Your job contains 1 sequence.
>016696
MCSTFSLAAKPSIGESRGKIWSLQVINSAARSELNINIPREKNSIILPRLSTQGMLQSDV
HICEIAERQSLANNLSDKGDAFRSKPQLDAMFLDEAYERCRKICAEYAKTYYLGTLLLTK
ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGHPNDILDAALTDTV
SKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSAS
AQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWR
EFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYV
GNIKKLFLVRQAYYRAQSISTATD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016696
(384 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6ED64 - symbol:Q6ED64 "Phytoene synthase 1" sp... 975 3.5e-98 1
TAIR|locus:2167225 - symbol:PSY "PHYTOENE SYNTHASE" speci... 969 1.5e-97 1
UNIPROTKB|Q9UUQ6 - symbol:CARRP "Bifunctional lycopene cy... 144 3.4e-07 2
UNIPROTKB|P37295 - symbol:al-2 "Bifunctional lycopene cyc... 142 1.7e-06 2
UNIPROTKB|Q7Z859 - symbol:crtYB "Bifunctional lycopene cy... 118 1.8e-06 2
MGI|MGI:1924197 - symbol:Ndufaf6 "NADH dehydrogenase (ubi... 128 1.9e-05 1
UNIPROTKB|Q60AN4 - symbol:sqs "Squalene synthase" species... 127 2.9e-05 1
UNIPROTKB|A7YVD7 - symbol:NDUFAF6 "NADH dehydrogenase (ub... 125 4.2e-05 1
UNIPROTKB|Q9P854 - symbol:carRA "Bifunctional lycopene cy... 128 5.2e-05 1
RGD|1309085 - symbol:Ndufaf6 "NADH dehydrogenase (ubiquin... 123 7.0e-05 1
UNIPROTKB|F1PMK8 - symbol:NDUFAF6 "Uncharacterized protei... 120 0.00015 1
UNIPROTKB|Q330K2 - symbol:NDUFAF6 "NADH dehydrogenase (ub... 118 0.00026 1
UNIPROTKB|F1RY58 - symbol:NDUFAF6 "Uncharacterized protei... 118 0.00026 1
>UNIPROTKB|Q6ED64 [details] [associations]
symbol:Q6ED64 "Phytoene synthase 1" species:39946 "Oryza
sativa Indica Group" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002060 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016117 GO:GO:0016767
EMBL:AY445521 ProteinModelPortal:Q6ED64 STRING:Q6ED64
Gramene:Q6ED64 Uniprot:Q6ED64
Length = 421
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 179/284 (63%), Positives = 221/284 (77%)
Query: 93 LDEAYERCRKICAEYAKXXXXXXXXXXKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
L +AY RC +IC EYAK ++R++AIWA+Y WC+RTDELVDGPNA ++P+A
Sbjct: 126 LKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVDGPNASHITPSA 185
Query: 153 LDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQEL 212
LDRWE+RL D+F G P D+LDAAL+DT+SK + I+PFRDMI+GMR D K RY NF EL
Sbjct: 186 LDRWEKRLDDLFTGRPYDMLDAALSDTISKSPIDIQPFRDMIEGMRSDLRKTRYKNFDEL 245
Query: 213 YLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGR 272
Y+YCYY GTVGLMSVPVMG+ P+S A+ +S+Y+AAL LGI NQLTNILRDVGEDA RGR
Sbjct: 246 YMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGR 305
Query: 273 IYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPV 332
IYLPQDELA+ GL DEDIF+ V+++WR FMK QI RAR F++ AE G +EL +ASRWPV
Sbjct: 306 IYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFEEAERGVTELSQASRWPV 365
Query: 333 WTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
W L+LY++ILD I+ NDY+N TKR YVG KKL + AY R+
Sbjct: 366 WASLLLYRQILDEIEANDYNNFTKRTYVGKAKKLLALPVAYGRS 409
>TAIR|locus:2167225 [details] [associations]
symbol:PSY "PHYTOENE SYNTHASE" species:3702 "Arabidopsis
thaliana" [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA;IMP] [GO:0016767 "geranylgeranyl-diphosphate
