Query 016702
Match_columns 384
No_of_seqs 299 out of 1298
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 18:02:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016702.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016702hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qmwa1 c.94.1.1 (A:1-184) Pre 100.0 1.6E-60 1.1E-64 433.3 18.1 177 98-278 1-179 (184)
2 d2qmwa2 d.58.18.3 (A:185-264) 99.9 2.8E-25 2E-29 174.8 10.3 77 288-379 4-80 (80)
3 d1phza1 d.58.18.3 (A:19-115) P 99.9 8E-24 5.8E-28 172.1 10.4 83 283-381 13-96 (97)
4 d2d8da1 a.130.1.1 (A:3-82) Cho 98.4 1.7E-08 1.3E-12 77.5 -0.4 51 37-87 12-67 (80)
5 d1ybza1 a.130.1.1 (A:2-75) mon 98.1 2.7E-07 1.9E-11 69.9 0.9 41 37-77 12-57 (74)
6 d1ecma_ a.130.1.1 (A:) Chorism 98.0 1.5E-07 1.1E-11 73.6 -1.6 50 37-86 12-67 (91)
7 d2h9da1 a.130.1.1 (A:1-94) Sal 97.8 2.5E-06 1.8E-10 67.2 2.1 50 37-86 19-73 (94)
8 d2gtvx1 a.130.1.3 (X:1-93) Cho 97.5 3.9E-06 2.8E-10 65.9 -1.3 50 37-86 14-77 (93)
9 d2f1fa1 d.58.18.6 (A:2-77) Ace 97.2 0.0013 9.7E-08 49.3 10.2 72 286-374 1-72 (76)
10 d1y7pa2 d.58.18.12 (A:2-78) Hy 97.2 0.00065 4.7E-08 50.9 8.2 67 287-369 2-68 (77)
11 d2fgca2 d.58.18.6 (A:27-104) A 97.1 0.0022 1.6E-07 48.3 10.1 72 286-374 3-74 (78)
12 d2pc6a2 d.58.18.6 (A:1-77) Ace 97.1 0.002 1.5E-07 48.3 9.9 72 286-374 2-73 (77)
13 d1zpva1 d.58.18.7 (A:1-83) UPF 96.7 0.0048 3.5E-07 46.2 9.5 68 286-368 2-69 (83)
14 d1sc6a3 d.58.18.1 (A:327-410) 96.7 0.0063 4.6E-07 45.9 10.1 65 286-369 11-75 (84)
15 d1ygya3 d.58.18.1 (A:452-529) 96.5 0.0068 4.9E-07 45.1 9.1 63 287-366 4-67 (78)
16 d2fp1a1 a.130.1.4 (A:35-199) S 96.4 0.00038 2.8E-08 59.8 1.3 47 40-86 6-58 (165)
17 d2f06a2 d.58.18.11 (A:1-70) Hy 96.3 0.0081 5.9E-07 44.0 8.3 36 289-324 6-41 (70)
18 d2f06a1 d.58.18.11 (A:71-141) 96.1 0.0062 4.5E-07 44.6 6.6 36 289-324 2-37 (71)
19 d1u8sa1 d.58.18.5 (A:2-87) put 96.0 0.012 9.1E-07 44.2 8.2 64 288-368 5-71 (86)
20 d1u8sa2 d.58.18.5 (A:88-180) p 94.0 0.14 1.1E-05 38.5 8.9 35 287-321 7-41 (93)
21 d1wdna_ c.94.1.1 (A:) Glutamin 89.5 1.6 0.00011 35.9 11.2 98 97-212 106-203 (223)
22 d1xt8a1 c.94.1.1 (A:10-257) Pu 88.7 0.28 2E-05 42.4 5.8 49 97-147 120-168 (248)
23 d1tdja2 d.58.18.2 (A:336-423) 81.9 1.4 0.0001 32.9 6.0 65 287-369 4-68 (88)
24 d1ii5a_ c.94.1.1 (A:) Glutamat 77.9 12 0.0009 30.1 11.8 117 120-250 45-169 (226)
25 d2cdqa2 d.58.18.10 (A:329-419) 74.2 4.3 0.00032 30.0 6.8 63 293-375 23-89 (91)
26 d1ixca2 c.94.1.1 (A:90-294) Ly 73.9 16 0.0012 27.7 11.2 142 97-249 3-160 (205)
27 d1xs5a_ c.94.1.1 (A:) Putative 71.7 1.7 0.00012 37.0 4.4 87 96-193 3-98 (240)
28 d1tdja3 d.58.18.2 (A:424-514) 63.6 2.2 0.00016 32.0 3.0 37 287-324 11-47 (91)
29 d1ve4a1 c.94.1.1 (A:1-206) ATP 63.4 13 0.00098 31.4 8.6 142 96-257 4-171 (206)
30 d2ozza1 c.94.1.1 (A:1-228) Hyp 59.8 6.8 0.0005 32.9 6.0 48 97-147 109-159 (228)
31 d1al3a_ c.94.1.1 (A:) Cofactor 56.5 39 0.0028 27.3 10.4 121 117-247 31-161 (237)
32 d1ii5a_ c.94.1.1 (A:) Glutamat 50.0 8.9 0.00065 31.1 5.0 47 97-147 116-162 (226)
33 d1p99a_ c.94.1.1 (A:) Putative 49.7 4 0.00029 34.7 2.7 50 98-148 2-55 (255)
34 d1us5a_ c.94.1.1 (A:) Putative 48.9 11 0.00077 32.8 5.5 50 97-147 115-171 (298)
35 d2hmfa3 d.58.18.10 (A:304-403) 46.9 12 0.00085 27.9 4.7 30 293-322 25-54 (100)
36 d2cdqa3 d.58.18.10 (A:420-494) 42.3 22 0.0016 25.0 5.4 37 286-322 3-39 (75)
37 d2esna2 c.94.1.1 (A:92-303) Pr 41.6 3.3 0.00024 32.9 0.7 127 116-250 32-167 (212)
38 d2hmfa2 d.58.18.10 (A:404-470) 41.6 30 0.0022 23.6 5.9 29 293-321 11-39 (67)
39 d1o63a_ c.94.1.1 (A:) ATP phos 37.2 17 0.0012 30.6 4.7 116 128-259 44-166 (203)
40 d1z7me1 c.94.1.1 (E:1-204) ATP 35.2 49 0.0036 27.6 7.5 142 98-257 2-173 (204)
41 d1nh8a1 c.94.1.1 (A:1-210) ATP 33.8 37 0.0027 28.5 6.5 115 129-260 50-175 (210)
42 d1qnta2 c.55.7.1 (A:6-91) O6-a 33.0 5.2 0.00038 29.6 0.5 19 195-213 46-64 (86)
43 d1h3da1 c.94.1.1 (A:5-224) ATP 32.9 31 0.0022 29.3 5.8 112 128-256 50-182 (220)
44 d2fyia1 c.94.1.1 (A:88-307) Ly 31.8 1.1E+02 0.0077 23.7 13.1 120 117-246 31-160 (220)
45 d1lsta_ c.94.1.1 (A:) Lysine-, 29.3 31 0.0022 27.6 5.0 48 97-146 111-160 (238)
46 d1i6aa_ c.94.1.1 (A:) Hydrogen 28.0 37 0.0027 26.0 5.2 143 94-246 3-158 (212)
47 d3dhxa1 d.58.18.13 (A:2-100) M 26.7 40 0.0029 24.5 4.8 31 344-376 65-95 (99)
48 d2abwa1 c.23.16.1 (A:2-219) Py 25.4 27 0.002 28.3 4.0 45 97-147 2-49 (218)
49 d1utha_ c.94.1.1 (A:) LysR-typ 25.0 40 0.0029 26.2 4.9 146 94-250 10-168 (219)
50 d2qrra1 d.58.18.13 (A:2-98) Me 24.3 48 0.0035 24.0 4.8 58 299-376 35-94 (97)
51 d2qswa1 d.58.18.13 (A:256-345) 22.9 44 0.0032 23.9 4.3 31 344-376 58-88 (90)
52 d1vpha_ d.273.1.1 (A:) Hypothe 22.4 15 0.0011 29.1 1.6 18 333-353 109-126 (138)
53 d1xt8a1 c.94.1.1 (A:10-257) Pu 22.2 1.8E+02 0.013 23.2 9.9 109 121-247 55-172 (248)
54 d1npya2 c.58.1.5 (A:1-102) Shi 21.4 81 0.0059 22.8 5.7 48 95-142 5-58 (102)
No 1
>d2qmwa1 c.94.1.1 (A:1-184) Prephenate dehydratase {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=1.6e-60 Score=433.32 Aligned_cols=177 Identities=27% Similarity=0.371 Sum_probs=168.8
Q ss_pred eEEEEECCCCcHHHHHHHHHCCC--CcccCCCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCeEEEEEEE
Q 016702 98 VRISFKGLPGSFSEDAALKAYPK--CETVPCDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRLHIVGEVQ 175 (384)
Q Consensus 98 ~~Va~LGP~GTfS~~AA~~~f~~--~~~~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l~I~gEi~ 175 (384)
|||+||||+|||||+||+++|+. .+++||.||+|||++|++|++||||||||||++|+|.+|||+|.+++++|+||+.
T Consensus 1 mki~yLGp~GtfS~~Aa~~~f~~~~~~~~~~~s~~~v~~av~~~~~d~gvvPiENS~~G~V~~t~D~L~~~~~~I~~E~~ 80 (184)
T d2qmwa1 1 MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIR 80 (184)
T ss_dssp CEEEEECSTTSHHHHHHHHHCCTTSSEEEEESSHHHHHHHHHHCSSEEEEEEEESCSSSCSHHHHHHHHTTSSEEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHhcccCCceeeecCCHHHHHHHHHcCCCceeEEEeecccccchHHHHHhhhccCceeEeeec
Confidence 79999999999999999999985 5789999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeeecCCCCCcCCccEEEecHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHhcCCCCeEEEcCHHHHHHcCCcee
Q 016702 176 LAANFCLLALPGIKADQLKRVLSHPQALASSDIVLTQLGVARENVDDTASAAQYVASNGLRDAGAVASARAAEIYGLNIL 255 (384)
Q Consensus 176 l~I~h~Ll~~~g~~l~~I~~VySHpqAl~QC~~fL~~~~~~~i~~~STA~AA~~v~~~~~~~~AAIas~~aA~~ygL~il 255 (384)
+||+|||+++++.++++|++|||||||++||++||+++.++.+.++||++||+.+. ++.|||||+.||++|||+||
T Consensus 81 l~I~h~Ll~~~~~~l~~I~~V~SHpqal~QC~~~l~~~~~~~~~~~sta~aa~~~~----~~~aAIas~~aa~~ygL~il 156 (184)
T d2qmwa1 81 LDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIE----NGVAAIAPLGSGEAYGFTPI 156 (184)
T ss_dssp EECCEEEECCSSCCSTTCCEEEECHHHHHHSHHHHHHTTCEEEECSSHHHHHHTCB----TTEEEEEETTTSGGGTCCEE
T ss_pred ccchhhhcccccccccccceEEEecchHHHHHHHHHhhccchhhhhhHHHHHhhhh----hhhhccccHhHHHHcCChhh
Confidence 99999999999999999999999999999999999999888889999999998653 46899999999999999999
Q ss_pred eccccCCCCCeeEEEEEeeCCCC
Q 016702 256 ADRIQDEPDNITRFLVLARDPII 278 (384)
Q Consensus 256 ~~~I~D~~~N~TRF~vi~~~~~~ 278 (384)
+++|||.++|+|||+||+|++..
