BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016696
(384 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P37271|PSY_ARATH Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1
PE=2 SV=2
Length = 422
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 191/285 (67%), Positives = 235/285 (82%)
Query: 92 FLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPA 151
L EAY+RC ++CAEYAKT+YLGTLL+T ER+KAIWA+Y WC+RTDELVDGPNA ++P
Sbjct: 127 LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPM 186
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
ALDRWE RL+D+F G P D+LDAAL DTV+++ + I+PFRDMI+GMRMD +K RY NF +
Sbjct: 187 ALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDD 246
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRG 271
LYLYCYY GTVGLMSVPVMG+DP S A+ +S+YNAAL LGI NQLTNILRDVGEDA RG
Sbjct: 247 LYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRG 306
Query: 272 RIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWP 331
R+YLPQDELA+ GL DEDIF+ KV+D+WR FMK Q+ RAR F+ AE+G +EL ASRWP
Sbjct: 307 RVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWP 366
Query: 332 VWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
VW L+LY++ILD I+ NDY+N TKRAYVG +KK+ + AY ++
Sbjct: 367 VWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKS 411
>sp|P37272|PSY_CAPAN Phytoene synthase, chloroplastic OS=Capsicum annuum GN=PSY1 PE=2
SV=1
Length = 419
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 195/292 (66%), Positives = 239/292 (81%)
Query: 92 FLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPA 151
L EAY+RC ++CAEYAKT+YLGT+L+T ER+KAIWA+Y WC+RTDELVDGPNA ++PA
Sbjct: 128 LLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPA 187
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
ALDRWE+RL+D+F+G P D+LDAAL+DTVSKF + I+PFRDMI+GMRMD K RY NF E
Sbjct: 188 ALDRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDE 247
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRG 271
LYLYCYY GTVGLMSVP+MG+ P+S A+ +S+YNAAL LGI NQLTNILRDVGEDA RG
Sbjct: 248 LYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRG 307
Query: 272 RIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWP 331
R+YLPQDELA+ GL DEDIF+ +V+D+WR FMK+QI RAR F+ AE+G +EL ASRWP
Sbjct: 308 RVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSAASRWP 367
Query: 332 VWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSISTAT 383
V L+LY++ILD I+ NDY+N TKRAYV KKL + AY ++ ST T
Sbjct: 368 VLASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAKSLVPSTRT 419
>sp|P08196|PSY1_SOLLC Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1
PE=1 SV=2
Length = 412
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/345 (58%), Positives = 255/345 (73%), Gaps = 5/345 (1%)
Query: 44 SIILPRLSTQGMLQSDVHICEIAERQS-LANNLSDKGDAFRSKPQL----DAMFLDEAYE 98
S IL S + + S+ + ++ RQ+ L + KP + + L EAY+
Sbjct: 63 SAILATPSGERTMTSEQMVYDVVLRQAALVKRQLRSTNELEVKPDIPIPGNLGLLSEAYD 122
Query: 99 RCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEE 158
RC ++CAEYAKT+ LGT+L+T ER++AIWA+Y WC+RTDELVDGPNA ++PAALDRWE
Sbjct: 123 RCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPAALDRWEN 182
Query: 159 RLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYY 218
RL+D+FNG P D+LD AL+DTVS F + I+PFRDMI+GMRMD K RY NF ELYLYCYY
Sbjct: 183 RLEDVFNGRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYY 242
Query: 219 AGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQD 278
GTVGLMSVP+MG+ P+S A+ +S+YNAAL LGI NQLTNILRDVGEDA RGR+YLPQD
Sbjct: 243 VAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQD 302
Query: 279 ELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLIL 338
ELA+ GL DEDIF+ +V+D+WR FMK+QI RAR F+ AE+G +EL ASR+PVW L+L
Sbjct: 303 ELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSASRFPVWASLVL 362
Query: 339 YQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSISTAT 383
Y+KILD I+ NDY+N TKRAYV KKL + AY ++ T T
Sbjct: 363 YRKILDEIEANDYNNFTKRAYVSKSKKLIALPIAYAKSLVPPTKT 407
>sp|P49293|PSY_CUCME Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1
Length = 422
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/286 (67%), Positives = 232/286 (81%), Gaps = 1/286 (0%)
Query: 92 FLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPA 151
L+EAY+RC ++CAEYAKT+YLGT+L+T ERQKAIWA+Y WC+RTDELVDGPNA ++P
Sbjct: 132 LLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPT 191
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
ALDRWE RL+++F G P D+LDAAL DTV+KF + I+PF+DMI+GMRMD K RY NF E
Sbjct: 192 ALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDE 251
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQL-TNILRDVGEDASR 270
LYLYCYY GTVGLMSVPVMG+ P+S AS +S+YNAAL LGI NQ NILRDVGEDA R
Sbjct: 252 LYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGEDARR 311
Query: 271 GRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRW 330
GRIYLPQDELA+ GL DEDIF+ +V+D+WR FMK QI RAR F+ AE+G EL+KASRW
Sbjct: 312 GRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASRW 371
Query: 331 PVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
PVW L+LY++ILD I+ NDYDN TKRAYV KK+ + AY RA
Sbjct: 372 PVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRA 417
>sp|P53797|PSY_NARPS Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus
GN=PSY PE=2 SV=1
Length = 423
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/282 (66%), Positives = 233/282 (82%)
Query: 92 FLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPA 151
L +AY+RC ++CAEYAKT+YLGTLL+T ER++AIWA+Y WC+RTDELVDG NA ++P+
Sbjct: 124 LLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPS 183
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
ALDRWE RL+D+F G P D+ DAAL+DTVS+F + I+PF DM++GMRMD +K RY NF E
Sbjct: 184 ALDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDE 243
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRG 271
LYLYCYY GTVGLMSVPVMG+ P+S A A+S+YNAAL LGI NQLTNILRDVGEDA RG
Sbjct: 244 LYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDARRG 303
Query: 272 RIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWP 331
RIYLPQDELA+ GL DED+F+ KV+D+WR FMK QI RAR F++ AE+G +EL +ASRWP
