Query 016705
Match_columns 384
No_of_seqs 112 out of 1063
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 18:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bol_A TSP36, small heat shock 100.0 1.3E-34 4.6E-39 279.1 20.5 186 10-230 97-312 (314)
2 3gla_A Low molecular weight he 99.9 1.8E-25 6.1E-30 179.2 13.0 98 9-130 2-99 (100)
3 4eld_A MJ16.5-P1, small heat s 99.9 1.7E-24 5.9E-29 188.2 12.3 105 9-138 55-160 (161)
4 4fei_A Heat shock protein-rela 99.9 3.4E-24 1.2E-28 173.9 12.0 95 8-131 3-97 (102)
5 1gme_A Heat shock protein 16.9 99.9 6.3E-24 2.1E-28 184.1 11.3 106 9-138 41-149 (151)
6 3aab_A Putative uncharacterize 99.9 1.8E-22 6.2E-27 168.3 11.5 95 10-132 23-119 (123)
7 3l1e_A Alpha-crystallin A chai 99.9 1.2E-21 4E-26 161.1 13.1 98 11-139 2-105 (106)
8 2wj5_A Heat shock protein beta 99.9 1.2E-21 4E-26 159.5 11.0 96 13-139 3-99 (101)
9 3q9p_A Heat shock protein beta 99.8 4.8E-20 1.7E-24 145.9 10.5 82 16-128 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.8 2E-19 6.9E-24 143.2 10.9 86 18-134 3-89 (90)
11 2klr_A Alpha-crystallin B chai 99.8 1.2E-19 4.2E-24 162.0 9.8 97 14-141 66-164 (175)
12 2bol_A TSP36, small heat shock 99.7 4.7E-18 1.6E-22 164.1 11.1 91 11-129 220-314 (314)
13 3q9p_A Heat shock protein beta 99.1 6.4E-10 2.2E-14 87.8 9.9 76 149-229 7-82 (85)
14 3l1e_A Alpha-crystallin A chai 99.0 1.8E-09 6.3E-14 88.5 10.2 79 150-233 13-91 (106)
15 2y1y_A Alpha-crystallin B chai 99.0 4.4E-09 1.5E-13 83.5 10.2 76 150-231 7-83 (90)
16 2wj5_A Heat shock protein beta 98.9 6.5E-09 2.2E-13 84.4 10.7 79 150-233 12-90 (101)
17 4fei_A Heat shock protein-rela 98.9 8.9E-09 3E-13 83.3 10.1 80 150-233 17-96 (102)
18 3gla_A Low molecular weight he 98.8 1.6E-08 5.4E-13 80.7 9.5 79 149-230 14-96 (100)
19 2xcm_C SGT1-like protein, cyto 98.8 1.2E-08 4E-13 79.6 8.0 82 11-131 2-83 (92)
20 1rl1_A Suppressor of G2 allele 98.8 1.5E-08 5.1E-13 82.6 8.6 85 9-132 7-91 (114)
21 2klr_A Alpha-crystallin B chai 98.8 2.4E-08 8.2E-13 89.2 9.7 78 148-231 72-150 (175)
22 4eld_A MJ16.5-P1, small heat s 98.7 3E-08 1E-12 86.0 8.9 80 149-231 66-150 (161)
23 3aab_A Putative uncharacterize 98.6 1.4E-07 4.7E-12 78.4 8.8 75 149-231 34-115 (123)
24 1gme_A Heat shock protein 16.9 98.6 1.5E-07 5.2E-12 81.4 9.4 80 149-233 53-139 (151)
25 3eud_A Protein SHQ1; CS domain 97.6 0.00061 2.1E-08 58.3 11.7 84 6-132 12-99 (115)
26 2k8q_A Protein SHQ1; beta-sand 97.6 0.0001 3.4E-09 64.4 6.3 79 10-131 2-84 (134)
27 1x5m_A Calcyclin-binding prote 97.2 0.0029 1E-07 52.9 11.2 82 11-131 20-105 (127)
28 1wh0_A Ubiquitin carboxyl-term 97.2 0.002 6.9E-08 55.3 9.5 94 11-134 19-116 (134)
29 1ejf_A Progesterone receptor P 96.9 0.0034 1.2E-07 52.4 8.7 80 11-130 2-82 (125)
30 1wgv_A KIAA1068 protein; CS do 96.7 0.01 3.5E-07 49.4 9.6 87 10-135 18-107 (124)
31 3igf_A ALL4481 protein; two-do 96.6 0.0044 1.5E-07 60.7 7.9 62 22-127 306-368 (374)
32 1wfi_A Nuclear distribution ge 96.3 0.029 1E-06 46.9 10.0 79 10-130 6-88 (131)
33 2o30_A Nuclear movement protei 96.1 0.03 1E-06 47.0 9.5 77 10-129 3-80 (131)
34 3qor_A Nuclear migration prote 96.0 0.047 1.6E-06 45.4 9.7 79 10-130 15-97 (121)
35 2kmw_A Uncharacterized protein 95.9 0.014 4.9E-07 50.8 6.7 82 10-133 3-85 (150)
36 2cg9_X CO-chaperone protein SB 95.9 0.0033 1.1E-07 53.5 2.4 87 9-130 4-98 (134)
37 2rh0_A NUDC domain-containing 95.5 0.13 4.5E-06 44.8 11.2 85 10-137 12-101 (157)
38 2xcm_C SGT1-like protein, cyto 90.2 1.2 4.1E-05 34.1 7.6 69 149-231 12-80 (92)
