-LKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~di-l~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
+|+++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+ ++++.... ..+.
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~~----- 73 (138)
T 2p9m_A 13 VMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLET----- 73 (138)
T ss_dssp TSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSSC-----
T ss_pred hhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCCc-----
Confidence 57888999999999999999999999999999983 36 89999999999 88764311 1122
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCC-----Cceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGD-----LTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~-----is~lPV~ 378 (384)
++++ +|.+++.++.+++++.+|+++|.+++ ++++||+
T Consensus 74 ~v~~-------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vv 115 (138)
T 2p9m_A 74 TIGD-------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVV 115 (138)
T ss_dssp BHHH-------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEE
T ss_pred CHHH-------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEE
Confidence 2233 34568899999999999999999999 9999997
No 101
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.18 E-value=1.5e-11 Score=125.39 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=3.0
Q ss_pred ccccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhH
Q 016691 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (384)
Q Consensus 155 ~~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (384)
.++.++| ...++++++++++.+|+++|.+++++.+||+| .++++|+||.+||.... . . + .
T Consensus 88 k~~~~~m--~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd--~g~lvGIVt~rDl~~~~-----~---~---~---~-- 147 (490)
T 4avf_A 88 KKHETAI--VRDPVTVTPSTKIIELLQMAREYGFSGFPVVE--QGELVGIVTGRDLRVKP-----N---A---G---D-- 147 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCc--ccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEhHHhhhcc-----c---c---C---C--
Confidence 3467888 45788999999999999999999999999999 57999999999984210 0 0 0 0
Q ss_pred HHHHHHHHhhccccccCCCCCCCC-C-CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHH
Q 016691 235 SAWKVGKLQLNLKRQMDGNGRPCP-R-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (384)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~m~-~-~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~ 312 (384)
.+.+ +|+ + +++++++++++.+|+++|.+++++.+||+|. +| +++|+||..||++.
T Consensus 148 -~V~~----------------vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe---~g---~lvGiIT~~Dil~~ 204 (490)
T 4avf_A 148 -TVAA----------------IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE---NF---YLRGLVTFRDIEKA 204 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cHHH----------------HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEehHHhhhh
Confidence 0111 366 4 6899999999999999999999999999983 46 89999999999998
Q ss_pred HH
Q 016691 313 IC 314 (384)
Q Consensus 313 l~ 314 (384)
..
T Consensus 205 ~~ 206 (490)
T 4avf_A 205 KT 206 (490)
T ss_dssp --
T ss_pred cc
Confidence 64
No 102
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.17 E-value=9.4e-11 Score=100.05 Aligned_cols=102 Identities=11% Similarity=0.099 Sum_probs=79.8
Q ss_pred CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccccc
Q 016691 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (384)
Q Consensus 259 ~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ig~ 338 (384)
++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++..... ...+.++. +
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~------~~~~~~v~-----~ 91 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTY------NNLDVSVT-----K 91 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSC------CCTTSBGG-----G
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhh------hhhcchHH-----H
Confidence 67889999999999999999999999999983 36 89999999999998764321 01122333 3
Q ss_pred cccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 339 ~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+|. ....|.++++++.+++++.+|+++|.+++++++||+
T Consensus 92 ~m~-~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 130 (152)
T 2uv4_A 92 ALQ-HRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVV 130 (152)
T ss_dssp GGG-TCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred HHh-hhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEE
Confidence 321 001112588999999999999999999999999997
No 103
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.16 E-value=3.4e-12 Score=130.40 Aligned_cols=119 Identities=22% Similarity=0.331 Sum_probs=7.1
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHH
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (384)
++.++| ..+++++.+++++.+|+++|.++++..+||+|+ +++++|+||.+|++.. . . . + .
T Consensus 96 ~~~~iM--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~~-~----~---~---~------~ 155 (494)
T 1vrd_A 96 KTENGI--IYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRFE-K----N---L---S------K 155 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcC--ccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHhh-c----C---C---C------C
Confidence 467888 458899999999999999999999999999995 6899999999998641 0 0 0 0 0
Q ss_pred HHHHHHHhhccccccCCCCCCCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 236 AWKVGKLQLNLKRQMDGNGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
.+.+ +|++ +++++++++++.+|+.+|.+++++++||+|+ +| +++|+||..|+++.+
T Consensus 156 ~v~~----------------im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~---~g---~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 156 KIKD----------------LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK---DN---KLVGLITIKDIMSVI 213 (494)
T ss_dssp ---------------------------------------------------------------------------CHHHH
T ss_pred cHHH----------------HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC---CC---eEEEEEEHHHHHhhh
Confidence 1111 3666 8999999999999999999999999999984 46 899999999999997
Q ss_pred Hhh
Q 016691 314 CRH 316 (384)
Q Consensus 314 ~~~ 316 (384)
...
T Consensus 214 ~~~ 216 (494)
T 1vrd_A 214 EHP 216 (494)
T ss_dssp TCT
T ss_pred ccc
Confidence 643
No 104
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.16 E-value=8.4e-11 Score=103.35 Aligned_cols=94 Identities=7% Similarity=0.071 Sum_probs=79.2
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|+ ++++++.+++++.+|+.+|.++++.++||+|+ +.| +++|+||.+|+++++.... .
T Consensus 41 iM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~----- 100 (173)
T 3ocm_A 41 IMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------R----- 100 (173)
T ss_dssp TSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------S-----
T ss_pred hCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------c-----
Confidence 575 57899999999999999999999999999983 225 8999999999999986531 1
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
..+. .+ ++++++.+++++.+|+++|.+++++.+||+
T Consensus 101 ~~v~-~~--------~~~~~v~~~~~l~~al~~m~~~~~~~~~Vv 136 (173)
T 3ocm_A 101 VRRN-RL--------RDPIIVHESIGILRLMDTLKRSRGQLVLVA 136 (173)
T ss_dssp CCGG-GS--------BCCCEECGGGCHHHHHHHHHHSTTCCEEEE
T ss_pred chhH-hc--------CCCeEECCCCcHHHHHHHHHHcCCeEEEEE
Confidence 1222 22 478999999999999999999999999997
No 105
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.14 E-value=9.8e-11 Score=102.71 Aligned_cols=114 Identities=9% Similarity=0.059 Sum_probs=80.0
Q ss_pred ceEe--CCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCC----Cccccccccccc
Q 016691 261 LVQA--GPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS----SLPILQQPVSSI 334 (384)
Q Consensus 261 ~itv--~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~----~~~~~~~~v~~l 334 (384)
++++ .+++++.+|+.+|.+++++++||++++ ++| +++|+||..|+++++......... ....+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d-~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVSR-ESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESCT-TTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEEC-CCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7888 999999999999999999999999310 246 899999999999998764211000 000000000000
Q ss_pred ccc-ccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLG-TWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig-~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
... .....++++|.++++++.+++++.+|+++|.+++++++||+
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv 145 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVT 145 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEE
Confidence 000 00112445556789999999999999999999999999997
No 106
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.14 E-value=4.4e-11 Score=102.40 Aligned_cols=100 Identities=14% Similarity=0.139 Sum_probs=79.1
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|+ ++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++....... ..+...
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~~---- 86 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADT---- 86 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTS----
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC---CC---EEEEEEcHHHHHHHHHhccccc---cccccC----
Confidence 466 78899999999999999999999999999983 36 8999999999999987632110 001122
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++ ++|.++++++++++++.+|+++|.+++ ++||+
T Consensus 87 -~v~-------~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVv 121 (156)
T 3ctu_A 87 -DIV-------HMTKTDVAVVSPDFTITEVLHKLVDES--FLPVV 121 (156)
T ss_dssp -BGG-------GGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEE
T ss_pred -cHH-------HhccCCceeeCCCCcHHHHHHHHHHcC--eEEEE
Confidence 233 334578899999999999999999997 79987
No 107
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.12 E-value=5.9e-12 Score=127.13 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=0.0
Q ss_pred cEEEEecCccHHHHHHHHHHcCCCeeeeeeCC--CCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHHHHHHHHHh
Q 016691 166 KVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF--KGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQ 243 (384)
Q Consensus 166 ~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~--~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ 243 (384)
..+++.++.+|.+|.++|.+++++++||+|.. .++++||||.+|+-- .. .. ..+.
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf------~d--------~~----~~V~----- 203 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF------QD--------AE----TPIK----- 203 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc------cc--------cc----eEhh-----
Confidence 56899999999999999999999999999853 479999999999721 00 00 0011
Q ss_pred hccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 244 LNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 244 ~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
++|+++++|++.+.++.+|.++|.++++..+||+|. +| +|+|+||.+|+++.-
T Consensus 204 -----------evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~---~g---~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 204 -----------SVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS---NG---HLVSLVARSDLLKNQ 256 (556)
T ss_dssp ----------------------------------------------------------------------
T ss_pred -----------hhcccceEEecCCCCHHHHHHHHHHccccceeEEcc---CC---cEEEEEEechhhhhh
Confidence 147889999999999999999999999999999984 46 899999999999874
No 108
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.11 E-value=6.1e-11 Score=103.46 Aligned_cols=115 Identities=15% Similarity=0.175 Sum_probs=78.9
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccc---c--
Q 016691 257 CPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQ---Q-- 329 (384)
Q Consensus 257 m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~---~-- 329 (384)
|++ +++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+||++++......... ..++. .
T Consensus 10 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~~-~~~~~~~~~~~ 82 (180)
T 3sl7_A 10 MTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD---NW---TLVGVVSDYDLLALDSISGRSQND-TNLFPDVDSTW 82 (180)
T ss_dssp SEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHTCC--------------------CC
T ss_pred cCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---eEEEEEEHHHHHhhhhhccccCCc-ccccccccchh
Confidence 566 7899999999999999999999999999983 46 899999999999754321100000 00000 0
Q ss_pred ----ccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 330 ----PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 330 ----~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
....+........++++|.++++++++++++.+|+++|.+++++++||+
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 135 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVV 135 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEE
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEE
Confidence 0000000001112445566788999999999999999999999999997
No 109
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.11 E-value=1.6e-10 Score=98.68 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=78.8
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 256 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 256 ~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
+|.+ +++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++..... . . ......
