Query         016696
Match_columns 384
No_of_seqs    189 out of 1330
Neff          6.9 
Searched_HMMs 13730
Date          Mon Mar 25 17:55:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016696.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016696hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1ezfa_ a.128.1.2 (A:) Squalen 100.0 6.5E-54 4.7E-58  420.2  18.7  276   95-370     1-289 (333)
  2 d1ps1a_ a.128.1.4 (A:) Pentale  96.8   0.064 4.6E-06   48.4  19.7  198  112-320    50-270 (311)
  3 d2q80a1 a.128.1.1 (A:6-296) Ge  94.8    0.19 1.4E-05   45.3  13.3  136  189-327   113-276 (291)
  4 d1fpsa_ a.128.1.1 (A:) Farnesy  94.7     1.3 9.6E-05   40.4  19.5   93  190-284   159-273 (348)
  5 d1di1a_ a.128.1.4 (A:) Aristol  94.0     1.8 0.00013   38.0  18.6  203  112-329    48-275 (300)
  6 d1rqja_ a.128.1.1 (A:) Farnesy  93.6     1.2 8.5E-05   39.9  16.2   74  192-265   153-229 (299)
  7 d1n1ba2 a.128.1.3 (A:271-598)   93.5     2.6 0.00019   38.2  19.0  201  114-329    55-288 (328)
  8 d5easa2 a.128.1.3 (A:221-548)   92.0     1.3 9.5E-05   40.3  14.1  194  123-329    67-286 (328)
  9 d1kiya_ a.128.1.5 (A:) Trichod  91.9     2.7 0.00019   38.7  16.1  163  115-290    78-258 (354)
 10 d1v4ea_ a.128.1.1 (A:) Octopre  90.9    0.75 5.5E-05   40.9  11.0   88  189-279   127-226 (280)
 11 d1rtra_ a.128.1.1 (A:) Farnesy  89.8     1.7 0.00013   38.5  12.4  123  192-326   148-273 (290)
 12 d2p0ta1 a.290.1.1 (A:22-169) U  49.6      14   0.001   29.3   5.9   62  151-220    82-145 (148)

No 1  
>d1ezfa_ a.128.1.2 (A:) Squalene synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-54  Score=420.15  Aligned_cols=276  Identities=17%  Similarity=0.110  Sum_probs=227.8

Q ss_pred             HHHHHHHHHHHhcCcchhHHHhcCChhhhHHHHHHHHHHHHHhhhcCCCCCCC-ChHHHHHHHHHHHHHHHcCC-----C
Q 016696           95 EAYERCRKICAEYAKTYYLGTLLLTKERQKAIWAVYAWCKRTDELVDGPNAFC-VSPAALDRWEERLQDIFNGH-----P  168 (384)
Q Consensus        95 ~a~~~C~~i~r~~s~sfyla~~~lP~~~R~al~ALYAf~R~~DdivD~~~~~~-~~~~rL~~Wr~~L~~~~~g~-----p  168 (384)
                      +++++|.++++++|+|||+++++||++.|++++++|+|||.+|||+|++..+. .....|++|++.+.+...+.     +
T Consensus         1 ~sl~~C~~~l~~~SrSF~~a~~~Lp~~~R~~v~~lYafcR~~DdI~D~~~~~~~~k~~~L~~~~~~l~~~~~~~~~~~~~   80 (333)
T d1ezfa_           1 NSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEK   80 (333)
T ss_dssp             CHHHHHHHHHHHHCSSHHHHHHTSCTHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTTCTTCCCCCCCST
T ss_pred             ChHHHHHHHHHhhCccHHHHHHHCCHHHHHHHHHHHHHHHHhhhhHhCCCCCHHHHHHHHHHHHHHHHHhhhcccccCcc
Confidence            37899999999999999999999999999999999999999999999976542 34567889998887654332     2


Q ss_pred             CCHHHHHHHHHH-------HhcCCChHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHhchHHHHHHHhhhCCCCCCchhH
Q 016696          169 NDILDAALTDTV-------SKFNLHIKPFRDMIKGMRMDTEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASA  241 (384)
Q Consensus       169 ~~Pv~~aL~~~v-------~~~~L~~~~~~~lI~g~~~DL~~~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~~~~~~~~~  241 (384)
                      .+++...+..++       ..+..+...+.+.+.++.+|+.+.+|+|++||+.|||+|||+||+|+++++|..+......
T Consensus        81 ~~~ll~~~~~v~~~~~~l~~~~~~~i~~~~~~m~~gm~d~~~~~~~t~~dL~~Ycy~VAG~VG~~l~~l~~~~~~~~~~~  160 (333)
T d1ezfa_          81 DRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLV  160 (333)
T ss_dssp             THHHHHTHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTHHHHHHHHHHHHHHTSSCHHH
T ss_pred             hHHHHhhccHHHHHHHHHHHHhccchHHHHHHHhccHHHHccCcCCCHHHHHHHHHHHHHHHHHHHHHHhCcCCCccccH
Confidence            345555444444       4444555556666666666666678999999999999999999999999999765444444


Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhHHHHHhcCCCCCCHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016696          242 QSIYNAALYLGIGNQLTNILRDVGEDASRGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGA  321 (384)
Q Consensus       242 ~~~~~~A~~LG~AlQLtNILRDv~eD~~~GR~YLP~d~L~~~Gvs~edl~~~~~~~~~~~li~~~~~~A~~~l~~A~~~~  321 (384)
                      ++..+.|.+||+|+|+||||||++||+++||||||.|+|.+||++++++.+++.++++..++.+++++|+.||++|..++
T Consensus       161 ~~~~~~A~~lG~AlQltNIlRDi~eD~~~gR~YlP~e~l~~~g~~~~dl~~~~~~~~~~~~~~~l~~~A~~~~~~a~~y~  240 (333)
T d1ezfa_         161 GEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYL  240 (333)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHTHHHHHHHTCCCSCHHHHTTTCSSGGGGGSGGGHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHhCCcEECCHHHHHHcCCCHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccCcHHHHHHHHHHHHHHHHHHhCCCCCCCCCcccChHHHHHHHH
Q 016696          322 SELDKASRWPVWTVLILYQKILDAIQDNDYDNLTKRAYVGNIKKLFLVR  370 (384)
Q Consensus       322 ~~Lp~~~r~~v~~~~~ly~~iL~~Ie~~~y~vf~~r~~v~~~~kl~~l~  370 (384)
                      ..||..+++.+.+...+|..+.-++.++|+++|++++++++.++..++.
T Consensus       241 ~~lp~~~~~~~~~~~~~~a~~tl~~~~~~~~~~~~~vkisr~~~~~l~~  289 (333)
T d1ezfa_         241 SRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMM  289 (333)
T ss_dssp             HTCCCHHHHHHHHHHHHHHHHHHHHHTTCGGGGTSCCCC----------
T ss_pred             HHCCchhHHHHHHHHHHHHHHHHHHHHcCchhcCCCeEeeHHHHHHHHH
Confidence            9999998887777778888888888889999999999999999887653


No 2  
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]}
Probab=96.77  E-value=0.064  Score=48.39  Aligned_cols=198  Identities=13%  Similarity=0.139  Sum_probs=117.0

Q ss_pred             hHHHhcCChhhhHHH---HHHHHHHHHHhhhcCCCCCCCChHHHHHHHHHHHHHHHcCC---CCCHHHHHHHHHHHhcC-
Q 016696          112 YLGTLLLTKERQKAI---WAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGH---PNDILDAALTDTVSKFN-  184 (384)
Q Consensus       112 yla~~~lP~~~R~al---~ALYAf~R~~DdivD~~~~~~~~~~rL~~Wr~~L~~~~~g~---p~~Pv~~aL~~~v~~~~-  184 (384)
                      .+++.+.|....+.+   .-+.+|.-..||+.|+....  ....+....+.+.....|.   +.+|+..+|.++..+.. 
T Consensus        50 ~~~a~~~P~~~~~rl~l~~~~~~~~f~~DD~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~  127 (311)
T d1ps1a_          50 DLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGE--NPEDTKQLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCE  127 (311)
T ss_dssp             HHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGG--CHHHHHHHHHHHHGGGTSCCCTTSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHhcccccCcccc--CHHHHHHHHHHHHHhhccCCCcccCHHHHHHHHHHHHHHH
Confidence            556777887555544   33566777889999964321  2456666777777766664   23689999988877643 


Q ss_pred             -CChHHH-------HHHHHHHHhhcc----CCCCCCHHHHHHHHHHhchHHHHHHH--hhhCCC-CCCchhHHhHHHHHH
Q 016696          185 -LHIKPF-------RDMIKGMRMDTE----KCRYANFQELYLYCYYAGGTVGLMSV--PVMGMD-PDSSASAQSIYNAAL  249 (384)
Q Consensus       185 -L~~~~~-------~~lI~g~~~DL~----~~~~~t~~dL~~Yc~~vAGtVG~l~l--~ilg~~-~~~~~~~~~~~~~A~  249 (384)
                       .+..+.       .+++++......    ...++|++|...+-..+.|.-..+.+  -.+|.. ++.....+.+.....
T Consensus       128 ~~~~~~~~r~~~~~~~~~~~~~~e~~~r~~~~~~ps~~eYl~~R~~~~g~~~~~~l~~~~~g~~lp~~v~~~~~~~~l~~  207 (311)
T d1ps1a_         128 GMTPAWCARSARHWRNYFDGYVDEAESRFWNAPCDSAAQYLAMRRHTIGVQPTVDLAERAGRFEVPHRVFDSAVMSAMLQ  207 (311)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHTSHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhcccHHHHHHHHHHHcCCCCCHHHHhhcchHHHHH
Confidence             344433       444455444332    23467899988888888876443333  234442 211111123445666