39 1rl1_A Suppressor of G2 allele 87.1 2.1 7.2E-05 34.3 7.4 69 149-231 19-87 (114)
40 1nkw_E 50S ribosomal protein L 84.2 2.8 9.7E-05 38.9 7.7 114 36-208 39-183 (212)
41 1rl6_A Protein (ribosomal prot 77.2 2.4 8.1E-05 38.1 4.5 113 36-207 11-154 (177)
42 1wgv_A KIAA1068 protein; CS do 66.5 25 0.00085 28.8 8.0 70 95-185 30-101 (124)
43 3bbo_I Ribosomal protein L6; l 65.3 3.7 0.00013 38.3 3.0 37 163-207 161-198 (223)
44 2rh0_A NUDC domain-containing 62.0 36 0.0012 29.4 8.5 66 149-230 23-88 (157)
45 3qor_A Nuclear migration prote 60.1 53 0.0018 26.9 8.9 67 149-230 26-94 (121)
46 2o30_A Nuclear movement protei 59.9 34 0.0012 28.3 7.7 64 150-230 15-78 (131)
47 3j21_F 50S ribosomal protein L 50.9 41 0.0014 30.3 7.2 18 163-180 125-142 (184)
48 1wfi_A Nuclear distribution ge 50.2 56 0.0019 26.8 7.5 67 150-231 18-86 (131)
49 1vq8_E 50S ribosomal protein L 49.1 49 0.0017 29.7 7.4 41 163-211 120-160 (178)
50 3r8s_G 50S ribosomal protein L 30.9 24 0.00083 31.5 2.4 38 163-208 117-155 (176)
51 3fhw_A Primosomal replication 25.8 57 0.002 27.2 3.7 39 172-212 67-105 (115)
52 1x5m_A Calcyclin-binding prote 24.0 2.9E+02 0.0099 22.4 8.7 69 95-185 31-103 (127)
No 1
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=100.00 E-value=1.3e-34 Score=279.13 Aligned_cols=186 Identities=16% Similarity=0.236 Sum_probs=150.0
Q ss_pred CCCeeeEEEeCC----eEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCc
Q 016705 10 PDPVSAIWEEDE----RSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDT 85 (384)
Q Consensus 10 ~~P~VDV~ETDD----eyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~ 85 (384)
+.|++||+|+++ +|+|.+ +|||++||||+|+++++.|+|+|+++....
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~--dlPG~~~edI~V~v~~~~L~I~ge~~~~~e-------------------------- 148 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYF--NVKNFKAEEITIKADKNKLVVRAQKSVACG-------------------------- 148 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEE--ECTTCCTTTEEEEEETTEEEEEECCBSSTT--------------------------
T ss_pred CCCccceEEcCCCCceEEEEEE--ECCCCchHHeEEEEECCEEEEEEEEeccCC--------------------------
Confidence 569999999999 999998 999999999999999999999998863211
Q ss_pred eEEeecccceEEEEEECCCCcccCcceEEee-cCcEEEEEEeecCCCCcceEEe------------------------cc
Q 016705 86 SSLNRPNDGKIEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFKRQRAFDLRNVAM------------------------GW 140 (384)
Q Consensus 86 ~~~rERs~GsFsRsI~LPe~VD~dkIkAsLe-NdGVLTITLPK~epe~~RrIaI------------------------g~ 140 (384)
.+|.+|+|+|+|.||.+||+++|+|+|+ | |||+|++||.+++. +.|+| |.
T Consensus 149 ---~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n-GVL~I~lPK~~~~~-~~I~it~~~ql~Iqp~s~~q~~l~vkg~~~~ 223 (314)
T 2bol_A 149 ---DAAMSESVGRSIPLPPSVDRNHIQATITTD-DVLVIEAPVNEPNY-KAIKLSPEKGLAIQPSEVQERQLAVKNKEGL 223 (314)
T ss_dssp ---CCCBCCCEEEEEECCTTBCGGGCEEEECSS-SEEEEEEEBSSCCT-TTEEEETTTEEEECCBCCSSCCSCCCSCCEE
T ss_pred ---CCEEEEEEEEEEECCCCccccccEEEEeCC-CEEEEEEeccCccc-ceeecccCCccCcCCCccccceeecccCCCC
Confidence 1267899999999999999999999999 8 99999999998763 44543 12
Q ss_pred ccccCCCCce-EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEe
Q 016705 141 EHAKDSKKGF-VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMD 219 (384)
Q Consensus 141 ~~~~~~~~g~-~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~ 219 (384)
+..++..+|. ++|++.||||+++|||+|.|++|.+.|+|.+...+.+...+.+.| +.|.|+|.+|++|||-.++|++.