T Consensus 157 ~~~I~D~~~N~TRF~vi~~~~~~ 179 (184)
T d2qmwa1 157 DTHIEDYPHNVTRFLVIKNQQQF 179 (184)
T ss_dssp EECCCSCSCCEEEEEEEESCCCC
T ss_pred hhCCCCCCCCeEeEEEEecCCcC
Confidence 99999999999999999998654
No 2
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=99.92 E-value=2.8e-25 Score=174.78 Aligned_cols=77 Identities=25% Similarity=0.487 Sum_probs=70.3
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHHHH
Q 016702 288 SIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHLQE 367 (384)
Q Consensus 288 sl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L~~ 367 (384)
.+++...|+||+|+++|++|+++|||||||||||+++.+ |+|.||||++||.+ ++++++|++|++
T Consensus 4 ~~i~~~~d~pGaL~~vL~~F~~~~INLt~IeSRP~~~~~--------------~~Y~F~id~~g~~~-~~~~~~l~~L~~ 68 (80)
T d2qmwa2 4 FLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQL--------------GMYRFFVQADSAIT-TDIKKVIAILET 68 (80)
T ss_dssp EEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSST--------------TCEEEEEEESCCSC-HHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHCCCCEEEEEeeecCCCC--------------ceEEEEEEEecCCc-HHHHHHHHHHHH
Confidence 345556799999999999999999999999999999875 99999999999975 579999999999
Q ss_pred hcCceEEEcccc
Q 016702 368 FATFLRVLGCYP 379 (384)
Q Consensus 368 ~~~~vkvLGsYp 379 (384)
.+.++|+||+|-
T Consensus 69 ~~~~~kvLGsY~ 80 (80)
T d2qmwa2 69 LDFKVEMIGAFN 80 (80)
T ss_dssp TTEEEEEEEEEC
T ss_pred hcCcEEEEEEeC
Confidence 999999999993
No 3
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.89 E-value=8e-24 Score=172.08 Aligned_cols=83 Identities=29% Similarity=0.415 Sum_probs=73.8
Q ss_pred CCceEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHH
Q 016702 283 KLFKTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNAL 362 (384)
Q Consensus 283 ~~~Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al 362 (384)
..+||||+|+++|+||+|+++|++|+++|||||+|||||+++.+ |+|.|||||+|| .|++++.+|
T Consensus 13 ~~~ktSl~f~~~~~pGaL~~vL~~f~~~~INLt~IeSRP~~~~~--------------~~Y~F~id~eg~-~~~~i~~~l 77 (97)
T d1phza1 13 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNK--------------DEYEFFTYLDKR-TKPVLGSII 77 (97)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCT--------------TEEEEEECBCGG-GHHHHHHHH
T ss_pred CCCcEEEEEEeCCCCCHHHHHHHHHHHCCCCEEEEEeeccCCCC--------------ceEEEEEEcccC-ChHHHHHHH
Confidence 35799999999999999999999999999999999999998875 999999999999 588999999
Q ss_pred HHHHHhc-CceEEEccccCC
Q 016702 363 GHLQEFA-TFLRVLGCYPMD 381 (384)
Q Consensus 363 ~~L~~~~-~~vkvLGsYp~~ 381 (384)
+.|+..| ..|++| |+++.
T Consensus 78 ~~L~~~~~~~v~~l-s~~k~ 96 (97)
T d1phza1 78 KSLRNDIGATVHEL-SRDKE 96 (97)
T ss_dssp HHHHHTTCCCEEEE-ETTCC
T ss_pred HHHHHhhCcEEEEc-cccCC
Confidence 9998765 456777 45553
No 4
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=98.37 E-value=1.7e-08 Score=77.48 Aligned_cols=51 Identities=8% Similarity=-0.097 Sum_probs=46.8
Q ss_pred cchhhHHHHHHHHHHHHHHhhhccCCCC--C--C-chhHHHHHhhhhCCCCCCccc
Q 016702 37 VCRGGFSGLSGDSVIKSADNQNTGKSSN--V--N-DVPGKLCKDLISLPKPLTVAD 87 (384)
Q Consensus 37 ~~~~~il~LLn~Ra~~a~eig~~K~~~~--~--~-RE~~il~~~~~~n~GPL~~e~ 87 (384)
.+|.+|++||++|+.++.+||++|...| + | ||++++.++...++++++++.
T Consensus 12 ~iD~~i~~Ll~~R~~~~~~i~~~K~~~~~~i~~~~RE~~v~~~~~~~~~~~l~~~~ 67 (80)
T d2d8da1 12 RVNREILRLLSERGRLVQEIGRLQTELGLPHYDPKREEEMLAYLTAENPGPFPDET 67 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHCCSSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHhcCCCCHHH
Confidence 6899999999999999999999999887 3 4 999999999999999998764
No 5
>d1ybza1 a.130.1.1 (A:2-75) mono-domain chorismate mutase {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.10 E-value=2.7e-07 Score=69.87 Aligned_cols=41 Identities=10% Similarity=-0.076 Sum_probs=37.5
Q ss_pred cchhhHHHHHHHHHHHHHHhhhccCCCC--C--C-chhHHHHHhhh
Q 016702 37 VCRGGFSGLSGDSVIKSADNQNTGKSSN--V--N-DVPGKLCKDLI 77 (384)
Q Consensus 37 ~~~~~il~LLn~Ra~~a~eig~~K~~~~--~--~-RE~~il~~~~~ 77 (384)
.+|.+|++||++|+++|.+||++|++.| + | ||++++.++..
T Consensus 12 ~iD~~i~~Ll~~R~~~~~~I~~~K~~~~~~i~dp~RE~~il~~~~~ 57 (74)
T d1ybza1 12 KIDNQIISLLKKRLEIAQAIGKIKKELNLPIEDRKREEEVLRRAGE 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Confidence 7899999999999999999999999888 3 4 99999999854
No 6
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=98.04 E-value=1.5e-07 Score=73.64 Aligned_cols=50 Identities=10% Similarity=-0.082 Sum_probs=44.1
Q ss_pred cchhhHHHHHHHHHHHHHHhhhccCCCC--C--C-chhHHHHHhhhhCCCC-CCcc
Q 016702 37 VCRGGFSGLSGDSVIKSADNQNTGKSSN--V--N-DVPGKLCKDLISLPKP-LTVA 86 (384)
Q Consensus 37 ~~~~~il~LLn~Ra~~a~eig~~K~~~~--~--~-RE~~il~~~~~~n~GP-L~~e 86 (384)
.+|.+|++||++|+.++.+||++|...| + + ||++++.++...+.++ |+++
T Consensus 12 ~iD~~i~~Ll~~R~~l~~~I~~~K~~~~~~i~d~~RE~~il~~~~~~~~~~~l~~~ 67 (91)
T d1ecma_ 12 ALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLITLGKAHHLDAH 67 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHhhcCCcCHH
Confidence 7899999999999999999999999888 3 4 9999999999877765 6554
No 7
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=97.83 E-value=2.5e-06 Score=67.19 Aligned_cols=50 Identities=10% Similarity=-0.087 Sum_probs=37.2
Q ss_pred cchhhHHHHHHHHHHHHHHhhhccCCCC-C--C-chhHHHHHhhhh-CCCCCCcc
Q 016702 37 VCRGGFSGLSGDSVIKSADNQNTGKSSN-V--N-DVPGKLCKDLIS-LPKPLTVA 86 (384)
Q Consensus 37 ~~~~~il~LLn~Ra~~a~eig~~K~~~~-~--~-RE~~il~~~~~~-n~GPL~~e 86 (384)
.+|.+|++||.+|+.++.+||++|+..+ + + ||++++.++.+. ....++.+
T Consensus 19 ~ID~~i~~LL~~R~~l~~~i~~~K~~~~~v~d~~Re~~vl~~~~~~a~~~gl~~~ 73 (94)
T d2h9da1 19 RIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAP 73 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC----------CHHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcHHHHHHHHHHHHHHHhhCCcCHH
Confidence 6899999999999999999999998777 3 4 999999998765 34456654
No 8
>d2gtvx1 a.130.1.3 (X:1-93) Chorismate mutase-like protein MJ0246 {Methanococcus jannaschii [TaxId: 2190]}
Probab=97.50 E-value=3.9e-06 Score=65.90 Aligned_cols=50 Identities=4% Similarity=-0.172 Sum_probs=42.1
Q ss_pred cchhhHH--------HHHHHHHHHHHHhhhccCCCC--C--C-chhHHHHHhhhh-CCCCCCcc
Q 016702 37 VCRGGFS--------GLSGDSVIKSADNQNTGKSSN--V--N-DVPGKLCKDLIS-LPKPLTVA 86 (384)
Q Consensus 37 ~~~~~il--------~LLn~Ra~~a~eig~~K~~~~--~--~-RE~~il~~~~~~-n~GPL~~e 86 (384)
.+|.+|+ +||++|+.++.+||++|.+.| + + ||++++.++... ....|+++
T Consensus 14 ~iD~~ii~~~~~~~~~Ll~~R~~l~~~I~~~K~~~~~pi~d~~RE~~vl~~~~~~a~~~~l~~~ 77 (93)
T d2gtvx1 14 EIDNKILKARWPWAEKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDEN 77 (93)
T ss_dssp HHHHHHHTSSSSSCCCCHHHHHHHHHHHHHHHHHHTSCSCCHHHHHHHHHHHHHHHHHHTSCSH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhhhCCcCHH
Confidence 7899999 699999999999999998887 3 4 999999998774 34456654
No 9
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=97.24 E-value=0.0013 Score=49.27 Aligned_cols=72 Identities=17% Similarity=0.268 Sum_probs=57.1
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHH
Q 016702 286 KTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHL 365 (384)
Q Consensus 286 Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L 365 (384)
|-+|.+.+.|+||.|.++-..|++||+|+..|-.-|+... .-..|-|-++| +|..+.++.++|
T Consensus 1 khtlsv~v~N~~GVL~RisglF~rRg~NI~Sl~v~~te~~---------------~iSR~tivv~~--~~~~i~qi~kQL 63 (76)
T d2f1fa1 1 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDP---------------TLSRMTIQTVG--DEKVLEQIEKQL 63 (76)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCS---------------SEEEEEEEEES--CHHHHHHHHHHH
T ss_pred CEEEEEEEECCCcHHHHHHHHHHhcCcceEEEEEcccCCC---------------CeeEEEEEEEC--CHHHHHHHHHHH
Confidence 4567777899999999999999999999999999998653 23456677777 467888899999
Q ss_pred HHhcCceEE
Q 016702 366 QEFATFLRV 374 (384)
Q Consensus 366 ~~~~~~vkv 374 (384)
.+.-.=+++
T Consensus 64 ~KlidV~~V 72 (76)
T d2f1fa1 64 HKLVDVLRV 72 (76)
T ss_dssp HHSTTEEEE
T ss_pred hCCCCEEEE
Confidence 987664443
No 10
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.20 E-value=0.00065 Score=50.90 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=44.7
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHHH
Q 016702 287 TSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHLQ 366 (384)
Q Consensus 287 tsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L~ 366 (384)
+.|.+...|+||.|.++.+.|+.+++|+..|.++...... ....|.|+++.... .+..++++|+
T Consensus 2 ~~i~i~~~Dr~GlL~di~~~ia~~~~NI~~i~~~~~~~g~--------------~~~~~~i~v~~~~~--~l~~ll~kL~ 65 (77)
T d1y7pa2 2 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGE--------------HEGKALIYFEIEGG--DFEKILERVK 65 (77)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSST--------------TTTEEEEEEEECSS--CHHHHHHHHH
T ss_pred eeEEEEEecCCChHHHHHHHHHHcCCCeEEEEeeccCCCe--------------EEEEEEEEEEcCcc--cHHHHHHHHH
Confidence 3567788999999999999999999999999988654432 23445555544321 2677888887
Q ss_pred Hhc
Q 016702 367 EFA 369 (384)
Q Consensus 367 ~~~ 369 (384)
+.-
T Consensus 66 ~l~ 68 (77)
T d1y7pa2 66 TFD 68 (77)
T ss_dssp TCT
T ss_pred cCC
Confidence 653
No 11
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=97.09 E-value=0.0022 Score=48.25 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=57.0
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHH
Q 016702 286 KTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHL 365 (384)
Q Consensus 286 Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L 365 (384)
|..|.+-+.|+||.|.++-..|+.||+|+..|-.-|+... .-..+-|-++| +|..+.++.++|
T Consensus 3 ~~tisvlv~n~pGvL~Ri~~lF~rRg~NI~SL~v~~te~~---------------~iSR~tivv~g--~~~~i~qi~kQl 65 (78)
T d2fgca2 3 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETP---------------GLSRLVIMVKG--DDKTIEQIEKQA 65 (78)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSST---------------TEEEEEEEEEE--CTTHHHHHHHHH
T ss_pred eEEEEEEEeCCCcHHHHHHHHHhhCCcceEEEEEeecCCC---------------CeEEEEEEEEc--CHHHHHHHHHHH
Confidence 4566777789999999999999999999999998897653 23456667777 456788999999
Q ss_pred HHhcCceEE
Q 016702 366 QEFATFLRV 374 (384)
Q Consensus 366 ~~~~~~vkv 374 (384)
++.-.=+++
T Consensus 66 ~KlidV~~V 74 (78)
T d2fgca2 66 YKLVEVVKV 74 (78)
T ss_dssp TTSTTEEEE
T ss_pred hCCcCEEEE
Confidence 887665444
No 12
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=97.08 E-value=0.002 Score=48.32 Aligned_cols=72 Identities=13% Similarity=0.243 Sum_probs=57.1
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHH
Q 016702 286 KTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHL 365 (384)
Q Consensus 286 Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L 365 (384)
|-.|.+.+.|+||.|.++-..|+.||+|+..|-.=|+... .-..+-|-++| +|..+.++.++|
T Consensus 2 k~tisv~veN~pGvL~Ris~lF~rRg~NI~Sltv~~te~~---------------~iSRmtivv~~--~~~~i~qi~kQL 64 (77)
T d2pc6a2 2 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDP---------------TLSRMTLVTNG--PDEIVEQITKQL 64 (77)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSST---------------TEEEEEEEEEE--CHHHHHHHHHHH
T ss_pred cEEEEEEEECCccHHHHHHHHHhccCcceEEEEEeccCCC---------------CeEEEEEEEEC--CHHHHHHHHHHH
Confidence 4466777889999999999999999999999999997653 22456666666 457888999999
Q ss_pred HHhcCceEE
Q 016702 366 QEFATFLRV 374 (384)
Q Consensus 366 ~~~~~~vkv 374 (384)
++.-.=+++
T Consensus 65 ~KlvdVi~V 73 (77)
T d2pc6a2 65 NKLIEVVKL 73 (77)
T ss_dssp HHSTTEEEE
T ss_pred hCCcCEEEE
Confidence 987665554
No 13
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.73 E-value=0.0048 Score=46.16 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=51.1
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHH
Q 016702 286 KTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHL 365 (384)
Q Consensus 286 Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L 365 (384)
|.-|.+.-+|+||-++++-+.++.+|+|+..++.....+ .+-..+.++++...+-..+++.|+.+
T Consensus 2 k~vitv~g~DrpGiVa~vt~~l~~~g~NI~d~~q~~~~~---------------~f~~~~~v~~~~~~~~~~l~~~l~~l 66 (83)
T d1zpva1 2 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDE---------------YFTMMAVVSSDEKQDFTYLRNEFEAF 66 (83)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETT---------------EEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCCHHHHHHHHHHHCCCeEEEEEeEEeCC---------------EEEEEEEEEEecCCCHHHHHHHHHHH
Confidence 444566679999999999999999999999998876432 24556666776655557788888777
Q ss_pred HHh
Q 016702 366 QEF 368 (384)
Q Consensus 366 ~~~ 368 (384)
.+.