Q ss_pred             HHHHHHHHHHHHHhHHHHHhcCCC-CCCHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 016696          250 YLGIGNQLTNILRDVGEDASRGRI-YLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEG  320 (384)
Q Consensus       250 ~LG~AlQLtNILRDv~eD~~~GR~-YLP~d~L~~~Gvs~edl~~~~~~~~~~~li~~~~~~A~~~l~~A~~~  320 (384)
                      ..+....++|=|-....+...|-. =+-.-++.++|++.++         ..+.+..+++...+.|..++..
T Consensus       208 ~~~~~~~l~NDi~S~~kE~~~g~~~N~V~vlm~~~g~s~~~---------A~~~v~~~~~~~~~~~~~~~~~  270 (311)
T d1ps1a_         208 IAVDVNLLLNDIASLEKEEARGEQNNMVMILRREHGWSKSR---------SVSHMQNEVRARLEQYLLLESC  270 (311)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHTTCCCSHHHHHHHHHCCCHHH---------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHhhhccCCcCcHHHHHHHccCCCHHH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence            777778888888777888777764 3333466778988765         3344555555555555555443


No 3  
>d2q80a1 a.128.1.1 (A:6-296) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.79  E-value=0.19  Score=45.30  Aligned_cols=136  Identities=12%  Similarity=0.065  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHhhcc---CCCCCCHHHHHHHHHHhchHHHHHHHhhhCCCCCCchhHHhHHHHHHHHHHHHHHHHHHHhH-
Q 016696          189 PFRDMIKGMRMDTE---KCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAALYLGIGNQLTNILRDV-  264 (384)
Q Consensus       189 ~~~~lI~g~~~DL~---~~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~~~~~~~~~~~~~~~A~~LG~AlQLtNILRDv-  264 (384)
                      .+.++..|...|+.   .....|++++..-++.-.|++..+++.+...-.+..   +++.+.+.++|.|+|+.|=+.|+ 
T Consensus       113 ~~~~~~~gq~~d~~~~~~~~~~s~~~y~~ii~~KT~~Lf~~~~~~ga~~~~~~---~~l~~~g~~lG~afQi~DD~ld~~  189 (291)
T d2q80a1         113 QLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYK---EDLKPLLNTLGLFFQIRDDYANLH  189 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC---SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHhccccccccccccccCCHHHHHHHHHhccchhhHhhhhhhhhhcccc---hhhHHHHHHHHHHHHHHHHhhhhc
Confidence            34677888888874   334568999988888888888777666543322221   23577899999999999888777 


Q ss_pred             ----------HHHHhcCCCCCCHHHHHhcCCCh---hhhhcc-cCCH-HHHHH---------HHHHHHHHHHHHHHHHHh
Q 016696          265 ----------GEDASRGRIYLPQDELAKFGLRD---EDIFSR-KVSD-EWREF---------MKEQITRARYFYKLAEEG  320 (384)
Q Consensus       265 ----------~eD~~~GR~YLP~d~L~~~Gvs~---edl~~~-~~~~-~~~~l---------i~~~~~~A~~~l~~A~~~  320 (384)
                                +.|+..|++-+|.=..-+.+=..   .+++.. ..++ .+..+         +.+.-..++.+.++|.+.
T Consensus       190 ~~~~~~GK~~g~Dl~~gK~Tlpvi~al~~~~~~~~l~~il~~~~~~~~~~~~i~~~l~~~ga~~~a~~~~~~~~~~A~~~  269 (291)
T d2q80a1         190 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQ  269 (291)
T ss_dssp             CC------CTTHHHHHTCCCHHHHHHHHHSTTCCHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhccccccchhccCCCcHHHHHHHHhcccHHHHHHHHhcccCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence                      37999999999886654433111   122222 2222 22222         223334667788888888


Q ss_pred             hhhcccc
Q 016696          321 ASELDKA  327 (384)
Q Consensus       321 ~~~Lp~~  327 (384)
                      +..||..
T Consensus       270 L~~l~~~  276 (291)
T d2q80a1         270 IDARGGN  276 (291)
T ss_dssp             HHHTTCC
T ss_pred             HHcCCCC
Confidence            8888753


No 4  
>d1fpsa_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.73  E-value=1.3  Score=40.40  Aligned_cols=93  Identities=13%  Similarity=0.038  Sum_probs=62.9

Q ss_pred             HHHHHHHHHhhccCC-------CCCCHHHHHHHHHHhchHHHHH--HH---hhhCCCCCCchhHHhHHHHHHHHHHHHHH
Q 016696          190 FRDMIKGMRMDTEKC-------RYANFQELYLYCYYAGGTVGLM--SV---PVMGMDPDSSASAQSIYNAALYLGIGNQL  257 (384)
Q Consensus       190 ~~~lI~g~~~DL~~~-------~~~t~~dL~~Yc~~vAGtVG~l--~l---~ilg~~~~~~~~~~~~~~~A~~LG~AlQL  257 (384)
                      ...+..|...|+...       ...|++++..-++.-.|+...+  +.   .+.|..  +....+.+...+.++|.|+|+
T Consensus       159 ~~~~~~GQ~ldl~~~~~~~~~~~~~t~~~Y~~~i~~KTa~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~g~~lGiaFQI  236 (348)
T d1fpsa_         159 AYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGID--SKEEHENAKAILLEMGEYFQI  236 (348)
T ss_dssp             HHHHHHHHHHHHHHSCTTTCCSSSCCHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhhhccccccccccCHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc--cccchhhccccccccchHHHH
Confidence            457788888887421       1347888888777777755211  21   122322  223446678899999999999