T Consensus 16 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~-~----~--~~~~~~ 82 (157)
T 2emq_A 16 FLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLER-I----E--FERLET 82 (157)
T ss_dssp TCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSS-B----C--GGGGGT
T ss_pred hccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhcccc-c----c--hHHhcC
Confidence 5765 8899999999999999999999999999983 36 89999999999987653210 0 0 000011
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+ +.++|.++++++.+++++.+|+++|.++++ +||+
T Consensus 83 ~~-------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vv 118 (157)
T 2emq_A 83 MK-------VEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVE 118 (157)
T ss_dssp CB-------GGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEE
T ss_pred Cc-------HHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEE
Confidence 22 334456789999999999999999999998 8886
No 110
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.09 E-value=5.8e-11 Score=121.08 Aligned_cols=111 Identities=16% Similarity=0.319 Sum_probs=0.5
Q ss_pred cccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhhHHHH
Q 016691 158 YELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAW 237 (384)
Q Consensus 158 ~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~~ 237 (384)
.+.| ..+++++++++++.+|.++|.++++..+||+|. ++++|+||.+|++. ... . .+
T Consensus 96 ~~~m--~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~--~~lvGivt~~Dl~~-----~~~---~-----------~v 152 (486)
T 2cu0_A 96 ERLI--VEDVITIAPDETVDFALFLMEKHGIDGLPVVED--EKVVGIITKKDIAA-----REG---K-----------LV 152 (486)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhcc--ccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHhcc-----CCC---C-----------CH
Confidence 5567 468899999999999999999999999999984 89999999999863 000 0 01
Q ss_pred HHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHH
Q 016691 238 KVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (384)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l 313 (384)
.+ +|+++++++++++++.+++++|.+++++++||+|. +| +++|+||.+||++.+
T Consensus 153 ~~----------------im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde---~g---~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 153 KE----------------LMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE---RG---KLVGLITMSDLVARK 206 (486)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HH----------------HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec---CC---eEEEEEEHHHHHHhh
Confidence 11 36778899999999999999999999999999983 46 899999999999985
No 111
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.09 E-value=9.4e-11 Score=106.38 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=78.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
.|.++++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||.+|+++++. +. +
T Consensus 18 ~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~l~Givt~~dl~~~~~-------------~~-----~ 73 (213)
T 1vr9_A 18 WVTQDFPMVEESATVRECLHRMRQYQTNECIVKDR---EG---HFRGVVNKEDLLDLDL-------------DS-----S 73 (213)
T ss_dssp GCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT---TS---BEEEEEEGGGGTTSCT-------------TS-----B
T ss_pred hhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---EEEEEEEHHHHHhhcC-------------CC-----c
Confidence 47889999999999999999999999999999983 36 8999999999876431 11 2
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+. ++|.++++++.+++++.+|+++|.+++++++||+
T Consensus 74 v~-------~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 109 (213)
T 1vr9_A 74 VF-------NKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVV 109 (213)
T ss_dssp SG-------GGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEE
T ss_pred HH-------HHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEE
Confidence 22 3345789999999999999999999999999997
No 112
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.08 E-value=1.8e-10 Score=121.43 Aligned_cols=67 Identities=27% Similarity=0.474 Sum_probs=59.8
Q ss_pred eeEEEEEeeCCCceEEEEecCCCCCCC-CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEeecCCCCCee
Q 016691 20 LVPVRFIWPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHV 89 (384)
Q Consensus 20 ~~~v~f~w~~~~~~V~v~GsF~~W~~~-~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~~d~~~p~~ 89 (384)
...|.|.|+.+|+.++|+|+||+|.+. .+|++. ++.|.+++.||||.|+|||+|||+|..||.+|..
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~~---g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~ 83 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQE---GKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPER 83 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEEC---SSEEEEEEEECSEEEEEEEEETTEEECCTTCCCE
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceEc---CCEEEEEEEeCCceEEEEEEECCeEecCCCCCCc
Confidence 577889999999999999999999975 577653 6899999999999999999999999999999854
No 113
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.07 E-value=1.6e-10 Score=86.48 Aligned_cols=48 Identities=25% Similarity=0.366 Sum_probs=44.0
Q ss_pred ceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHh
Q 016691 261 LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (384)
Q Consensus 261 ~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~ 315 (384)
+++++|++++.+|+++|.+++++++||+|+ | +++||+|.+||++.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~----~---~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG----D---EILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET----T---EEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC----C---EEEEEEEHHHHHHHHHh
Confidence 689999999999999999999999999983 6 89999999999987654
No 114
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.05 E-value=3.9e-12 Score=130.66 Aligned_cols=120 Identities=17% Similarity=0.219 Sum_probs=69.0
Q ss_pred cccccCCCCCcEEEEecCccHHHHHHHHHHcCCCeeeeeeCC--CCeEEEEeehHHHHHHHHHhccCCCCCChhhhhhhh
Q 016691 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF--KGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (384)
Q Consensus 156 ~~~dvmp~s~~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~--~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (384)
++.++|. .+++++.+++++.+|.++|.+++++.+||+|++ .++++|+||.+|+..... .. ..
T Consensus 109 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~---~~---------~~-- 172 (514)
T 1jcn_A 109 NFEQGFI--TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE---KD---------HT-- 172 (514)
T ss_dssp TCCTTSC--SSCCCCCC-----------------CEESCC--------CCEECTTTTC----------------------
T ss_pred hhhhccc--cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh---cc---------CC--
Confidence 6788894 467899999999999999999999999999953 489999999999854210 00 00
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHH
Q 016691 234 ISAWKVGKLQLNLKRQMDGNGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (384)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~ 311 (384)
..+.+ +|++ +++++.++++|.+|+.+|.+++++++||+|+ +| +++|+||.+||++
T Consensus 173 -~~v~~----------------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~---~g---~lvGiIt~~Dll~ 229 (514)
T 1jcn_A 173 -TLLSE----------------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND---CD---ELVAIIARTDLKK 229 (514)
T ss_dssp -------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS---SS---CCC----CCCCSS
T ss_pred -CCHHH----------------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC---CC---eEEEEEEHHHHHH
Confidence 00111 3677 8999999999999999999999999999983 46 8999999999998
Q ss_pred HHH
Q 016691 312 CIC 314 (384)
Q Consensus 312 ~l~ 314 (384)
.+.
T Consensus 230 ~~~ 232 (514)
T 1jcn_A 230 NRD 232 (514)
T ss_dssp CCC
T ss_pred Hhh
Confidence 764
No 115
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.05 E-value=3e-10 Score=102.72 Aligned_cols=93 Identities=12% Similarity=-0.012 Sum_probs=78.9
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhc---CCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccc
Q 016691 255 RPCPRPLVQAGPYDSLKEVALKILQN---KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 331 (384)
Q Consensus 255 ~~m~~~~itv~~~~~l~~a~~~m~~~---~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v 331 (384)
.+|+++++++++++++.+|+..|.++ +++++||+|+ +| +++|+||.+|+++. . .+
T Consensus 58 ~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~------~-------~~--- 115 (205)
T 3kxr_A 58 RYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE---AD---KYLGTVRRYDIFKH------E-------PH--- 115 (205)
T ss_dssp GGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT---TC---BEEEEEEHHHHTTS------C-------TT---
T ss_pred hhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC---CC---eEEEEEEHHHHHhC------C-------Cc---
Confidence 46899999999999999999999998 8999999983 46 89999999998742 0 01
Q ss_pred ccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 332 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 332 ~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.++ +++|.++++++++++++.+|+++|.+++++++||+
T Consensus 116 --~~v-------~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVV 153 (205)
T 3kxr_A 116 --EPL-------ISLLSEDSRALTANTTLLDAAEAIEHSREIELPVI 153 (205)
T ss_dssp --SBG-------GGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEE
T ss_pred --chH-------HHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEE
Confidence 123 33456789999999999999999999999999997
No 116
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.03 E-value=1.7e-10 Score=99.17 Aligned_cols=100 Identities=9% Similarity=0.094 Sum_probs=77.9
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccc
Q 016691 257 CPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (384)
Q Consensus 257 m~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (384)
|.+ +++++.+++++.+|+.+|.+++++++||+|+ +| +++|+||..|+++++..... . ...... ..
T Consensus 20 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~-~-~~~~~~-----~~ 86 (159)
T 1yav_A 20 MIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP---SY---RLHGLIGTNMIMNSIFGLER-I-EFEKLD-----QI 86 (159)
T ss_dssp SEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEEEHHHHHHHHBCSSS-B-CGGGTT-----TS
T ss_pred hCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---CEEEEeEHHHHHHHhhhhcc-c-chhhhc-----cC
Confidence 556 7899999999999999999999999999983 46 89999999999998753210 0 000011 12
Q ss_pred cccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 335 ~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+++ ++|.++++++.+++++.+|+++|.++++ +||+
T Consensus 87 ~v~-------~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVv 121 (159)
T 1yav_A 87 TVE-------EVMLTDIPRLHINDPIMKGFGMVINNGF--VCVE 121 (159)
T ss_dssp BHH-------HHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEE
T ss_pred CHH-------HhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEE
Confidence 233 3445789999999999999999999987 8886
No 117
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.02 E-value=3.4e-10 Score=84.71 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=43.4
Q ss_pred cEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHH
Q 016691 166 KVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILIL 214 (384)
Q Consensus 166 ~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l 214 (384)
|++++++++|+.+|+++|.++++.++||+| +++++||||.+|+++.+
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKV 47 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHT
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHH
Confidence 589999999999999999999999999998 47999999999997644
No 118
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.96 E-value=2.9e-10 Score=119.52 Aligned_cols=117 Identities=9% Similarity=-0.018 Sum_probs=83.1
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHH-hcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCC---------
Q 016691 256 PCP--RPLVQAGPYDSLKEVALKIL-QNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS--------- 323 (384)
Q Consensus 256 ~m~--~~~itv~~~~~l~~a~~~m~-~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~--------- 323 (384)
+|+ ++++++++++++.|++++|. +++.+++||+|+ +| +++|+||.+|+++.+..+.......
T Consensus 458 iM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~ 531 (632)
T 3org_A 458 IMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVL 531 (632)
T ss_dssp HCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC----------------
T ss_pred HhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccceec
Confidence 577 89999999999999999999 899999999983 36 8999999999999876542111000
Q ss_pred --cccccccccccccc-----------------ccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 324 --LPILQQPVSSIQLG-----------------TWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 324 --~~~~~~~v~~l~ig-----------------~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
...+.+.+..+.-. +....+.++|++++++|++++++.+|+++|.+++++++||+
T Consensus 532 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv 605 (632)
T 3org_A 532 LDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT 605 (632)
T ss_dssp ---------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE
T ss_pred cCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE
Confidence 00011111111000 11112567899999999999999999999999999999997
No 119
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.92 E-value=8.9e-10 Score=104.62 Aligned_cols=92 Identities=7% Similarity=0.035 Sum_probs=78.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhc-----CCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 330 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~-----~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~ 330 (384)
+|+++++++.+++++.+|+..|.++ +++++||+|+ +| +++|+||.+|++++. .+.