T Consensus 67 a~~ 69 (83)
T d1zpva1 67 GQT 69 (83)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 14
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=96.72 E-value=0.0063 Score=45.86 Aligned_cols=65 Identities=23% Similarity=0.382 Sum_probs=50.9
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHH
Q 016702 286 KTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHL 365 (384)
Q Consensus 286 Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L 365 (384)
...|++...|+||.|.++-+.|+++|||+..+.+..... ..|. .+|++. +++..++++++|
T Consensus 11 ~~rl~i~~~d~PGvla~I~~~l~~~~iNI~~~~~~~~~~----------------~~~a-~~~i~~--D~~~~~~v~~~i 71 (84)
T d1sc6a3 11 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQ----------------MGYV-VIDIEA--DEDVAEKALQAM 71 (84)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSS----------------EEEE-EEEEEC--CHHHHHHHHHHH
T ss_pred CeEEEEEeCCcCCHHHHHHHHHHHcCCCHHHhccccCCC----------------CcEE-EEEEEC--CCCCHHHHHHHH
Confidence 467778889999999999999999999999998775432 3465 578875 456677788888
Q ss_pred HHhc
Q 016702 366 QEFA 369 (384)
Q Consensus 366 ~~~~ 369 (384)
++.-
T Consensus 72 ~~l~ 75 (84)
T d1sc6a3 72 KAIP 75 (84)
T ss_dssp HTST
T ss_pred HCCC
Confidence 7653
No 15
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.55 E-value=0.0068 Score=45.13 Aligned_cols=63 Identities=10% Similarity=0.173 Sum_probs=46.4
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceeeeeee-eeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHH
Q 016702 287 TSIVFTLDEGPGVLFKALAVFALREINLTKIES-RPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHL 365 (384)
Q Consensus 287 tsl~f~~~~~pGaL~~~L~~F~~~~INLtkIES-RP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L 365 (384)
+.|++...|+||.|.++-+.|+++|||+..+.- |..++ ..-+..+++++... +.+.+.|+++
T Consensus 4 ~~L~i~~~D~PGvi~~I~~~l~~~~iNI~~m~~~~~~~g----------------~~a~~vi~vD~~~~-~~vl~~I~~~ 66 (78)
T d1ygya3 4 INLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEG----------------PGATILLRLDQDVP-DDVRTAIAAA 66 (78)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSS----------------SCEEEEEEESSCCC-HHHHHHHHHH
T ss_pred eEEEEEeCCcCCHHHHHHHHHHhcCcChhhheeeecCCC----------------CeEEEEEEcCCCcc-HHHHHHHHcC
Confidence 678888899999999999999999999999874 55443 22456788887654 3343444444
Q ss_pred H
Q 016702 366 Q 366 (384)
Q Consensus 366 ~ 366 (384)
.
T Consensus 67 ~ 67 (78)
T d1ygya3 67 V 67 (78)
T ss_dssp H
T ss_pred C
Confidence 3
No 16
>d2fp1a1 a.130.1.4 (A:35-199) Secreted chorismate mutase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.42 E-value=0.00038 Score=59.80 Aligned_cols=47 Identities=6% Similarity=-0.022 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCC--C--C-chhHHHHHhhhhCC-CCCCcc
Q 016702 40 GGFSGLSGDSVIKSADNQNTGKSSN--V--N-DVPGKLCKDLISLP-KPLTVA 86 (384)
Q Consensus 40 ~~il~LLn~Ra~~a~eig~~K~~~~--~--~-RE~~il~~~~~~n~-GPL~~e 86 (384)
.+|++||+||+.++.+||++|...| | + ||++||.++..... ..|+.+
T Consensus 6 ~eLv~ll~eRl~la~~Va~~K~~~~~pI~Dp~RE~~Vl~~~~~~A~~~gLd~~ 58 (165)
T d2fp1a1 6 AELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPD 58 (165)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHcCCCHH
Confidence 5899999999999999999998877 4 3 99999999876533 336554
No 17
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=96.34 E-value=0.0081 Score=44.01 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=31.7
Q ss_pred EEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCC
Q 016702 289 IVFTLDEGPGVLFKALAVFALREINLTKIESRPQRK 324 (384)
Q Consensus 289 l~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~ 324 (384)
|.+-+.|+||.|.++.+.|+++|||+..|---|+..
T Consensus 6 isV~~eNkpG~L~~v~~~~~~~~inI~sl~v~~t~~ 41 (70)
T d2f06a2 6 LSIFLENKSGRLTEVTEVLAKENINLSALCIAENAD 41 (70)
T ss_dssp EEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSS
T ss_pred EEEEEeCCCcHHHHHHHHHHHCCCCEEEEEEeecCC
Confidence 556678999999999999999999999998888654
No 18
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=96.13 E-value=0.0062 Score=44.62 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=31.9
Q ss_pred EEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCC
Q 016702 289 IVFTLDEGPGVLFKALAVFALREINLTKIESRPQRK 324 (384)
Q Consensus 289 l~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~ 324 (384)
|.+.++|+||.|.++++.|+++|||+..+..-++++
T Consensus 2 iaV~v~d~pG~L~~v~~~L~~~~InI~~~y~~~~~~ 37 (71)
T d2f06a1 2 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNN 37 (71)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETT
T ss_pred EEEEecCCccHHHHHHHHHHHCCCCEEEEEEEcCCC
Confidence 456789999999999999999999999998887653
No 19
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=96.04 E-value=0.012 Score=44.19 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=43.6
Q ss_pred EEEEEe--CCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCc-HHHHHHHHH
Q 016702 288 SIVFTL--DEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMAD-PRAQNALGH 364 (384)
Q Consensus 288 sl~f~~--~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d-~~v~~al~~ 364 (384)
.+++++ +|+||-+.++-+.++++|+|+..+......+ .+.+.+.+++...+ +++++.|+.
T Consensus 5 ~~vitv~G~DrpGiva~vt~~l~~~g~NI~d~~~~~~~~-----------------~~~~~~~v~~~~~~~~~l~~~L~~ 67 (86)
T d1u8sa1 5 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGK-----------------EFTLLMLISGSPSNITRVETTLPL 67 (86)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETT-----------------EEEEEEEEEECHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCChHHHHHHHHHHHCCCeEEEeEeEEECC-----------------eeEEEEEEEcCcccHHHHHHHHHH
Confidence 344444 8999999999999999999998766655432 35555555543222 466677777
Q ss_pred HHHh
Q 016702 365 LQEF 368 (384)
Q Consensus 365 L~~~ 368 (384)
|.+.
T Consensus 68 l~~~ 71 (86)
T d1u8sa1 68 LGQQ 71 (86)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 20
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=94.00 E-value=0.14 Score=38.53 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=31.0
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeee
Q 016702 287 TSIVFTLDEGPGVLFKALAVFALREINLTKIESRP 321 (384)
Q Consensus 287 tsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP 321 (384)
..+.+.-+|+||-+.++-+.|+.+|+|+..+.++-
T Consensus 7 v~v~v~g~DrpGIV~~it~~la~~~~nI~~l~t~~ 41 (93)
T d1u8sa2 7 VEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQT 41 (93)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCchhhhccc
Confidence 45667789999999999999999999999998864
No 21
>d1wdna_ c.94.1.1 (A:) Glutamine-binding protein {Escherichia coli [TaxId: 562]}
Probab=89.46 E-value=1.6 Score=35.90 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=66.8
Q ss_pred ceEEEEECCCCcHHHHHHHHHCCCCcccCCCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCeEEEEEEEE
Q 016702 97 KVRISFKGLPGSFSEDAALKAYPKCETVPCDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRLHIVGEVQL 176 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~AA~~~f~~~~~~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l~I~gEi~l 176 (384)
..+|++. .|+..+....+.++..++....+.++.+.+|..|++|+.+..-. .+...+......++.+.++..-
T Consensus 106 ~~~v~v~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~vD~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 178 (223)
T d1wdna_ 106 GKVVAVK--SGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTP-----NILYFIKTAGNGQFKAVGDSLE 178 (223)
T ss_dssp TCEEEEE--TTSHHHHHHHHHCCCSEEEEESSHHHHHHHHHTTSCSEEEEEHH-----HHHHHHHTTTTTTEEEEEEEEE
T ss_pred CCEEEEE--eecchhhhhhhhccccceeeeCCHHHHHHHHhcCCccccccccH-----HhhhhhhhcCCCcceecCCCCC
Confidence 4688885 58887777777888888999999999999999999999887532 1111111222346778877666
Q ss_pred eeeeeeecCCCCCcCCccEEEecHHHHHHHHHHHHh
Q 016702 177 AANFCLLALPGIKADQLKRVLSHPQALASSDIVLTQ 212 (384)
Q Consensus 177 ~I~h~Ll~~~g~~l~~I~~VySHpqAl~QC~~fL~~ 212 (384)
+...+++.+++ +|+-..+-.++|.+
T Consensus 179 ~~~~~~~~~k~-----------~~~l~~~in~~i~~ 203 (223)
T d1wdna_ 179 AQQYGIAFPKG-----------SDELRDKVNGALKT 203 (223)
T ss_dssp EEEEEEEECTT-----------CHHHHHHHHHHHHH
T ss_pred cceEEEEEECC-----------CHHHHHHHHHHHHH
Confidence 66666665543 45445555666654
No 22
>d1xt8a1 c.94.1.1 (A:10-257) Putative amino-acid transporter CjaA {Campylobacter jejuni [TaxId: 197]}
Probab=88.73 E-value=0.28 Score=42.42 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=42.6
Q ss_pred ceEEEEECCCCcHHHHHHHHHCCCCcccCCCCHHHHHHHHHhCCCCeEEEe
Q 016702 97 KVRISFKGLPGSFSEDAALKAYPKCETVPCDEFEDTFKAVELWLADKAVLP 147 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~AA~~~f~~~~~~~~~s~~~Vf~aV~~g~~d~gVvP 147 (384)
..+|+++ .||+.++.+.+.+++.++++++|.++.+++|.+|++|+.+.+
T Consensus 120 g~~i~v~--~gs~~~~~l~~~~~~~~i~~~~s~~~~~~~l~~g~vD~~i~~ 168 (248)
T d1xt8a1 120 DKTLLLN--KGTTADAYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHD 168 (248)
T ss_dssp TSEEEEE--TTSHHHHHHHHHCTTSEEEEESSHHHHHHHHHTTSSSEEEEE
T ss_pred cceeeec--CCChHHHhhhccccccccccccchhhHHHhhccccccccccc
Confidence 4688875 568888888888999999999999999999999999988764
No 23
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=81.94 E-value=1.4 Score=32.93 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=44.9
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHHH
Q 016702 287 TSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHLQ 366 (384)
Q Consensus 287 tsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L~ 366 (384)
..+.+++|.+||||.+.++.+..+ |+|-..=|-..... . .-||=++-.......+++++.|+
T Consensus 4 ~l~~v~iPErpGaf~~F~~~lg~~--nITeF~YR~~~~~~--------------a--~VlvGi~~~~~~~e~~~l~~~L~ 65 (88)
T d1tdja2 4 ALLAVTIPEEKGSFLKFCQLLGGR--SVTEFNYRFADAKN--------------A--CIFVGVRLSRGLEERKEILQMLN 65 (88)
T ss_dssp EEEEEECCBSSSCSHHHHHTTSSS--EEEEEEEECCCSSB--------------C--EEEEEEECSSTHHHHHHHHHHHT
T ss_pred EEEEEEcCCCccHHHHHHHhcCcC--ceEEEEEEccCCCC--------------e--EEEEEEEecCcchhHHHHHHHHH
Confidence 457789999999999999999754 88888888764421 1 33444443323356777888887
Q ss_pred Hhc
Q 016702 367 EFA 369 (384)
Q Consensus 367 ~~~ 369 (384)
+..