geranylgeranyltransferase activity" evidence=ISS;TAS] [GO:0046905
"phytoene synthase activity" evidence=TAS] [GO:0006636 "unsaturated
fatty acid biosynthetic process" evidence=RCA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0010287
"plastoglobule" evidence=IDA] InterPro:IPR002060 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 EMBL:CP002688
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0010287
GO:GO:0016117 GO:GO:0016767 GO:GO:0046905 IPI:IPI00938978
RefSeq:NP_001154715.1 UniGene:At.23726 ProteinModelPortal:F4KGX7
SMR:F4KGX7 PRIDE:F4KGX7 EnsemblPlants:AT5G17230.3 GeneID:831587
KEGG:ath:AT5G17230 KO:K02291 OMA:ELKLYCY Uniprot:F4KGX7
Length = 437
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 183/299 (61%), Positives = 225/299 (75%)
Query: 93 LDEAYERCRKICAEYAKXXXXXXXXXXKERQKAIWAVYA---------------WCKRTD 137
L EAY+RC ++CAEYAK ER+KAIWA+Y WC+RTD
Sbjct: 128 LGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRRTD 187
Query: 138 ELVDGPNAFCVSPAALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGM 197
ELVDGPNA ++P ALDRWE RL+D+F G P D+LDAAL DTV+++ + I+PFRDMI+GM
Sbjct: 188 ELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGM 247
Query: 198 RMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQL 257
RMD +K RY NF +LYLYCYY GTVGLMSVPVMG+DP S A+ +S+YNAAL LGI NQL
Sbjct: 248 RMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQL 307
Query: 258 TNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLA 317
TNILRDVGEDA RGR+YLPQDELA+ GL DEDIF+ KV+D+WR FMK Q+ RAR F+ A
Sbjct: 308 TNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEA 367
Query: 318 EEGASELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
E+G +EL ASRWPVW L+LY++ILD I+ NDY+N TKRAYVG +KK+ + AY ++
Sbjct: 368 EKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 426
>UNIPROTKB|Q9UUQ6 [details] [associations]
symbol:CARRP "Bifunctional lycopene cyclase/phytoene
synthase" species:29924 "Mucor circinelloides f. lusitanicus"
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0045436 "lycopene
beta cyclase activity" evidence=IDA] [GO:0046905 "phytoene synthase
activity" evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872
GO:GO:0016117 GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767
GO:GO:0046905 EMBL:AJ250827 ProteinModelPortal:Q9UUQ6
Uniprot:Q9UUQ6
Length = 614
Score = 144 (55.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 59/242 (24%), Positives = 106/242 (43%)
Query: 149 SPAALDRWEERLQDIFNGH-PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYA 207
+P A+D W D +N P + A + T + L ++++ G + D E+
Sbjct: 363 APTAID-W-----DFYNDQLPASCISAFKSFTRLRHVLEAGAIKELLDGYKWDLERRSIR 416
Query: 208 NFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQS---IYNAALYLGIGNQLTNILRDV 264
+ ++L Y +VG M ++ D AS Q I A +G+ Q TNI RD+
Sbjct: 417 DQEDLRYYSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVLQYTNIARDI 476
Query: 265 GEDASR-GRIYLPQDELAKFGLR-DEDIFSRKVSDEWREFMKEQ-ITRARYFYKLAEEGA 321
D+ GR YLPQD L + + + +R++ +E + + I +A +A +G
Sbjct: 477 VTDSEELGRCYLPQDWLTEKEVALIQGGLAREIGEERLLSLSHRLIYQADELMVVANKGI 536
Query: 322 SELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSIST 381