Sbjct: 304 RIYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWP 363
Query: 332 VWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAY 373
VW L+LY++ILD I+ NDY+N TKRAYV +K+L + AY
Sbjct: 364 VWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAY 405
>sp|P37273|PSY2_SOLLC Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum
lycopersicum GN=PSY2 PE=2 SV=1
Length = 310
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/285 (67%), Positives = 234/285 (82%)
Query: 92 FLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPA 151
L EAY+RC ++CAEYAKT+YLGT+L+T +R++AIWA+Y WC+RTDELVDGPNA ++P
Sbjct: 12 LLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITPQ 71
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
ALDRWE RL+DIFNG P D+LDAAL+DTVS+F + I+PFRDM++GMRMD K RY NF E
Sbjct: 72 ALDRWEARLEDIFNGRPFDMLDAALSDTVSRFPVDIQPFRDMVEGMRMDLWKSRYNNFDE 131
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRG 271
LYLYCYY GTVGLMSVP+MG+ P+S A+ +S+YNAAL LGI NQLTNILRDVGEDA RG
Sbjct: 132 LYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRG 191
Query: 272 RIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWP 331
R+YLPQDELA+ GL DEDIF+ KV+D+WR FMK+QI RAR F+ AE+G +EL ASRWP
Sbjct: 192 RVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIQRARKFFDEAEKGVTELSSASRWP 251
Query: 332 VWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
V L+LY+KILD I+ NDY+N T+RAYV KKL + AY R+
Sbjct: 252 VLASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYARS 296
>sp|P49085|PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1
Length = 410
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/281 (66%), Positives = 229/281 (81%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
L EAY+RC +IC EYAKT+YLGT+L+T+ER++AIWA+Y WC+RTDELVDGPNA ++P A
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174
Query: 153 LDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQEL 212
LDRWE+RL+D+F G P D+LDAAL+DT+S+F + I+PFRDMI+GMR D K RY NF EL
Sbjct: 175 LDRWEKRLEDLFTGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNFDEL 234
Query: 213 YLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGR 272
Y+YCYY GTVGLMSVPVMG+ +S A+ +S+Y+AAL LGI NQLTNILRDVGEDA RGR
Sbjct: 235 YMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDARRGR 294
Query: 273 IYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPV 332
IYLPQDELA+ GL DEDIF V++ WR FMK QI RAR F++ AE G +EL +ASRWPV
Sbjct: 295 IYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVNELSQASRWPV 354
Query: 333 WTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAY 373
W L+LY++ILD I+ NDY+N TKRAYVG KKL + AY
Sbjct: 355 WASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395
>sp|Q9SSU8|PSY_DAUCA Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1
Length = 398
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/285 (65%), Positives = 228/285 (80%)
Query: 92 FLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPA 151
L+EAY+RC ++CAEYAKT+YLGTLL+T ER++A+WA+Y WC+RTDELVDGPNA ++P
Sbjct: 106 LLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPK 165
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
ALDRWE+RL D+F+G P D+ DAAL DTVS + + I+PF+DMI GMRMD +K RY F E
Sbjct: 166 ALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDMIDGMRMDLKKSRYQTFDE 225
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRG 271
LYLYCYY GTVGLMSVPVMG+ P+S A+ +S+Y+AAL LGI NQLTNILRDVGEDA RG
Sbjct: 226 LYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRG 285
Query: 272 RIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWP 331
RIYLPQ+EL G+ E IF KV+D+WR FMK QI RAR F+ AE+G +EL ASRWP
Sbjct: 286 RIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSASRWP 345
Query: 332 VWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
VW L+LY++ILDAI+ NDYDN TKRAYVG KKL + AY RA
Sbjct: 346 VWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSLPLAYSRA 390
>sp|O07333|CRTY_SPIPL Phytoene synthase OS=Spirulina platensis GN=crtB PE=3 SV=1
Length = 309
Score = 321 bits (822), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 201/292 (68%), Gaps = 7/292 (2%)
Query: 95 EAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALD 154
++YE CR+I A+YAKT+YLGT L+ +++AIWA+Y WC+RTDELVDGP A + LD
Sbjct: 18 DSYELCRQITAQYAKTFYLGTQLMPLAKRQAIWAIYVWCRRTDELVDGPMASSTTLETLD 77
Query: 155 RWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYL 214
WEE+L+ IF GHP + +D AL DT+ +F L I+PFRDMI G RMD + RY F EL L
Sbjct: 78 HWEEQLESIFAGHPIEPVDVALVDTLGRFPLDIQPFRDMIAGQRMDLSRNRYNTFDELNL 137
Query: 215 YCYYAGGTVGLMSVPVMGM-DPDSSAS---AQSIY---NAALYLGIGNQLTNILRDVGED 267
YCY GTVGLMS+ VMG +PD S QSIY A+ LGI NQLTNILRDVGED
Sbjct: 138 YCYRVAGTVGLMSLAVMGTAEPDLSVPWNRDQSIYYPKEEAIALGIANQLTNILRDVGED 197
Query: 268 ASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKA 327
A RGRIYLP D+LA F + D+ + KV + WRE M+ QI RAR FY LAEEG + L
Sbjct: 198 ARRGRIYLPLDDLALFNYTEADLLNGKVDERWRELMRFQIQRARKFYTLAEEGIAALHPD 257
Query: 328 SRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSI 379
RWPVWT L+LY++ILD I+ N+YD +RAYV KK+ + A RA+ +
Sbjct: 258 IRWPVWTALMLYRQILDEIERNEYDVFNQRAYVPTWKKMMCLPLAQLRARVL 309
>sp|P37269|CRTB_SYNE7 Phytoene synthase OS=Synechococcus elongatus (strain PCC 7942)
GN=crtB PE=3 SV=2
Length = 308
Score = 320 bits (821), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 156/299 (52%), Positives = 205/299 (68%), Gaps = 6/299 (2%)
Query: 84 SKPQLDAMFLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGP 143
++P L EAYE CR+I A YAKT+YLGTLL+ + +++AIWA+Y WC+RTDELVDGP
Sbjct: 7 ARPSRALASLSEAYEECRQITARYAKTFYLGTLLMPEAKRQAIWAIYVWCRRTDELVDGP 66
Query: 144 NAFCVSPAALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
A + A LD WE RL+ +F G P D D AL DT++++ L I+PFRDMI+G RMD +
Sbjct: 67 QAAQTNFATLDAWERRLERLFAGEPEDDCDVALVDTLARYPLDIQPFRDMIEGQRMDLLQ 126
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSAS------AQSIYNAALYLGIGNQL 257
RY+ F++LY YCY GTVGLMS PVMG++ +S + AL LGI NQL
Sbjct: 127 NRYSTFEDLYTYCYRVAGTVGLMSQPVMGIESTNSRAPWDPTTPPDPTQEALALGIANQL 186
Query: 258 TNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLA 317