T Consensus 66 ~~G 68 (88)
T d1tdja2 66 DGG 68 (88)
T ss_dssp SSS
T ss_pred HCC
Confidence 654
No 24
>d1ii5a_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
Probab=77.92 E-value=12 Score=30.12 Aligned_cols=117 Identities=14% Similarity=0.061 Sum_probs=67.2
Q ss_pred CCcccCCCCHHHHHHHHHhCCCCeEEEeeecccccccccccccc-ccCCeEEEEEEEEeeeeeeecCCC-----CCcCCc
Q 016702 120 KCETVPCDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLL-LRHRLHIVGEVQLAANFCLLALPG-----IKADQL 193 (384)
Q Consensus 120 ~~~~~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL-~~~~l~I~gEi~l~I~h~Ll~~~g-----~~l~~I 193 (384)
+.+++.+.++.++++++++|++|..+-++--+-+ .+....+ ...++.. ...+++.+++ .+++++
T Consensus 45 ~~~~v~~~~~~~~~~~l~~G~~D~~~~~~~~t~~---r~~~~~~~fs~p~~~-------~~~~~~~~~~~~~~~~~~~dl 114 (226)
T d1ii5a_ 45 NSEYVRQNSISAGITAVAEGELDILIGPISVTPE---RAAIEGITFTQPYFS-------SGIGLLIPGTATPLFRSVGDL 114 (226)
T ss_dssp CEEEEECSCHHHHHHHHHTTSCSEEEEEEECCHH---HHTSTTEEECCCCEE-------EEEEEEEEGGGTTTCSSGGGG
T ss_pred CeEEEEcCCHHHHHHHHhcCCcccccccccchhh---hhhhhcccccccccc-------cCcceEEEecccccchhhhhh
Confidence 4677889999999999999999987644321111 0011111 1112222 2233332221 122222
Q ss_pred c--EEEecHHHHHHHHHHHHhcCCeEEecCCHHHHHHHHHhcCCCCeEEEcCHHHHHHc
Q 016702 194 K--RVLSHPQALASSDIVLTQLGVARENVDDTASAAQYVASNGLRDAGAVASARAAEIY 250 (384)
Q Consensus 194 ~--~VySHpqAl~QC~~fL~~~~~~~i~~~STA~AA~~v~~~~~~~~AAIas~~aA~~y 250 (384)
+ +|........ ..|+..++.+.+.+.|..++.+++..+ .-.++++....+..+
T Consensus 115 ~~~~i~~~~g~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~g--~~d~~~~~~~~~~~~ 169 (226)
T d1ii5a_ 115 KNKEVAVVRDTTA--VDWANFYQADVRETNNLTAAITLLQKK--QVEAVMFDRPALIYY 169 (226)
T ss_dssp TTCEEEEETTSHH--HHHHHHTTCEEEEESSHHHHHHHHHTT--SCSEEEEEHHHHHHH
T ss_pred hhhccccccCchh--hhccccccceeeccchHHHHHHHHhCC--CeeeEeccchhHHHH
Confidence 2 3333332222 357777788889999999999999886 345777777666554
No 25
>d2cdqa2 d.58.18.10 (A:329-419) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=74.22 E-value=4.3 Score=29.98 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=44.6
Q ss_pred eCCCcchHHHHHHHHHhCCceeeeeeeeeCCCCCCccccCCCCCCcccccEEEEEEeecC----CCcHHHHHHHHHHHHh
Q 016702 293 LDEGPGVLFKALAVFALREINLTKIESRPQRKRPLRVVDDSNNGTAKYFDYLFYIDFEAS----MADPRAQNALGHLQEF 368 (384)
Q Consensus 293 ~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~----~~d~~v~~al~~L~~~ 368 (384)
..++||.+.++.+.|+++|||+--|-+-. -...|.||-+-. .....+..++++|++.
T Consensus 23 m~~~~G~~a~if~~La~~~Inv~~Is~Se-------------------~~is~~v~~~~~~~a~~~~~~~~~~~~el~~i 83 (91)
T d2cdqa2 23 MLGQVGFLAKVFSIFEELGISVDVVATSE-------------------VSISLTLDPSKLWSRELIQQELDHVVEELEKI 83 (91)
T ss_dssp GTTCTTHHHHHHHHHHHTTCCEEEEEEET-------------------TEEEEEECCGGGSSSCCCHHHHHHHHHHHTTT
T ss_pred CCCCccHHHHHHHHHHHcCCcEEEEEecC-------------------CeEEEEEchhHHHHHHHHHHHHHHHHHHHhCC
Confidence 36899999999999999999999997532 247788864322 2235566777777654
Q ss_pred cCceEEE
Q 016702 369 ATFLRVL 375 (384)
Q Consensus 369 ~~~vkvL 375 (384)
+. |.+.
T Consensus 84 a~-VsVv 89 (91)
T d2cdqa2 84 AV-VNLL 89 (91)
T ss_dssp SE-EEEE
T ss_pred ce-EEEe
Confidence 43 5554
No 26
>d1ixca2 c.94.1.1 (A:90-294) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=73.87 E-value=16 Score=27.67 Aligned_cols=142 Identities=10% Similarity=0.014 Sum_probs=69.9
Q ss_pred ceEEEEECCCCcHHHH--HH---HHHCCCCccc-CCCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCeEE
Q 016702 97 KVRISFKGLPGSFSED--AA---LKAYPKCETV-PCDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRLHI 170 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~--AA---~~~f~~~~~~-~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l~I 170 (384)
.++||+.+.-+. +.. +. ++.++++++. -..+.+++++++.+|++|+++....-...+... ..+ ..-
T Consensus 3 ~lrIg~~~~~~~-~~Lp~~l~~f~~~~P~v~l~i~~~~~~~l~~~l~~g~~D~~~~~~~~~~~~~~~---~~~----~~~ 74 (205)
T d1ixca2 3 ELSVAYFGTPIY-RSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEI---VNI----AQE 74 (205)
T ss_dssp EEEEEECSGGGG-THHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEESCCCCCTTEEE---EEE----EEE
T ss_pred EEEEEEEhHHHH-HHHHHHHHHHHHHCCCcEEEEEECCCccchhhhhhhhccccccccccccchhee---eec----ccc
Confidence 467887755443 222 21 2345775443 245668999999999999999854322111111 000 111
Q ss_pred EEEEEEeeeeeeecCCCCCcCC---ccEE-EecH---HHHHHHHHHHHhcCC--e-EEecCCHHHHHHHHHhcCCCCeEE
Q 016702 171 VGEVQLAANFCLLALPGIKADQ---LKRV-LSHP---QALASSDIVLTQLGV--A-RENVDDTASAAQYVASNGLRDAGA 240 (384)
Q Consensus 171 ~gEi~l~I~h~Ll~~~g~~l~~---I~~V-ySHp---qAl~QC~~fL~~~~~--~-~i~~~STA~AA~~v~~~~~~~~AA 240 (384)
.-.+.....|.+...+.....+ ...+ +++. .-......++.+.+. . ...++|...+..+++.+ ...|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g---~gi~ 151 (205)
T d1ixca2 75 DLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAG---AASS 151 (205)
T ss_dssp EEEEEEEGGGGGGTCSEECGGGGTTCEEEECCCSSSSCHHHHHHHHHHHTTCCCEEEEECSSHHHHHHHHHTT---SCBE
T ss_pred cccccccccccccccccccccccccCcccccccccccchhhhhhhhhhhccccccccccccchhhhhhhcccc---ceEE
Confidence 1111122233333333222222 2233 3222 223455566666543 3 34567777776777664 3455
Q ss_pred EcCHHHHHH
Q 016702 241 VASARAAEI 249 (384)
Q Consensus 241 Ias~~aA~~ 249 (384)
+.+..+++.
T Consensus 152 ~lp~~~~~~ 160 (205)
T d1ixca2 152 IVPASVAAI 160 (205)
T ss_dssp EEEHHHHTS
T ss_pred EccHHHHhc
Confidence 666666543
No 27
>d1xs5a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Treponema pallidum [TaxId: 160]}
Probab=71.71 E-value=1.7 Score=37.01 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=54.3
Q ss_pred CceEEEEECCCCcHHHH--HHHHHCC----CCcccCCCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccc---cC
Q 016702 96 TKVRISFKGLPGSFSED--AALKAYP----KCETVPCDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLL---RH 166 (384)
Q Consensus 96 ~~~~Va~LGP~GTfS~~--AA~~~f~----~~~~~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~---~~ 166 (384)
...||||++ ++.++. .+.++|. +++++.+.+..+..+++.+|++|.+.+-.-. .+..+. ..
T Consensus 3 ~ti~ig~~~--~~~~~~l~~~k~~~k~~Gi~Ve~v~f~~g~~~~~Al~~G~iD~~~~~~~~--------~l~~~~~~~~~ 72 (240)
T d1xs5a_ 3 ETVGVGVLS--EPHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVP--------HMQQFNQEHNG 72 (240)
T ss_dssp EEEEEEECS--TTHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTSSSEEEEEEHH--------HHHHHHHHHTC
T ss_pred ceEEEEecC--CCcHHHHHHHHHHHHHcCCEEEEEEeCChhhHHHHHHcCCcceeccCCHH--------HHHHHHHhCCC
Confidence 467999995 556653 2455664 2688999999999999999999998763221 111111 23
Q ss_pred CeEEEEEEEEeeeeeeecCCCCCcCCc
Q 016702 167 RLHIVGEVQLAANFCLLALPGIKADQL 193 (384)
Q Consensus 167 ~l~I~gEi~l~I~h~Ll~~~g~~l~~I 193 (384)
++.+++..... ...|.++++.++.+.
T Consensus 73 ~i~~v~~~~~~-~~~l~~~~~~s~~d~ 98 (240)
T d1xs5a_ 73 DLVSVGNVHVE-PLALYSRTYRHVSDF 98 (240)
T ss_dssp CEEEEEEEEEC-CCEEECSSCCSGGGC
T ss_pred cEEEeeccccC-ceEEEecCCCChhhc
Confidence 55555554432 245666665555443
No 28
>d1tdja3 d.58.18.2 (A:424-514) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=63.63 E-value=2.2 Score=31.99 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=27.9
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeCCC
Q 016702 287 TSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQRK 324 (384)
Q Consensus 287 tsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~~~ 324 (384)
..+.|++|.+||||.+.|+.+.. +.|+|..+=|-...
T Consensus 11 ~l~~v~iPErpGal~~Fl~~l~~-~~nITeF~YR~~~~ 47 (91)
T d1tdja3 11 RLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGT 47 (91)
T ss_dssp EEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTT
T ss_pred EEEEEECCCCccHHHHHHHHhCC-CCcEEEEEEeecCC
Confidence 45788999999999999999743 34566666676543
No 29
>d1ve4a1 c.94.1.1 (A:1-206) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=63.36 E-value=13 Score=31.37 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=85.2
Q ss_pred CceEEEEECCCCcHHHHHHHHHCC-------CC---cc----------cCCCCHHHHHHHHHhCCCCeEEEeeecccccc
Q 016702 96 TKVRISFKGLPGSFSEDAALKAYP-------KC---ET----------VPCDEFEDTFKAVELWLADKAVLPIENSSSGS 155 (384)
Q Consensus 96 ~~~~Va~LGP~GTfS~~AA~~~f~-------~~---~~----------~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~ 155 (384)
...+||. |+|.-.+++.. +|. +. .+ +-+--..|+-..|+.|.+|.||+=
T Consensus 4 ~~l~iAl--PKGRL~~~~~~-ll~~~Gi~~~~~~~rr~~~~~~~~~i~~~~vR~~DIp~~V~~G~~DlGItG-------- 72 (206)
T d1ve4a1 4 FALTVAL--PKGRMFREAYE-VLKRAGLDLPEVEGERTLLHGKEGGVALLELRNKDVPIYVDLGIAEIGVVG-------- 72 (206)
T ss_dssp SSEEEEE--ECSTTHHHHHH-HHHHTTCCCCCC-----CEECCTTSEEEEEECGGGHHHHHHTTSSSEEEEE--------
T ss_pred ccEEEEe--cccccHHHHHH-HHHHCCCCCccCCCceeEeccCCCCEEEEEechHHHHHHHhhhhcceeeec--------
Confidence 3567887 68887777654 331 10 00 011223688999999999999974
Q ss_pred ccccccccccCCeEEEEEEEEeeeeeee--cCCCCCcCCccEEEecHHHHHHHHHHHHhcCC--eEEecCCHHHHHHHHH
Q 016702 156 IHRNYDLLLRHRLHIVGEVQLAANFCLL--ALPGIKADQLKRVLSHPQALASSDIVLTQLGV--ARENVDDTASAAQYVA 231 (384)
Q Consensus 156 V~~tlDlL~~~~l~I~gEi~l~I~h~Ll--~~~g~~l~~I~~VySHpqAl~QC~~fL~~~~~--~~i~~~STA~AA~~v~ 231 (384)
.|.|.+++-.+.--..|...+|=+ +.+..+..+.++|.|...-+ .++|+.++++ +.+...-..|.|-..