Q ss_pred             HHHHHhH----------HHHHhcCCCCCCHHHHHhcC
Q 016696          258 TNILRDV----------GEDASRGRIYLPQDELAKFG  284 (384)
Q Consensus       258 tNILRDv----------~eD~~~GR~YLP~d~L~~~G  284 (384)
                      .|=+-|+          +.|+..|+.-+|.-..-+.+
T Consensus       237 ~DDilD~~gd~~~~GK~g~Dl~egK~Tlpii~al~~~  273 (348)
T d1fpsa_         237 QDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRV  273 (348)
T ss_dssp             HHHHHHHSCCSSCCSSCSCCCSSCCCCHHHHHHHHTC
T ss_pred             HHHHhhhhcchhccCcccccccCCccHHHHHHHHHhC
Confidence            9988886          35888899999987765543


No 5  
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]}
Probab=93.99  E-value=1.8  Score=38.04  Aligned_cols=203  Identities=9%  Similarity=-0.016  Sum_probs=103.3

Q ss_pred             hHHHhcCCh---hhhHHHHHHHHHHHHHhhhcCCCCCCCChHHHHHHHHHHHHHHHcCC----CCCHHHHHHHHHHHhcC
Q 016696          112 YLGTLLLTK---ERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGH----PNDILDAALTDTVSKFN  184 (384)
Q Consensus       112 yla~~~lP~---~~R~al~ALYAf~R~~DdivD~~~~~~~~~~rL~~Wr~~L~~~~~g~----p~~Pv~~aL~~~v~~~~  184 (384)
                      .+++.+.|.   ++-.-+.-+++|.-..||..|+.+.     .....+.+.+.....|.    +..|+..+|.++.++..
T Consensus        48 ~~~a~~~P~a~~e~L~l~a~~~~w~f~~DD~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~  122 (300)
T d1di1a_          48 EVTCLYFPLALDDRIHFACRLLTVLFLIDDVLEHMSF-----ADGEAYNNRLIPISRGDVLPDRTKPEEFILYDLWESMR  122 (300)
T ss_dssp             HHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHHHSCH-----HHHHHHHHHHHHHHHTSSCCCTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHhhhhccCCh-----hhHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHH
Confidence            355566665   4445456667777788999996432     23445555555555444    23678888877766532


Q ss_pred             -CChHHH---HHHHHHHHhhc---cCCCCCCHHHHHHHHHHhchHHHHHHH-h-hhCCCCCCchhHHhHHHHHHHHHHHH
Q 016696          185 -LHIKPF---RDMIKGMRMDT---EKCRYANFQELYLYCYYAGGTVGLMSV-P-VMGMDPDSSASAQSIYNAALYLGIGN  255 (384)
Q Consensus       185 -L~~~~~---~~lI~g~~~DL---~~~~~~t~~dL~~Yc~~vAGtVG~l~l-~-ilg~~~~~~~~~~~~~~~A~~LG~Al  255 (384)
                       .....+   .+.+.++....   ....++|++|...+=..+.|.-..+.+ . .+|..-.. ...+.+.......+..+
T Consensus       123 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~psl~eYl~~R~~~~g~~~~~~l~e~~~g~~lp~-~~~~~~~~l~~~~~~~~  201 (300)
T d1di1a_         123 AHDAELANEVLEPTFVFMRAQTDRARLSIHELGHYLEYREKDVGKALLSALMRFSMGLRLSA-DELQDMKALEANCAKQL  201 (300)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCCCCCCCCSHHHHHHHHHTCHHHHHHHHHHHHHHTCCCCH-HHHHTTHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHcCCCCCH-HHHHHHHHHHHHHHHHH
Confidence             222333   33344433322   234577887777776666665433322 2 23433211 11222333334444444


Q ss_pred             HHHHHHHhHHHHHhcCC---------CCCCHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 016696          256 QLTNILRDVGEDASRGR---------IYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDK  326 (384)
Q Consensus       256 QLtNILRDv~eD~~~GR---------~YLP~d~L~~~Gvs~edl~~~~~~~~~~~li~~~~~~A~~~l~~A~~~~~~Lp~  326 (384)
                      .++|=|=....+...|-         +=+..=++.++|++.++         ..+.+.+++......|.+...-+...++
T Consensus       202 ~l~NDl~S~~KE~~~g~~~~~~~~~~~N~V~vl~~~~g~s~~e---------A~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (300)
T d1di1a_         202 SVVNDIYSYDKEEEASRTGHKEGAFLCSAVKVLAEESKLGIPA---------TKRVLWSMTREWETVHDEIVAEKIASPD  272 (300)
T ss_dssp             HHHHHHHHTTTTCCC----------CCCHHHHHHHHHTCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             HHHhhHHHHHHHHHhcccccccccccccHHHHHHHhcCCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            45543333333333321         13445567788888765         3445555555555555555544444444