T Consensus 224 ~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~-g~F~R~~~LP~~vd~~~i~A~~~ 302 (314)
T 2bol_A 224 EIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEH-REFYKAFVTPEVVDASKTQAEIV 302 (314)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------C-EEEEEEEECSSEECGGGCEEEEE
T ss_pred cEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEee-eEEEEEEECCCCcChHHeEEEEe
Confidence 2333443555 999999999999999999999999999998544322222234434 89999999999999999999996
Q ss_pred cceeEEEEehh
Q 016705 220 DAGVLTLTFKR 230 (384)
Q Consensus 220 d~~~~~~~~~~ 230 (384)
|||||++.-+
T Consensus 303 -dGvL~i~~Pk 312 (314)
T 2bol_A 303 -DGLMVVEAPL 312 (314)
T ss_dssp -TTEEEEEEEE
T ss_pred -CCEEEEEEec
Confidence 7999999644
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.93 E-value=1.8e-25 Score=179.18 Aligned_cols=98 Identities=24% Similarity=0.338 Sum_probs=87.9
Q ss_pred CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
.+.|++||+|++++|+|.+ +|||++++||+|+++++.|+|+|++....... ..+|++
T Consensus 2 ~~~P~~di~e~~~~~~v~~--~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~---------------------~~~~~~ 58 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYA--DLPGIDPSQIEVQMDKGILSIRGERKSESSTE---------------------TERFSR 58 (100)
T ss_dssp CSCCCEEEEECSSEEEEEE--ECTTSCGGGCEEEEETTEEEEEEEECCGGGSS---------------------GGGEEE
T ss_pred CccCcEEEEECCCEEEEEE--ECCCCCHHHEEEEEECCEEEEEEEEcCcCccC---------------------CccEEE
Confidence 5899999999999999999 99999999999999999999999987543211 126899
Q ss_pred eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCC
Q 016705 89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA 130 (384)
Q Consensus 89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~ep 130 (384)
+||.+|+|+|+|.||.+||+++|+|+|+| |||+|++||.++
T Consensus 59 ~er~~g~f~r~~~LP~~vd~~~i~A~~~~-GvL~I~~pK~~~ 99 (100)
T 3gla_A 59 IERRYGSFHRRFALPDSADADGITAAGRN-GVLEIRIPKRPA 99 (100)
T ss_dssp ECCCCEEEEEEEECCTTBCTTSCEEEEET-TEEEEEEEBC--
T ss_pred EeecceEEEEEEECCCCcChHHeEEEEeC-CEEEEEEecCCC
Confidence 99999999999999999999999999999 999999999875
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.91 E-value=1.7e-24 Score=188.19 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=94.5
Q ss_pred CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
.+.| +||+|++++|+|.+ +|||++++||+|+++++.|+|+|+++....... .+|++
T Consensus 55 ~~~p-vdi~e~~~~~~v~~--dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~---------------------~~~~~ 110 (161)
T 4eld_A 55 GFMP-ISIIEGDQHIKVIA--WLPGVNKEDIILNAVGDTLEIRAKRSPLMITES---------------------ERIIY 110 (161)
T ss_dssp SCCC-EEEEECSSEEEEEE--ECTTCCGGGEEEEEETTEEEEEEECCCCCCCSS---------------------CEEEE
T ss_pred cccc-eeEEEeCCEEEEEE--ECCCCChHhEEEEEECCEEEEEEEEcccccCCC---------------------ceEEE
Confidence 4455 99999999999999 999999999999999999999999875433221 25889
Q ss_pred eec-ccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcceEEe
Q 016705 89 NRP-NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAM 138 (384)
Q Consensus 89 rER-s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~RrIaI 138 (384)
+|| .+|+|+|+|.||.+||.++|+|+|+| |||+|++||.+..++|+|+|
T Consensus 111 ~Er~~~g~f~R~~~LP~~vd~~~i~A~~~n-GvL~I~lpK~~~~~~r~I~I 160 (161)
T 4eld_A 111 SEIPEEEEIYRTIKLPATVKEENASAKFEN-GVLSVILPKAESSIKKGINI 160 (161)
T ss_dssp ECSCCCCEEEEEEECSSCBCGGGCEEEEET-TEEEEEEEBCGGGSCCCCCC
T ss_pred EEeeccccEEEEEECCCCcccccEEEEEEC-CEEEEEEEcCCCCCCcEeec
Confidence 999 99999999999999999999999999 99999999999999999987
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.91 E-value=3.4e-24 Score=173.90 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=87.3
Q ss_pred CCCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705 8 KKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS 87 (384)
Q Consensus 8 ~~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~ 87 (384)
..+.|++||+|++++|+|.+ +|||++++||+|+++++.|+|+|+++.+ . +|+
T Consensus 3 g~~~P~~di~e~~~~~~v~~--~lPG~~~edi~v~~~~~~L~I~g~~~~~-----~---------------------~~~ 54 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLL--DVPGVDAGTLALAEDGGQLTVSGERPGT-----E---------------------HLL 54 (102)
T ss_dssp EECCCCEEEEEETTEEEEEE--ECTTCCGGGCEEEEETTEEEEEEEECCC-----S---------------------SCS
T ss_pred CcccCcEEEEEcCCEEEEEE--ECCCCchHhEEEEEECCEEEEEEEEecC-----C---------------------CEE
Confidence 35889999999999999999 9999999999999999999999998431 1 467
Q ss_pred EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705 88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF 131 (384)
Q Consensus 88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe 131 (384)
.+||.+|+|+|+|.||.+||+++++|+|+| |||+|++||.++.