T Consensus 73 ----~D~l~E~~~~v~~l~dL~fG~crl~va~~~~~~~~~~rIATkYpni--t~~~~~~~gi~~~ii~~~Gs~E~ap~~- 145 (206)
T d1ve4a1 73 ----KDVLLDSGRDLFEPVDLGFGACRLSLIRRPGDTGPIRRVATKYPNF--TARLLKERGWAADVVELSGNIELAAVT- 145 (206)
T ss_dssp ----HHHHHHCCSCCEEEEECCCSCEEEEEEECTTCCSCCCEEEESCHHH--HHHHHHHTTCCCEEEECSSCTHHHHHT-
T ss_pred ----ceeeEecCCCccCccceEEECeEEEEEEEeeccCCccEeeHHHHHH--HHHHHHhcCCcceEEEEEcccccccCC-
Confidence 355555544444455677777722 33334567778899877665 4899999864 455554333333321
Q ss_pred hcCCCC-eEE-EcCHHHHHHcCCceeec
Q 016702 232 SNGLRD-AGA-VASARAAEIYGLNILAD 257 (384)
Q Consensus 232 ~~~~~~-~AA-Ias~~aA~~ygL~il~~ 257 (384)
+..+ ..= ..+-..-+.+||+++..
T Consensus 146 --g~AD~IvDiv~TG~TLk~N~L~~i~~ 171 (206)
T d1ve4a1 146 --GLADAVVDVVQTGATLRAAGLVEVEV 171 (206)
T ss_dssp --TSSSEEEEEESSSHHHHHTTCEEEEE
T ss_pred --CccceeEEeecCHHHHHHCCCEeeeE
Confidence 1111 122 25566678899998863
No 30
>d2ozza1 c.94.1.1 (A:1-228) Hypothetical protein YhfZ {Shigella flexneri [TaxId: 623]}
Probab=59.75 E-value=6.8 Score=32.94 Aligned_cols=48 Identities=10% Similarity=0.151 Sum_probs=37.5
Q ss_pred ceEEEEECCCCcHHHHHHHHHC-C--CCcccCCCCHHHHHHHHHhCCCCeEEEe
Q 016702 97 KVRISFKGLPGSFSEDAALKAY-P--KCETVPCDEFEDTFKAVELWLADKAVLP 147 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~AA~~~f-~--~~~~~~~~s~~~Vf~aV~~g~~d~gVvP 147 (384)
..|||+ +.||.+|.+..+.. . +++++.++ +.+.+.++.+|++|.+|.+
T Consensus 109 Gk~vgv--~~~s~~~~~l~~~~~~~~~v~~v~~~-~~~~~~al~~G~vDa~v~~ 159 (228)
T d2ozza1 109 VKRVGL--DSRSADQKIMTDVFFGDSDVERVDLS-YHESLQRIVKGDVDAVIWN 159 (228)
T ss_dssp CCEEEE--CTTCHHHHHHHHHHHTTSCCEEEECC-HHHHHHHHHHTSCCEEEEE
T ss_pred CCEEEe--cCCChHHHHHHHcCCCccceEEEeCC-HHHHHHHHHcCceeEEEeC
Confidence 469998 78999997766542 2 36777774 8899999999999988764
No 31
>d1al3a_ c.94.1.1 (A:) Cofactor-binding fragment of LysR-type protein CysB {Klebsiella aerogenes [TaxId: 28451]}
Probab=56.49 E-value=39 Score=27.29 Aligned_cols=121 Identities=14% Similarity=0.054 Sum_probs=65.7
Q ss_pred HCCCCccc-CCCCHHHHHHHHHhCCCCeEEEeeecccc-ccccccccccccCCeEEEEEEEEeeeeeeecCCCCCcCCcc
Q 016702 117 AYPKCETV-PCDEFEDTFKAVELWLADKAVLPIENSSS-GSIHRNYDLLLRHRLHIVGEVQLAANFCLLALPGIKADQLK 194 (384)
Q Consensus 117 ~f~~~~~~-~~~s~~~Vf~aV~~g~~d~gVvPiENS~~-G~V~~tlDlL~~~~l~I~gEi~l~I~h~Ll~~~g~~l~~I~ 194 (384)
.|+++++. ...+.+++.+.|.+|++|+|+.-...... +.... -+.+..+. +..+-.|.|......+++|+.
T Consensus 31 ~~P~v~v~l~~~~~~~l~~~l~~g~~D~ai~~~~~~~~~~l~~~---~l~~~~~~----~v~~~~h~la~~~~~~~~dL~ 103 (237)
T d1al3a_ 31 RYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVML---PCYHWNRS----IVVTPEHPLATKGSVSIEELA 103 (237)
T ss_dssp HCTEEEEEEEECCHHHHHHHHHTTCCSEEEESSCCCTTSCEEEE---EEEEECEE----EEECTTSTTTTTSCCCHHHHH
T ss_pred HCCCcEEEEEECCHHHHHHHHhccCCcEEEEeeccccccccccc---ccccceEE----EEEecCccccccccccchhhc
Confidence 35665543 35677899999999999999984322211 11110 01111111 234455666554444444443
Q ss_pred ---EEEecH--HHHHHHHHHHHhcCCe---EEecCCHHHHHHHHHhcCCCCeEEEcCHHHH
Q 016702 195 ---RVLSHP--QALASSDIVLTQLGVA---RENVDDTASAAQYVASNGLRDAGAVASARAA 247 (384)
Q Consensus 195 ---~VySHp--qAl~QC~~fL~~~~~~---~i~~~STA~AA~~v~~~~~~~~AAIas~~aA 247 (384)
-|.--+ ....++..|+...+.. ...++|...+.+++..+ ...+|.+..++
T Consensus 104 ~~p~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~~~~~~v~~g---~Gi~~~p~~~v 161 (237)
T d1al3a_ 104 QYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLG---LGVGVIASMAV 161 (237)
T ss_dssp TSEEEEECTTSTTHHHHHHHHHHHTCCCEEEEEESSHHHHHHHHHHT---SCEEEEEGGGC
T ss_pred cCCcccccccchHHHHHHHHHHHcCCCCcceeecCCHHHHHHHhcCC---CEEEechHHhh
Confidence 333222 2347788888877543 35566777777777664 33455555433
No 32
>d1ii5a_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
Probab=50.04 E-value=8.9 Score=31.06 Aligned_cols=47 Identities=4% Similarity=0.080 Sum_probs=36.5
Q ss_pred ceEEEEECCCCcHHHHHHHHHCCCCcccCCCCHHHHHHHHHhCCCCeEEEe
Q 016702 97 KVRISFKGLPGSFSEDAALKAYPKCETVPCDEFEDTFKAVELWLADKAVLP 147 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~AA~~~f~~~~~~~~~s~~~Vf~aV~~g~~d~gVvP 147 (384)
..+|++. .|+..+.... +...+++++.+.++++++|.+|++|+.+..
T Consensus 116 ~~~i~~~--~g~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~g~~d~~~~~ 162 (226)
T d1ii5a_ 116 NKEVAVV--RDTTAVDWAN--FYQADVRETNNLTAAITLLQKKQVEAVMFD 162 (226)
T ss_dssp TCEEEEE--TTSHHHHHHH--HTTCEEEEESSHHHHHHHHHTTSCSEEEEE
T ss_pred hhccccc--cCchhhhccc--cccceeeccchHHHHHHHHhCCCeeeEecc
Confidence 4588875 5666665544 345678899999999999999999988864
No 33
>d1p99a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Staphylococcus aureus [TaxId: 1280]}
Probab=49.66 E-value=4 Score=34.66 Aligned_cols=50 Identities=12% Similarity=-0.036 Sum_probs=39.3
Q ss_pred eEEEEECCCCcHHHHHHHHHCC----CCcccCCCCHHHHHHHHHhCCCCeEEEee
Q 016702 98 VRISFKGLPGSFSEDAALKAYP----KCETVPCDEFEDTFKAVELWLADKAVLPI 148 (384)
Q Consensus 98 ~~Va~LGP~GTfS~~AA~~~f~----~~~~~~~~s~~~Vf~aV~~g~~d~gVvPi 148 (384)
.+||+.|+.+-- ++.+.+.|. +++++.+.+..+..+|+.+|++|.+..-.
T Consensus 2 v~ig~~~~~~~~-~~~~~~~~~k~Gl~Ve~~~f~~~~~~~~Al~~G~iD~~~~~~ 55 (255)
T d1p99a_ 2 VTIGVASNDTKA-WEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQH 55 (255)
T ss_dssp EEEEESSSCCHH-HHHHHHHHGGGTCCEEEEECSSTTSHHHHHHTTSSSEEEEEE
T ss_pred EEEEEcCCcHHH-HHHHHHHHHHcCCEEEEEEcCCchhHHHHHHcCCCCEEccCC
Confidence 689999876544 444455664 37899999999999999999999987643
No 34
>d1us5a_ c.94.1.1 (A:) Putative GluR0 ligand binding core {Thermus thermophilus [TaxId: 274]}
Probab=48.86 E-value=11 Score=32.85 Aligned_cols=50 Identities=16% Similarity=-0.009 Sum_probs=38.7
Q ss_pred ceEEEEECCCCcHHHHHHHHHC---CC----CcccCCCCHHHHHHHHHhCCCCeEEEe
Q 016702 97 KVRISFKGLPGSFSEDAALKAY---PK----CETVPCDEFEDTFKAVELWLADKAVLP 147 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~AA~~~f---~~----~~~~~~~s~~~Vf~aV~~g~~d~gVvP 147 (384)
..+|+ +||.|+-++..++..| +- ...+...+..+.++++.+|++|..+..
T Consensus 115 gk~v~-~g~~gsg~~~~~~~~l~~~g~~~dd~~~~~~~~~~~~~~al~~g~iDa~~~~ 171 (298)
T d1us5a_ 115 GKRVV-VGDVGSGTEQNARQILEAYGLTFDDLGQAIRVSASQGIQLMQDKRADALFYT 171 (298)
T ss_dssp TSEEE-CCCTTCHHHHHHHHHHHHTTCCGGGSSEEECCCHHHHHHHHHTTSCSEEEEE
T ss_pred Ccccc-ccCCCchHHHHHHHHHHHhCCCcccccceeccchhHHHHHhcCCceeEEEEe
Confidence 45676 5999999998877655 31 234667899999999999999987764
No 35
>d2hmfa3 d.58.18.10 (A:304-403) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=46.86 E-value=12 Score=27.88 Aligned_cols=30 Identities=13% Similarity=0.186 Sum_probs=26.0
Q ss_pred eCCCcchHHHHHHHHHhCCceeeeeeeeeC
Q 016702 293 LDEGPGVLFKALAVFALREINLTKIESRPQ 322 (384)
Q Consensus 293 ~~~~pGaL~~~L~~F~~~~INLtkIESRP~ 322 (384)
.+++||.+.++++.|+++|||+--|-.-++
T Consensus 25 m~~~~Gi~arif~~La~~~InV~mIsQ~~S 54 (100)
T d2hmfa3 25 MVGVSGTAARIFKALGEEEVNVILISQGSS 54 (100)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred CCCCcchHHHHHHHHHHcCCCHHHeeccCC
Confidence 478999999999999999999999875443
No 36
>d2cdqa3 d.58.18.10 (A:420-494) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=42.34 E-value=22 Score=24.99 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=29.9
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceeeeeeeeeC
Q 016702 286 KTSIVFTLDEGPGVLFKALAVFALREINLTKIESRPQ 322 (384)
Q Consensus 286 Ktsl~f~~~~~pGaL~~~L~~F~~~~INLtkIESRP~ 322 (384)
+.|++=...+.||-+.++++.+++.|||+.-|-.=++
T Consensus 3 ~IsvVG~~~~~~Giaarif~aL~~~~InV~mIsqg~s 39 (75)
T d2cdqa3 3 IISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGAS 39 (75)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTT
T ss_pred EEEEECCCCCChhHHHHHHHHHHHcCCceEEEEcCcc
Confidence 4456655678899999999999999999998875443
No 37
>d2esna2 c.94.1.1 (A:92-303) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=41.59 E-value=3.3 Score=32.89 Aligned_cols=127 Identities=16% Similarity=0.001 Sum_probs=60.1
Q ss_pred HHCCCCcccC-CCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCeEEEEEEEEeeeeeeecCCCCCc---C
Q 016702 116 KAYPKCETVP-CDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRLHIVGEVQLAANFCLLALPGIKA---D 191 (384)
Q Consensus 116 ~~f~~~~~~~-~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l~I~gEi~l~I~h~Ll~~~g~~l---~ 191 (384)
+.++++++.- ..+.+++.+.+++|++|+||.+.............-.+....+ .+..+-+|-+... ...+ .