Q ss_pred             cCc
Q 016696          327 ASR  329 (384)
Q Consensus       327 ~~r  329 (384)
                      ..+
T Consensus       273 ~~~  275 (300)
T d1di1a_         273 GCS  275 (300)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            444


No 6  
>d1rqja_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Escherichia coli [TaxId: 562]}
Probab=93.64  E-value=1.2  Score=39.91  Aligned_cols=74  Identities=15%  Similarity=0.126  Sum_probs=52.7

Q ss_pred             HHHHHHHhhccC-CCCCCHHHHHHHHHHhchHHHHHHHhhhCCC--CCCchhHHhHHHHHHHHHHHHHHHHHHHhHH
Q 016696          192 DMIKGMRMDTEK-CRYANFQELYLYCYYAGGTVGLMSVPVMGMD--PDSSASAQSIYNAALYLGIGNQLTNILRDVG  265 (384)
Q Consensus       192 ~lI~g~~~DL~~-~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~~--~~~~~~~~~~~~~A~~LG~AlQLtNILRDv~  265 (384)
                      .|++|...|+.. ....+++++....+.-.|+...+++.+.+.-  .......+.+...+.++|.|+|+.+=+-|+-
T Consensus       153 ~l~~GQ~ldl~~~~~~~~~~~~~~i~~~KT~~l~~~~~~~~a~~~~~~~~~~~~~l~~~g~~lGiaFQi~DD~lD~~  229 (299)
T d1rqja_         153 GMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVV  229 (299)
T ss_dssp             THHHHHHHHHHTTTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCcccHHHHHHHHHHHHhhHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            577888888854 3466888998888888888877777654421  1122223456779999999999998777764


No 7  
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=93.53  E-value=2.6  Score=38.24  Aligned_cols=201  Identities=11%  Similarity=0.085  Sum_probs=105.5

Q ss_pred             HHhcCChh---hhHHHHHHHHHHHHHhhhcCCCCCCCChHHHHHHHHHHHHHHH----cCCCCC--HHHHHHHHHHH---
Q 016696          114 GTLLLTKE---RQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF----NGHPND--ILDAALTDTVS---  181 (384)
Q Consensus       114 a~~~lP~~---~R~al~ALYAf~R~~DdivD~~~~~~~~~~rL~~Wr~~L~~~~----~g~p~~--Pv~~aL~~~v~---  181 (384)
                      ++.++||+   .|-.+.=.-.+.-.+||+-|.-.    +...|.-+-+++++--    ..-|..  .+..+|.+++.   
T Consensus        55 ~~~~feP~~s~~Ri~~aK~~~l~~iiDD~yD~yg----t~eEl~~ft~ai~rWd~~~~~~lp~ymk~~~~~l~~~~~e~~  130 (328)
T d1n1ba2          55 VGMFEPHQHGYQRKMAATIIVLATVIDDIYDVYG----TLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAA  130 (328)
T ss_dssp             HHHCCSTTCHHHHHHHHHHHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcChhhHHHHHHHHHHHHHHHhhhHHhcccC----CHHHHHHHHHHHHhcCCcccccCcchHHHHHHHHHHHHHHHH
Confidence            33466653   36666666667778899988743    2455666666665431    112322  34445544443   


Q ss_pred             -----hcCCC-----hHHHHHHHHHHHhhc---cCCCCCCHHHHHHHHHHhchHHHHHHHhhhCCCCCCchhHHhHHHHH
Q 016696          182 -----KFNLH-----IKPFRDMIKGMRMDT---EKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASAQSIYNAA  248 (384)
Q Consensus       182 -----~~~L~-----~~~~~~lI~g~~~DL---~~~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~~~~~~~~~~~~~~~A  248 (384)
                           .++..     ++.+.+++.++....   .....+|++|...-..-+.|....++...++..+...  .+++.+..
T Consensus       131 ~~~~~~~g~~~~~~lk~~w~~l~~ayl~EakW~~~g~vPt~eEYl~~~~vS~~~~~l~~~~~~~~~~~~~--~~~~~~~~  208 (328)
T d1n1ba2         131 YDILKEHGFFCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASH--DTAVIDSL  208 (328)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTCHHHHHHHHHTTSTTCCC--CHHHHHHH
T ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHhhceehhhHHHHHHHHHHhCCCccc--hHHHHHHH
Confidence                 23322     355566666664433   3446779999998888888866555555555433221  11223333