T Consensus 142 iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~~-------------~~~- 201 (286)
T 2oux_A 142 IMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVND-------------DDT- 201 (286)
T ss_dssp HCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTSC-------------TTS-
T ss_pred hCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcCC-------------CCC-
Confidence 5888999999999999999999998 8899999984 36 899999999998640 011
Q ss_pred cccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 331 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 331 v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++ +|.+++++|++++++.+|+++|.+++++++||+
T Consensus 202 ----~v~~-------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVV 238 (286)
T 2oux_A 202 ----LIAD-------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVT 238 (286)
T ss_dssp ----BHHH-------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ----cHHH-------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEE
Confidence 2333 345789999999999999999999999999997
No 120
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.92 E-value=1.6e-09 Score=111.42 Aligned_cols=98 Identities=10% Similarity=0.050 Sum_probs=79.9
Q ss_pred CCCCCCceEeCCC-CCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccc
Q 016691 255 RPCPRPLVQAGPY-DSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 333 (384)
Q Consensus 255 ~~m~~~~itv~~~-~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~ 333 (384)
++|+++++++.++ +++.+|+++|.+++++++||+|. ++| +++||||.+||++++...... .+.
T Consensus 388 diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~--~~g---~lvGiVt~~Dll~~l~~~~~~-------~~~---- 451 (527)
T 3pc3_A 388 ELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQ--DDG---SVLGVVGQETLITQIVSMNRQ-------QSD---- 451 (527)
T ss_dssp GGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECT--TTC---CEEEEEEHHHHHHHHHHHCCC-------TTS----
T ss_pred HhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEEC--CCC---EEEEEEEHHHHHHHHHhccCc-------CCC----
Confidence 3689999999999 99999999999999999999982 236 899999999999998764211 122
Q ss_pred ccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 334 l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
++++. |+++++++.+++++.+|+++|.++++ +||+
T Consensus 452 -~V~~i-------m~~~~~~v~~~~~l~~a~~~m~~~~~--~pVV 486 (527)
T 3pc3_A 452 -PAIKA-------LNKRVIRLNESEILGKLARVLEVDPS--VLIL 486 (527)
T ss_dssp -BGGGG-------EETTCCEEETTSBHHHHHHHHTTCSE--EEEE
T ss_pred -cHHHH-------hcCCCeEECCCCcHHHHHHHHhhCCE--EEEE
Confidence 23333 45799999999999999999988776 5765
No 121
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.91 E-value=3e-09 Score=100.37 Aligned_cols=93 Identities=12% Similarity=0.133 Sum_probs=78.9
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhc-----CCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccc
Q 016691 255 RPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ 329 (384)
Q Consensus 255 ~~m~~~~itv~~~~~l~~a~~~m~~~-----~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~ 329 (384)
.+|+++++++.+++++.+|+..|.++ ++.++||+|. +| +++|+||.+|++.+ . .+
T Consensus 139 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~------~-------~~- 198 (278)
T 2yvy_A 139 GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA------D-------PR- 198 (278)
T ss_dssp GTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHS------C-------TT-
T ss_pred hhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcC------C-------CC-
Confidence 36889999999999999999999998 7999999984 36 89999999999863 0 01
Q ss_pred ccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 330 PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 330 ~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.++++ +|.+++++|++++++.+|+++|.+++++++||+
T Consensus 199 ----~~v~~-------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 236 (278)
T 2yvy_A 199 ----TRVAE-------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVV 236 (278)
T ss_dssp ----CBSTT-------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ----CcHHH-------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEE
Confidence 12333 345789999999999999999999999999997
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.69 E-value=2.4e-08 Score=101.36 Aligned_cols=93 Identities=12% Similarity=0.133 Sum_probs=78.6
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhc-----CCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccc
Q 016691 255 RPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ 329 (384)
Q Consensus 255 ~~m~~~~itv~~~~~l~~a~~~m~~~-----~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~ 329 (384)
.+|+++++++++++++.+|++.|.++ ++.++||+|+ ++ +++|+||.+|++.. . .+
T Consensus 159 ~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~------~-------~~- 218 (473)
T 2zy9_A 159 GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA------D-------PR- 218 (473)
T ss_dssp TTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHS------C-------TT-
T ss_pred HhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcC------C-------CC-
Confidence 47899999999999999999999997 5899999984 35 89999999999863 1 01
Q ss_pred ccccccccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 330 PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 330 ~v~~l~ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.++.+ +|.++++++++++++.+|+++|.++++.++||+
T Consensus 219 ----~~v~d-------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVV 256 (473)
T 2zy9_A 219 ----TRVAE-------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVV 256 (473)
T ss_dssp ----SBGGG-------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEE
T ss_pred ----CcHHH-------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEE
Confidence 12333 345789999999999999999999999999997
No 123
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.68 E-value=2.4e-08 Score=73.39 Aligned_cols=50 Identities=24% Similarity=0.338 Sum_probs=45.2
Q ss_pred CceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhh
Q 016691 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRH 316 (384)
Q Consensus 260 ~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~ 316 (384)
+++++.+++++.+|+++|.+++++++||+| + | +++|+||.+|+++++..+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d---~-~---~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME---G-D---EILGVVTERDILDKVVAK 50 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE---T-T---EEEEEEEHHHHHHHTTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHHHHHHHHc
Confidence 468999999999999999999999999998 2 6 899999999999987643
No 124
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.66 E-value=7.2e-08 Score=98.21 Aligned_cols=96 Identities=10% Similarity=0.080 Sum_probs=78.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|..+++++.+++++.+++++|.++++.++||+|. .+++ +++|+||.+|+++. .. .+ .+
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~-----~~-------~~-----~~ 153 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFI-----SD-------YN-----AP 153 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHC-----SC-------SS-----SB
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhh-----cc-------CC-----Cc
Confidence 57889999999999999999999999999999971 0135 89999999999853 01 11 22
Q ss_pred ccccccccccCCCC-CceEeCCCCCHHHHHHHHHhCCCceeeecc
Q 016691 336 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQGDLTLFQQPA 379 (384)
Q Consensus 336 ig~~~~~v~~~~~~-~v~tv~~d~~v~~a~~~m~~~~is~lPV~~ 379 (384)
+. ++|.+ +++++++++++.+++++|.+++++.+||+-
T Consensus 154 v~-------~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd 191 (491)
T 1zfj_A 154 IS-------EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD 191 (491)
T ss_dssp TT-------TSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC
T ss_pred HH-------HHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 33 33456 889999999999999999999999999973
No 125
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.61 E-value=5.5e-08 Score=99.60 Aligned_cols=95 Identities=7% Similarity=0.047 Sum_probs=77.4
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
.|..+++++++++++.+|+.+|.++++.++||+|+. .++ +|+||||.+|+.. .. ..+.++
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~------~~------~~~~~V---- 177 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF------IQ------DYSIKI---- 177 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT------CC------CSSSBH----
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh------hc------cCCCcH----
Confidence 367888999999999999999999999999999820 135 8999999999954 01 112222
Q ss_pred ccccccccccCCCC-CceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~-~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+. |.+ +++++++++++.+|+++|.++++..+||+
T Consensus 178 -~~v-------M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVV 213 (511)
T 3usb_A 178 -SDV-------MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLV 213 (511)
T ss_dssp -HHH-------CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEE
T ss_pred -HHh-------cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEE
Confidence 233 345 89999999999999999999999999997
No 126
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.57 E-value=6.5e-09 Score=106.35 Aligned_cols=96 Identities=13% Similarity=0.064 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccc
Q 016691 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (384)
Q Consensus 257 m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (384)
|.++++++++++++.+|+.+|.+++++++||+|++...+ +++||||.+|+++. . . ..+.+ +
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~---~------~~~~~-----V 163 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--L---T------QTETK-----V 163 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--h---c------cccCc-----H
Confidence 778999999999999999999999999999998300015 89999999999864 1 0 01222 2
Q ss_pred cccccccccCCCCC--ceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 337 GTWVPRIGEANGRP--FAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 337 g~~~~~v~~~~~~~--v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.+ +|.++ ++++++++++.+|+++|.+++++.+||+
T Consensus 164 ~d-------iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVV 200 (503)
T 1me8_A 164 SD-------MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPII 200 (503)
T ss_dssp --------------------------------------------
T ss_pred HH-------HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEE
Confidence 33 33455 8999999999999999999999999997
No 127
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.51 E-value=4.1e-08 Score=100.18 Aligned_cols=93 Identities=11% Similarity=0.097 Sum_probs=68.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
.|..+++++++++++.+|+.+|.++++.++||+|+ ++ +++||||.+|+.. .. ..+.+
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~------~~------~~~~~----- 150 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRF------VT------DLTKS----- 150 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTT------CC------CTTSB-----
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhh------cc------cCCCc-----
Confidence 47889999999999999999999999999999984 36 8999999999951 11 11222
Q ss_pred ccccccccccCCC-C-CceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~-~-~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+.+.| . + +++++++++++.+|+++|.++++..+||+
T Consensus 151 v~diM-------~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVV 188 (496)
T 4fxs_A 151 VAAVM-------TPKERLATVKEGATGAEVQEKMHKARVEKILVV 188 (496)
T ss_dssp GGGTS-------EEGGGCCEEECC----CGGGTCC---CCCEEEE
T ss_pred HHHHh-------cCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEE
Confidence 33333 3 2 58999999999999999999999999997
No 128
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.49 E-value=1.4e-08 Score=103.49 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.++++++.+++++.+|+.+|.++++.++||+|+ ++ +++||||.+|+++. . . .+. +
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~--~---~-------~~~-----~ 156 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFE--K---N-------LSK-----K 156 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhh--c---C-------CCC-----c
Confidence 47889999999999999999999999999999983 36 89999999999862 0 0 112 2