T Consensus 55 ~~er~~g~f~R~~~LP~~vd~~~i~A~~~~-GvL~I~lpK~~~~ 97 (102)
T 4fei_A 55 RSERPSGRFVRELAFPEPVRPASGVASLAG-GVLTVRFEKLRPT 97 (102)
T ss_dssp SCCSEEEEEEEEEECSSCBCTTCCEEEEET-TEEEEEEEBSSCC
T ss_pred EEEEeccEEEEEEECCCCcchhHcEEEEEC-CEEEEEEEccCcc
Confidence 799999999999999999999999999999 9999999998875
No 5
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.90 E-value=6.3e-24 Score=184.12 Aligned_cols=106 Identities=21% Similarity=0.260 Sum_probs=92.9
Q ss_pred CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEE-CCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705 9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQ-DGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS 87 (384)
Q Consensus 9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVd-ddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~ 87 (384)
.+.|++||+|++++|+|.+ +|||++++||+|+++ ++.|+|+|+++.....+. .+|+
T Consensus 41 ~~~p~~di~e~~d~~~v~~--dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~---------------------~~~~ 97 (151)
T 1gme_A 41 FANARMDWKETPEAHVFKA--DLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKN---------------------DKWH 97 (151)
T ss_dssp HGGGCEEEEECSSEEEEEE--ECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTT---------------------CEEE
T ss_pred ccCCceEEEEcCCEEEEEE--ECCCCChHHEEEEEecCCEEEEEEEEccccccCC---------------------ceEE
Confidence 3579999999999999999 999999999999995 689999998865543221 2689
Q ss_pred EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCc--ceEEe
Q 016705 88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDL--RNVAM 138 (384)
Q Consensus 88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~--RrIaI 138 (384)
++||.+|+|+|+|.||.+||.++|+|+|+| |||+|++||..++++ |+|+|
T Consensus 98 ~~Er~~g~F~R~~~LP~~vd~~~i~A~~~n-GvL~I~lPK~~~~~~~~~~I~I 149 (151)
T 1gme_A 98 RVERSSGKFVRRFRLLEDAKVEEVKAGLEN-GVLTVTVPKAEVKKPEVKAIQI 149 (151)
T ss_dssp ECCCCCCCEEEEEECSSCCCGGGCEEEEET-TEEEEEEECCCCCTTCCCCCCC
T ss_pred EEeEeccEEEEEEECCCCccccceEEEEEC-CEEEEEEEccCcCCCCCeEeee
Confidence 999999999999999999999999999999 999999999987655 66665
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.88 E-value=1.8e-22 Score=168.31 Aligned_cols=95 Identities=22% Similarity=0.291 Sum_probs=86.9
Q ss_pred CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEEC-CEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQD-GKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdd-dvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
+.|++||+|++++|++.+ +|||++++||+|++++ +.|+|+|+++... . .+|+.
T Consensus 23 ~~P~~di~e~~~~~~v~~--~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~---------------------~~~~~ 76 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVA--DLAGFNKEKIKARVSGQNELIIEAEREITE---P---------------------GVKYL 76 (123)
T ss_dssp HCSCEEEEEETTEEEEEE--ECCSCCGGGCEEEEETTTEEEEEEECCCCC---C---------------------SCEEE
T ss_pred CCCcEEEEEcCCEEEEEE--ECCCCCHHHEEEEEeCCCEEEEEEEEeccC---C---------------------CeEEE
Confidence 469999999999999999 9999999999999999 9999999986543 1 15889
Q ss_pred eecccceEEEEEECCCCcccCcc-eEEeecCcEEEEEEeecCCCC
Q 016705 89 NRPNDGKIEMNFSLPVGVDPDGF-STSMDDAGVLTLTFKRQRAFD 132 (384)
Q Consensus 89 rERs~GsFsRsI~LPe~VD~dkI-kAsLeNdGVLTITLPK~epe~ 132 (384)
+||.+ +|+|+|.||.+||.++| +|+|+| |||+|++||.+..+
T Consensus 77 ~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~-GvL~I~lPK~~~~~ 119 (123)
T 3aab_A 77 TQRPK-YVRKVIRLPYNVAKDAEISGKYEN-GVLTIRIPIAGTSV 119 (123)
T ss_dssp ECSCS-EEEEEEECSSEECTTCCCEEEEET-TEEEEEEEGGGEEC
T ss_pred EEEeE-EEEEEEECCCCcCcchhCeeEEcC-CEEEEEEEcCCCCc
Confidence 99999 99999999999999999 999999 99999999988654
No 7
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.87 E-value=1.2e-21 Score=161.06 Aligned_cols=98 Identities=18% Similarity=0.279 Sum_probs=84.9
Q ss_pred CCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705 11 DPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR 90 (384)
Q Consensus 11 ~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE 90 (384)
.+..||+|++++|+|.+ +||||+++||+|+++++.|+|+|++..... +. .|+.+
T Consensus 2 sg~~~i~e~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~~- 55 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFL--DVKHFSPEDLTVKVQEDFVEIHGKHNERQD--DH---------------------GYISR- 55 (106)
T ss_dssp CCSEEEEECSSEEEEEE--ECTTSCGGGEEEEEETTEEEEEEEEEEEET--TT---------------------EEEEE-
T ss_pred CCceEEEEcCCEEEEEE--ECCCCChHHEEEEEECCEEEEEEEEccccC--CC---------------------CEEEE-
Confidence 35589999999999999 999999999999999999999999764322 11 24444
Q ss_pred cccceEEEEEECCCCcccCcceEEe-ecCcEEEEEEeecCCC-----CcceEEec
Q 016705 91 PNDGKIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAF-----DLRNVAMG 139 (384)
Q Consensus 91 Rs~GsFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe-----~~RrIaIg 139 (384)
+|+|+|.||.+||+++|+|+| +| |||+|++||.+++ ++|+|+|.