TNILRDVGEDA RGRIYLPQ+ELA+F ++D+F+ + D WR FM+ Q+ RAR +++ A
Sbjct: 187 TNILRDVGEDARRGRIYLPQEELAQFNYSEQDLFNGVIDDRWRAFMQFQLDRARDYFEQA 246
Query: 318 EEGASELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRA 376
E G +L +RWPVW L+LY++ILD I+ N+YD KRAYV +KL + A RA
Sbjct: 247 ERGIRQLSHDARWPVWASLMLYREILDVIEQNNYDVFRKRAYVPTWRKLCSLPVAMLRA 305
>sp|P37294|CRTB_SYNY3 Phytoene synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=crtB PE=3 SV=1
Length = 337
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 198/296 (66%), Gaps = 12/296 (4%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
++EAYE CR++ A+YAKT+YLGTLL+ +++AIWA+Y WC+RTDELVDGP A +P
Sbjct: 45 VEEAYEICRQVTAQYAKTFYLGTLLMPPAKRRAIWAIYLWCRRTDELVDGPQAATTTPET 104
Query: 153 LDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQEL 212
LD WE RL+ IF G P D D AL DT+ F L I+PFRDMI G RMD + RY F+EL
Sbjct: 105 LDHWERRLEGIFAGQPQDDADVALVDTLETFPLDIQPFRDMIAGQRMDLYRSRYQTFEEL 164
Query: 213 YLYCYYAGGTVGLMSVPVMGMD---------PDSSASAQSIYNAALYLGIGNQLTNILRD 263
LYCY GTVGLMS V+G+D PD+ Q A+ LG+ NQLTNILRD
Sbjct: 165 DLYCYRVAGTVGLMSSAVLGVDTGNGQAPWQPDAVYIPQE---EAIALGVANQLTNILRD 221
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RGRIYLP ++L +F ++D+ + D WR MK +I RAR++++ AE G
Sbjct: 222 VGEDVERGRIYLPLEDLERFNYSEQDLLNGVNDDRWRSLMKFEIDRARHYFEDAERGIRA 281
Query: 324 LDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSI 379
L++ +RWPVWT L+LY+ ILD I+ N+Y+ +RAYV KKL + A+ RAQ +
Sbjct: 282 LNRDARWPVWTALMLYKGILDVIEANNYNVFNRRAYVPTPKKLLYLPVAWLRAQVL 337
>sp|P37270|CRTB_THET2 Phytoene synthase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=crtB PE=3 SV=1
Length = 289
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 11/276 (3%)
Query: 102 KICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQ 161
++ ++ T+YLG+LL KE +K WAVYA C+ DE VDG P AL+ W ++
Sbjct: 16 RVLRAHSATFYLGSLLFPKEARKGAWAVYAACRLGDEAVDGEGG---GPEALEAWWAGVE 72
Query: 162 DIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGG 221
+ G P + L + ++++ + F M +G D R EL YCY G
Sbjct: 73 RAYRGRPLAEWEKGLAWALERWDIPFEAFLHMREGFLTDLGPVRLGTEAELLRYCYQVAG 132
Query: 222 TVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELA 281
TVG M P+ G ++ A A + LG QLTNILRDVGED R R+YLP D L
Sbjct: 133 TVGRMMAPIAGGGKEAEARA-------VKLGQAMQLTNILRDVGEDLERDRVYLPLDLLR 185
Query: 282 KFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQK 341
G+ ED+ + +V+ +R M +AR Y+ G L K R + + Y+
Sbjct: 186 AHGVEVEDLRAGRVTPGYRALMAHLEGKARALYREGLAGLGHL-KVGRAAIALAALQYRG 244
Query: 342 ILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQ 377
ILD ++ + YDNL +RA++ ++ L+ +A+ A+
Sbjct: 245 ILDKLRLSGYDNLGRRAHLKAWERALLLPKAFLAAR 280
>sp|P54977|CRTB_STRGR Phytoene synthase OS=Streptomyces griseus GN=crtB PE=3 SV=1
Length = 342
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 12/270 (4%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD---GPNAFCVS 149
L AY RCR + A + KTY+L T LL +R+ A+ A+Y + + D++VD P
Sbjct: 16 LRAAYTRCRGLNARHGKTYFLATRLLPVDRRPAVHALYGFARWADDIVDDLDTPATPGER 75
Query: 150 PAALDRWEERLQDIFNG-HPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYAN 208
AL E +L+ G + + AL DT +++ + + F D + MR D YA+
Sbjct: 76 ARALLGLEAQLEAGLRGARAAEPVIRALADTAARYTIDHRHFTDFLSSMRSDLTVGGYAS 135
Query: 209 FQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDA 268
++EL Y + + +GL +PV+G + + + A LG+ QLTN LRDVGED
Sbjct: 136 YEELGRYMHGSAAVIGLQMLPVLG----TVVAREEAAPHAAALGVAFQLTNFLRDVGEDL 191
Query: 269 SRGRIYLPQDELAKFGL-RDEDIFSRKVS---DEWREFMKEQITRARYFYKLAEEGASEL 324
RGR+YLP + LA G RD +SR + ++ R Y+ A G + L
Sbjct: 192 DRGRLYLPTELLAAHGADRDRFEWSRSTGMPDSRITDVLRAAAAHNRAVYRAALPGIAML 251
Query: 325 DKASRWPVWTVLILYQKILDAIQDNDYDNL 354
SR + T +LY ILDAI+ + Y L
Sbjct: 252 APVSRPCIRTAFVLYSGILDAIEADGYAVL 281
>sp|P65860|CRTB_MYCTU Probable phytoene synthase OS=Mycobacterium tuberculosis GN=crtB
PE=3 SV=1
Length = 302
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
+++AY I A+ +Y G LL +E++ A+ AVYA +R D++ DG A
Sbjct: 4 IEQAYRITESITRTAARNFYYGIRLLPREKRAALSAVYALGRRIDDVADGELAPETKITE 63
Query: 153 LDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQEL 212
LD + L +I + +D + AL D +F + I F ++I G RM+ + +F EL
Sbjct: 64 LDAIRKSLDNIDDS--SDPVLVALADAARRFPVPIAMFAELIDGARMEIDWTGCRDFDEL 121
Query: 213 YLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGR 272
+YC GT+G + + + G P S+A+++ A LGI Q TNILRDV ED GR
Sbjct: 122 IVYCRRGAGTIGKLCLSIFG--PVSTATSRY----AEQLGIALQQTNILRDVREDFLNGR 175
Query: 273 IYLPQDELAKFGLR 286
IYLP+DEL + G+R
Sbjct: 176 IYLPRDELDRLGVR 189
>sp|P65861|CRTB_MYCBO Probable phytoene synthase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=crtB PE=3 SV=1
Length = 302
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
+++AY I A+ +Y G LL +E++ A+ AVYA +R D++ DG A
Sbjct: 4 IEQAYRITESITRTAARNFYYGIRLLPREKRAALSAVYALGRRIDDVADGELAPETKITE 63
Query: 153 LDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQEL 212
LD + L +I + +D + AL D +F + I F ++I G RM+ + +F EL
Sbjct: 64 LDAIRKSLDNIDDS--SDPVLVALADAARRFPVPIAMFAELIDGARMEIDWTGCRDFDEL 121
Query: 213 YLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGR 272
+YC GT+G + + + G P S+A+++ A LGI Q TNILRDV ED GR
Sbjct: 122 IVYCRRGAGTIGKLCLSIFG--PVSTATSRY----AEQLGIALQQTNILRDVREDFLNGR 175
Query: 273 IYLPQDELAKFGLR 286
IYLP+DEL + G+R
Sbjct: 176 IYLPRDELDRLGVR 189
>sp|Q4L976|CRTM_STAHJ Dehydrosqualene synthase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtM PE=3 SV=1
Length = 285
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 8/280 (2%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD-GPNAFCVSPA 151
L+E Y+ C +I +Y+K++ +L +++++AIWA+YA C+ D+ +D + +
Sbjct: 4 LEENYQYCHQIMKDYSKSFSYAFDMLPEQQRRAIWAIYAVCRIVDDSIDVHQDVEYLHKI 63
Query: 152 ALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
D Q +D + A D + F ++ + D+I + D + +
Sbjct: 64 NRDVKAIEHQTTTTFESDDRIMTAFADAATHFQMNFQALYDLIDTVEADQHFEMFETDRG 123
Query: 212 LYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRG 271
L YCY GTVG++ +P++ P A Y LG QLTNILRDVGED G
Sbjct: 124 LLDYCYGVAGTVGVLLIPILATPPSDEA-----YEYGKQLGEALQLTNILRDVGEDYRNG 178
Query: 272 RIYLPQDELAKFGLRDEDIFSR-KVSDEWREFMKEQITRARYFYKLAEEGASELDKASRW 330