Q ss_pred ccccccccccCCCC--CceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~--~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+. ++|.+ +++++++++++.+|+++|.+++++.+||+
T Consensus 157 v~-------~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVV 194 (494)
T 1vrd_A 157 IK-------DLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLV 194 (494)
T ss_dssp ---------------------------------------------
T ss_pred HH-------HHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 22 33455 89999999999999999999999999997
No 129
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.48 E-value=2.7e-07 Score=77.40 Aligned_cols=61 Identities=21% Similarity=0.399 Sum_probs=48.9
Q ss_pred CCCceeEEEEEeeC---CCceEEEEec---CCCCCCC--CCCCCCC--CCCCeEEEEEecCCce-EEEEEEE
Q 016691 16 VGSILVPVRFIWPN---GGRRVSLSGS---FTRWSEP--MPMSPSE--GCPAVFQIICRLPPGH-HQYKFYV 76 (384)
Q Consensus 16 ~~~~~~~v~f~w~~---~~~~V~v~Gs---F~~W~~~--~~m~~~~--~~~~~~~~~~~L~~G~-y~YkFiV 76 (384)
.....+.++|+... .++.|+|+|+ +.+|++. ++|.+.+ .....|++++.||+|. +||||++
T Consensus 4 ~s~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 4 GSSGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp --CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCCCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 34456889999876 4789999999 8999974 5888752 1378999999999985 9999999
No 130
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.47 E-value=1.7e-08 Score=102.03 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCccccccccccccc
Q 016691 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (384)
Q Consensus 257 m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (384)
|-.++++++|++++.||..+|.++++..+||+|+...+| +|+||||.+|+- + .. .+.+|
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f-----~d-------~~~~V----- 202 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-F-----QD-------AETPI----- 202 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-c-----cc-------cceEh-----
Confidence 456778999999999999999999999999998422235 899999999963 2 11 11222
Q ss_pred cccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 337 g~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
.++|.++++|+.+++++.+|.++|.++++..||||
T Consensus 203 -------~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVV 237 (556)
T 4af0_A 203 -------KSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIV 237 (556)
T ss_dssp ------------------------------------------
T ss_pred -------hhhcccceEEecCCCCHHHHHHHHHHccccceeEE
Confidence 23445789999999999999999999999999997
No 131
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.46 E-value=3.9e-07 Score=66.80 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=43.6
Q ss_pred cEEEEecCccHHHHHHHHHHcCCCeeeeeeCCCCeEEEEeehHHHHHHHH
Q 016691 166 KVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILR 215 (384)
Q Consensus 166 ~vv~i~~~~~l~~A~~~L~~~~i~~lPV~D~~~~~~vGilT~~Dli~~l~ 215 (384)
+++++.+++++.+|++.|.++++..+||+|+ ++++|+||.+|+++.+.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3678999999999999999999999999994 89999999999987653
No 132
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.41 E-value=3.1e-08 Score=100.97 Aligned_cols=92 Identities=13% Similarity=0.114 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
.|..+++++++++++.+|+.+|.++++.++||+| ++ +|+||||.+|+.... . .+ .+
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~~-----~-------~~-----~~ 148 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVKP-----N-------AG-----DT 148 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhcc-----c-------cC-----Cc
Confidence 4778899999999999999999999999999997 25 899999999985211 0 11 22
Q ss_pred ccccccccccCCC-C-CceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~-~-~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+.++ |. + +++++++++++.+|+++|.++++..+||+
T Consensus 149 V~~v-------Mtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVV 186 (490)
T 4avf_A 149 VAAI-------MTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVV 186 (490)
T ss_dssp ---------------------------------------------
T ss_pred HHHH-------hccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 3333 34 3 68999999999999999999999999997
No 133
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.33 E-value=2.9e-08 Score=101.83 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=53.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
+|.++++++.+++++.+|+++|.+++++++||+|+...++ +++|+||.+|+.+... . ..+. +
T Consensus 113 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----~------~~~~-----~ 174 (514)
T 1jcn_A 113 GFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----K------DHTT-----L 174 (514)
T ss_dssp TSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC-------------------------
T ss_pred ccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----c------cCCC-----C
Confidence 4778889999999999999999999999999998310035 8999999999976310 0 0111 2
Q ss_pred ccccccccccCCCC--CceEeCCCCCHHHHHHHHHhCCCceeeec
Q 016691 336 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQGDLTLFQQP 378 (384)
Q Consensus 336 ig~~~~~v~~~~~~--~v~tv~~d~~v~~a~~~m~~~~is~lPV~ 378 (384)
+. ++|.+ +++++.+++++.+|+++|.+++++.+||+
T Consensus 175 v~-------~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVV 212 (514)
T 1jcn_A 175 LS-------EVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIV 212 (514)
T ss_dssp -------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEE
T ss_pred HH-------HHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEE
Confidence 22 33456 89999999999999999999999999998
No 134
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.18 E-value=2.2e-07 Score=94.63 Aligned_cols=91 Identities=8% Similarity=0.187 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhcCCCeeeEEecCCCCCCcccEEEEeeHHHHHHHHHhhcccCCCCcccccccccccc
Q 016691 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (384)
Q Consensus 256 ~m~~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (384)
.|..+++++.+++++.+++++|.++++.++||+|+ + +++|+||.+|++. . . + .+
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----~---~lvGivt~~Dl~~---~---~--------~-----~~ 151 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED----E---KVVGIITKKDIAA---R---E--------G-----KL 151 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC----C---EEEEEEEHHHhcc---C---C--------C-----CC
Confidence 47789999999999999999999999999999972 5 8999999999975 1 0 1 12
Q ss_pred ccccccccccCCCCCceEeCCCCCHHHHHHHHHhCCCceeeecc
Q 016691 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQGDLTLFQQPA 379 (384)
Q Consensus 336 ig~~~~~v~~~~~~~v~tv~~d~~v~~a~~~m~~~~is~lPV~~ 379 (384)
+.+. |.++++++.+++++.+++++|.+++++.+||+-
T Consensus 152 v~~i-------m~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd 188 (486)
T 2cu0_A 152 VKEL-------MTKEVITVPESIEVEEALKIMIENRIDRLPVVD 188 (486)
T ss_dssp --------------------------------------------
T ss_pred HHHH-------ccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe
Confidence 2333 456889999999999999999999999999973
No 135
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=97.97 E-value=2.1e-05 Score=77.92 Aligned_cols=87 Identities=22% Similarity=0.296 Sum_probs=65.8
Q ss_pred eeEEEEEeeCC-C-------ceEEEE--ecCC---CCCCCCCCCCCCCCCCeEEEEEecCCceE-EEEEEEc--------
Q 016691 20 LVPVRFIWPNG-G-------RRVSLS--GSFT---RWSEPMPMSPSEGCPAVFQIICRLPPGHH-QYKFYVD-------- 77 (384)
Q Consensus 20 ~~~v~f~w~~~-~-------~~V~v~--GsF~---~W~~~~~m~~~~~~~~~~~~~~~L~~G~y-~YkFiVD-------- 77 (384)
...|||.|+++ | ++|+|. |..+ +|. ..+|+|.. ..|+|+.++.||++-| .|.|+||
T Consensus 30 ~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~-~~~m~r~~-~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~~ 107 (403)
T 3c8d_A 30 MFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQ-PQSMQRIA-GTDVWQWTTQLNANWRGSYCFIPTERDDIFSA 107 (403)
T ss_dssp EEEEEEEEECTTCSTTTCCCCEEEEEETTTC--------CCBCEECT-TSSEEEEEEEEETTCEEEEEEEEESCCSTTCC
T ss_pred cEEEEEEeeCCCcccccCccceEEEECcCCCccccccC-ccccccCC-CCCeEEEEEEECCCcEEEEEEEecCccccccc
Confidence 57899999974 4 689998 3222 122 24798843 2899999999999999 9999999
Q ss_pred ----------------CEeecCCCCCeeeC-CCCCeeeEEEeccCCCCC
Q 016691 78 ----------------GEWRHDENQPHVSG-NYGVVNCVYIAVPQPDMV 109 (384)
Q Consensus 78 ----------------G~w~~d~~~p~~~d-~~G~~nNvi~v~~~~~~~ 109 (384)
|..+.||.||.... ..|...|++++ ..+...
T Consensus 108 ~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~-p~~~~~ 155 (403)
T 3c8d_A 108 PSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM-PQAPLQ 155 (403)
T ss_dssp C--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC-TTCCCC
T ss_pred ccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC-CCCCcC
Confidence 77889999998764 34888999999 654433
No 136
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.92 E-value=6.9e-06 Score=66.32 Aligned_cols=60 Identities=25% Similarity=0.456 Sum_probs=47.2
Q ss_pred CceeEEEEEeeC---CCceEEEEecC---CCCCCC--CCCCCCCC--CCCeEEEEEecCCce-EEEEEEEc
Q 016691 18 SILVPVRFIWPN---GGRRVSLSGSF---TRWSEP--MPMSPSEG--CPAVFQIICRLPPGH-HQYKFYVD 77 (384)
Q Consensus 18 ~~~~~v~f~w~~---~~~~V~v~GsF---~~W~~~--~~m~~~~~--~~~~~~~~~~L~~G~-y~YkFiVD 77 (384)
+..+.++|.... .|++|+|+|+. .+|++. ++|..... .++.|++++.||+|. ++|||++.
T Consensus 4 ~~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~ 74 (108)
T 1ac0_A 4 PTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRI 74 (108)
T ss_dssp CCCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEEC
T ss_pred CCeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEE
Confidence 345778888875 47899999985 589964 68987521 357999999999995 99999993
No 137
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.27 E-value=0.00072 Score=70.60 Aligned_cols=68 Identities=25% Similarity=0.541 Sum_probs=52.1
Q ss_pred eEEEEE-eeCCCceEEEEecCCCCCCC-CCCCCCCCCCCeEEEEEe-cCCceEEEEEEE---cCEe--ecCCCCCeee
Q 016691 21 VPVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-LPPGHHQYKFYV---DGEW--RHDENQPHVS 90 (384)
Q Consensus 21 ~~v~f~-w~~~~~~V~v~GsF~~W~~~-~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiV---DG~w--~~d~~~p~~~ 90 (384)
..++|+ |...+++|.|+|+|++|... ++|++.. .+|+|+++++ +++|. .|+|.| ||.+ ..||......
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~~-~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~~ 100 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRK-ESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEAQ 100 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCCT-TTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSEE
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEECC-CCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceeec
Confidence 357786 67789999999999999754 7898732 3799999987 67787 499998 6764 5777665544
No 138
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.27 E-value=0.00035 Score=74.55 Aligned_cols=64 Identities=20% Similarity=0.459 Sum_probs=49.4
Q ss_pred EEEEE-eeCCCceEEEEecCCCCCCC-CCCCCCCCCCCeEEEEEe-------cCCceEEEEEEEc---CEe--ecCCCCC
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-------LPPGHHQYKFYVD---GEW--RHDENQP 87 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~~~-~~m~~~~~~~~~~~~~~~-------L~~G~y~YkFiVD---G~w--~~d~~~p 87 (384)
-++|. |...|++|.|+|+||+|... ++|.+.. .|+|++.++ +++|.+ |||.|+ |.| +.||...
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~--~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDK--FGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEECT--TSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeCC--CCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 46775 78889999999999999864 7998753 799999998 788874 888885 455 3566554
Q ss_pred e
Q 016691 88 H 88 (384)
Q Consensus 88 ~ 88 (384)
.
T Consensus 143 ~ 143 (755)
T 3aml_A 143 Y 143 (755)
T ss_dssp C
T ss_pred e
Confidence 3
No 139
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.19 E-value=0.00053 Score=72.76 Aligned_cols=67 Identities=31% Similarity=0.506 Sum_probs=50.8
Q ss_pred eEEEEE-eeCCCceEEEEecCCCCCCC-CCCCCCCCCCCeEEEEEe-cCCceEEEEEEE---cCEe--ecCCCCCee
Q 016691 21 VPVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-LPPGHHQYKFYV---DGEW--RHDENQPHV 89 (384)
Q Consensus 21 ~~v~f~-w~~~~~~V~v~GsF~~W~~~-~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiV---DG~w--~~d~~~p~~ 89 (384)
.-++|. |...|++|.|+|+||+|+.. .+|.+.. ..|+|++.++ +.+|. .|||.| ||++ +.||.....