T Consensus 32 ~~~P~v~i~l~~~~~~~~~~~l~~g~~Dl~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~l~ 106 (212)
T d2esna2 32 HSAPGVRLRLVNAERKLSVEALASGRIDFALGYDEEHERLPEGIQAHDWFADRY----VVVARRDHPRLAG-APTLEGYL 106 (212)
T ss_dssp HHSTTCEEEEECCSSSCCHHHHHHTSSSEEEECCSTTCCCCTTEEEEEEEEECE----EEEEESSCTTCSS-SCCHHHHH
T ss_pred HHCCCcEEEEEecCcHHHHHHHHHhccccccccccccccccccccccccchhhh----cccccccchhhcc-ccCHHHHh
Confidence 3467766543 3345668999999999999986543322211110000000000 0111111222221 1222 2
Q ss_pred CccEEEecH--HHHHHHHHHHHhcCC--e-EEecCCHHHHHHHHHhcCCCCeEEEcCHHHHHHc
Q 016702 192 QLKRVLSHP--QALASSDIVLTQLGV--A-RENVDDTASAAQYVASNGLRDAGAVASARAAEIY 250 (384)
Q Consensus 192 ~I~~VySHp--qAl~QC~~fL~~~~~--~-~i~~~STA~AA~~v~~~~~~~~AAIas~~aA~~y 250 (384)
+..-|.-.+ .......+++...+. . ...++|-..+..+++.+ ...+|.++..+..+
T Consensus 107 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g---~gi~ilp~~~~~~~ 167 (212)
T d2esna2 107 AERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGST---DFLLTAPRHAARAL 167 (212)
T ss_dssp TSEEEEECTTCCSSCHHHHHHHHTTCCCEEEEEESCHHHHHHHHHTS---SCEEEEEHHHHHHH
T ss_pred cCccccccCCCCcchhHHHHHHHhCcccccccccccHHHHHHHHhcC---CEEEEcchhhHhhh
Confidence 222333222 122444556666543 2 34566666666677764 45677777666544
No 38
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=41.56 E-value=30 Score=23.59 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=25.4
Q ss_pred eCCCcchHHHHHHHHHhCCceeeeeeeee
Q 016702 293 LDEGPGVLFKALAVFALREINLTKIESRP 321 (384)
Q Consensus 293 ~~~~pGaL~~~L~~F~~~~INLtkIESRP 321 (384)
+.++||...++++.+++.|||+.-|-.=+
T Consensus 11 m~~~~gi~arif~~L~~~~InV~mIsq~~ 39 (67)
T d2hmfa2 11 MRGAKGIAGKIFTAVSESGANIKMIAQGS 39 (67)
T ss_dssp TTTCTTHHHHHHHHHHHTTCCCCEEEESS
T ss_pred CCCCccHHHHHHHHHHHcCCChHHeeecC
Confidence 46899999999999999999999887443
No 39
>d1o63a_ c.94.1.1 (A:) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=37.19 E-value=17 Score=30.63 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=66.7
Q ss_pred CHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCeEEEEEEEEeeeee---eecCCCCCc-CCccEEEecHHHH
Q 016702 128 EFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRLHIVGEVQLAANFC---LLALPGIKA-DQLKRVLSHPQAL 203 (384)
Q Consensus 128 s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l~I~gEi~l~I~h~---Ll~~~g~~l-~~I~~VySHpqAl 203 (384)
...|+-..|+.|.+|+||+=. |++.+.+-.+.--..|+..+| +++..+... +.-++|.+...-+
T Consensus 44 r~~DIp~~V~~G~~DlGI~G~------------D~l~E~~~~v~~~~~L~~g~~~l~vA~p~~~~~~~~~~rIATkYpnl 111 (203)
T d1o63a_ 44 RPFDVPTYLVHGVADIGFCGT------------DVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNV 111 (203)
T ss_dssp CGGGHHHHHHTTSCSEEEEEH------------HHHHHSCCCCBCCSEEEEEEEEEEEEEETTTCCCSSCEEEEESCHHH
T ss_pred cchhhhHHHHhcccccccchH------------HHHhhhcccceeeeecceeeeEEEEecccccccccccceeeechhhH
Confidence 467899999999999999742 333332222222223455555 333333222 1224788887777
Q ss_pred HHHHHHHHhcCC--eEEecCCHHHHHHHHHhcCCCCeEE-EcCHHHHHHcCCceeeccc
Q 016702 204 ASSDIVLTQLGV--ARENVDDTASAAQYVASNGLRDAGA-VASARAAEIYGLNILADRI 259 (384)
Q Consensus 204 ~QC~~fL~~~~~--~~i~~~STA~AA~~v~~~~~~~~AA-Ias~~aA~~ygL~il~~~I 259 (384)
. ++||.++++ +.+..+-..|.|-..--. .-.+= ..|-...+.+||+++..-+
T Consensus 112 t--~~f~~~~gi~~~ii~l~GavE~Ap~~G~A--D~IvDivsTG~TLk~NgLk~i~~i~ 166 (203)
T d1o63a_ 112 T--QRYCESKGWHCRIIPLKGSVELAPIAGLS--DLIVDITETGRTLKENNLEILDEIF 166 (203)
T ss_dssp H--HHHHHHHTCCEEEEECSSCTTHHHHHTSC--SEEEEEESSSHHHHHTTEEEEEEEE
T ss_pred H--HHHHHHccCceEEEeccCCCCCCcccccc--ceeeeeccchHHHHHCCCEEcccee
Confidence 6 489998864 556665455544332111 11122 2556667899999987543
No 40
>d1z7me1 c.94.1.1 (E:1-204) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Lactococcus lactis [TaxId: 1358]}
Probab=35.16 E-value=49 Score=27.55 Aligned_cols=142 Identities=14% Similarity=0.174 Sum_probs=82.0
Q ss_pred eEEEEECCCCcHHHHHHHHHC--C-------C--Ccc---------cCCCCHHHHHHHHHhCCCCeEEEeeecccccccc
Q 016702 98 VRISFKGLPGSFSEDAALKAY--P-------K--CET---------VPCDEFEDTFKAVELWLADKAVLPIENSSSGSIH 157 (384)
Q Consensus 98 ~~Va~LGP~GTfS~~AA~~~f--~-------~--~~~---------~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~ 157 (384)
++||. |+|.-.+.+..-+- | + -.+ +-+-...|+-..|+.|.+|+||+=
T Consensus 2 l~iAl--pKGrL~~~~~~lL~~~G~~~~~~~~~~r~l~~~~~~~i~v~~~r~~DIp~~V~~G~~DlGItG---------- 69 (204)
T d1z7me1 2 IKIAI--TKGRIQKQVTKLLENADYDVEPILNLGRELQIKTKDDLQIIFGKPNDVITFLEHGIVDIGFVG---------- 69 (204)
T ss_dssp CCEEE--ETTHHHHHHHHHHHTTTCCCCCC----CCSEECCTTSCCEEEECHHHHHHHHHTTSCSEEEEE----------
T ss_pred eEEEe--cCcccHHHHHHHHHHCCCCcccCCCCCcEEeeCCCCCeEEEEEchHHHHHHHHhcccccccch----------
Confidence 57786 78988887765321 1 0 000 112245799999999999999984
Q ss_pred ccccccccCCeE-EEEEEEEeeeeeeecC---CC---CCcCCccEEEecHHHHHHHHHHHHhcCC--eEEecCCHHHHHH
Q 016702 158 RNYDLLLRHRLH-IVGEVQLAANFCLLAL---PG---IKADQLKRVLSHPQALASSDIVLTQLGV--ARENVDDTASAAQ 228 (384)
Q Consensus 158 ~tlDlL~~~~l~-I~gEi~l~I~h~Ll~~---~g---~~l~~I~~VySHpqAl~QC~~fL~~~~~--~~i~~~STA~AA~ 228 (384)
+|++.+++.. +.--..+.+-+|-++. +. .+...-++|.+...-+. ++||.++++ +.+..+-..|+|-
T Consensus 70 --~D~l~E~~~~~~~~l~~L~~G~c~l~vA~~~~~~~~~~~~~~RIATkYp~lt--~~f~~~~gi~~~ii~l~GavE~aP 145 (204)
T d1z7me1 70 --KDTLDENDFDDYYELLYLKIGQCIFALASYPDFSNKNFQRHKRIASKYPRVT--KKYFAQKQEDIEIIKLEGSVELGP 145 (204)
T ss_dssp --HHHHHHSSCCCEEEEEEETTCCCEEEEEECGGGGGCCCSSCEEEEESCHHHH--HHHHHHTTCCEEEEECSSCTTHHH
T ss_pred --HHHHhcCCCccEEEEecccCCcEEEEECcchhccchhcccccEehHHHHHHH--HHHHHHhCcceEEEEecccccCcc
Confidence 2445443321 3344456666664422 11 12233457777766554 789999864 5566655555554
Q ss_pred HHHhcCCCCeEEE-cCHHHHHHcCCceeec
Q 016702 229 YVASNGLRDAGAV-ASARAAEIYGLNILAD 257 (384)
Q Consensus 229 ~v~~~~~~~~AAI-as~~aA~~ygL~il~~ 257 (384)
..--. .-.+=| .+-...+.+||+++..
T Consensus 146 ~~G~A--D~IvDivsTG~TLkaN~Lk~i~~ 173 (204)
T d1z7me1 146 VVGLA--DAIVDIVETGNTLSANGLEVIEK 173 (204)
T ss_dssp HTTSC--SEEEEEESSSHHHHTTTCEEEEE
T ss_pred Ccccc--cEEEEEeCCHHHHHHCCCEEcee
Confidence 32110 012222 5566678999999864
No 41
>d1nh8a1 c.94.1.1 (A:1-210) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.78 E-value=37 Score=28.54 Aligned_cols=115 Identities=15% Similarity=0.060 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCeEEEEEEEEeeeeee---ecCCCC--C---cCCccEEEecH
Q 016702 129 FEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRLHIVGEVQLAANFCL---LALPGI--K---ADQLKRVLSHP 200 (384)
Q Consensus 129 ~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l~I~gEi~l~I~h~L---l~~~g~--~---l~~I~~VySHp 200 (384)
..|+-..|+.|.+|.||+= +|+|.++.-.|.--..|+..+|= ++.++. + +.. .+|.+..
T Consensus 50 ~~DIp~~V~~G~~DlGI~G------------~D~l~E~~~~v~~~~dL~fG~c~l~vA~p~~~~~~~~~l~~-~rIATkY 116 (210)
T d1nh8a1 50 PKDIAIYVGSGELDFGITG------------RDLVCDSGAQVRERLALGFGSSSFRYAAPAGRNWTTADLAG-MRIATAY 116 (210)
T ss_dssp GGGHHHHHHHSSCSEEEEE------------HHHHHHHTCCEEEEEECSCCCEEEEEEEETTSCCCGGGGTT-CEEEESC
T ss_pred HHHHHHHHHhccCceeeec------------HHHHhhcccchhhhhcccccceEEEEEeecCCCCChhhhcC-CEEeeeh
Confidence 4788999999999999973 34444433334444555555552 233321 1 222 3566666
Q ss_pred HHHHHHHHHHHhcC--CeEEecCCHHHHHHHHHhcCCCCeEE-EcCHHHHHHcCCceeecccc
Q 016702 201 QALASSDIVLTQLG--VARENVDDTASAAQYVASNGLRDAGA-VASARAAEIYGLNILADRIQ 260 (384)
Q Consensus 201 qAl~QC~~fL~~~~--~~~i~~~STA~AA~~v~~~~~~~~AA-Ias~~aA~~ygL~il~~~I~ 260 (384)
.-+. ++|+.+.+ ++.+...-..|+|-.+--. .-..= ..+-...+.+||+++.+-+.