RIY + L +F + D R ++SD + + + T A Y + ++ SR
Sbjct: 179 RIYFSKARLNEFNVSIADEIERDQLSDNYIKIWEFYATLADNNYDMVLNHLDVYNEESRM 238
Query: 331 PVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVR 370
+ +Y+ IL ++ DY +L RAYV KK + R
Sbjct: 239 IIELAAQVYRGILTEVRKADY-SLKDRAYVSKWKKHKIYR 277
>sp|P54905|CRTB_RHOS4 Phytoene synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=crtB PE=3 SV=2
Length = 355
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 17/278 (6%)
Query: 100 CRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGP-------NAFCVSPAA 152
CR++ + +++ + LL + + A+YA+C+ D+ VD V A
Sbjct: 10 CREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREEDAEVKRRA 69
Query: 153 LDRWEERLQDIFNGHP-NDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQE 211
+ +RL ++ G P N D A V +F + +++G+ D Y +F
Sbjct: 70 VLSLRDRLDLVYGGRPRNAPADRAFAAVVEEFEMPRALPEALLEGLAWDAVGRSYDSFSG 129
Query: 212 LYLYCYYAGGTVGLMSVPVMGM-DPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASR 270
+ Y VG M +M + DPD + A LG+ QLTNI RDVG DA
Sbjct: 130 VLDYSARVAAAVGAMMCVLMRVRDPD-------VLARACDLGLAMQLTNIARDVGTDARS 182
Query: 271 GRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRAR-YFYKLAEEGASELDKASR 329
GRIYLP+D + + GL E+ +R V D+ + ++ RA Y +E G L A R
Sbjct: 183 GRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRLLRAADRLYLRSEAGVCGLPLACR 242
Query: 330 WPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLF 367
++ +Y I D I N YD++T+RA+ +KL
Sbjct: 243 PGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLV 280
>sp|P17056|CRTB_RHOCB Phytoene synthase OS=Rhodobacter capsulatus (strain ATCC BAA-309 /
NBRC 16581 / SB1003) GN=crtB PE=3 SV=1
Length = 339
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 10/293 (3%)
Query: 91 MFLDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSP 150
M + E CR++ + +++ + +L + A+YA+C+ D+ VD A
Sbjct: 1 MIAEADMEVCRELIRTGSYSFHAASRVLPARVRDPALALYAFCRVADDEVDEVGAPRDKA 60
Query: 151 AALDRWEERLQDIFNGHP-NDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANF 209
AA+ + +RL+DI+ G P N D A V +F + + +++G D E Y
Sbjct: 61 AAVLKLGDRLEDIYAGRPRNAPSDRAFAAVVEEFEMPRELPEALLEGFAWDAEGRWYHTL 120
Query: 210 QELYLYCYYAGGTVGLMSVPVMGM-DPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDA 268
++ Y VG M +M + +PD+ A A LG+ Q++NI RDVGEDA
Sbjct: 121 SDVQAYSARVAAAVGAMMCVLMRVRNPDALARACD-------LGLAMQMSNIARDVGEDA 173
Query: 269 SRGRIYLPQDELAKFGLRDEDIFS-RKVSDEWREFMKEQITRARYFYKLAEEGASELDKA 327
GR++LP D + + G+ + + + + R + + RA Y A G L
Sbjct: 174 RAGRLFLPTDWMVEEGIDPQAFLADPQPTKGIRRVTERLLNRADRLYWRAATGVRLLPFD 233
Query: 328 SRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSIS 380
R + +Y I + YDN+T+RA+ +KL+LV + A + S
Sbjct: 234 CRPGIMAAGKIYAAIGAEVAKAKYDNITRRAHTTKGRKLWLVANSAMSATATS 286
>sp|P21683|CRTB_PANAN Phytoene synthase OS=Pantoea ananas GN=crtB PE=3 SV=2
Length = 309
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 15/271 (5%)
Query: 108 AKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPN-AFCVSPAALDRWEERL------ 160
+K++ + L + ++++ +YAWC+ D+++D F AL E+RL
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRLMQLEMK 77
Query: 161 --QDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYY 218
Q ++ AA + ++ D ++G MD + +Y+ + YCY+
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVREAQYSQLDDTLRYCYH 137
Query: 219 AGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQD 278
G VGLM +MG+ +++ + A LG+ QLTNI RD+ +DA GR YLP
Sbjct: 138 VAGVVGLMMAQIMGVRDNAT------LDRACDLGLAFQLTNIARDIVDDAHAGRCYLPAS 191
Query: 279 ELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLIL 338
L GL E+ + + + + A +Y A G + L S W + T +
Sbjct: 192 WLEHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSATAGLAGLPLRSAWAIATAKQV 251
Query: 339 YQKILDAIQDNDYDNLTKRAYVGNIKKLFLV 369
Y+KI ++ +R +KL L+
Sbjct: 252 YRKIGVKVEQAGQQAWDQRQSTTTPEKLTLL 282
>sp|Q8NUQ5|CRTM_STAAW Dehydrosqualene synthase OS=Staphylococcus aureus (strain MW2)
GN=crtM PE=3 SV=1
Length = 287
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q6G6B2|CRTM_STAAS Dehydrosqualene synthase OS=Staphylococcus aureus (strain MSSA476)
GN=crtM PE=3 SV=1
Length = 287
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|O07854|CRTM_STAAE Dehydrosqualene synthase OS=Staphylococcus aureus (strain Newman)
GN=crtM PE=3 SV=3
Length = 287
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q5HCY8|CRTM_STAAC Dehydrosqualene synthase OS=Staphylococcus aureus (strain COL)
GN=crtM PE=3 SV=1
Length = 287
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q2FV59|CRTM_STAA8 Dehydrosqualene synthase OS=Staphylococcus aureus (strain NCTC
8325) GN=crtM PE=1 SV=1
Length = 287
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q2FDU5|CRTM_STAA3 Dehydrosqualene synthase OS=Staphylococcus aureus (strain USA300)
GN=crtM PE=3 SV=1
Length = 287
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q7A3E1|CRTM_STAAN Dehydrosqualene synthase OS=Staphylococcus aureus (strain N315)
GN=crtM PE=3 SV=1
Length = 287
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED R+Y + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q99R75|CRTM_STAAM Dehydrosqualene synthase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtM PE=1 SV=1
Length = 287
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED R+Y + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFQD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|A9JQL9|CRTM_STAAU Dehydrosqualene synthase OS=Staphylococcus aureus GN=crtM PE=1 SV=1
Length = 287
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDIFNGHPNDI--------LDAALTDTVSKFNLHIKPFRDMIKGMRMDTE 202
L++ +E +Q I +P + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSI-EKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQH 116
Query: 203 KCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILR 262
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILR
Sbjct: 117 FTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILR 171
Query: 263 DVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGAS 322
DVGED RIY + L ++ + +++ V++ + I Y+ +AE+