+L + V +Y I ++ + + RA+VGN K++ + + Y +
Sbjct: 537 DKLPSHCQGGVRAACNVYASIGTKLKSYKH-HYPSRAHVGNSKRVEIALLSVYNLYTAPI 595
Query: 382 AT 383
AT
Sbjct: 596 AT 597
Score = 47 (21.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 122 RQKAIWAVYAWCKRTDELVD 141
RQ+ + +YA+C+ TD+L D
Sbjct: 315 RQE-LGVLYAFCRATDDLCD 333
>UNIPROTKB|P37295 [details] [associations]
symbol:al-2 "Bifunctional lycopene cyclase/phytoene
synthase" species:367110 "Neurospora crassa OR74A" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872
GO:GO:0016117 EMBL:AABX02000002 GO:GO:0045436 TIGRFAMs:TIGR03462
eggNOG:COG1562 GO:GO:0016767 GO:GO:0046905 EMBL:L27652
EMBL:BX842641 PIR:A53583 RefSeq:XP_965725.2 UniGene:Ncr.25908
ProteinModelPortal:P37295 STRING:P37295
EnsemblFungi:EFNCRT00000000733 GeneID:3881954 KEGG:ncr:NCU00585
OrthoDB:EOG4HQHST BioCyc:MetaCyc:MONOMER-16129 Uniprot:P37295
Length = 602
Score = 142 (55.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 55/207 (26%), Positives = 90/207 (43%)
Query: 188 KPFRDMIKGMRMDTE----------KCRY--ANFQELYLYCYYAGGTVGLMSVPVMGMD- 234
KP D+IKG MD++ +Y A+ ++L Y Y GTVG + + ++
Sbjct: 394 KPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCIALIIYHC 453
Query: 235 -PD-SSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFS 292
PD S + + AA +GI Q NI RD+ DA GR+YLP L K GL + +
Sbjct: 454 LPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGLTHKMVLE 513
Query: 293 RKVSDEWREFMKEQITRARY-FYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDND- 350
E E M+ ++ + Y A + +R P+ + Y I +++
Sbjct: 514 NPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGRVLRERKE 573
Query: 351 ---YDNLTKRAYVGNIKKLFLVRQAYY 374
+ + RA V ++L + +A Y
Sbjct: 574 GTVFVRMEGRATVPKRRRLSTLLRALY 600
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 129 VYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGHPND 170
+Y++C+ D+LVD S + W +L + H D
Sbjct: 316 LYSFCRLADDLVDDAK----SRREVLSWTAKLNHFLDLHYKD 353
>UNIPROTKB|Q7Z859 [details] [associations]
symbol:crtYB "Bifunctional lycopene cyclase/phytoene
synthase" species:5421 "Xanthophyllomyces dendrorhous" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767 GO:GO:0046905
EMBL:AJ133646 EMBL:AY174117 EMBL:AY177204 EMBL:DQ016503
ProteinModelPortal:Q7Z859 BioCyc:MetaCyc:MONOMER-17247
Uniprot:Q7Z859
Length = 673
Score = 118 (46.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 49/205 (23%), Positives = 84/205 (40%)
Query: 160 LQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYA 219
L ++ G+ D++ T+ V I+ D++ D C + EL +Y +A
Sbjct: 439 LDELLRGYTTDLIFPLSTEAVQARKTPIETTADLL-----DYGLCVAGSVAELLVYVSWA 493
Query: 220 GGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDE 279
S P P + +++ A+ +G QL NI RD+ DA+ GR YLP
Sbjct: 494 -------SAP--SQVPATIEEREAVLVASREMGTALQLVNIARDIKGDATEGRFYLP--- 541
Query: 280 LAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASR--WPVWTV-L 336
L+ FGLRDE + + +W E + + + +S ++ R W +++ L
Sbjct: 542 LSFFGLRDESKLA--IPTDWTEPRPQDFDKLLSLSPSSTLPSSNASESFRFEWKTYSLPL 599
Query: 337 ILYQKILDAIQDNDYDNLTKRAYVG 361
+ Y + L D L G
Sbjct: 600 VAYAEDLAKHSYKGIDRLPTEVQAG 624
Score = 69 (29.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 82 FRSKPQLDAMFLDEAYERCRKICAEYAKXXXXXXXXXXKERQKAIWAVYAWCKRTDELVD 141