Q ss_pred             HHHHHHHHHHHHHH----hHHHHH-hcCCCCCCHH---HHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 016696          249 LYLGIGNQLTNILR----DVGEDA-SRGRIYLPQD---ELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEG  320 (384)
Q Consensus       249 ~~LG~AlQLtNILR----Dv~eD~-~~GR~YLP~d---~L~~~Gvs~edl~~~~~~~~~~~li~~~~~~A~~~l~~A~~~  320 (384)
                      .+-...+++++++-    |++-.- .+.|--++.-   .|.++|++.|+         ...-++.+++.+.+-+.+..--
T Consensus       209 ~~~p~~~~~~~~i~RL~nDi~~~~~E~~rg~~~s~v~cymke~~~s~ee---------A~~~i~~~ie~~wk~ln~e~l~  279 (328)
T d1n1ba2         209 YQYHDILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMKETNASEEE---------AVEHVKFLIREAWKDMNTAIAA  279 (328)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHC---------CCCCHHHHHHHHHCCCHHH---------HHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccHHHHHHHHHHHHHHhhhhhHHHHHhcCCcchHHHHHhccCCCCHHH---------HHHHHHHHHHHHHHHHHHHHcC
Confidence            33333333333333    333332 3444444433   58889999876         4556777777777776654322


Q ss_pred             hhhccccCc
Q 016696          321 ASELDKASR  329 (384)
Q Consensus       321 ~~~Lp~~~r  329 (384)
                      ...+|...+
T Consensus       280 ~~~vp~~~~  288 (328)
T d1n1ba2         280 GYPFPDGMV  288 (328)
T ss_dssp             CCSSCHHHH
T ss_pred             CCCCCHHHH
Confidence            233554443


No 8  
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=91.99  E-value=1.3  Score=40.33  Aligned_cols=194  Identities=11%  Similarity=0.076  Sum_probs=104.6

Q ss_pred             hHHHHHHHHHHHHHhhhcCCCCCCCChHHHHHHHHHHHHHHH----cCCCCC--HHHHHHHHHHHhc--------CCC--
Q 016696          123 QKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIF----NGHPND--ILDAALTDTVSKF--------NLH--  186 (384)
Q Consensus       123 R~al~ALYAf~R~~DdivD~~~~~~~~~~rL~~Wr~~L~~~~----~g~p~~--Pv~~aL~~~v~~~--------~L~--  186 (384)
                      |-.+.=+-.+.-.+||+-|...    +...|+-+-+++++.-    ..-|..  .+..+|-+++++.        +..  
T Consensus        67 R~~~aK~~~l~ti~DD~yD~yg----t~eEl~~ft~ai~rWd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~~~~~~  142 (328)
T d5easa2          67 RVMLVKTISMISIVDDTFDAYG----TVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIV  142 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC----CHHHHHHHHHHHHHTCSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGH
T ss_pred             HHHHHHHHHHHHhhhhhcccCC----CHHHHHHHHHHHhcCCcchhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCeeeH
Confidence            3334334444456677777533    2455666666666532    112432  3555565555432        211  


Q ss_pred             ---hHHHHHHHHHHHhh---ccCCCCCCHHHHHHHHHHhchHHHHHHHhhhCCCCCCchhH---HhHHHHHHHHHHHHHH
Q 016696          187 ---IKPFRDMIKGMRMD---TEKCRYANFQELYLYCYYAGGTVGLMSVPVMGMDPDSSASA---QSIYNAALYLGIGNQL  257 (384)
Q Consensus       187 ---~~~~~~lI~g~~~D---L~~~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~~~~~~~~~---~~~~~~A~~LG~AlQL  257 (384)
                         ++.+.+++.++...   ......+|++|...-...++|....++...++.........   ....+.....|.-..+
T Consensus       143 ~~l~~~w~~~~~~~l~EA~W~~~g~vPt~eEYl~~~~~s~~~~~l~~~~~~~~g~~~~e~~~~~~~~p~l~~~~~~i~RL  222 (328)
T d5easa2         143 CHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRV  222 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTGGGCHHHHHHHHHHTCTTCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCChHhhhcceeeeehHHHHHHHHHHhCCCCcHHHHHhcccchHHHHHHHHHHHH
Confidence               35566667666443   33567889999998887777777666666666543221110   0111233344444444


Q ss_pred             HHHHHhHHHHHhcCCCCCC-HHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCc
Q 016696          258 TNILRDVGEDASRGRIYLP-QDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDKASR  329 (384)
Q Consensus       258 tNILRDv~eD~~~GR~YLP-~d~L~~~Gvs~edl~~~~~~~~~~~li~~~~~~A~~~l~~A~~~~~~Lp~~~r  329 (384)
                      .|=+........+|-+-=- .-.|.++|+|.++         ..+-+.++++.+.+-+.+..---..+|....
T Consensus       223 ~NDi~s~~~E~~rG~~~s~I~cym~e~g~t~Ee---------A~~~i~~~ie~~wk~ln~e~l~~~~~~~~~~  286 (328)
T d5easa2         223 IDDTATYEVEKSRGQIATGIECCMRDYGISTKE---------AMAKFQNMAETAWKDINEGLLRPTPVSTEFL  286 (328)
T ss_dssp             HHHHHHHHHHHHTTCTTCHHHHHHHHHTCCHHH---------HHHHHHHHHHHHHHHHHHHTSSSCSSCGGGT
T ss_pred             HhhhHHHHHHhccCCCCeeEEEEecCCCCCHHH---------HHHHHHHHHHHHHHHHHHHHhCCCCCCHHHH
Confidence            4544445555566654111 2257889999876         4556788888887777654322223444443