T Consensus 56 ----eF~R~~~LP~~vd~~~i~A~~s~~-GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 56 ----EFHRRYRLPSNVDQSALSCSLSAD-GMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp ----EEEEEEECCTTBCTTSCEEEECTT-SEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred ----EEEEEEECCCCcChhHcEEEECCC-CEEEEEEEccCcccccCCCCeEeeec
Confidence 599999999999999999999 78 9999999999886 67999885
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.86 E-value=1.2e-21 Score=159.55 Aligned_cols=96 Identities=11% Similarity=0.178 Sum_probs=82.6
Q ss_pred eeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecc
Q 016705 13 VSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPN 92 (384)
Q Consensus 13 ~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs 92 (384)
.+||+|++++|+|.+ +|||++++||+|+++++.|+|+|++..... +. .|+.+|
T Consensus 3 ~vdi~e~~~~~~v~~--dlPG~~~edI~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~~e-- 55 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLL--DVKHFSPEEISVKVVGDHVEVHARHEERPD--EH---------------------GFIARE-- 55 (101)
T ss_dssp CCCCCCCSSCEEEEE--ECTTSCGGGEEEEEETTEEEEEEEEEECSS--TT---------------------CCEEEE--
T ss_pred cEEEEEeCCEEEEEE--ECCCCcHHHeEEEEECCEEEEEEEEecccC--CC---------------------CEEEEE--
Confidence 479999999999998 999999999999999999999999975421 11 355554
Q ss_pred cceEEEEEECCCCcccCcceEEe-ecCcEEEEEEeecCCCCcceEEec
Q 016705 93 DGKIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAFDLRNVAMG 139 (384)
Q Consensus 93 ~GsFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe~~RrIaIg 139 (384)
|+|+|.||.+||+++|+|+| +| |||+|++||.++.++|.++|-
T Consensus 56 ---F~R~~~LP~~vd~~~i~A~~s~n-GvL~I~lPK~~~~~~~~~~i~ 99 (101)
T 2wj5_A 56 ---FHRRYRLPPGVDPAAVTSALSPE-GVLSIQATPASAQASLPSPPA 99 (101)
T ss_dssp ---EEEEEECCTTBCTTCCEEEECTT-SEEEEEECBCCCCCSSCC---
T ss_pred ---EEEEEECCCCcChhHCEEEECCC-CEEEEEEECCCcCCCCCCccc
Confidence 99999999999999999999 78 999999999999988887763
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.82 E-value=4.8e-20 Score=145.90 Aligned_cols=82 Identities=18% Similarity=0.242 Sum_probs=69.4
Q ss_pred EEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccce
Q 016705 16 IWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGK 95 (384)
Q Consensus 16 V~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~Gs 95 (384)
+.|++++|+|.+ +|||++++||+|+++++.|+|+|+++..... .+..+++
T Consensus 2 ~~E~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~----------------------------~~~~~~~ 51 (85)
T 3q9p_A 2 GSHTADRWRVSL--DVNHFAPDELTVKTKDGVVEITGKHAARQDE----------------------------HGYISRC 51 (85)
T ss_dssp -CCCCCEEEEEE--ECTTTCCSEEEEEEETTEEEEEEEEC-----------------------------------CCCEE
T ss_pred ccCcCCEEEEEE--ECCCCChHHEEEEEECCEEEEEEEEccccCC----------------------------CCEEEEE
Confidence 468999999999 9999999999999999999999998654211 1123569
Q ss_pred EEEEEECCCCcccCcceEEee-cCcEEEEEEeec
Q 016705 96 IEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFKRQ 128 (384)
Q Consensus 96 FsRsI~LPe~VD~dkIkAsLe-NdGVLTITLPK~ 128 (384)
|+|+|.||.+||+++|+|+|+ | |||+|++||.
T Consensus 52 F~R~~~LP~~vd~~~i~A~~~~~-GvL~I~lPK~ 84 (85)
T 3q9p_A 52 FTRKYTLPPGVDPTQVSSSLSPE-GTLTVEAPMP 84 (85)
T ss_dssp EEEEEECCTTCCGGGCEEEECTT-SEEEEEEECC
T ss_pred EEEEEECCCCcChHHcEEEECCC-CEEEEEEEcC
Confidence 999999999999999999998 8 9999999995
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.80 E-value=2e-19 Score=143.20 Aligned_cols=86 Identities=19% Similarity=0.247 Sum_probs=68.2
Q ss_pred EeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEE
Q 016705 18 EEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIE 97 (384)
Q Consensus 18 ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFs 97 (384)
++++.|+|.+ +|||++++||+|+++++.|+|+|++..... . ..|+.+ +|+
T Consensus 3 ~~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--~---------------------~~~~~~-----ef~ 52 (90)
T 2y1y_A 3 MEKDRFSVNL--DVKHFSPEELKVKVLGDVIEVHGKHEERQD--E---------------------HGFISR-----EFH 52 (90)
T ss_dssp ---CCEEEEE--ECTTSCGGGEEEEEETTEEEEEEEEEEEEC--S---------------------SSEEEE-----EEE
T ss_pred cCCCEEEEEE--ECCCCcHHHeEEEEECCEEEEEEEEecccC--C---------------------CCEEEE-----EEE
Confidence 6789999999 999999999999999999999999875421 1 135555 499
Q ss_pred EEEECCCCcccCcceEEe-ecCcEEEEEEeecCCCCcc
Q 016705 98 MNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAFDLR 134 (384)
Q Consensus 98 RsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe~~R 134 (384)
|+|.||.+||.++|+|+| +| |||+|++||.+++++|
T Consensus 53 R~~~LP~~vd~~~i~A~~~~~-GvL~I~~pK~~~~~p~ 89 (90)
T 2y1y_A 53 RKYRIPADVDPLTITSSMSSD-GVLTVNGPRKQVSGPE 89 (90)
T ss_dssp EEEECCTTBCGGGCEEEECTT-SEEEEEECBC------
T ss_pred EEEECCCCcChhHcEEEECCC-CEEEEEEEcCCCCCCC