F S+P D E K+ E ++ E ++ + +YA+C+ TD+L+D
Sbjct: 285 FSSRPYSSQPKRD--LELAVKLLEEKSRSFFVASAGFPSEVRERLVGLYAFCRVTDDLID 342
Query: 142 GPNAFCVSPAALDRWEERLQDIFNG--HPN 169
P A +D + L +F HP+
Sbjct: 343 SPEVSSNPHATIDMVSDFLTLLFGPPLHPS 372
>MGI|MGI:1924197 [details] [associations]
symbol:Ndufaf6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=ISO]
InterPro:IPR002060 Pfam:PF00494 MGI:MGI:1924197 GO:GO:0005739
GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981 eggNOG:COG1562
CTD:137682 GeneTree:ENSGT00510000048688 HOGENOM:HOG000146031
HOVERGEN:HBG080309 OMA:FDLYNDP OrthoDB:EOG4TQM9N EMBL:AL732497
IPI:IPI00341302 RefSeq:NP_001078962.1 UniGene:Mm.275265
ProteinModelPortal:A2AIL4 STRING:A2AIL4 PhosphoSite:A2AIL4
PaxDb:A2AIL4 PRIDE:A2AIL4 Ensembl:ENSMUST00000058183 GeneID:76947
KEGG:mmu:76947 UCSC:uc008ryx.1 InParanoid:A2AIL4 NextBio:346147
Bgee:A2AIL4 Genevestigator:A2AIL4 Uniprot:A2AIL4
Length = 333
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 49/233 (21%), Positives = 100/233 (42%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPNDILDAALTDT 179
E Q++ A+ A+ ++ D + + + W++ ++D++ + P+ + L
Sbjct: 82 ECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDMYCDNPPHQPVAIELWKA 141
Query: 180 VSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSA 239
V K NL + +I + + Y + QEL Y G++ +++ V+G+ D A
Sbjct: 142 VKKHNLTKRWLMRIIDEREKNLDDKAYRSMQELENYAENTQGSLLYLTLEVLGVK-DLHA 200
Query: 240 SAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEW 299
+AA ++G + LR +SR +++LP D + G+ ED R
Sbjct: 201 D-----HAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNV 255
Query: 300 REFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYD 352
R+ + + ++A K A + A +P + + + L IQ D+D
Sbjct: 256 RDVVYDIASQAHLHLKHARSFHRSVP-AEAFPAFLQTVSLEDYLKKIQRVDFD 307
>UNIPROTKB|Q60AN4 [details] [associations]
symbol:sqs "Squalene synthase" species:243233
"Methylococcus capsulatus str. Bath" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0019745 "pentacyclic triterpenoid biosynthetic process"
evidence=ISS] InterPro:IPR002060 InterPro:IPR019845 Pfam:PF00494
PROSITE:PS01044 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0019745 EMBL:AE017282
GenomeReviews:AE017282_GR KO:K00801 OMA:ELEEYCW GO:GO:0004310
RefSeq:YP_113313.1 ProteinModelPortal:Q60AN4 GeneID:3102259
KEGG:mca:MCA0813 PATRIC:22605424 HOGENOM:HOG000230420
ProtClustDB:CLSK644100 Uniprot:Q60AN4
Length = 362
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 175 ALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVM-GM 233
AL + V+ + + F+D K +R E R ++ YCYY G VG M +
Sbjct: 131 ALAECVATMSRGMAEFQD--KDLRHGLEDLR-----QMGDYCYYVAGVVGEMLTRLFCHY 183
Query: 234 DPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFG 284
P+ +A + A+ G G Q+TNIL+D+ +D +RG +LPQ+ + G
Sbjct: 184 SPEIAAHRSRLMELAVSFGQGLQMTNILKDLWDDHARGVCWLPQEVFTECG 234
>UNIPROTKB|A7YVD7 [details] [associations]
symbol:NDUFAF6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:9913 "Bos taurus" [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002060
Pfam:PF00494 GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981
eggNOG:COG1562 EMBL:BC123431 IPI:IPI00696259 RefSeq:NP_001098859.1