Sbjct: 172 DVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFR 224
Query: 323 E-LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+ +D+ + + I +Y +ILD ++ +Y L +R +V KK
Sbjct: 225 DVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 273
>sp|P55350|Y4AC_RHISN Putative phytoene synthase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00440 PE=3 SV=1
Length = 279
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 110 TYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGHPN 169
++YLG L +++AI+ +Y++C++ D++ D AAL +W + + ++ P
Sbjct: 19 SFYLGMRTLPPVQREAIFQIYSFCRQVDDIADSDEPREHRLAALQQWRDHIDALYQCVPP 78
Query: 170 DILDAALTDTVSKFNLHIKPFRDMIKGMRMDT-EKCRYANFQELYLYCYYAGGTVGLMSV 228
L L +V+ F L + F ++ GM MD + R L LYC VG MSV
Sbjct: 79 PRLKDYLA-SVTTFGLKREDFLAVVDGMEMDVLQDIRAPKMATLDLYCDRVASAVGRMSV 137
Query: 229 PVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDE 288
V G+ S + A +LG QLTNILRD+ EDA GR+Y+P++ L G+
Sbjct: 138 RVFGL------SEEDGIALAHHLGRALQLTNILRDIDEDAGLGRLYIPRESLDHAGITSS 191
Query: 289 D 289
D
Sbjct: 192 D 192
>sp|Q2YWE7|CRTM_STAAB Dehydrosqualene synthase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtM PE=3 SV=1
Length = 287
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 35/289 (12%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD--GPNAFCVSP 150
+D ++ C KI +++K++ LL ++++KA+WA+YA C++ D+ +D G F
Sbjct: 4 MDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQF---- 59
Query: 151 AALDRWEERLQDI----FNGH---PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L++ +E +Q I + H + + AL N+ + F ++I + D
Sbjct: 60 --LNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 117
Query: 204 CRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRD 263
+ EL+ YCY GTVG + P++ S Y+ A LG QL NILRD
Sbjct: 118 TMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRD 172
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
VGED RIY + L ++ + +++ V++ + I Y+ +AE+ +
Sbjct: 173 VGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHY-------IDLWEYYAAIAEKDFRD 225
Query: 324 -LDKASRWPVWTVLI------LYQKILDAIQDNDYDNLTKRAYVGNIKK 365
+D+ + + I +Y +ILD ++ Y L +R +V KK
Sbjct: 226 VMDQIKVFSIEAQPIIELAARIYIEILDEVRQASY-TLHERVFVYKRKK 273
>sp|P22872|CRTB_ESCVU Phytoene synthase OS=Escherichia vulneris GN=crtB PE=3 SV=1
Length = 309
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 105 AEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDG-PNAFCVSPAALDRWEERLQDI 163
A +K++ L ++++ +Y WC+ D+++D + F AA + +RL +
Sbjct: 15 ANGSKSFATAAKLFDPATRRSVLMLYTWCRHCDDVIDDQTHGFASEAAAEEEATQRLARL 74
Query: 164 -------FNG-HPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLY 215
F G D AA + + + D + G MD + RY F++ Y
Sbjct: 75 RTLTLAAFEGAEMQDPAFAAFQEVALTHGITPRMALDHLDGFAMDVAQTRYVTFEDTLRY 134
Query: 216 CYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYL 275
CY+ G VGLM VMG+ + + + A LG+ QLTNI RD+ +DA+ R YL
Sbjct: 135 CYHVAGVVGLMMARVMGV------RDERVLDRACDLGLAFQLTNIARDIIDDAAIDRCYL 188
Query: 276 PQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTV 335
P + L GL E+ +R+ + I A +Y ++ G +L W + T
Sbjct: 189 PAEWLQDAGLTPENYAARENRAALARVAERLIDAAEPYYISSQAGLHDLPPRCAWAIATA 248
Query: 336 LILYQKI 342
+Y++I
Sbjct: 249 RSVYREI 255
>sp|P54975|CRTB_PARSN Phytoene synthase OS=Paracoccus sp. (strain N81106 / MBIC 01143)
GN=crtB PE=3 SV=2
Length = 304
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 18/249 (7%)
Query: 129 VYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDI-------FNGH-PNDILDAALTDTV 180
+YAWC+ D+++DG A P A++ + RL + G P AAL
Sbjct: 37 LYAWCRHADDVIDG-QALGSRPEAVNDPQARLDGLRADTLAALQGDGPVTPPFAALRAVA 95
Query: 181 SKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSAS 240
+ + D+I+G MD E Y ++ Y Y+ G VG+M VMG+ D
Sbjct: 96 RRHDFPQAWPMDLIEGFAMDVEARDYRTLDDVLEYSYHVAGIVGVMMARVMGVRDDP--- 152
Query: 241 AQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWR 300
+ + A LG+ QLTNI RDV +DA GR YLP D L + G R + S E
Sbjct: 153 ---VLDRACDLGLAFQLTNIARDVIDDARIGRCYLPGDWLDQAGARVDGPVP---SPELY 206
Query: 301 EFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYV 360
+ + A +Y A G ++L W + L +Y+ I I+ + +R
Sbjct: 207 TVILRLLDAAELYYASARVGLADLPPRCAWSIAAALRIYRAIGLRIRKGGPEAYRQRIST 266
Query: 361 GNIKKLFLV 369
K+ L+
Sbjct: 267 SKAAKIGLL 275
>sp|O06728|YISP_BACSU Putative phytoene/squalene synthase YisP OS=Bacillus subtilis
(strain 168) GN=yisP PE=3 SV=2
Length = 267
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 16/260 (6%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
+ EAY++C +I EYA + L ++++A WAV ++C T D V PA
Sbjct: 4 IKEAYQQCGQIVGEYAPACFKALSYLPLKQRQASWAVLSFC-HTAASADEK----VLPAF 58
Query: 153 LDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQEL 212
+ + Q NG + L A F L +PFR+ I + D + Y + EL
Sbjct: 59 EAKADHVYQRTNNGKQH--LWKAFDHAYRTFTLESEPFREFIAAQKEDAKP--YDDLDEL 114
Query: 213 YLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGR 272
+Y Y GG GLM +P++ + + AA+ LG+ QL L D+G D + R
Sbjct: 115 LMYAYRTGGAAGLMLLPIL-----TRRKQDQLKQAAVSLGLAIQLVRFLSDLGTDQQKNR 169
Query: 273 IYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPV 332
I P+ + +FG + D+ V+ + + A + + ++ + S+ V
Sbjct: 170 I--PRQVMQQFGYTEADLQKGTVNKAFTMTWEYIAFEAEAYLEECQDALPLFPQYSQKTV 227
Query: 333 WTVLILYQKILDAIQDNDYD 352
L L++ +L+ I+ +D
Sbjct: 228 KAALHLHRAVLEKIRAKQHD 247
>sp|E4ZUB5|LCPS_LEPMJ Bifunctional lycopene cyclase/phytoene synthase OS=Leptosphaeria
maculans (strain JN3 / isolate v23.1.3 / race
Av1-4-5-6-7-8) GN=Lema_P114090.1 PE=3 SV=1
Length = 581
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 26/283 (9%)
Query: 108 AKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NG 166
++++YL + + + +Y++C+ D+LVD NA A +W +L N
Sbjct: 297 SRSFYLASSTFQGPLRMDLLLLYSFCRVADDLVD--NAATTEEA--RQWIAKLHKFLDNV 352
Query: 167 HPNDILDAALTDTVSK---------------FNLHIKPFRDMIKGMRMDTEKCRYANFQ- 210
+ D++ +++TD V K L +P RD+++G MD E + Q
Sbjct: 353 YRKDVVCSSVTDQVRKEFPLDTHSALLQLPCCKLSAEPLRDLLRGFEMDLEFNSTSPIQS 412
Query: 211 --ELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQS---IYNAALYLGIGNQLTNILRDVG 265
+L LY GTV M + ++ SS +A+ + A +G+ Q NI RD+G
Sbjct: 413 TEDLVLYSERVAGTVAQMCIQLIFHLYPSSLTAEKRHKVVAAGNSMGVALQYVNIARDIG 472