No 9  
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]}
Probab=91.85  E-value=2.7  Score=38.67  Aligned_cols=163  Identities=10%  Similarity=0.107  Sum_probs=96.4

Q ss_pred             HhcCChhhhHHHHHHHHHHHHHhhhcCCCCCCCChHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHhc----C-----
Q 016696          115 TLLLTKERQKAIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLQDIFNGHP-NDILDAALTDTVSKF----N-----  184 (384)
Q Consensus       115 ~~~lP~~~R~al~ALYAf~R~~DdivD~~~~~~~~~~rL~~Wr~~L~~~~~g~p-~~Pv~~aL~~~v~~~----~-----  184 (384)
                      --.+|++.+..+...++|.-.+||+.|+..      ..|..+..   ++..|.+ .||++.++.+.....    +     
T Consensus        78 yp~~~~e~~~~Ial~t~~~~~lDD~~~~~~------~~l~~f~~---~l~~G~~q~~p~l~~f~~~L~~~~~~~g~~~~~  148 (354)
T d1kiya_          78 WAKVSKECMADLSIHYTYTLVLEDSKDDPY------PTMVNYFD---DLQAGREQAHPWWALVNEHFPNVLRHFGPFCSL  148 (354)
T ss_dssp             STTSCHHHHHHHHHHHHHHHHHTTCCSCSH------HHHTTHHH---HHHHTCCCSSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHhccccccch------HHHHHHHH---HHHcCCCCccHHHHHHHHHHHHHHHHcchHHHH
Confidence            346799999999999999999999998753      23433433   3344664 589998887766543    2     


Q ss_pred             CChHHHHHHHHHHHhhccC-CCCCCHHHHHHHHHHhchHHHHHHHhhhCCC--CCCchhHHhHHHHHHHHHHHHHHHHHH
Q 016696          185 LHIKPFRDMIKGMRMDTEK-CRYANFQELYLYCYYAGGTVGLMSVPVMGMD--PDSSASAQSIYNAALYLGIGNQLTNIL  261 (384)
Q Consensus       185 L~~~~~~~lI~g~~~DL~~-~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~~--~~~~~~~~~~~~~A~~LG~AlQLtNIL  261 (384)
                      .=.....++++|.-..... ..+++..+.-.|-....|.-....+-++...  |+.    ....+....+..+..++++.
T Consensus       149 ~i~~s~l~fv~a~~~E~~~~~~~p~s~~y~~yrR~~sG~~e~ya~f~fp~~~fpe~----~~~~~~~~ai~~~~~~i~~~  224 (354)
T d1kiya_         149 NLIRSTLDFFEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFNER----SLFLEITSAIAQMENWMVWV  224 (354)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCTTCTTHHHHHHHHHHCHHHHHHTTCCTTTCCTT----TSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHHhccCcHHHHHHHHcchhcCChH----HHHHHHHHHHHHHHHHHHHh
Confidence            0123345567766555433 3345555555555555555444444444322  222    12333333444445555555


Q ss_pred             HhHHH---HH--hcCCCCCCHHHHHhcCCChhhh
Q 016696          262 RDVGE---DA--SRGRIYLPQDELAKFGLRDEDI  290 (384)
Q Consensus       262 RDv~e---D~--~~GR~YLP~d~L~~~Gvs~edl  290 (384)
                      -||--   -.  ...+.-+.......+|++..+-
T Consensus       225 NDi~SfyKE~~~~ge~~N~V~vla~~~g~s~~eA  258 (354)
T d1kiya_         225 NDLMSFYKEFDDERDQISLVKNYVVSDEISLHEA  258 (354)
T ss_dssp             HHHHHHHHHHTCTTCCCCHHHHHHHHHTCCHHHH
T ss_pred             hhhhhcchhhhcCCCcccHHHHHHHHhCCCHHHH
Confidence            56543   22  3346777788888899998663


No 10 
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=90.93  E-value=0.75  Score=40.90  Aligned_cols=88  Identities=13%  Similarity=0.152  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHhhcc-CCCCCCHHHHHHHHHHhchHHHHHHHhhhCC-CCCCchhHHhHHHHHHHHHHHHHHHHHHHhHH-
Q 016696          189 PFRDMIKGMRMDTE-KCRYANFQELYLYCYYAGGTVGLMSVPVMGM-DPDSSASAQSIYNAALYLGIGNQLTNILRDVG-  265 (384)
Q Consensus       189 ~~~~lI~g~~~DL~-~~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~-~~~~~~~~~~~~~~A~~LG~AlQLtNILRDv~-  265 (384)
                      ....+..|.-.|+. .....|.+++..-++.-.|++..+++.+.+. .+..   .+.+.+.+.++|.|+|+.|=+-|+. 
T Consensus       127 ~~~~~~~Gq~~d~~~~~~~~t~~~y~~~i~~KT~~lf~~~~~~ga~l~g~~---~~~l~~~g~~lG~afQi~DD~ld~~~  203 (280)
T d1v4ea_         127 VIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGEL---GEDLYNLGVTIGTIYQMFDDIMDFAG  203 (280)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hcccchhHHHHHHHhccCCCCHHHHHHHHHhccccHHHHHHHHHHHHcccc---HHHHHHHHHHHHHHHHHHHhhccccc
Confidence            34456777777753 2334589999998888888887777664322 1111   1357889999999999998888763 