Confidence 999999999999999999 78 9999999999887766
No 11
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.80 E-value=1.2e-19 Score=161.99 Aligned_cols=97 Identities=19% Similarity=0.260 Sum_probs=71.9
Q ss_pred eeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeeccc
Q 016705 14 SAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPND 93 (384)
Q Consensus 14 VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~ 93 (384)
+||+|++++|+|.+ +|||+++|||+|+++++.|+|+|+++.... + ..|+.+
T Consensus 66 ~dv~e~~d~~~v~~--dlPG~~~edI~V~v~~~~L~I~g~~~~~~~--~---------------------~~~~~r---- 116 (175)
T 2klr_A 66 SEMRLEKDRFSVNL--DVKHFSPEELKVKVLGDVIEVHGKHEERQD--E---------------------HGFISR---- 116 (175)
T ss_dssp ---CCCCSEEEEEE--CCSSCCGGGEEEEEETTEEEEEEEEEEEEE--T---------------------TEEEEE----
T ss_pred eEEEEcCCeEEEEE--ECCCCChHHEEEEEECCEEEEEEEEccccc--C---------------------CceEEE----
Confidence 79999999999999 999999999999999999999999865421 1 135555
Q ss_pred ceEEEEEECCCCcccCcceEEe-ecCcEEEEEEeecCCCC-cceEEeccc
Q 016705 94 GKIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAFD-LRNVAMGWE 141 (384)
Q Consensus 94 GsFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe~-~RrIaIg~~ 141 (384)
+|+|+|.||.+||.++|+|+| +| |||+|++||.+..+ .|+|+|..+
T Consensus 117 -eF~R~~~LP~~Vd~~~i~A~~s~d-GvL~I~lPK~~~~~~~r~I~I~~~ 164 (175)
T 2klr_A 117 -EFHRKYRIPADVDPLTITSSLSSD-GVLTVNGPRKQVSGPERTIPITRE 164 (175)
T ss_dssp -EEEEEEECTTTCCTTTCEEEECTT-SCEEEEEECC--------------
T ss_pred -EEEEEEECCCCcChhHeEEEEcCC-CEEEEEEECCCCCCCCeEEEEecC
Confidence 499999999999999999999 68 99999999988755 499999654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.74 E-value=4.7e-18 Score=164.10 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=71.5
Q ss_pred CCeeeEEEeC---CeEEEEEeccC-CCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705 11 DPVSAIWEED---ERSVHFKVFLA-SGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS 86 (384)
Q Consensus 11 ~P~VDV~ETD---DeyII~A~FDL-PGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~ 86 (384)
...++|.+++ ++|++.+ +| ||++|+||+|+++++.|+|+|+++.+.. .+
T Consensus 220 ~~~~~i~e~~~~~~~~~v~~--~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~-------------------------~~ 272 (314)
T 2bol_A 220 KEGLEIVTAEDGSKKIHLEL--KVDPHFAPKDVKVWAKGNKVYVHGVTGKEEK-------------------------TE 272 (314)
T ss_dssp CCEEEEEECTTSCEEEEEEE--ECCTTCCGGGEEEEESSSEEEEEEEEC-------------------------------
T ss_pred CCCCcEEEecCCCcEEEEEE--EcCCCCChHHeEEEEECCEEEEEEEEeccCC-------------------------ce
Confidence 4557888876 3566666 99 9999999999999999999999875422 26
Q ss_pred EEeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecC
Q 016705 87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQR 129 (384)
Q Consensus 87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~e 129 (384)
+++||.+|+|+|+|.||++||+++|+|+|+| |||+|++||..
T Consensus 273 ~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~d-GvL~i~~Pk~~ 314 (314)
T 2bol_A 273 NASHSEHREFYKAFVTPEVVDASKTQAEIVD-GLMVVEAPLFK 314 (314)
T ss_dssp ------CEEEEEEEECSSEECGGGCEEEEET-TEEEEEEEEEC
T ss_pred EEEEEeeeEEEEEEECCCCcChHHeEEEEeC-CEEEEEEecCC
Confidence 7789999999999999999999999999999 99999999963
No 13
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.07 E-value=6.4e-10 Score=87.80 Aligned_cols=76 Identities=22% Similarity=0.260 Sum_probs=59.6
Q ss_pred ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF 228 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~ 228 (384)
..+.|++.| ||+++|||.|.++.|.+.|+|.+...+.+.. . +++.|.|+|.+|+.|||=.++|++..||||+++.
T Consensus 7 ~~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~~~~~~~--~--~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 7 DRWRVSLDV-NHFAPDELTVKTKDGVVEITGKHAARQDEHG--Y--ISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp CEEEEEEEC-TTTCCSEEEEEEETTEEEEEEEEC---------C--CCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred CEEEEEEEC-CCCChHHEEEEEECCEEEEEEEEccccCCCC--E--EEEEEEEEEECCCCcChHHcEEEECCCCEEEEEE
Confidence 346666766 8999999999999999999998544322111 1 2367889999999999999999999899999986
Q ss_pred h
Q 016705 229 K 229 (384)
Q Consensus 229 ~ 229 (384)
.
T Consensus 82 P 82 (85)
T 3q9p_A 82 P 82 (85)
T ss_dssp E
T ss_pred E
Confidence 4
No 14
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.01 E-value=1.8e-09 Score=88.48 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=63.4
Q ss_pred eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705 150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK 229 (384)
Q Consensus 150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~ 229 (384)
.+.|++.| |||++|||.|.++.|.+.|+|.+..+. +.. ..++.+|.|+|.+|+.||+=.++|++..||||++++.