Query: 266 EDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELD 325
DA GR+YLP D L++ GL + + + A FY+ A+ ++L
Sbjct: 473 VDAKIGRVYLPTDWLSEVGLNCDTVLKDPKDPRIEALRGRLLDDAFSFYEEAKLAIAQLP 532
Query: 326 KASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFL 368
++ P+ + Y +I ++ + + RA V +++ +
Sbjct: 533 IEAQGPIRVAVESYMEIGRTLKQDGFIVKAGRATVPKWRRVLV 575
>sp|D4D802|LCPS_TRIVH Bifunctional lycopene cyclase/phytoene synthase OS=Trichophyton
verrucosum (strain HKI 0517) GN=TRV_03236 PE=3 SV=1
Length = 595
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 41/305 (13%)
Query: 84 SKPQLDAMFLDEAYERC-----------RKICAEYAKTYYLGTLLLTKERQKAIWAVYAW 132
S P+L +F + C + + ++T YLG+ + + + + A+Y++
Sbjct: 270 SIPRLLTLFFTRSRRYCDTNVLREMSQAVTLLKQKSQTMYLGSAMFEGQLRLDLVALYSF 329
Query: 133 CKRTDELVD-GPNA-----------------FCVSPAALDRWEERLQDIFNGHPNDILDA 174
C++ D+L+D PN F + AALD Q + P + A
Sbjct: 330 CRKADDLIDDAPNRATAQYWIKQCEKALELRFKLKGAALDN-TAAYQQLTKSIPPQLHAA 388
Query: 175 ALTDTVSKFNLHIKPFRDMIKG----MRMDTEKCRY--ANFQELYLYCYYAGGTVG-LMS 227
S+ L P D++KG M+ D+E+ + A +L +Y Y+ GT+ L+
Sbjct: 389 VHLLPASR--LPKGPLSDLLKGFEIDMKFDSERGIFPIATEHDLEVYAYHVAGTIATLLL 446
Query: 228 VPVMGMDPDSSASAQS--IYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGL 285
V P S + ++ + +A +G Q TNI RD+ DA GR+Y+P LA+ GL
Sbjct: 447 ELVFRHHPVSISDSERLRVISAGEGMGRALQYTNIARDIVRDAEIGRVYIPSVWLAEQGL 506
Query: 286 RDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDA 345
+ ++ + + + + +A Y+ +E SEL R PV + +Y I
Sbjct: 507 TPSMVVNQPRNPKLIPLRRRLLDKAEKCYRDTQEAISELPANVRAPVRATVTVYMDIGQV 566
Query: 346 IQDND 350
I++N+
Sbjct: 567 IRENE 571
>sp|B2WAQ3|LCPS_PYRTR Bifunctional lycopene cyclase/phytoene synthase OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_07366 PE=3
SV=1
Length = 583
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 128/294 (43%), Gaps = 22/294 (7%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
LDEA R ++ ++++YL + + + +Y++C+ D+LVD + + A
Sbjct: 286 LDEAVNRLKR----KSRSFYLASATFPGPLRADLLLLYSFCRVADDLVDNASDADEARAW 341
Query: 153 LDRWEERLQDIFNGH-PNDILDAALTD-----------TVSKFNLHIKPFRDMIKGMRMD 200
+ + + L ++++ P ++ + + D + L +P D++ G MD
Sbjct: 342 IAKMRKFLNNVYSDKLPQSVVHSQICDDFPPSTQSALLQLPATKLSPQPLEDLLHGFEMD 401
Query: 201 T---EKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQS---IYNAALYLGIG 254
+ ++L +Y GTV M + ++ S+ + I A +G+
Sbjct: 402 LAFQQGPIIRTMEDLRVYSERVAGTVAQMCIQLIFYWYPSTLDTEEKNVIVAAGNSMGVA 461
Query: 255 NQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFY 314
Q NI RD+ DA GR+YLP + L++ GL +D+ + + + K + A Y
Sbjct: 462 LQYVNIARDIEVDAQIGRVYLPLNWLSEAGLSYDDVLKKPNQAQIQTLRKHLLNHAFSVY 521
Query: 315 KLAEEGASELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFL 368
+ A++ L +R P+ + Y +I ++ Y RA V +++ +
Sbjct: 522 EKAKDSIERLPIEARGPIRVAVESYMEIGRILRSEQYQVKAGRATVPKSRRIMV 575
>sp|E4UPP6|LCPS_ARTGP Bifunctional lycopene cyclase/phytoene synthase OS=Arthroderma
gypseum (strain ATCC MYA-4604 / CBS 118893)
GN=MGYG_02096 PE=3 SV=1
Length = 594
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 108 AKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD-GPNA-----------------FCVS 149
+++ YLG+ + + + + A+Y++C++ D+L+D P+ F +
Sbjct: 304 SQSMYLGSAMFEGQLRLDLIALYSFCRKADDLIDDAPDRETAKYWIEQCEKALELRFKLK 363
Query: 150 PAALDRWEERLQDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKG----MRMDTEKCR 205
ALD E Q + P + AA S+ L +P +++G ++ D EK
Sbjct: 364 ETALDD-TEAYQLLTKSIPQPLHAAAHLLPASR--LPKEPLSCLLQGFEIDLKFDFEKGS 420
Query: 206 Y--ANFQELYLYCYYAGGTVG-LMSVPVMGMDPDSSASAQS--IYNAALYLGIGNQLTNI 260
+ A +L +Y Y+ GTV L+ V P S + A+ + +A +G Q TNI
Sbjct: 421 FPIATEHDLEVYAYHVAGTVASLLLELVFRHHPVSISEAERLRVISAGEVMGRALQYTNI 480
Query: 261 LRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEG 320
RD+ DA GR+Y+P LA+ GL + S + + + + +A Y +E
Sbjct: 481 ARDITRDAEIGRVYIPSSWLAEEGLTPSMVISHPRNSKLIPLRRRILEKADKCYCETQEA 540
Query: 321 ASELDKASRWPVWTVLILYQKILDAIQDND 350
S+L + PV + Y +I I++N+
Sbjct: 541 ISKLPSNVQGPVRATVTAYMEIGQVIRENE 570
>sp|D1Z4K7|LCPS_SORMK Bifunctional lycopene cyclase/phytoene synthase OS=Sordaria
macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) /
K-hell) GN=putative al2 PE=3 SV=1
Length = 602
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 47/279 (16%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
L EA ER R ++++YL L + + + +Y++C+ D+LVD S
Sbjct: 284 LREAVERLRL----KSRSFYLANSLFSGRLRIDLILLYSFCRLADDLVDDAK----SRLE 335
Query: 153 LDRWEERLQDIFNGHPNDI------------LDAALTDTVSKFN---LHI--------KP 189
+ W +L + H D +DA + + F LH+ KP
Sbjct: 336 VLSWTAKLNHFLDQHYGDSDATEDPKQKAERIDAYIKEAFPPFAYQALHLLPTHILPPKP 395
Query: 190 FRDMIKGMRMDTE------------KCRYANFQELYLYCYYAGGTVGLMSVPVMGMD--P 235
++IKG MD++ K A+ ++L Y GTVG + + ++ P
Sbjct: 396 LYELIKGFEMDSQFTFHGSSDSTNLKFPIAHDKDLKTYAIRVAGTVGELCIALIIHHCLP 455
Query: 236 DSSASAQS-IYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRK 294
D S S + + +AA +GI Q NI RD+ DA GR+YLP L + GL + +
Sbjct: 456 DMSDSQKRRLESAACRMGIALQYVNIARDILVDAQIGRVYLPTSWLKEEGLTHKAVLDNP 515
Query: 295 VSDEWREFMKEQIT-RARYFYKLAEEGASELDKASRWPV 332
E E M+ ++ A Y+ A ++ +R P+
Sbjct: 516 EGPEVIEKMRRRLLDNAFELYREARPEMQQIPSEARGPM 554
>sp|P37295|LCPS_NEUCR Bifunctional lycopene cyclase/phytoene synthase OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=al-2 PE=1 SV=1
Length = 602
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 46/253 (18%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAA 152
L EA ER R ++++YL L + + + +Y++C+ D+LVD S
Sbjct: 284 LREAVERLRL----KSRSFYLANSLFSGRLRIDLILLYSFCRLADDLVDDAK----SRRE 335
Query: 153 LDRWEERLQDIFNGHPNDI------------LDAALT--------DTVSKFNLHI---KP 189
+ W +L + H D +DA + + HI KP
Sbjct: 336 VLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLLPTHILPPKP 395
Query: 190 FRDMIKGMRMDTEKCRY------------ANFQELYLYCYYAGGTVGLMSVPVMGMD--P 235
D+IKG MD++ + A+ ++L Y Y GTVG + + ++ P
Sbjct: 396 LYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCIALIIYHCLP 455
Query: 236 D-SSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRK 294
D S + + AA +GI Q NI RD+ DA GR+YLP L K GL + +