UniGene:Bt.14664 ProteinModelPortal:A7YVD7 STRING:A7YVD7
Ensembl:ENSBTAT00000009959 GeneID:523017 KEGG:bta:523017 CTD:137682
GeneTree:ENSGT00510000048688 HOGENOM:HOG000146031
HOVERGEN:HBG080309 InParanoid:A7YVD7 OMA:FDLYNDP OrthoDB:EOG4TQM9N
NextBio:20873646 Uniprot:A7YVD7
Length = 333
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 50/234 (21%), Positives = 99/234 (42%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGHP-NDILDAALTDT 179
E + + +A+ A+ ++ D + + + W++ + DI++ +P + + L
Sbjct: 82 ESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKKTVDDIYSDNPPHQPVAIELWKA 141
Query: 180 VSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSA 239
V + NL + +I + + Y N QEL Y ++ +++ ++G+ D A
Sbjct: 142 VRRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGIK-DLHA 200
Query: 240 SAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDE- 298
+AA ++G + LR SR R++LP D G+ ED F RK D
Sbjct: 201 D-----HAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQED-FLRKSQDRN 254
Query: 299 WREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYD 352
R+ + + ++A K A + +P + + + L IQ D+D
Sbjct: 255 VRDVVYDVASQAHLHLKHARSFHRSIP-VKAFPAFLQTVALEDYLKKIQQVDFD 307
>UNIPROTKB|Q9P854 [details] [associations]
symbol:carRA "Bifunctional lycopene cyclase/phytoene
synthase" species:763407 "Phycomyces blakesleeanus NRRL 1555(-)"
[GO:0016120 "carotene biosynthetic process" evidence=IMP]
[GO:0016767 "geranylgeranyl-diphosphate geranylgeranyltransferase
activity" evidence=IMP] [GO:0045436 "lycopene beta cyclase
activity" evidence=IMP] [GO:0046905 "phytoene synthase activity"
evidence=IMP] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767 GO:GO:0046905
EMBL:AJ278287 EMBL:AJ276965 ProteinModelPortal:Q9P854
Uniprot:Q9P854
Length = 602
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 65/280 (23%), Positives = 121/280 (43%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVS---PAALDR-WEERLQDIFNGHPNDI----L 172
E ++ + +Y +C+ TD+L D + L R + ++ D +GHP DI
Sbjct: 308 EARQDLGVLYGFCRATDDLADNNDVSVPDRKKQLELVRGFVRQMFDSKHGHP-DIDWTQY 366
Query: 173 DAALTDT-VSKFN--------LHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTV 223
++ D+ ++ F L IK +++ G D E+ N +L Y +V
Sbjct: 367 SGSIPDSFIAAFRSFTRLRDVLEIKAVEELLDGYTFDLEQREVKNEDDLVYYSACVASSV 426
Query: 224 GLMSVPV-MGMDPDSSASAQS-IYNAALYLGIGNQLTNILRDVGEDASR-GRIYLPQDEL 280
G M V M +P + + A +G+ QLTNI RD+ D+ + GR Y+P+D L
Sbjct: 427 GEMCTRVLMASEPGGNRTMLKWTVERARDMGLALQLTNIARDIVTDSKQLGRSYVPRDWL 486
Query: 281 AKFGLRDEDIF----SRKVSDE-WREFMKEQITRARYFYKLAEEGASELDKASRWPVWTV 335
++ + +R++ DE R+ + + A +A L +SR V
Sbjct: 487 TS---QESALLKAGKARELGDERLRQIALKMVYTADDLNLMASRAIDYLPPSSRCGVRAA 543
Query: 336 LILYQKI-LDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYY 374
+Y I + + N Y + RA++ ++++ + + Y
Sbjct: 544 CNVYTAIGVSLHKANGYPD---RAHLTKLERMKVTFRCVY 580
>RGD|1309085 [details] [associations]
symbol:Ndufaf6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;ISS] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032981 "mitochondrial respiratory
chain complex I assembly" evidence=ISO;ISS] InterPro:IPR002060
Pfam:PF00494 RGD:1309085 GO:GO:0009058 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0032981 EMBL:CH473984 CTD:137682 GeneTree:ENSGT00510000048688