T Consensus 136 ~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~-~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~ 210 (722)
T 3k1d_A 136 SGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVLG-PSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGT 210 (722)
T ss_dssp EEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEECG-GGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSB
T ss_pred ceEEEEEECCCCCEEEEEeecCCCCCCcccCEEcC-CCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceee
Confidence 346676 77789999999999999864 6898743 2699999987 78885 578887 5654 677766554
No 140
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.25 E-value=0.012 Score=46.78 Aligned_cols=65 Identities=15% Similarity=0.312 Sum_probs=48.5
Q ss_pred eEEEEEeeCCCceEEEEecCC--CCCCC--CCCCCCCCCCCeEEEEEecCCc-eEEEEEEEcC--EeecCCCCC
Q 016691 21 VPVRFIWPNGGRRVSLSGSFT--RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYVDG--EWRHDENQP 87 (384)
Q Consensus 21 ~~v~f~w~~~~~~V~v~GsF~--~W~~~--~~m~~~~~~~~~~~~~~~L~~G-~y~YkFiVDG--~w~~d~~~p 87 (384)
..+++.|..+.++|+|-..+. +|+.. .+|.+.. .++.+..++.||.| .++|+|. || .|-.+...-
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~~-~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~N 76 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDAE-ISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTKN 76 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEET-TTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTSC
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCcccccccc-CCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCcc
Confidence 467788888889999999985 79975 4787643 24544699999976 6999995 76 487765543
No 141
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.00 E-value=0.018 Score=60.62 Aligned_cols=57 Identities=23% Similarity=0.512 Sum_probs=46.2
Q ss_pred CceeEEEEEeeC-----CCceEEEEecCC---CCCC--------CC-CCCCCCCCCCeEEEEEecCCce-EEEEEEE
Q 016691 18 SILVPVRFIWPN-----GGRRVSLSGSFT---RWSE--------PM-PMSPSEGCPAVFQIICRLPPGH-HQYKFYV 76 (384)
Q Consensus 18 ~~~~~v~f~w~~-----~~~~V~v~GsF~---~W~~--------~~-~m~~~~~~~~~~~~~~~L~~G~-y~YkFiV 76 (384)
...+.++|+... .|++|+|+|+-. +|++ .+ +|.... ...|++++.||+|. +||||++
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~--~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPN--YPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTT--TTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCC--CCcEEEEEEeCCCCeEEEEEEE
Confidence 356788888865 378999999975 7998 34 777643 67999999999985 9999998
No 142
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.80 E-value=0.0083 Score=62.06 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=49.8
Q ss_pred CCCCCCC----CCCceeEEEEE-eeCCCceEEE-EecCCCCCC----CCCCCCCC--CCCCeEEEEEecCCceEEEEEEE
Q 016691 9 GHENSGV----VGSILVPVRFI-WPNGGRRVSL-SGSFTRWSE----PMPMSPSE--GCPAVFQIICRLPPGHHQYKFYV 76 (384)
Q Consensus 9 ~~~~~~~----~~~~~~~v~f~-w~~~~~~V~v-~GsF~~W~~----~~~m~~~~--~~~~~~~~~~~L~~G~y~YkFiV 76 (384)
.|++... .....+.++|+ |.+.+++|.| .|+|++|+. .++|++.. +..++|+++++.....+.|||.|
T Consensus 7 ~h~~~~~~~~~~~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i 86 (585)
T 1wzl_A 7 FHEAKGSYAYPISETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLL 86 (585)
T ss_dssp BCCSSTTTEEEEETTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred EecCCCCceeecCCCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEE
Confidence 4665544 22345666664 6668899999 899999975 36898743 12357999999887789999998
Q ss_pred c
Q 016691 77 D 77 (384)
Q Consensus 77 D 77 (384)
.
T Consensus 87 ~ 87 (585)
T 1wzl_A 87 T 87 (585)
T ss_dssp E
T ss_pred E
Confidence 4
No 143
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.65 E-value=0.0074 Score=62.12 Aligned_cols=62 Identities=21% Similarity=0.227 Sum_probs=49.8
Q ss_pred EEEEE-eeCCCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEcCE-eecCCCCCee
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGE-WRHDENQPHV 89 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVDG~-w~~d~~~p~~ 89 (384)
-++|+ |...|++|.|++.|+ ..++|.+.+ +|+|++.++ +.+|. .|+|.|||. ...||.....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~~--~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~~ 74 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERDE--KGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRYQ 74 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEECT--TCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSCC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccCC--CCEEEEEECCCCCCC-EEEEEEeCCccccCcchhhc
Confidence 45666 677899999999997 458998864 799999997 78885 699999986 7788876543
No 144
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.57 E-value=0.029 Score=59.08 Aligned_cols=59 Identities=25% Similarity=0.439 Sum_probs=46.7
Q ss_pred CceeEEEEEeeC----CCceEEEEecCC---CCCCC--C-CCCCCC-CCCCeEEEEEecCCc-eEEEEEEE
Q 016691 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSPSE-GCPAVFQIICRLPPG-HHQYKFYV 76 (384)
Q Consensus 18 ~~~~~v~f~w~~----~~~~V~v~GsF~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~G-~y~YkFiV 76 (384)
...++|+|+... .++.|+|+|+-. +|++. + +|.... .....|++++.||+| .+||||++
T Consensus 577 ~~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 577 NDQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp SCEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 356889999865 478999999865 89974 5 677610 136799999999998 59999998
No 145
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=95.49 E-value=0.0094 Score=61.68 Aligned_cols=69 Identities=20% Similarity=0.223 Sum_probs=50.6
Q ss_pred CCCCCCC----CCCceeEEEEE-eeCCCceEEE-EecCCCCCC------CCCCCCCC--CCCCeEEEEEecCCceEEEEE
Q 016691 9 GHENSGV----VGSILVPVRFI-WPNGGRRVSL-SGSFTRWSE------PMPMSPSE--GCPAVFQIICRLPPGHHQYKF 74 (384)
Q Consensus 9 ~~~~~~~----~~~~~~~v~f~-w~~~~~~V~v-~GsF~~W~~------~~~m~~~~--~~~~~~~~~~~L~~G~y~YkF 74 (384)
.|++.+. .....++++|+ |.+.+++|.| .|+|++|+. .++|++.. +..++|+++++.....+.|+|
T Consensus 7 ~h~~~~~~~~~~~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f 86 (588)
T 1j0h_A 7 YHRPADNFAYAYDSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGF 86 (588)
T ss_dssp BCCSSTTTEEESSSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEE
T ss_pred EecCCCCceEecCCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEE
Confidence 4666554 33456777775 6668899999 799999965 46898743 123579999998777889999
Q ss_pred EEc
Q 016691 75 YVD 77 (384)
Q Consensus 75 iVD 77 (384)
.|.
T Consensus 87 ~i~ 89 (588)
T 1j0h_A 87 VLY 89 (588)
T ss_dssp EEE
T ss_pred EEE
Confidence 884
No 146
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.34 E-value=0.029 Score=59.13 Aligned_cols=59 Identities=27% Similarity=0.423 Sum_probs=46.8
Q ss_pred CceeEEEEEeeC----CCceEEEEecCC---CCCCC--C-CCCCCC-CCCCeEEEEEecCCc-eEEEEEEE
Q 016691 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSPSE-GCPAVFQIICRLPPG-HHQYKFYV 76 (384)
Q Consensus 18 ~~~~~v~f~w~~----~~~~V~v~GsF~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~G-~y~YkFiV 76 (384)
...+.|+|+... .++.|+|+||-. +|++. + +|.... .....|++++.||+| .+||||++
T Consensus 581 ~~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 581 GNQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SSEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 356889999865 479999999876 89963 5 787610 136799999999998 59999998
No 147
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.17 E-value=0.035 Score=57.59 Aligned_cols=58 Identities=21% Similarity=0.308 Sum_probs=46.0
Q ss_pred ceeEEEEEeeC---CCceEEEEecCC---CCCCC--CCCCCCCC--CCCeEEEEEecCCce-EEEEEEE
Q 016691 19 ILVPVRFIWPN---GGRRVSLSGSFT---RWSEP--MPMSPSEG--CPAVFQIICRLPPGH-HQYKFYV 76 (384)
Q Consensus 19 ~~~~v~f~w~~---~~~~V~v~GsF~---~W~~~--~~m~~~~~--~~~~~~~~~~L~~G~-y~YkFiV 76 (384)
..+.++|+... .|++|+|+|+-. +|++. ++|...+- ++..|+.++.||+|. +||||+|
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 35778888875 489999999864 89974 57876531 137999999999985 9999998
No 148
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.13 E-value=0.013 Score=62.45 Aligned_cols=54 Identities=17% Similarity=0.308 Sum_probs=43.4
Q ss_pred EEEE-eeCCCceEEEEecCCCCCC-----CCCCCCCCCCCCeEEEEEe-cC------CceEEEEEEEcCE
Q 016691 23 VRFI-WPNGGRRVSLSGSFTRWSE-----PMPMSPSEGCPAVFQIICR-LP------PGHHQYKFYVDGE 79 (384)
Q Consensus 23 v~f~-w~~~~~~V~v~GsF~~W~~-----~~~m~~~~~~~~~~~~~~~-L~------~G~y~YkFiVDG~ 79 (384)
+.|. |...|++|.|++ |++|.. .++|.+.. +|+|++.++ +. +|.|.|+|.|+|.
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~ 84 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPAG--SGVWAVTVPVSSIKAAGITGAVYYGYRAWGP 84 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEECS--TTEEEEEEEHHHHHHTTCCSCCEEEEEEEBT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccCC--CCEEEEEECCcccccccCCCCEEEEEEEEee
Confidence 6776 777899999998 887653 36787643 699999986 66 8999999999975
No 149
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.12 E-value=0.038 Score=58.23 Aligned_cols=59 Identities=29% Similarity=0.443 Sum_probs=46.5
Q ss_pred CceeEEEEEeeC----CCceEEEEecCC---CCCCC--C-CCCCCC-CCCCeEEEEEecCCc-eEEEEEEE
Q 016691 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSPSE-GCPAVFQIICRLPPG-HHQYKFYV 76 (384)
Q Consensus 18 ~~~~~v~f~w~~----~~~~V~v~GsF~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~G-~y~YkFiV 76 (384)
...+.|+|+... .|+.|+|+||-. +|++. + +|.... .....|++++.||+| .+||||++
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 357889999865 479999999865 89974 5 677510 136799999999998 59999998
No 150
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.09 E-value=0.019 Score=59.68 Aligned_cols=62 Identities=21% Similarity=0.362 Sum_probs=49.0
Q ss_pred EEEEE-eeCCCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEeecCCCCCeee
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVS 90 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~~d~~~p~~~ 90 (384)
.++|+ |...+++|.|+|+ + ..++|.+.. .|+|++.+++.+|.+ |+|.|||....||......