Sbjct: 456 DMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGLTHKMVLENP 515
Query: 295 VSDEWREFMKEQI 307
E E M+ ++
Sbjct: 516 EGPEVIERMRRRL 528
>sp|Q9ACU1|CRIT_STRCO Bifunctional protein CrtB/UppS OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=crtB/uppS3 PE=3 SV=1
Length = 564
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 93 LDEAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD-GPNAFCVSPA 151
L AYE C ++A + L E + +++A+ +W TD ++D GP
Sbjct: 38 LRAAYEVCEAEARQFAVELWAAAETLPVETRPSLYAIASWSAYTDRIIDEGP-------- 89
Query: 152 ALDRWEERLQ--------DIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEK 203
L+ EERL D+ GH + L AL DTV ++ L + + R D
Sbjct: 90 -LEGREERLAQWSADTLADLRAGHSSHPLRRALVDTVRRWGLAEALIEEHLDSARADCAA 148
Query: 204 CR-YANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILR 262
+ F++ Y G + + VP++ + LG Q+ ++
Sbjct: 149 VPVFETFKDQRRYLRGCSGALAELWVPLL------EPRGPEAFRLMSVLGEACQVADLFE 202
Query: 263 DVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRAR 311
D+ +D + GR YLP+ +L GL +D+ + + F+ Q+ R
Sbjct: 203 DLPDDLAAGRCYLPRQDLRGLGLDVDDLRRGEREEALNAFVDAQLAHWR 251
>sp|Q0V6M5|LCPS_PHANO Bifunctional lycopene cyclase/phytoene synthase OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=SNOG_00339 PE=3 SV=1
Length = 585
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 30/285 (10%)
Query: 108 AKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERL------- 160
++++YL + + + +Y++C+ D+LVD NA A W +L
Sbjct: 297 SRSFYLASATFPGPLRSDLLLLYSFCRVADDLVD--NAATAEEA--KEWISKLHQYLDLV 352
Query: 161 ----------QDIFNGH-PNDILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANF 209
+D H P+D A L K L +P +D++ G MD +
Sbjct: 353 YSDAKSSTVSEDFVQAHFPSDARSALLQLPAHK--LPRQPLQDLLHGFEMDLAFNTSSPI 410
Query: 210 Q---ELYLYCYYAGGTVGLMSVP-VMGMDPDSSASAQ--SIYNAALYLGIGNQLTNILRD 263
+ +L LY GTV M + + + P + S + + +A +G+ Q NI RD
Sbjct: 411 KTETDLRLYSERVAGTVAQMCIELIFRLYPSNMTSGEERKVVDAGNQMGMALQYVNIARD 470
Query: 264 VGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASE 323
+ DA GR+YLP D L + GL +++ + +A Y A
Sbjct: 471 ISVDAHIGRVYLPLDWLQESGLTYDEVLISPEGARMESLRMRLLEKAFSIYDGARGAIET 530
Query: 324 LDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFL 368
L +R P+ + Y +I ++ Y RA V +++ +
Sbjct: 531 LPVEARGPIRVAVESYMEIGRTLRQKGYTVRAGRATVSKWRRVIV 575
>sp|B2ATB0|LCPS_PODAN Bifunctional lycopene cyclase/phytoene synthase OS=Podospora
anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC
10383) PE=3 SV=1
Length = 593
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 108 AKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGH 167
++++YL L T + + +Y++C+ D+LVD S + W +L + H
Sbjct: 296 SRSFYLANSLFTGRLRIDLILLYSFCRLADDLVDD----STSRTEVKSWTTKLYKFLDLH 351
Query: 168 -----------PNDILDAALTDT-------VSKFNLHIKPFRDMIKGMRMDT-------- 201
ND +D A + L +P +I+G +D+
Sbjct: 352 YKSDVKANKARINDYIDEAFPPEAKSALKYLPATILPSQPLYQLIEGFELDSQFSFHDSS 411
Query: 202 EKCRYANFQE--LYLYCYYAGGTVGLMSVPVM--GMDPD-SSASAQSIYNAALYLGIGNQ 256
E +Y E L Y GTVG + V ++ +P+ + + + + +G+ Q
Sbjct: 412 ESAKYPIVDEDKLNYYGQCVAGTVGELCVALIIEHCEPEMPDERKKMLMSVSRTMGVALQ 471
Query: 257 LTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKL 316
NI RD+ DA GR+YLP L + GL ED+ + + ++ A Y
Sbjct: 472 YVNIARDIVVDAEMGRVYLPTTWLKEEGLTPEDVVAHPRGKHVENLRRRLLSEAFKLYDE 531
Query: 317 AEEGASELDKASRWPVWTVLILYQKI 342
A + + K +R P+ + Y +I
Sbjct: 532 ARPKMNGIPKEARGPMIGAVETYMEI 557
>sp|P55351|Y4AD_RHISN Uncharacterized protein y4aD OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00430 PE=3 SV=1
Length = 292
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 192 DMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYL 251
D++ RMD K RY N+ E+ YC Y+ VG + V G +S+A+ + A+ L
Sbjct: 97 DLLTAFRMDVTKQRYENWDEVIDYCRYSAMPVGRFVLDVHG---ESAAT----WPASDVL 149
Query: 252 GIGNQLTNILRDVGED-ASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRA 310
G Q+ N L+D G+D + R+Y+P+D L+ G E++ + K S + + ++ +A
Sbjct: 150 CAGLQVCNHLQDCGKDFLNLNRVYIPRDALSASGASIEELGAAKSSLQMLQCLRSLAAKA 209
Query: 311 RYFYKLAEEGASEL-DKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLF-- 367
S++ D R+ V +L KI+ ++ D L +R ++ ++ L
Sbjct: 210 EVLLNGGGALVSQVKDFRLRFEVSVILSFADKIVSMLKMR--DPLRERVHLSPLELLLHG 267
Query: 368 -------LVRQAYYRAQSISTATD 384
R+A+ R T D
Sbjct: 268 VGAMANEAARRAFGRGTRFKTTVD 291
>sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus
musculus GN=Ndufaf6 PE=1 SV=1
Length = 333
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 8/242 (3%)
Query: 112 YLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPND 170
YL +LL E Q++ A+ A+ ++ D + + + W++ ++D++ + P+
Sbjct: 73 YLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDMYCDNPPHQ 132
Query: 171 ILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPV 230
+ L V K NL + +I + + Y + QEL Y G++ +++ V
Sbjct: 133 PVAIELWKAVKKHNLTKRWLMRIIDEREKNLDDKAYRSMQELENYAENTQGSLLYLTLEV 192
Query: 231 MGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDI 290
+G+ D A +AA ++G + LR +SR +++LP D + G+ ED
Sbjct: 193 LGVK-DLHAD-----HAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDF 246
Query: 291 FSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDND 350
R R+ + + ++A K A + A +P + + + L IQ D
Sbjct: 247 LRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSV-PAEAFPAFLQTVSLEDYLKKIQRVD 305
Query: 351 YD 352
+D
Sbjct: 306 FD 307
>sp|D3ZN43|NDUF6_RAT NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1
Length = 333
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 112 YLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPND 170
YL +LL E Q++ A+ A+ ++ D + + + W + ++D+F + P+
Sbjct: 73 YLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRKAVEDMFCDNPPHQ 132
Query: 171 ILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPV 230
+ L V + NL + +I + + Y + +EL Y ++ +++ V
Sbjct: 133 PVAMELWKAVKRHNLTKRWLLRIIDEREKNLDDKAYRSIRELETYAENTQSSLLYLTLEV 192
Query: 231 MGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDI 290
+G+ D A +AA ++G + LR +SR +++LP D + G+ ED
Sbjct: 193 LGVK-DVHAD-----HAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDF 246
Query: 291 FSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDND 350