T Consensus 13 ~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~~~-~~~---~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~P 87 (106)
T 3l1e_A 13 KFVIFLDV-KHFSPEDLTVKVQEDFVEIHGKHNERQ-DDH---GYISREFHRRYRLPSNVDQSALSCSLSADGMLTFSGP 87 (106)
T ss_dssp EEEEEEEC-TTSCGGGEEEEEETTEEEEEEEEEEEE-TTT---EEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEEEE
T ss_pred EEEEEEEC-CCCChHHEEEEEECCEEEEEEEEcccc-CCC---CEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 35566666 899999999999999999999854432 211 1133567799999999999999999988999999998
Q ss_pred hhcc
Q 016705 230 RLMP 233 (384)
Q Consensus 230 ~~~~ 233 (384)
+.-|
T Consensus 88 K~~~ 91 (106)
T 3l1e_A 88 KIPS 91 (106)
T ss_dssp BCCC
T ss_pred ccCc
Confidence 7665
No 15
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=98.95 E-value=4.4e-09 Score=83.50 Aligned_cols=76 Identities=22% Similarity=0.287 Sum_probs=61.7
Q ss_pred eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeec-cccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705 150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYH-GNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF 228 (384)
Q Consensus 150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h-~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~ 228 (384)
.+.|++.| ||+++|||.|.++.|.+.|+|.+.. ++++ ..|| .+|.|+|.+|+.||+=.++|++..||||++++
T Consensus 7 ~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~-~~~~----~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 7 RFSVNLDV-KHFSPEELKVKVLGDVIEVHGKHEE-RQDE----HGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp CEEEEEEC-TTSCGGGEEEEEETTEEEEEEEEEE-EECS----SSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred EEEEEEEC-CCCcHHHeEEEEECCEEEEEEEEec-ccCC----CCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 36666776 7999999999999999999998544 2221 1243 56779999999999999999998899999998
Q ss_pred hhh
Q 016705 229 KRL 231 (384)
Q Consensus 229 ~~~ 231 (384)
.+.
T Consensus 81 pK~ 83 (90)
T 2y1y_A 81 PRK 83 (90)
T ss_dssp CBC
T ss_pred EcC
Confidence 664
No 16
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=98.93 E-value=6.5e-09 Score=84.39 Aligned_cols=79 Identities=14% Similarity=0.216 Sum_probs=62.8
Q ss_pred eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705 150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK 229 (384)
Q Consensus 150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~ 229 (384)
.+.+++.| ||+++|||.|.++.|.+.|+|.+.. ++++ .+-++.+|.|+|.+|+.||+=.++|++..||||++++.
T Consensus 12 ~~~v~~dl-PG~~~edI~V~v~~~~L~I~g~~~~-~~~~---~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I~lP 86 (101)
T 2wj5_A 12 YFSVLLDV-KHFSPEEISVKVVGDHVEVHARHEE-RPDE---HGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAT 86 (101)
T ss_dssp CEEEEEEC-TTSCGGGEEEEEETTEEEEEEEEEE-CSST---TCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEEEEC
T ss_pred EEEEEEEC-CCCcHHHeEEEEECCEEEEEEEEec-ccCC---CCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEEEEE
Confidence 35666766 7999999999999999999998543 2221 11133567799999999999999999988999999987
Q ss_pred hhcc
Q 016705 230 RLMP 233 (384)
Q Consensus 230 ~~~~ 233 (384)
+.-+
T Consensus 87 K~~~ 90 (101)
T 2wj5_A 87 PASA 90 (101)
T ss_dssp BCCC
T ss_pred CCCc
Confidence 6543
No 17
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.89 E-value=8.9e-09 Score=83.27 Aligned_cols=80 Identities=25% Similarity=0.384 Sum_probs=64.0
Q ss_pred eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705 150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK 229 (384)
Q Consensus 150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~ 229 (384)
.+.|++.| ||++.|||.|.++.|.+.|+|... .+..-....+.| +.|.|+|.+|+.||+=.++|++. ||||++++.
T Consensus 17 ~~~v~~~l-PG~~~edi~v~~~~~~L~I~g~~~-~~~~~~~~er~~-g~f~R~~~LP~~vd~~~i~A~~~-~GvL~I~lp 92 (102)
T 4fei_A 17 HLDLLLDV-PGVDAGTLALAEDGGQLTVSGERP-GTEHLLRSERPS-GRFVRELAFPEPVRPASGVASLA-GGVLTVRFE 92 (102)
T ss_dssp EEEEEEEC-TTCCGGGCEEEEETTEEEEEEEEC-CCSSCSSCCSEE-EEEEEEEECSSCBCTTCCEEEEE-TTEEEEEEE
T ss_pred EEEEEEEC-CCCchHhEEEEEECCEEEEEEEEe-cCCCEEEEEEec-cEEEEEEECCCCcchhHcEEEEE-CCEEEEEEE
Confidence 46666766 799999999999999999999853 233333333334 78889999999999999999995 899999998
Q ss_pred hhcc
Q 016705 230 RLMP 233 (384)
Q Consensus 230 ~~~~ 233 (384)
+.-|
T Consensus 93 K~~~ 96 (102)
T 4fei_A 93 KLRP 96 (102)
T ss_dssp BSSC
T ss_pred ccCc
Confidence 7654
No 18
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.83 E-value=1.6e-08 Score=80.69 Aligned_cols=79 Identities=23% Similarity=0.390 Sum_probs=60.6
Q ss_pred ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcc----eeeeccccceEeeCCCccCcceeeEEEecceeE
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTS----VKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVL 224 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~----~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~ 224 (384)
..+.|++.| ||+++|||.|.++.|.+.|+|.......+.... .+.| +.|.|+|.+|+.||+=.++|++. ||||
T Consensus 14 ~~~~v~~~l-PG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~-g~f~r~~~LP~~vd~~~i~A~~~-~GvL 90 (100)
T 3gla_A 14 NHFVLYADL-PGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRY-GSFHRRFALPDSADADGITAAGR-NGVL 90 (100)
T ss_dssp SEEEEEEEC-TTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCC-EEEEEEEECCTTBCTTSCEEEEE-TTEE
T ss_pred CEEEEEEEC-CCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecc-eEEEEEEECCCCcChHHeEEEEe-CCEE
Confidence 346666666 899999999999999999999754432221111 1112 57889999999999999999996 6999
Q ss_pred EEEehh
Q 016705 225 TLTFKR 230 (384)
Q Consensus 225 ~~~~~~ 230 (384)
++++.+
T Consensus 91 ~I~~pK 96 (100)
T 3gla_A 91 EIRIPK 96 (100)
T ss_dssp EEEEEB
T ss_pred EEEEec
Confidence 999865
No 19
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.81 E-value=1.2e-08 Score=79.59 Aligned_cols=82 Identities=13% Similarity=0.157 Sum_probs=72.3
Q ss_pred CCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705 11 DPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR 90 (384)
Q Consensus 11 ~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE 90 (384)
.|++|++++++.+.|++ .+||+.+++++|+++++.|.|++... .+
T Consensus 2 ~~~~~W~Qt~~~V~v~i--~~~~v~~~~v~v~~~~~~l~v~~~~~------~~--------------------------- 46 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTV--FAKGIPKQNVNIDFGEQILSVVIEVP------GE--------------------------- 46 (92)
T ss_dssp CSEEEEEEETTEEEEEE--ECCSCCGGGEEEEECSSBEEEEECCT------TS---------------------------
T ss_pred CccccEEeCCCEEEEEE--EECCCChHHeEEEEECCEEEEEEEcC------CC---------------------------
Confidence 58999999999999988 99999999999999999999987431 11
Q ss_pred cccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705 91 PNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF 131 (384)
Q Consensus 91 Rs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe 131 (384)
..|...+.|+..|++++.++++.+ |.|.|+|+|..+.