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~~--~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSLG--GGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEEE--TTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeCC--CcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 57775 7778999999994 2 357898864 799999999888886 9999999667887765543
No 151
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.04 E-value=0.022 Score=59.75 Aligned_cols=54 Identities=20% Similarity=0.330 Sum_probs=42.6
Q ss_pred EEEEE-eeCCCceEEEEecCCCCC--CCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEcCE
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWS--EPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGE 79 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~--~~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVDG~ 79 (384)
-+.|+ |...|++|.|++ |+++. ..++|.+.. +|+|++.++ +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPGHS--GDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEEE--TTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCCC--CCEEEEEECCCCCCCE-EEEEEeee
Confidence 47776 777899999999 98765 247898643 799999885 778876 99999883
No 152
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=94.91 E-value=0.063 Score=56.89 Aligned_cols=55 Identities=18% Similarity=0.415 Sum_probs=42.6
Q ss_pred EEEEE-eeCCCceEEEEecCCCCCC-----CCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEcCEe
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWSE-----PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGEW 80 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~~-----~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVDG~w 80 (384)
.+.|. |...|++|.|++ |+++.. .++|.+.. .|+|++.++ +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~~--~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNKT--GDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEES--SSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccCC--CCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 46776 777899999999 876432 36888643 799999886 788987 999999853
No 153
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.56 E-value=0.05 Score=55.42 Aligned_cols=59 Identities=17% Similarity=0.268 Sum_probs=45.7
Q ss_pred CCceeEEEEEeeC----CCceEEEEecCC---CCCCCC---CCCCCCCCCCeEEEEEecCCce-EEEEEEE
Q 016691 17 GSILVPVRFIWPN----GGRRVSLSGSFT---RWSEPM---PMSPSEGCPAVFQIICRLPPGH-HQYKFYV 76 (384)
Q Consensus 17 ~~~~~~v~f~w~~----~~~~V~v~GsF~---~W~~~~---~m~~~~~~~~~~~~~~~L~~G~-y~YkFiV 76 (384)
....+.++|+... .|++|+|+|+-. +|++.. +|.... .++.|++++.||+|. ++|||++
T Consensus 416 t~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~-~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 416 GVTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDS-HSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp SCCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEET-TTTEEEEEEEEETTCCEEEEEEE
T ss_pred ccCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCC-CCCEEEEEEEECCCCcEEEEEEE
Confidence 3456889999764 489999999865 799763 565422 245999999999985 9999998
No 154
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=93.89 E-value=0.019 Score=59.27 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCCCCC----CCCceeEEEEE-eeCCCceEEE-EecCCCCCC---CCCCCCCC--CCCCeEEEEEecCCceEEEEEEEc
Q 016691 9 GHENSGV----VGSILVPVRFI-WPNGGRRVSL-SGSFTRWSE---PMPMSPSE--GCPAVFQIICRLPPGHHQYKFYVD 77 (384)
Q Consensus 9 ~~~~~~~----~~~~~~~v~f~-w~~~~~~V~v-~GsF~~W~~---~~~m~~~~--~~~~~~~~~~~L~~G~y~YkFiVD 77 (384)
.|++... .....+.++|+ |.+.+++|.| .|+|++|.. ..+|++.. +..|+|++.++.....+.|||.|.
T Consensus 7 ~h~~~~~~~~~~~~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 7 YHRPRKNFSYAYNGTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp BCCSSTTSSEESSSSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred EecCCCCceEecCCCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 5666554 23345566664 6667899999 799999976 36898743 124569999988777788888873
No 155
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=93.74 E-value=0.068 Score=56.61 Aligned_cols=64 Identities=20% Similarity=0.328 Sum_probs=47.0
Q ss_pred EEEEE-eeCCCceEEEEecCCCCCCC-CCCCCCCCCCCeEEEEEe-cCCceEEEEEEEc--CEe--ecCCCCCe
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD--GEW--RHDENQPH 88 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~~~-~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVD--G~w--~~d~~~p~ 88 (384)
.++|+ |...+++|.|++.|++|... ++|.+.. .|+|++.++ +.+|. .|+|.|+ |.| ..||....
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DPya~~ 184 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLE--KGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQYAKA 184 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEECG--GGEEEEEEESCCTTC-EEEEEEEETTEEEEECCTTCSS
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccCC--CCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCCcccc
Confidence 46776 77789999999999988653 6998754 689999987 45664 5666664 764 56776554
No 156
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=92.99 E-value=0.096 Score=57.90 Aligned_cols=67 Identities=18% Similarity=0.217 Sum_probs=48.5
Q ss_pred EEEEE-eeCCCceEEEEe-cCCCCCC-CCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEc------CE----eecCCCCC
Q 016691 22 PVRFI-WPNGGRRVSLSG-SFTRWSE-PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD------GE----WRHDENQP 87 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~G-sF~~W~~-~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVD------G~----w~~d~~~p 87 (384)
-+.|. |...|++|.|++ +|++|.. .++|.+.. ..|+|++.+. +.+|.+ |+|.|+ |. ...||...
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~~-~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~ 382 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRDS-ASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAH 382 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEECT-TTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCS
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeECC-CCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCccc
Confidence 36676 777899999999 8999975 46898543 3689999875 677865 777774 42 36777665
Q ss_pred eee
Q 016691 88 HVS 90 (384)
Q Consensus 88 ~~~ 90 (384)
...
T Consensus 383 ~~~ 385 (1083)
T 2fhf_A 383 SLS 385 (1083)
T ss_dssp CBC
T ss_pred eec
Confidence 433
No 157
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=92.21 E-value=0.16 Score=52.92 Aligned_cols=61 Identities=25% Similarity=0.405 Sum_probs=46.1
Q ss_pred EEEE-eeCCCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEc-CEeecCCCCCeee
Q 016691 23 VRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD-GEWRHDENQPHVS 90 (384)
Q Consensus 23 v~f~-w~~~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVD-G~w~~d~~~p~~~ 90 (384)
+.|+ |...|++|.|++ +|. ..+|.+.+ +|+|.+.++ +.+|. .|+|.|+ |....||......
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~-~~~m~~~~--~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGK-DQEMQANG--DGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTE-EEECEECS--TTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred EEEEEECCCCCEEEEEE---CCC-cccCeecC--CEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 6777 677899999998 343 37898864 689999874 77786 5889995 5678888766544
No 158
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=91.59 E-value=0.099 Score=56.58 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=48.3
Q ss_pred EEEE-eeCCCceEEEEe-cCCCCCC---CCCCCCCCCCCCeEEEEEecCCce-----EEEEEEEc--CE--eecCCCCCe
Q 016691 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLPPGH-----HQYKFYVD--GE--WRHDENQPH 88 (384)
Q Consensus 23 v~f~-w~~~~~~V~v~G-sF~~W~~---~~~m~~~~~~~~~~~~~~~L~~G~-----y~YkFiVD--G~--w~~d~~~p~ 88 (384)
+.|+ |...|++|.|++ ++++|.. .++|.+. .+|+|++.+.+.+|. +.|+|.|+ |. ...||....
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN--NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC--TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC--CCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 6777 677899999998 7888853 4789874 379999999776662 67888885 33 467777654
Q ss_pred e
Q 016691 89 V 89 (384)
Q Consensus 89 ~ 89 (384)
.
T Consensus 224 ~ 224 (877)
T 3faw_A 224 L 224 (877)
T ss_dssp B
T ss_pred c
Confidence 3
No 159
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=91.42 E-value=0.23 Score=52.47 Aligned_cols=65 Identities=14% Similarity=0.264 Sum_probs=47.2
Q ss_pred EEEE-eeCCCceEEEEe-cCCCCCC---CCCCCCCCCCCCeEEEEEecC--Cc-----eEEEEEEEc--CE--eecCCCC
Q 016691 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLP--PG-----HHQYKFYVD--GE--WRHDENQ 86 (384)
Q Consensus 23 v~f~-w~~~~~~V~v~G-sF~~W~~---~~~m~~~~~~~~~~~~~~~L~--~G-----~y~YkFiVD--G~--w~~d~~~ 86 (384)
+.|+ |...|++|.|++ +|++|.. .++|.+.. .|+|++.++-. +| -+.|+|.|+ |. ...||..
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya 103 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGE--RGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 103 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECG--GGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccCC--CCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCce
Confidence 6776 777899999999 8988864 47898743 79999988641 34 267888885 54 4577766
Q ss_pred Cee
Q 016691 87 PHV 89 (384)
Q Consensus 87 p~~ 89 (384)
..+
T Consensus 104 ~~~ 106 (714)
T 2ya0_A 104 KSL 106 (714)
T ss_dssp SEE
T ss_pred eee
Confidence 543
No 160
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=91.22 E-value=0.039 Score=56.25 Aligned_cols=57 Identities=23% Similarity=0.420 Sum_probs=0.0
Q ss_pred ceeEEEEEe-eC---CCceEEEEecCC---CCCCC--CCCCCCCCCCCeEEEEEecCCce-EEEEEEE
Q 016691 19 ILVPVRFIW-PN---GGRRVSLSGSFT---RWSEP--MPMSPSEGCPAVFQIICRLPPGH-HQYKFYV 76 (384)
Q Consensus 19 ~~~~v~f~w-~~---~~~~V~v~GsF~---~W~~~--~~m~~~~~~~~~~~~~~~L~~G~-y~YkFiV 76 (384)
..++|+|+. .. .|++|+|+|+-. +|++. ++|.... ....|++++.||+|. +||||+|
T Consensus 429 ~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~-~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 429 ALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTS-GYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp --------------------------------------------------------------------
T ss_pred CEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCC-CCCeEEEEEEeCCCCcEEEEEEE
Confidence 457888886 32 489999999876 79974 6887321 267899999999995 9999997
No 161
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=90.88 E-value=0.16 Score=54.64 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=38.4
Q ss_pred EEEEE-eeCCCceEEEEecCCCCCCCC--CCCCCCCCCCeEEEEEe-cCCceEEEEEEEcC
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWSEPM--PMSPSEGCPAVFQIICR-LPPGHHQYKFYVDG 78 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~~~~--~m~~~~~~~~~~~~~~~-L~~G~y~YkFiVDG 78 (384)
-++|+ |...|++|.|++-+++|.... .|.+. .+|+|++.++ +.+|. .|+|.|++
T Consensus 137 g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~--~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 137 SVSLHLWAPTAQGVSVCFFDGPAGPALETVQLKE--SNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEEECTTCSEEEEEEESTTTSCEEEEEECEE--ETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCeeeeeeecC--CCCEEEEEECCCCCCC-EEEEEEeC
Confidence 36787 788899999999666666542 23332 3799999987 56675 48888865
No 162
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.95 E-value=0.22 Score=54.17 Aligned_cols=63 Identities=16% Similarity=0.244 Sum_probs=44.8
Q ss_pred EEEEE-eeCCCceEEEEecCCCCC----CCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEE--cCE--eecCCCCCe
Q 016691 22 PVRFI-WPNGGRRVSLSGSFTRWS----EPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV--DGE--WRHDENQPH 88 (384)
Q Consensus 22 ~v~f~-w~~~~~~V~v~GsF~~W~----~~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiV--DG~--w~~d~~~p~ 88 (384)
.++|+ |...+++|.|++ |++|. ..++|.+.. .|+|++.++ +.+|. .|+|.| +|. ...||....