Q ss_pred             ---------HHHhcCCCCCCHHH
Q 016696          266 ---------EDASRGRIYLPQDE  279 (384)
Q Consensus       266 ---------eD~~~GR~YLP~d~  279 (384)
                               .|+..|++-+|.=.
T Consensus       204 ~~~~GK~~g~Dl~~gK~T~p~i~  226 (280)
T d1v4ea_         204 MEKIGKDGFLDLKNGVASFPLVT  226 (280)
T ss_dssp             CCSCCTTSSCCCTTTTCCHHHHH
T ss_pred             hhhhcccchhhHhCCCccHHHHH
Confidence                     35566666666543


No 11 
>d1rtra_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Staphylococcus aureus [TaxId: 1280]}
Probab=89.77  E-value=1.7  Score=38.52  Aligned_cols=123  Identities=15%  Similarity=0.122  Sum_probs=70.7

Q ss_pred             HHHHHHHhhccC-CCCCCHHHHHHHHHHhchHHHHHHHhhhCC-CCCCchhHHhHHHHHHHHHHHHHHHHHHHhHHHHHh
Q 016696          192 DMIKGMRMDTEK-CRYANFQELYLYCYYAGGTVGLMSVPVMGM-DPDSSASAQSIYNAALYLGIGNQLTNILRDVGEDAS  269 (384)
Q Consensus       192 ~lI~g~~~DL~~-~~~~t~~dL~~Yc~~vAGtVG~l~l~ilg~-~~~~~~~~~~~~~~A~~LG~AlQLtNILRDv~eD~~  269 (384)
                      .++.|...|+.. ...-+++++..-++..+|....+++.+.+. ...+....+.+.+.+.++|.|+|+.+=+-|+--|-.
T Consensus       148 ~~~~GQ~~Dl~~~~~~~~~~~~~~i~~~KT~~l~~~~~~~~a~~~~~~~~~~~~l~~~g~~lG~aFQi~DD~lD~~g~~~  227 (290)
T d1rtra_         148 GMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEA  227 (290)
T ss_dssp             THHHHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhHHHHHHhcccCCCHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence            467788888754 234588889888888888887766654332 122233445677899999999999987777643321


Q ss_pred             -cCCCCCCHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 016696          270 -RGRIYLPQDELAKFGLRDEDIFSRKVSDEWREFMKEQITRARYFYKLAEEGASELDK  326 (384)
Q Consensus       270 -~GR~YLP~d~L~~~Gvs~edl~~~~~~~~~~~li~~~~~~A~~~l~~A~~~~~~Lp~  326 (384)
                       .|+            -.-.|+..|+.+=-+.-.+...-+++..+..++.+.+..++.
T Consensus       228 ~~GK------------~~g~Di~~gK~T~p~i~a~~~a~~~~~~~~~~~~~~l~~~~~  273 (290)
T d1rtra_         228 KLGK------------KVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDE  273 (290)
T ss_dssp             C-------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred             hhcc------------CcccHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence             111            011345555544333323333444566667777666666554


No 12 
>d2p0ta1 a.290.1.1 (A:22-169) Uncharacterized protein PSPTO4464 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=49.62  E-value=14  Score=29.27  Aligned_cols=62  Identities=21%  Similarity=0.379  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhcC-CChHHHHHHHHHHHhhccC-CCCCCHHHHHHHHHHhc
Q 016696          151 AALDRWEERLQDIFNGHPNDILDAALTDTVSKFN-LHIKPFRDMIKGMRMDTEK-CRYANFQELYLYCYYAG  220 (384)
Q Consensus       151 ~rL~~Wr~~L~~~~~g~p~~Pv~~aL~~~v~~~~-L~~~~~~~lI~g~~~DL~~-~~~~t~~dL~~Yc~~vA  220 (384)
                      -.+..|++.|-  -.|      ..+|.+.+..|| .+.+.++.+|..-...... .+....-+|..|...++
T Consensus        82 h~lE~wRdrLi--~~~------~~al~e~~~~~P~~DrQ~LRqLiR~A~kE~~~~k~~k~~R~LF~~Lrel~  145 (148)
T d2p0ta1          82 HNLERWRDRLI--AGD------DADLEKFVIEYPDADRQQLRSLIRQAQHEVARNKPPATSRKIFKYIRELD  145 (148)
T ss_dssp             HHHHHHHHHHH--HSC------HHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HCC------HHHHHHHHHHCcchHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence            47889999884  233      247888899985 8999999999998877754 45667889999987654


Done!