R R+ + + ++A K A S + A +P + + + L IQ D
Sbjct: 247 LRRNQDKNVRDVVYDIASQAHLHLKHARSFHSRV-PAEAFPAFLQTVSLEDYLKKIQRVD 305
Query: 351 YD 352
+D
Sbjct: 306 FD 307
>sp|A7YVD7|NDUF6_BOVIN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos
taurus GN=NDUFAF6 PE=2 SV=1
Length = 333
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 112 YLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGHP-ND 170
YL +LLL E + + +A+ A+ ++ D + + + W++ + DI++ +P +
Sbjct: 73 YLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKKTVDDIYSDNPPHQ 132
Query: 171 ILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPV 230
+ L V + NL + +I + + Y N QEL Y ++ +++ +
Sbjct: 133 PVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEI 192
Query: 231 MGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDI 290
+G+ D A +AA ++G + LR SR R++LP D G+ ED
Sbjct: 193 LGIK-DLHAD-----HAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQEDF 246
Query: 291 FSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDND 350
+ R+ + + ++A K A + + +P + + + L IQ D
Sbjct: 247 LRKSQDRNVRDVVYDVASQAHLHLKHARSFHRSIPVKA-FPAFLQTVALEDYLKKIQQVD 305
Query: 351 YD 352
+D
Sbjct: 306 FD 307
>sp|E3Q717|LCPS_COLGM Bifunctional lycopene cyclase/phytoene synthase OS=Colletotrichum
graminicola (strain M1.001 / M2 / FGSC 10212)
GN=GLRG_02475 PE=3 SV=1
Length = 587
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 31/271 (11%)
Query: 105 AEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVD---GPNAFCVSPAALDRWEERL- 160
A+ +++++L + + + + +Y++C+ D+LVD P V + LDR L
Sbjct: 292 AKKSRSFHLASSVFPGRLRIDLTLLYSYCRLADDLVDDAATPEEAAVWISKLDRHLSLLY 351
Query: 161 ------------QDIFNGHPNDILDAALTDTVSKFNLHIKPFRDMIKGMRMD----TEKC 204
+ P L A D + L +P +++KG MD
Sbjct: 352 KDPDATSTPLASKYAAENFPPSALSA--LDMLPTSLLPREPLAELLKGFEMDLSFSNSAF 409
Query: 205 RYANFQELYLYCYYAGGTVGLMSVPVM------GMDPDSSASAQSIYNAALYLGIGNQLT 258
A+ ++L LY TVG + ++ G+ PD + + N A +G+ Q
Sbjct: 410 PIADPEDLELYAARVASTVGQACLELVFCHCQHGL-PDYMKA--YLRNTARQMGLALQFV 466
Query: 259 NILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAE 318
NI RD+ DA GR+YLP L + GL ED+ S+ + + + +A Y A
Sbjct: 467 NISRDIAVDAKIGRVYLPTTWLKEEGLTPEDVLKSPNSEGVGKVRRRILAKALDHYGEAR 526
Query: 319 EGASELDKASRWPVWTVLILYQKILDAIQDN 349
+ + +R P+ + Y +I + N
Sbjct: 527 DSMKWIPSEARGPMIVAVESYMEIGRVLMRN 557
>sp|Q330K2|NDUF6_HUMAN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2
Length = 333
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 112 YLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF-NGHPND 170
YL +LLL E + +++A+ A+ ++ D + + + W++ ++DI+ + P+
Sbjct: 73 YLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDIYCDNPPHQ 132
Query: 171 ILDAALTDTVSKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPV 230
+ L V + NL + ++ + + Y N +EL Y ++ +++ +
Sbjct: 133 PVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEI 192
Query: 231 MGMDPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDI 290
+G+ D A +AA ++G + LR SR +++LP D G+ ED
Sbjct: 193 LGIK-DLHAD-----HAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDF 246
Query: 291 FSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASRWPVWTVLILYQKILDAIQDND 350
R R+ + + ++A K A + +P + + + L IQ D
Sbjct: 247 LRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTV-PVKAFPAFLQTVSLEDFLKKIQRVD 305
Query: 351 YD 352
+D
Sbjct: 306 FD 307
>sp|Q9UUQ6|LCPS_MUCCL Bifunctional lycopene cyclase/phytoene synthase OS=Mucor
circinelloides f. lusitanicus GN=CARRP PE=2 SV=1
Length = 614
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 24/300 (8%)
Query: 108 AKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVS-PAALDRWEERLQDIFNG 166
+K++Y + + + ++ + +YA+C+ TD+L D + L + + D+F
Sbjct: 300 SKSFYTASAVFPGDVRQELGVLYAFCRATDDLCDNEQVPVQTRKEQLILTHQFVSDLFGQ 359
Query: 167 HP-----------NDILDAALTDTVSKFN-----LHIKPFRDMIKGMRMDTEKCRYANFQ 210
ND L A+ F L ++++ G + D E+ + +
Sbjct: 360 KTSAPTAIDWDFYNDQLPASCISAFKSFTRLRHVLEAGAIKELLDGYKWDLERRSIRDQE 419
Query: 211 ELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQS---IYNAALYLGIGNQLTNILRDVGED 267
+L Y +VG M ++ D AS Q I A +G+ Q TNI RD+ D
Sbjct: 420 DLRYYSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVLQYTNIARDIVTD 479
Query: 268 ASR-GRIYLPQDELA-KFGLRDEDIFSRKVSDE-WREFMKEQITRARYFYKLAEEGASEL 324
+ GR YLPQD L K + +R++ +E I +A +A +G +L
Sbjct: 480 SEELGRCYLPQDWLTEKEVALIQGGLAREIGEERLLSLSHRLIYQADELMVVANKGIDKL 539
Query: 325 DKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVRQAYYRAQSISTATD 384
+ V +Y I ++ + + RA+VGN K++ + + Y + AT
Sbjct: 540 PSHCQGGVRAACNVYASIGTKLKSYKH-HYPSRAHVGNSKRVEIALLSVYNLYTAPIATS 598
>sp|Q7Z859|LCPS_PHARH Bifunctional lycopene cyclase/phytoene synthase OS=Phaffia
rhodozyma GN=crtYB PE=2 SV=1
Length = 673
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 106/290 (36%), Gaps = 77/290 (26%)
Query: 84 SKPQLDAMFLDEAY--------ERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKR 135
+ P L F Y E K+ E ++++++ + E ++ + +YA+C+
Sbjct: 277 TPPVLSLFFSSRPYSSQPKRDLELAVKLLEEKSRSFFVASAGFPSEVRERLVGLYAFCRV 336
Query: 136 TDELVDGPNAFCVSPAALDRWEERLQDIFN-----GHPNDILDAA--------------- 175
TD+L+D P A +D + L +F P+ IL +
Sbjct: 337 TDDLIDSPEVSSNPHATIDMVSDFLTLLFGPPLHPSQPDKILSSPLLPPSHPSRPTGMYP 396
Query: 176 ---------------LTDTVS-----KFNLHIK--------PFRDMIKGMRMD------- 200
LT+ V F L K P ++++G D
Sbjct: 397 LPPPPSLSPAELVQFLTERVPVQYHFAFRLLAKLQGLIPRYPLDELLRGYTTDLIFPLST 456
Query: 201 ----TEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASA-----QSIYNAALYL 251
K +L Y G+V + V V S A +++ A+ +
Sbjct: 457 EAVQARKTPIETTADLLDYGLCVAGSVAELLVYVSWASAPSQVPATIEEREAVLVASREM 516
Query: 252 GIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWRE 301
G QL NI RD+ DA+ GR YLP L+ FGLRDE + + +W E
Sbjct: 517 GTALQLVNIARDIKGDATEGRFYLP---LSFFGLRDESKLA--IPTDWTE 561
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,863,956
Number of Sequences: 539616
Number of extensions: 5642574
Number of successful extensions: 12860
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 12719
Number of HSP's gapped (non-prelim): 81
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)