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~~ 398 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKSD--NGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYARA 398 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEECG--GGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCSS
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeCC--CCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCccee
Confidence 46665 666799999997 99994 247898754 689999987 45665 366666 564 456776543
No 163
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.13 E-value=0.55 Score=51.10 Aligned_cols=59 Identities=27% Similarity=0.513 Sum_probs=41.6
Q ss_pred eEEEEEeeCCCceEEEEecC-------CCCCCCCC---CCCCCCCCCeEEEEEecCCceEEEEEEEcCEee
Q 016691 21 VPVRFIWPNGGRRVSLSGSF-------TRWSEPMP---MSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (384)
Q Consensus 21 ~~v~f~w~~~~~~V~v~GsF-------~~W~~~~~---m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~ 81 (384)
+++..--...+..+.+.|+| .+|++... |.+. .+|.|+.+-.||+|.|+||+.++|.|.
T Consensus 153 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~--~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 153 IPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKI--NPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp ECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEE--ETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccccccccccchhhhccccccCCCCCCcceeecc--CCcceeeeeccCCcceeEEEeecCccc
Confidence 34433333345568888877 46887642 3332 278999999999999999999997663
No 164
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=88.12 E-value=0.34 Score=43.40 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=39.9
Q ss_pred CCceEEEEecCCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEe
Q 016691 30 GGRRVSLSGSFTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEW 80 (384)
Q Consensus 30 ~~~~V~v~GsF~~W~~~--~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w 80 (384)
..+++||+|++++|... .+|.+....++.|...+.|+.|. +|||.-+..|
T Consensus 11 ~p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~ 62 (221)
T 4fch_A 11 PPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENE 62 (221)
T ss_dssp CCSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTC
T ss_pred CcceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCc
Confidence 35789999999998743 57877655579999999998875 8999887555
No 165
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=86.68 E-value=0.5 Score=49.11 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=41.2
Q ss_pred eEEEEE-e----eCCCceEEEEecCCCCCCCCCCCC--CC--CCCCeEEEEEecCCceEEEEEEEcC
Q 016691 21 VPVRFI-W----PNGGRRVSLSGSFTRWSEPMPMSP--SE--GCPAVFQIICRLPPGHHQYKFYVDG 78 (384)
Q Consensus 21 ~~v~f~-w----~~~~~~V~v~GsF~~W~~~~~m~~--~~--~~~~~~~~~~~L~~G~y~YkFiVDG 78 (384)
..++|+ | ...+++|.|++.|++-...++|.+ .. +..|+|++.++.......|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 356776 5 346899999999975112378987 32 1247999999876666789999964
No 166
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=86.61 E-value=0.54 Score=51.68 Aligned_cols=63 Identities=13% Similarity=0.229 Sum_probs=45.1
Q ss_pred EEEE-eeCCCceEEEEe-cCCCCCC---CCCCCCCCCCCCeEEEEEecC--Cc-----eEEEEEEEc--CE--eecCCCC
Q 016691 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLP--PG-----HHQYKFYVD--GE--WRHDENQ 86 (384)
Q Consensus 23 v~f~-w~~~~~~V~v~G-sF~~W~~---~~~m~~~~~~~~~~~~~~~L~--~G-----~y~YkFiVD--G~--w~~d~~~ 86 (384)
+.|+ |...|++|.|++ +|++|.. .++|.+. ..|+|++.++-. +| -+.|+|.|+ |. ...||..
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG--ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC--GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC--CCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 6776 677899999999 8998864 4789874 378999888642 23 256777775 53 4577754
Q ss_pred C
Q 016691 87 P 87 (384)
Q Consensus 87 p 87 (384)
.
T Consensus 411 ~ 411 (1014)
T 2ya1_A 411 K 411 (1014)
T ss_dssp S
T ss_pred e
Confidence 4
No 167
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=79.20 E-value=3 Score=32.72 Aligned_cols=64 Identities=16% Similarity=0.441 Sum_probs=43.9
Q ss_pred eEEEEEeeCCCceEEEEecCC--CCCCC--CCCCCCCCCCCeEEEEEecCCc-eEEEEEEEcC--EeecCCCC
Q 016691 21 VPVRFIWPNGGRRVSLSGSFT--RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYVDG--EWRHDENQ 86 (384)
Q Consensus 21 ~~v~f~w~~~~~~V~v~GsF~--~W~~~--~~m~~~~~~~~~~~~~~~L~~G-~y~YkFiVDG--~w~~d~~~ 86 (384)
..+++.|..+..+|+|=-.+. +|+.. ++|.+.. ..|.|..++.|+.+ .++|.| -|| .|-++...
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~~-~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g~ 80 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSE-XEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQGR 80 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEECS-STTEEEEEECCCTTCEEEEEE-ECSSSCEECGGGT
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCccccc-cCCceEEEEecCCCceEEEEE-eCCCcccccCCCc
Confidence 345566667777777765564 48864 5787632 37889999999965 699999 454 58665443
No 168
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=64.78 E-value=5.1 Score=39.71 Aligned_cols=45 Identities=13% Similarity=0.307 Sum_probs=35.3
Q ss_pred ceEEEEecCCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEc
Q 016691 32 RRVSLSGSFTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVD 77 (384)
Q Consensus 32 ~~V~v~GsF~~W~~~--~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVD 77 (384)
...||+|++++|... .+|.+....++.|.....+..+. +|||.-.
T Consensus 151 ~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 151 DGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEG
T ss_pred ceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeec
Confidence 568999999999854 45666555578999999987766 7999864
No 169
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=60.51 E-value=16 Score=28.64 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=36.0
Q ss_pred CceEEEEec--CCCCCC-CCC--CCCC----CCCCCeEEEEEecCCc-eEEEEEEEcCEeecCC
Q 016691 31 GRRVSLSGS--FTRWSE-PMP--MSPS----EGCPAVFQIICRLPPG-HHQYKFYVDGEWRHDE 84 (384)
Q Consensus 31 ~~~V~v~Gs--F~~W~~-~~~--m~~~----~~~~~~~~~~~~L~~G-~y~YkFiVDG~w~~d~ 84 (384)
.++|.|.=+ |++|+. ... .... ...-..|+..+.||+. .+--+|.++|.-.-|.
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDN 96 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDN 96 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEEC
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcC
Confidence 377888777 999998 321 1111 1124589999999875 4777899999644443
No 170
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.50 E-value=8.5 Score=32.49 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=41.3
Q ss_pred eEEEEEeeC--CCceEEEEecCCCCCCC--CCCCCCC-----CCCCeEEEEEecCC-----c--eEEEEEEEcCEeecC
Q 016691 21 VPVRFIWPN--GGRRVSLSGSFTRWSEP--MPMSPSE-----GCPAVFQIICRLPP-----G--HHQYKFYVDGEWRHD 83 (384)
Q Consensus 21 ~~v~f~w~~--~~~~V~v~GsF~~W~~~--~~m~~~~-----~~~~~~~~~~~L~~-----G--~y~YkFiVDG~w~~d 83 (384)
..-++.-.+ -.++|.|.=+|++|+.. +++.+.. .....|..++.||+ + .+-.+|.++|...-|
T Consensus 48 l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~eyWD 126 (156)
T 2eef_A 48 IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQTYWD 126 (156)
T ss_dssp EEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEEEEE
T ss_pred EEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCEEec
Confidence 333444444 35889999999999964 2343321 12458999999986 3 366788899964443
No 171
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=52.08 E-value=28 Score=27.35 Aligned_cols=62 Identities=15% Similarity=0.302 Sum_probs=44.7
Q ss_pred CCCceeEEEEEeeCCC---ceEEEEe-cCCCCCCCCCCCCCCCCCCeEEEEE-ecCCceEEEEEEE-cCEeecC
Q 016691 16 VGSILVPVRFIWPNGG---RRVSLSG-SFTRWSEPMPMSPSEGCPAVFQIIC-RLPPGHHQYKFYV-DGEWRHD 83 (384)
Q Consensus 16 ~~~~~~~v~f~w~~~~---~~V~v~G-sF~~W~~~~~m~~~~~~~~~~~~~~-~L~~G~y~YkFiV-DG~w~~d 83 (384)
..+...-+.+.+.+++ ..|.|.| +=++|. +|.++ ...|+..- .-+.|-+.||+.. ||+|...
T Consensus 23 snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rn---Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 23 SDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKK---GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp CCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEE---TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred CCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---Ecccc---CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 3467777888887754 6789996 667886 68885 46899765 1345789999998 6887654
No 172
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=44.66 E-value=18 Score=34.26 Aligned_cols=50 Identities=16% Similarity=0.140 Sum_probs=37.1
Q ss_pred CceEEEEecCCCCCC--CCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEee
Q 016691 31 GRRVSLSGSFTRWSE--PMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (384)
Q Consensus 31 ~~~V~v~GsF~~W~~--~~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~ 81 (384)
....||+|++.+|.. ..+|.+....+|.|.....|+.| .+|||.-+..|-
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~ 200 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEY 200 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCC
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCc
Confidence 467999999987653 24676655457899999999877 578888765553
No 173
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=44.09 E-value=23 Score=28.67 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=19.0
Q ss_pred EecCCc-eEEEEEEEcCEeecCCCC
Q 016691 63 CRLPPG-HHQYKFYVDGEWRHDENQ 86 (384)
Q Consensus 63 ~~L~~G-~y~YkFiVDG~w~~d~~~ 86 (384)
+.|..| .|.|+| ++|+|+-+.+.
T Consensus 100 vtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 100 VTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEecCCCEEEEEE-cCCEEEEcccc
Confidence 568888 599999 99999987654
No 174
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=43.80 E-value=11 Score=33.30 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=35.3
Q ss_pred ceEEEEec--CCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEe
Q 016691 32 RRVSLSGS--FTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEW 80 (384)
Q Consensus 32 ~~V~v~Gs--F~~W~~~--~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w 80 (384)
.+|+|+|+ -++|... .+|+.....++.|.....|..|.++++|..+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 46999998 4689864 3565433347889988999999888877665444
No 175
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=41.79 E-value=24 Score=34.69 Aligned_cols=53 Identities=25% Similarity=0.466 Sum_probs=36.8
Q ss_pred CceEEEEecCCCCCCC-------CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCEeecCC
Q 016691 31 GRRVSLSGSFTRWSEP-------MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDE 84 (384)
Q Consensus 31 ~~~V~v~GsF~~W~~~-------~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVDG~w~~d~ 84 (384)
...++++|++++|.-. .+|.......+.|...+.+..+ .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999977532 1243333347889888888765 588999988885543
No 176
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=35.33 E-value=98 Score=26.14 Aligned_cols=72 Identities=11% Similarity=0.245 Sum_probs=44.1
Q ss_pred eEEEEEeeCCCc------eEEEEecCCCCCCCCCCCCCC------------CCCCeEEEEEecCCceEEEEEEEcCEeec
Q 016691 21 VPVRFIWPNGGR------RVSLSGSFTRWSEPMPMSPSE------------GCPAVFQIICRLPPGHHQYKFYVDGEWRH 82 (384)
Q Consensus 21 ~~v~f~w~~~~~------~V~v~GsF~~W~~~~~m~~~~------------~~~~~~~~~~~L~~G~y~YkFiVDG~w~~ 82 (384)
..++|+|...+. ++||+ =.+|++..||++++ ..++.++.++.||.++--| ++|=..|..