OrthoDB:EOG4TQM9N EMBL:AABR03042038 EMBL:AABR03046646
IPI:IPI00366609 RefSeq:XP_001072347.1 RefSeq:XP_232684.3
UniGene:Rn.94436 PRIDE:D3ZN43 Ensembl:ENSRNOT00000061569
GeneID:297821 KEGG:rno:297821 UCSC:RGD:1309085 NextBio:642708
Uniprot:D3ZN43
Length = 333
Score = 123 (48.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 48/233 (20%), Positives = 99/233 (42%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPNDILDAALTDT 179
E Q++ A+ A+ ++ D + + + W + ++D+F + P+ + L
Sbjct: 82 ECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRKAVEDMFCDNPPHQPVAMELWKA 141
Query: 180 VSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSA 239
V + NL + +I + + Y + +EL Y ++ +++ V+G+ D A
Sbjct: 142 VKRHNLTKRWLLRIIDEREKNLDDKAYRSIRELETYAENTQSSLLYLTLEVLGVK-DVHA 200
Query: 240 SAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEW 299
+AA ++G + LR +SR +++LP D + G+ ED R
Sbjct: 201 D-----HAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNV 255
Query: 300 REFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYD 352
R+ + + ++A K A S + A +P + + + L IQ D+D
Sbjct: 256 RDVVYDIASQAHLHLKHARSFHSRVP-AEAFPAFLQTVSLEDYLKKIQRVDFD 307
>UNIPROTKB|F1PMK8 [details] [associations]
symbol:NDUFAF6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0032981 "mitochondrial respiratory
chain complex I assembly" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
InterPro:IPR002060 Pfam:PF00494 GO:GO:0009058 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0032981 CTD:137682 GeneTree:ENSGT00510000048688 OMA:FDLYNDP
EMBL:AAEX03015966 RefSeq:XP_535131.2 Ensembl:ENSCAFT00000014984
GeneID:477943 KEGG:cfa:477943 Uniprot:F1PMK8
Length = 334
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 50/234 (21%), Positives = 98/234 (41%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPNDILDAALTDT 179
E + + +A+ A+ ++ D + + + W++ + DI+ + P + L
Sbjct: 83 ESRSSAFALRAFNVELAQVKDSVSEKTIGLMRMAFWKKTVDDIYCDNPPQQPVALELWKA 142
Query: 180 VSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSA 239
V + NL + +I + + Y N QEL Y ++ +++ ++G+ D A
Sbjct: 143 VKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGVK-DLHA 201
Query: 240 SAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDE- 298
+AA ++G + LR SR R++LP D G+ ED F RK D+
Sbjct: 202 D-----HAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQED-FLRKNQDKN 255
Query: 299 WREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYD 352
R+ + + ++A K A + +P + + + L IQ D+D
Sbjct: 256 VRDVIYDIASQAHLHLKHARSFHKSVP-VKAFPAFLQTVALENYLKRIQQVDFD 308
>UNIPROTKB|Q330K2 [details] [associations]
symbol:NDUFAF6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:9606 "Homo sapiens" [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0032981 "mitochondrial respiratory chain complex I assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002060 Pfam:PF00494 GO:GO:0005634 GO:GO:0005737
EMBL:CH471060 GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981
Orphanet:255241 eggNOG:COG1562 MIM:252010 CTD:137682
HOGENOM:HOG000146031 HOVERGEN:HBG080309 OMA:FDLYNDP EMBL:AY444560
EMBL:AC087752 EMBL:BC028166 EMBL:AK298631 IPI:IPI00847930