T Consensus 117 pnit--~~ff~~~gi~~~ii~~~Ga~E~ap~~g~A--D~IvDiv~TG~TLk~N~L~~i~~~l~ 175 (210)
T d1nh8a1 117 PNLV--RKDLATKGIEATVIRLDGAVEISVQLGVA--DAIADVVGSGRTLSQHDLVAFGEPLC 175 (210)
T ss_dssp HHHH--HHHHHHHTCCCEEEECSSCCTHHHHTTSC--SEEEEEESSSHHHHHTTEEEEEEEEE
T ss_pred HHHH--HHHHHHcCCceeEEEEecCccccccCCcc--eEEEeeeccHHHHHHCCCEEcchhhh
Confidence 5554 77999875 5666666555554322110 01111 25666788999999976443
No 42
>d1qnta2 c.55.7.1 (A:6-91) O6-alkylguanine-DNA alkyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.02 E-value=5.2 Score=29.58 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=16.1
Q ss_pred EEEecHHHHHHHHHHHHhc
Q 016702 195 RVLSHPQALASSDIVLTQL 213 (384)
Q Consensus 195 ~VySHpqAl~QC~~fL~~~ 213 (384)
++.+-|..|.||-+||+.+
T Consensus 46 ~~~~~~epL~qC~~WL~aY 64 (86)
T d1qnta2 46 AVLGGPEPLMQCTAWLNAY 64 (86)
T ss_dssp SSCCCSHHHHHHHHHHHHH
T ss_pred HHhcCchhHHHHHHHHHHH
Confidence 4567789999999999985
No 43
>d1h3da1 c.94.1.1 (A:5-224) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Escherichia coli [TaxId: 562]}
Probab=32.89 E-value=31 Score=29.26 Aligned_cols=112 Identities=20% Similarity=0.142 Sum_probs=64.2
Q ss_pred CHHHHHHHHHhCCCCeEEEeeeccccccccccccccccC---------CeEEEEEEEEeeeee---eecCCCCCcCCc--
Q 016702 128 EFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRH---------RLHIVGEVQLAANFC---LLALPGIKADQL-- 193 (384)
Q Consensus 128 s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~---------~l~I~gEi~l~I~h~---Ll~~~g~~l~~I-- 193 (384)
...|+-..|+.|.+|+||+= +|+|.++ +-.+.--..|..-+| +++..+...++.
T Consensus 50 r~~DIp~~V~~G~~DlGItG------------~D~l~E~~~~~~~~~~~~~v~~l~dL~fG~crLvvA~p~~~~~~~~~~ 117 (220)
T d1h3da1 50 RDDDIPGLVMDGVVDLGIIG------------ENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLS 117 (220)
T ss_dssp CGGGHHHHHHTTSSSEEEEE------------HHHHHHHHHHHHHHTCCCCEEEEEECSCCCEEEEEEEETTSCCCCGGG
T ss_pred ChHHHHHHHHhccCcccchh------------HHHHHhhcccchhccCCcceEEEEecccCceeEEEeccccccccChhH
Confidence 44689999999999999974 2333331 112333345555555 223322222222
Q ss_pred ---cEEEecHHHHHHHHHHHHhcCC--eEEecCCHHHHHHHHHhcCCCC-eEE-EcCHHHHHHcCCceee
Q 016702 194 ---KRVLSHPQALASSDIVLTQLGV--ARENVDDTASAAQYVASNGLRD-AGA-VASARAAEIYGLNILA 256 (384)
Q Consensus 194 ---~~VySHpqAl~QC~~fL~~~~~--~~i~~~STA~AA~~v~~~~~~~-~AA-Ias~~aA~~ygL~il~ 256 (384)
++|.+...-+. ++|+.++++ +.+..+-..|.|-.+ +..+ .+= ..+-...+.+||+++.
T Consensus 118 ~~~~RIATkYp~it--~~y~~~~gi~~~ii~~~Ga~E~ap~~---g~AD~IvDiv~TG~TLk~NgLk~id 182 (220)
T d1h3da1 118 LNGKRIATSYPHLL--KRYLDQKGISFKSCLLNGSVEVAPRA---GLADAICDLVSTGATLEANGLREVE 182 (220)
T ss_dssp GTTCEEEESCHHHH--HHHHHHHTCCCEEEECSSCTTHHHHT---TSCSEEEEEESSCHHHHHTTEEEEE
T ss_pred cCCCEEhhhhhHHH--HHHHHhccccceeeeccccccceecC---CCeeEEEEeccchHHHHHCcCEEee
Confidence 47888887765 789998864 556555433433221 1111 111 2556677899999986
No 44
>d2fyia1 c.94.1.1 (A:88-307) LysR-type regulatory protein Cbl {Escherichia coli [TaxId: 562]}
Probab=31.76 E-value=1.1e+02 Score=23.69 Aligned_cols=120 Identities=10% Similarity=0.084 Sum_probs=63.4
Q ss_pred HCCCCcc-cCCCCHHHHHHHHHhCCCCeEEEeeecccc-ccccccccccccCCeEEEEEEEEeeeeeeecCCCCCcCCc-
Q 016702 117 AYPKCET-VPCDEFEDTFKAVELWLADKAVLPIENSSS-GSIHRNYDLLLRHRLHIVGEVQLAANFCLLALPGIKADQL- 193 (384)
Q Consensus 117 ~f~~~~~-~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~-G~V~~tlDlL~~~~l~I~gEi~l~I~h~Ll~~~g~~l~~I- 193 (384)
.+++.++ +-..+..++.+.+.+|++|+|++....+.. +... -.|.+..+. +..+-.|-+...+..+++++
T Consensus 31 ~~P~i~l~i~~~~~~~~~~~l~~g~~Di~i~~~~~~~~~~~~~---~~l~~~~~~----~v~~~~~~~~~~~~~~~~dL~ 103 (220)
T d2fyia1 31 LFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVA---FPWFRWHHS----LLVPHDHPLTQISPLTLESIA 103 (220)
T ss_dssp HCTTEEEEEEECCHHHHHHHHHHTSCSEEEESSSSTTCTTEEE---EEEEEECEE----EEEETTCGGGTSSSCCHHHHT
T ss_pred HCCCcEEEEEECCcHHHHHHHHhhhhhhhhhcccccccccccc---cccccccce----eeccccccccccCcchhhhhc
Confidence 4566554 336678899999999999999986442221 1111 011111111 22333444444443333333
Q ss_pred --cEEEecH--HHHHHHHHHHHhcCC---eEEecCCHHHHHHHHHhcCCCCeEEEcCHHH
Q 016702 194 --KRVLSHP--QALASSDIVLTQLGV---ARENVDDTASAAQYVASNGLRDAGAVASARA 246 (384)
Q Consensus 194 --~~VySHp--qAl~QC~~fL~~~~~---~~i~~~STA~AA~~v~~~~~~~~AAIas~~a 246 (384)
.-|.-.+ ....+..+|+.+.+. ....++|...+.+++..+ ...||.+..+
T Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g---~gi~ilp~~~ 160 (220)
T d2fyia1 104 KWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALG---LGIGLVAEQS 160 (220)
T ss_dssp TSCEEEECTTSTTHHHHHHHHHHTTCCCCEEEEESSHHHHHHHHHHT---SCEEEEEGGG
T ss_pred cccccccccccchHHHHHHHHhhcccCCceeEEEccHHHHHHHHhhc---ceEEeCcHHH
Confidence 3333322 223566667776643 235566777677777764 3456666543
No 45
>d1lsta_ c.94.1.1 (A:) Lysine-,arginine-,ornithine-binding (LAO) protein {Salmonella typhimurium [TaxId: 90371]}
Probab=29.25 E-value=31 Score=27.56 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=36.7
Q ss_pred ceEEEEECCCCcHHHHHHHHHC--CCCcccCCCCHHHHHHHHHhCCCCeEEE
Q 016702 97 KVRISFKGLPGSFSEDAALKAY--PKCETVPCDEFEDTFKAVELWLADKAVL 146 (384)
Q Consensus 97 ~~~Va~LGP~GTfS~~AA~~~f--~~~~~~~~~s~~~Vf~aV~~g~~d~gVv 146 (384)
..+|++. .|+..+.-....+ .+.+.+...+.++++.++.+|++|+.+.
T Consensus 111 ~~~i~v~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gr~D~~~~ 160 (238)
T d1lsta_ 111 GKHVGVL--QGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQ 160 (238)
T ss_dssp TCEEEEE--TTSHHHHHHHHHTGGGTCEEEEESSHHHHHHHHHTTSCSEEEE
T ss_pred CCEEEEE--ecchHHHHHHHhhhccccceeeeCCHHHHHHHHhhhcccEEEe
Confidence 4678875 5776555555444 3567889999999999999999998775
No 46
>d1i6aa_ c.94.1.1 (A:) Hydrogen peroxide-inducible genes LysR-type activator OxyR, regulatory domain {Escherichia coli [TaxId: 562]}
Probab=27.95 E-value=37 Score=26.00 Aligned_cols=143 Identities=12% Similarity=0.107 Sum_probs=72.0
Q ss_pred CCCceEEEEECCCCcH-HHHHH---HHHCCCCcc-cCCCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCe
Q 016702 94 DGTKVRISFKGLPGSF-SEDAA---LKAYPKCET-VPCDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRL 168 (384)
Q Consensus 94 ~~~~~~Va~LGP~GTf-S~~AA---~~~f~~~~~-~~~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l 168 (384)
+.++++||+...-+++ --.+. ++.|+++++ +-..+-.++++.+.+|+.|+|++.......+.... .+....+
T Consensus 3 l~G~lrig~~~~~~~~~lp~~l~~f~~~~P~v~l~i~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~~---~l~~~~~ 79 (212)
T d1i6aa_ 3 MSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKESEAFIEV---PLFDEPM 79 (212)
T ss_dssp TCEEEEEEECTTTHHHHHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEEECCGGGTTSEEE---EEEEEEE
T ss_pred CeEEEEEEeEHHHHHHHHHHHHHHHHHHCCCcEEEEEECCCccccccccccchhhhheecccccccccce---eccccce
Confidence 5577899986544442 11221 234566544 22467789999999999999999765443333221 1111111
Q ss_pred EEEEEEEEeeeeeeecCCCCCcCCcc--EEEecHHHHH---HHHHHHHhcCCeE---EecCCHHHHHHHHHhcCCCCeEE
Q 016702 169 HIVGEVQLAANFCLLALPGIKADQLK--RVLSHPQALA---SSDIVLTQLGVAR---ENVDDTASAAQYVASNGLRDAGA 240 (384)
Q Consensus 169 ~I~gEi~l~I~h~Ll~~~g~~l~~I~--~VySHpqAl~---QC~~fL~~~~~~~---i~~~STA~AA~~v~~~~~~~~AA 240 (384)
-+.++-.|-|..++..+++++. ....++.... +-.+|+.+.+... ..++|...+.++++.+ ...|
T Consensus 80 ----~~~~~~~hpla~~~~i~~~dl~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g---~Gia 152 (212)
T d1i6aa_ 80 ----LLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAG---SGIT 152 (212)
T ss_dssp ----EEEEETTSGGGGCSCEEGGGGTTSEEECCTTTTCSSCTTSSCSSCTTSEEECTTTTSCHHHHHHHHHTT---SCBE
T ss_pred ----EEEeecCChhhcCCcccchhhcceeEEEecCCCccchhhhhhhhcccccccceeecCCHHHHHHHHHcC---Cccc
Confidence 1234445556655544555553 3344443211 1111112223322 2345665566666664 3455
Q ss_pred EcCHHH
Q 016702 241 VASARA 246 (384)
Q Consensus 241 Ias~~a 246 (384)
|.+..+
T Consensus 153 ~lp~~~ 158 (212)
T d1i6aa_ 153 LLPALA 158 (212)
T ss_dssp EEEGGG
T ss_pred cchHHH
Confidence 555543
No 47
>d3dhxa1 d.58.18.13 (A:2-100) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=26.74 E-value=40 Score=24.49 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.5
Q ss_pred EEEEEeecCCCcHHHHHHHHHHHHhcCceEEEc
Q 016702 344 LFYIDFEASMADPRAQNALGHLQEFATFLRVLG 376 (384)
Q Consensus 344 ~FfID~eg~~~d~~v~~al~~L~~~~~~vkvLG 376 (384)
.+++++.|. +..+++|++-|++....+.++|