T Consensus 74 G~~~f~w~~TA~H~t~~~~~YIT--K~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG~-hVI~~vWq~ 150 (166)
T 4a02_A 74 GPLDITWNLTAQHRTASWDYYIT--KNGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKGY-HVIYAVWGI 150 (166)
T ss_dssp EEEEEEEEESSCCCEEEEEEEEE--CTTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCEE-EEEEEEEEE
T ss_pred CceEEEEeeecccCCCeEEEEEc--CCCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCccC-EEEEEEEEe
Confidence 358999977442 47775 45788877887542 1135677778888653222 255577876
Q ss_pred CCCCCeeeCCCCCeeeEEEe
Q 016691 83 DENQPHVSGNYGVVNCVYIA 102 (384)
Q Consensus 83 d~~~p~~~d~~G~~nNvi~v 102 (384)
.+. ...+.|+++|
T Consensus 151 ~Dt-------~eaFY~csDV 163 (166)
T 4a02_A 151 GDT-------VNAFYQAIDV 163 (166)
T ss_dssp SSS-------SEEEEEEEEE
T ss_pred cCC-------CCCCEEEEEE
Confidence 543 1246677776
No 177
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=33.68 E-value=1.2e+02 Score=25.68 Aligned_cols=71 Identities=14% Similarity=0.292 Sum_probs=43.5
Q ss_pred EEEEEeeCCC------ceEEEEecCCCCCCCCCCCCCC--------------CCCCeEEEEEecCCceEEEEEEEcCEee
Q 016691 22 PVRFIWPNGG------RRVSLSGSFTRWSEPMPMSPSE--------------GCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (384)
Q Consensus 22 ~v~f~w~~~~------~~V~v~GsF~~W~~~~~m~~~~--------------~~~~~~~~~~~L~~G~y~YkFiVDG~w~ 81 (384)
+++|+|...+ =++||+- .+|++..||++.+ ..++.++.++.||.|+--| ++|=..|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFITK--PNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEECC--CCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 7899997743 2477743 5677777776432 0124677788888754333 45556787
Q ss_pred cCCCCCeeeCCCCCeeeEEEe
Q 016691 82 HDENQPHVSGNYGVVNCVYIA 102 (384)
Q Consensus 82 ~d~~~p~~~d~~G~~nNvi~v 102 (384)
..+ ....+.|+++|
T Consensus 153 ~~D-------t~eaFY~c~DV 166 (170)
T 2bem_A 153 IAD-------TANAFYQAIDV 166 (170)
T ss_dssp ESS-------SSEEEEEEEEE
T ss_pred ecc-------CCCCCEEEEEE
Confidence 654 11246777777
No 178
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=30.91 E-value=20 Score=25.68 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=16.1
Q ss_pred ecCCCCCCCCCCCCCCCCCCeEEEEEecCCc
Q 016691 38 GSFTRWSEPMPMSPSEGCPAVFQIICRLPPG 68 (384)
Q Consensus 38 GsF~~W~~~~~m~~~~~~~~~~~~~~~L~~G 68 (384)
|||.+|+. ..|+.+ ++.-++.+.+|.|
T Consensus 1 ~~~s~W~q-P~lk~~---g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQ-PELESD---EHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCC-CEEEEE---TTEEEEEEECCSS
T ss_pred CCcccccC-ceeecC---CCCceEEEeCCCC
Confidence 79999986 345543 5677778888877
No 179
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=27.37 E-value=37 Score=26.53 Aligned_cols=17 Identities=24% Similarity=0.597 Sum_probs=13.4
Q ss_pred ceEEEEEEEcCEeecCCCC
Q 016691 68 GHHQYKFYVDGEWRHDENQ 86 (384)
Q Consensus 68 G~y~YkFiVDG~w~~d~~~ 86 (384)
| |+|.|. +|.|+++.+.
T Consensus 68 G-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 68 G-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp E-EEEEEE-TTEEEETTTC
T ss_pred c-eeeeec-CCEEEECCCC
Confidence 5 888885 8999987654
No 180
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=27.23 E-value=1.6e+02 Score=22.62 Aligned_cols=60 Identities=15% Similarity=0.299 Sum_probs=43.4
Q ss_pred CceeEEEEEeeCCC---ceEEEEecCC-CCCCCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEE-cCEeecC
Q 016691 18 SILVPVRFIWPNGG---RRVSLSGSFT-RWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV-DGEWRHD 83 (384)
Q Consensus 18 ~~~~~v~f~w~~~~---~~V~v~GsF~-~W~~~~~m~~~~~~~~~~~~~~~-L~~G~y~YkFiV-DG~w~~d 83 (384)
+...-+.+.+.+++ ..|.|.|+=+ +|. +|.+ - ...|...-. ...|-+.||+.. ||++...
T Consensus 14 ~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~r-w--Ga~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 14 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTK-K--GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp TTEEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEE-E--TTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred cceEEEEEEEcCCCccEEEEEEEeCCCCCeE---Eecc-c--CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 55667777777654 5789999976 686 5887 4 568987752 445788888887 7877654
No 181
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=25.94 E-value=85 Score=24.34 Aligned_cols=53 Identities=23% Similarity=0.319 Sum_probs=35.4
Q ss_pred CcEEEEecCccHHHHHHHHHHcCCCeee---eeeCCCC------eEEEEeehHHHHHHHHHhc
Q 016691 165 GKVTALDVNLAVKQAFHVLYEQGLPMVP---LWDDFKG------RFVGVLSALDFILILRELG 218 (384)
Q Consensus 165 ~~vv~i~~~~~l~~A~~~L~~~~i~~lP---V~D~~~~------~~vGilT~~Dli~~l~~~~ 218 (384)
..++.++.+..-.+.-.+..+.++.++| ++|. +| ++.|.++..+|.+.|....
T Consensus 66 ~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~-~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 66 TVLLQANVTANDAQDVALLKHLNVLGLPTILFFDG-QGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp SEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECT-TSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred cEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECC-CCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 4666777754434556667777888777 5664 34 3568889999888776543
No 182
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=24.32 E-value=27 Score=23.98 Aligned_cols=13 Identities=46% Similarity=0.925 Sum_probs=10.5
Q ss_pred EcCEeecCCCCCe
Q 016691 76 VDGEWRHDENQPH 88 (384)
Q Consensus 76 VDG~w~~d~~~p~ 88 (384)
|||+|.+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 5899999988764
No 183
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=23.80 E-value=93 Score=24.75 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=11.8
Q ss_pred eEEEEEeeCC----CceEEEEe
Q 016691 21 VPVRFIWPNG----GRRVSLSG 38 (384)
Q Consensus 21 ~~v~f~w~~~----~~~V~v~G 38 (384)
.+++|+|.+. .+.+.+.+
T Consensus 43 ~~V~~~~~N~~~~~~H~~~i~~ 64 (139)
T 2aan_A 43 QTVTIRFKNNSAVQQHNWILVK 64 (139)
T ss_dssp CEEEEEEECCCSSCCBCCEEES
T ss_pred CEEEEEEEeCCCCCCeeEEEec
Confidence 4677888763 56666665
No 184
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=22.14 E-value=89 Score=31.96 Aligned_cols=51 Identities=20% Similarity=0.229 Sum_probs=34.7
Q ss_pred eeEEEEEeeC-CCceEEEEecCCCCCCCCCCCCCCCCCC---eEEEEEecCCceEEEEEEE
Q 016691 20 LVPVRFIWPN-GGRRVSLSGSFTRWSEPMPMSPSEGCPA---VFQIICRLPPGHHQYKFYV 76 (384)
Q Consensus 20 ~~~v~f~w~~-~~~~V~v~GsF~~W~~~~~m~~~~~~~~---~~~~~~~L~~G~y~YkFiV 76 (384)
.+.++|+=+. ...+|.+.|+ ..+||++.. +.+ .|++.++.+.....|+|.|
T Consensus 124 ~~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~-~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 124 RVHVLLRTQKGVIKGATFLGE-----KHVPMRKKA-SDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEEEETTTEEEEEEESS-----SEEECEEEE-ECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred eEEEEEEcccCCcceEEEeCC-----CEEEEEEEe-cCCCeEEEEEEEECCCCceEEEEEE
Confidence 3444444333 3577888764 347998754 244 4888888888889999988
No 185
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=20.61 E-value=71 Score=33.14 Aligned_cols=55 Identities=16% Similarity=0.142 Sum_probs=33.7
Q ss_pred eeEEEEEeeCCCceEEEEecCCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEc
Q 016691 20 LVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVD 77 (384)
Q Consensus 20 ~~~v~f~w~~~~~~V~v~GsF~~W~~~~~m~~~~~~~~~~~~~~~L~~G~y~YkFiVD 77 (384)
.+.++|+-+.+..+|.+...-..|.. .|....+....|++++. +.+.+.|.|.++
T Consensus 133 ~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~ 187 (696)
T 4aee_A 133 EIIIRLIAPTEINEPLIDLGNEIREP--LTKHVVGDNIVYQYIIP-SRSILRYRFIFN 187 (696)
T ss_dssp EEEEEEEEETTSCCCEEECSSCEECC--SEEEEETTEEEEEEEEE-CCSEEEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEcCCcceee--eeeeecCCceEEEEEEc-CCCeEEEEEEEE
Confidence 45566654555566666544334432 23322222348999999 778899999995
No 186
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=20.21 E-value=83 Score=25.04 Aligned_cols=17 Identities=24% Similarity=0.122 Sum_probs=11.1
Q ss_pred eEEEEEeeC-----CCceEEEE
Q 016691 21 VPVRFIWPN-----GGRRVSLS 37 (384)
Q Consensus 21 ~~v~f~w~~-----~~~~V~v~ 37 (384)
.+|+|+|.+ ..+++.+.
T Consensus 41 ~tV~~~~~N~~~~~~~H~~~~~ 62 (140)
T 1qhq_A 41 TVVRLDFVNQNNLGVQHNWVLV 62 (140)
T ss_dssp CEEEEEEEECCSSCCCBCCEEE
T ss_pred CEEEEEEECCCCCCCceeEEEe
Confidence 467888866 24666665
Done!