IPI:IPI00852983 IPI:IPI00889748 RefSeq:NP_689629.2
UniGene:Hs.729144 ProteinModelPortal:Q330K2 STRING:Q330K2
PhosphoSite:Q330K2 DMDM:182676420 PaxDb:Q330K2 PRIDE:Q330K2
DNASU:137682 Ensembl:ENST00000396111 Ensembl:ENST00000396113
Ensembl:ENST00000396124 Ensembl:ENST00000518258
Ensembl:ENST00000523337 Ensembl:ENST00000542894 GeneID:137682
KEGG:hsa:137682 UCSC:uc003yhi.3 UCSC:uc003yhj.3
GeneCards:GC08P095909 HGNC:HGNC:28625 HPA:HPA047148 HPA:HPA050545
MIM:612392 neXtProt:NX_Q330K2 PharmGKB:PA142672357
InParanoid:Q330K2 GenomeRNAi:137682 NextBio:83659
ArrayExpress:Q330K2 Bgee:Q330K2 CleanEx:HS_C8orf38
Genevestigator:Q330K2 Uniprot:Q330K2
Length = 333
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 44/233 (18%), Positives = 97/233 (41%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPNDILDAALTDT 179
E + +++A+ A+ ++ D + + + W++ ++DI+ + P+ + L
Sbjct: 82 ESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDIYCDNPPHQPVAIELWKA 141
Query: 180 VSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSA 239
V + NL + ++ + + Y N +EL Y ++ +++ ++G+ D A
Sbjct: 142 VKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIK-DLHA 200
Query: 240 SAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEW 299
+AA ++G + LR SR +++LP D G+ ED R
Sbjct: 201 D-----HAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQDKNV 255
Query: 300 REFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYD 352
R+ + + ++A K A + +P + + + L IQ D+D
Sbjct: 256 RDVIYDIASQAHLHLKHARSFHKTVP-VKAFPAFLQTVSLEDFLKKIQRVDFD 307
>UNIPROTKB|F1RY58 [details] [associations]
symbol:NDUFAF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032981 "mitochondrial respiratory chain complex I
assembly" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA] InterPro:IPR002060
Pfam:PF00494 GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981
GeneTree:ENSGT00510000048688 OMA:FDLYNDP EMBL:CU467033
Ensembl:ENSSSCT00000006684 Uniprot:F1RY58
Length = 336
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 49/234 (20%), Positives = 97/234 (41%)
Query: 121 ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPNDILDAALTDT 179
E + + +A+ A+ ++ D + + + W++ + DI+ + P+ + L
Sbjct: 82 ESRSSAFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVDDIYCDSPPHQPVAIELWKA 141
Query: 180 VSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSA 239
V + NL + +I + + Y N QEL Y ++ +++ ++
Sbjct: 142 VKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILETIGVKDL 201
Query: 240 SAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDE- 298
A +AA ++G + LR SR R++LP D G+ ED F RK D+
Sbjct: 202 HAD---HAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQED-FLRKSQDKN 257
Query: 299 WREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYD 352
R+ + + ++A K A + A +P + + + L IQ D+D
Sbjct: 258 VRDVVYDIASQAHLHLKHARSFHKSVP-AKAFPAFLQTVALEDYLKKIQQVDFD 310
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 384 374 0.00087 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 618 (66 KB)
Total size of DFA: 254 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.56u 0.22s 27.78t Elapsed: 00:00:01
Total cpu time: 27.56u 0.22s 27.78t Elapsed: 00:00:01
Start: Mon May 20 21:52:34 2013 End: Mon May 20 21:52:35 2013