T Consensus 65 ~Lil~l~g~--~~~i~~al~~L~~~~v~vEvlg 95 (99)
T d3dhxa1 65 IMLTEMHGT--QQDTQAAIAWLQEHHVKVEVLG 95 (99)
T ss_dssp EEEEEEESC--HHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeeCC--HHHHHHHHHHHHHcCCeEEEee
Confidence 468899984 5789999999999999999999
No 48
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=25.44 E-value=27 Score=28.28 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=33.0
Q ss_pred ceEEEEECCCCcH-HHHHHHHHCCC--CcccCCCCHHHHHHHHHhCCCCeEEEe
Q 016702 97 KVRISFKGLPGSF-SEDAALKAYPK--CETVPCDEFEDTFKAVELWLADKAVLP 147 (384)
Q Consensus 97 ~~~Va~LGP~GTf-S~~AA~~~f~~--~~~~~~~s~~~Vf~aV~~g~~d~gVvP 147 (384)
.+|||+|.=+|+| ||..|.+..+- +++....+.+|+ ..+|.-|||
T Consensus 2 ~ikIGvl~l~G~~~~~~~al~~lg~~~~~v~~~~~~~~l------~~~D~lIlP 49 (218)
T d2abwa1 2 EITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDL------GLCDGLVIP 49 (218)
T ss_dssp CEEEEEECTTSCCHHHHHHHHTTCCTTEEEEEECSHHHH------HTCSEEEEC
T ss_pred CCEEEEEeCCCcHHHHHHHHHHcCCCceEEEEeCCHHHH------hhCCEEEEc
Confidence 5899999888997 67878777663 456666777664 247888887
No 49
>d1utha_ c.94.1.1 (A:) LysR-type regulatory protein DntR {Burkholderia sp. [TaxId: 36773]}
Probab=25.04 E-value=40 Score=26.19 Aligned_cols=146 Identities=16% Similarity=0.108 Sum_probs=72.0
Q ss_pred CCCceEEEEECCCCcHH-HH---HHHHHCCCCcccC-CCCHHHHHHHHHhCCCCeEEEeeeccccccccccccccccCCe
Q 016702 94 DGTKVRISFKGLPGSFS-ED---AALKAYPKCETVP-CDEFEDTFKAVELWLADKAVLPIENSSSGSIHRNYDLLLRHRL 168 (384)
Q Consensus 94 ~~~~~~Va~LGP~GTfS-~~---AA~~~f~~~~~~~-~~s~~~Vf~aV~~g~~d~gVvPiENS~~G~V~~tlDlL~~~~l 168 (384)
.++..+||....-+.+= -. .-.+.++++++.. ..+..++.+.+.+|++|+||........+.....+ ....+
T Consensus 10 ~~~~~rI~~~~~~~~~~lp~ll~~f~~~~P~v~l~i~~~~~~~~~~~l~~g~~D~~i~~~~~~~~~~~~~~l---~~~~~ 86 (219)
T d1utha_ 10 STRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFFQRRL---FRHRY 86 (219)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHHHCTTCEEEEECTTSSCHHHHHHHTSCCEEEECCTTCCTTEEEEEE---EEECE
T ss_pred cCCEEEEEEcHHHHHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHHHHhcCCceeeeeecccccccchhhhc---ccccc
Confidence 45667777652222110 01 1123456655432 23456778899999999999876644444433222 11122
Q ss_pred EEEEEEEEeeeeeeecCCCCCcCCc---cEEEecH--HHHHHHHHHHHhcCCe---EEecCCHHHHHHHHHhcCCCCeEE
Q 016702 169 HIVGEVQLAANFCLLALPGIKADQL---KRVLSHP--QALASSDIVLTQLGVA---RENVDDTASAAQYVASNGLRDAGA 240 (384)
Q Consensus 169 ~I~gEi~l~I~h~Ll~~~g~~l~~I---~~VySHp--qAl~QC~~fL~~~~~~---~i~~~STA~AA~~v~~~~~~~~AA 240 (384)
.++ .+- +.+.......+.+. ..+.-.+ ..-.+-..||.+++.. ...++|...+..+++.+ ...+
T Consensus 87 ~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~---~gi~ 158 (219)
T d1utha_ 87 VCM----FRK-DHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHST---DLIA 158 (219)
T ss_dssp EEE----EET-TCSSCCSSCCHHHHHHSEEEEECCTTSGGGGHHHHHHHTTCCCEEEEEESSSTTHHHHHHTS---SCBE
T ss_pred ccc----ccc-cchhhhccccHHHHhcCCcEEecCCcchhHHHHHHHHhcCCcccccccCCCHHHHHHHHhCC---Ccce
Confidence 111 111 22333322222221 1222211 1122445577776543 34566766677777764 4567
Q ss_pred EcCHHHHHHc
Q 016702 241 VASARAAEIY 250 (384)
Q Consensus 241 Ias~~aA~~y 250 (384)
|.++..++.+
T Consensus 159 i~p~~~~~~~ 168 (219)
T d1utha_ 159 TVPQRFAVRC 168 (219)
T ss_dssp EEEHHHHHHH
T ss_pred echHHHHHHh
Confidence 7777766543
No 50
>d2qrra1 d.58.18.13 (A:2-98) Methionine import ATP-binding protein MetN {Vibrio parahaemolyticus [TaxId: 670]}
Probab=24.34 E-value=48 Score=23.99 Aligned_cols=58 Identities=16% Similarity=0.183 Sum_probs=40.6
Q ss_pred hHHHHHHHHHhCCceeeeeeeee--CCCCCCccccCCCCCCcccccEEEEEEeecCCCcHHHHHHHHHHHHhcCceEEEc
Q 016702 299 VLFKALAVFALREINLTKIESRP--QRKRPLRVVDDSNNGTAKYFDYLFYIDFEASMADPRAQNALGHLQEFATFLRVLG 376 (384)
Q Consensus 299 aL~~~L~~F~~~~INLtkIESRP--~~~~~~~~~~~~~~~~~~~~~Y~FfID~eg~~~d~~v~~al~~L~~~~~~vkvLG 376 (384)
-+.++. ++.||+.+=|...= ..+.+ .| .+++++.| ++..+++|++-|++....+.++|
T Consensus 35 vis~l~---~~~~i~vnIL~g~i~~i~~~~--------~G-------~Lil~l~G--~~~~~~~Al~~L~~~~i~vEvlg 94 (97)
T d2qrra1 35 LMSQIS---RKYNIDVSILSSDLDYAGGVK--------FG-------MMVAELFG--NEQDDSAAIEYLRENNVKVEVLG 94 (97)
T ss_dssp HHHHHH---HHSCCEEEEEEEEEEEETTEE--------EE-------EEEEEEES--CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHH---HHHCCCeEEEEEeeEEeCCee--------EE-------EEEEEEEC--CHHHHHHHHHHHHHcCCeEEEee
Confidence 566665 55687777555433 22221 11 46889998 45789999999999999999987
No 51
>d2qswa1 d.58.18.13 (A:256-345) Methionine import ATP-binding protein MetN2 {Enterococcus faecalis [TaxId: 1351]}
Probab=22.86 E-value=44 Score=23.87 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=27.2
Q ss_pred EEEEEeecCCCcHHHHHHHHHHHHhcCceEEEc
Q 016702 344 LFYIDFEASMADPRAQNALGHLQEFATFLRVLG 376 (384)
Q Consensus 344 ~FfID~eg~~~d~~v~~al~~L~~~~~~vkvLG 376 (384)
.+++++.|. +..+++|++-|++....+.++|
T Consensus 58 ~L~l~l~G~--~~~i~~al~~L~~~~v~vEvi~ 88 (90)
T d2qswa1 58 SLYIQLLGE--EQNILAAIEGLRKLRVETEVIG 88 (90)
T ss_dssp EEEEEEESC--HHHHHHHHHHHHHTTCEEEESS
T ss_pred EEEEEEECC--HHHHHHHHHHHHHCCCEEEEec
Confidence 578899994 5789999999999998898887
No 52
>d1vpha_ d.273.1.1 (A:) Hypothetical protein SSO2532 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=22.44 E-value=15 Score=29.08 Aligned_cols=18 Identities=17% Similarity=0.514 Sum_probs=14.4
Q ss_pred CCCCCcccccEEEEEEeecCC
Q 016702 333 SNNGTAKYFDYLFYIDFEASM 353 (384)
Q Consensus 333 ~~~~~~~~~~Y~FfID~eg~~ 353 (384)
..+|+ |+.+||+|+++..
T Consensus 109 L~LGt---WQ~I~l~E~d~~~ 126 (138)
T d1vpha_ 109 LVRGT---WQNIFLVELDGPR 126 (138)
T ss_dssp ECCCT---TCEEEEEESSCCE
T ss_pred ECccC---ccEEEEEECcCCC
Confidence 34564 9999999999864
No 53
>d1xt8a1 c.94.1.1 (A:10-257) Putative amino-acid transporter CjaA {Campylobacter jejuni [TaxId: 197]}
Probab=22.25 E-value=1.8e+02 Score=23.22 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=59.0
Q ss_pred CcccCCCCHHHHHHHHHhCCCCeEEEeee--ccccccccccccccccCCeEEEEEEEEeeeeeeecCCCC---CcCCcc-
Q 016702 121 CETVPCDEFEDTFKAVELWLADKAVLPIE--NSSSGSIHRNYDLLLRHRLHIVGEVQLAANFCLLALPGI---KADQLK- 194 (384)
Q Consensus 121 ~~~~~~~s~~~Vf~aV~~g~~d~gVvPiE--NS~~G~V~~tlDlL~~~~l~I~gEi~l~I~h~Ll~~~g~---~l~~I~- 194 (384)
+++++. ++.+.+.++.+|+.|.++..+- ...+ ..+....+... ....++.+++. ++++++
T Consensus 55 i~~~~~-~~~~~~~~l~~g~~d~~~~~~~~t~~R~------~~~~fs~p~~~-------~~~~~~~~~~~~i~~~~dl~g 120 (248)
T d1xt8a1 55 VQFVLV-EAANRVEFLKSNKVDIILANFTQTPQRA------EQVDFCSPYMK-------VALGVAVPKDSNITSVEDLKD 120 (248)
T ss_dssp EEEEEC-CGGGHHHHHHTTSCSEECSSCBCCHHHH------TTEEECCCCEE-------EEEEEEEETTCCCCSSGGGTT
T ss_pred eeeeee-cccccccccccCcccccccccccchhhh------cceeecccccc-------cceeEEEecCcccchhhhhcc
Confidence 566776 4588999999999997653211 0000 01111112222 22334444332 233333
Q ss_pred -EEEecHHHHHHHHHHHHhc--CCeEEecCCHHHHHHHHHhcCCCCeEEEcCHHHH
Q 016702 195 -RVLSHPQALASSDIVLTQL--GVARENVDDTASAAQYVASNGLRDAGAVASARAA 247 (384)
Q Consensus 195 -~VySHpqAl~QC~~fL~~~--~~~~i~~~STA~AA~~v~~~~~~~~AAIas~~aA 247 (384)
+|....-... .+||.+. +++.+.+.|..++.+++.++ .-.++|.....+
T Consensus 121 ~~i~v~~gs~~--~~~l~~~~~~~~i~~~~s~~~~~~~l~~g--~vD~~i~~~~~~ 172 (248)
T d1xt8a1 121 KTLLLNKGTTA--DAYFTQNYPNIKTLKYDQNTETFAALMDK--RGDALSHDNTLL 172 (248)
T ss_dssp SEEEEETTSHH--HHHHHHHCTTSEEEEESSHHHHHHHHHTT--SSSEEEEEHHHH
T ss_pred ceeeecCCChH--HHhhhccccccccccccchhhHHHhhccc--ccccccccHHHH
Confidence 4443322111 4677764 67888999999999998886 344666655443
No 54
>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Probab=21.35 E-value=81 Score=22.84 Aligned_cols=48 Identities=17% Similarity=0.286 Sum_probs=33.4
Q ss_pred CCceEEEEECCCCcHH---HHHHHHHCC-C--CcccCCCCHHHHHHHHHhCCCC
Q 016702 95 GTKVRISFKGLPGSFS---EDAALKAYP-K--CETVPCDEFEDTFKAVELWLAD 142 (384)
Q Consensus 95 ~~~~~Va~LGP~GTfS---~~AA~~~f~-~--~~~~~~~s~~~Vf~aV~~g~~d 142 (384)
+.+..++..|+++|+| |.++-+.++ + ......++++++++.+......
T Consensus 5 ~t~~~~~i~g~P~s~SP~ihn~~~~~~gi~~~Y~~~~v~~l~~~~~~~~~~~~~ 58 (102)
T d1npya2 5 DTQLCMSLSGRPSNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIR 58 (102)
T ss_dssp TCEEEEEECSSCCSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEcCCcccCCHHHHHHHHHHcCCCeEEeeEecccHHHHHHHHhccccc
Confidence 4556678999999997 566666665 2 2345667899999888764443
Done!