T Consensus 47 ---~~y~~~~~L~~~I~~~~s~~~~~~-~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 47 ---DAYYLQPRLFGKIIPDKCKYEVLS-TKIEICLAKADII 83 (92)
T ss_dssp ---CCEEECCBBSSCBCGGGCEEEECS-SCEEEEEEBSSSC
T ss_pred ---cEEEEeeEcCCccCchhEEEEEEC-CEEEEEEEcCCCC
Confidence 158889999999999999999999 9999999998754
No 20
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.80 E-value=1.5e-08 Score=82.60 Aligned_cols=85 Identities=9% Similarity=0.191 Sum_probs=74.2
Q ss_pred CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
...|++|++++++.+.|++ .+||+++++++|+++++.|.|++... .+
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i--~l~~v~~~~v~v~~~~~~l~v~~~~~------~~------------------------- 53 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITL--MIKNVQKNDVNVEFSEKELSALVKLP------SG------------------------- 53 (114)
T ss_dssp -CCCCEEEEECSSEEEEEE--CCCSCCGGGEEEECSSSCEEEEEECT------TS-------------------------
T ss_pred CCCCCccEEeCCCEEEEEE--EeCCCCHHHCEEEEEcCEEEEEEEeC------CC-------------------------
Confidence 4678899999999999888 99999999999999999999998531 11
Q ss_pred eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCC
Q 016705 89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFD 132 (384)
Q Consensus 89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~ 132 (384)
..|.+.+.|+..|++++.++++.+ |.|+|+|+|..+..
T Consensus 54 -----~~y~~~~~L~~~I~~e~s~~~~~~-~~l~i~L~K~~~~~ 91 (114)
T 1rl1_A 54 -----EDYNLKLELLHPIIPEQSTFKVLS-TKIEIKLKKPEAVR 91 (114)
T ss_dssp -----SEEEEEECBSSCCCGGGEEEEECS-SSEEEEEECSSCCC
T ss_pred -----cEEEEEeeCCCcCCccccEEEEEC-CEEEEEEEcCCCCc
Confidence 168899999999999999999999 99999999987643
No 21
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=98.77 E-value=2.4e-08 Score=89.18 Aligned_cols=78 Identities=22% Similarity=0.297 Sum_probs=63.0
Q ss_pred CceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeec-cccceEeeCCCccCcceeeEEEecceeEEE
Q 016705 148 KGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYH-GNNFRSFLFPDGVDPFGFSTSMDDAGVLTL 226 (384)
Q Consensus 148 ~g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h-~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~ 226 (384)
+..+.|++.| ||+++|||.|.++.|.+.|+|.+..+ +++ .+|| .+|.|+|.+|+.||+=.++|++..||||++
T Consensus 72 ~d~~~v~~dl-PG~~~edI~V~v~~~~L~I~g~~~~~-~~~----~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 72 KDRFSVNLDV-KHFSPEELKVKVLGDVIEVHGKHEER-QDE----HGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp CSEEEEEECC-SSCCGGGEEEEEETTEEEEEEEEEEE-EET----TEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred CCeEEEEEEC-CCCChHHEEEEEECCEEEEEEEEccc-ccC----CceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 3446666766 79999999999999999999986443 222 2243 466699999999999999999989999999
Q ss_pred Eehhh
Q 016705 227 TFKRL 231 (384)
Q Consensus 227 ~~~~~ 231 (384)
++.+.
T Consensus 146 ~lPK~ 150 (175)
T 2klr_A 146 NGPRK 150 (175)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98764
No 22
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=98.73 E-value=3e-08 Score=86.02 Aligned_cols=80 Identities=16% Similarity=0.213 Sum_probs=61.7
Q ss_pred ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcc----ee-eeccccceEeeCCCccCcceeeEEEeccee
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTS----VK-QYHGNNFRSFLFPDGVDPFGFSTSMDDAGV 223 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~----~k-~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~ 223 (384)
..+.|++.| ||++.|||.|.++.|.+.|+|.+.......+.. .+ .| +.|.|+|.+|+.||+=.++|++. |||
T Consensus 66 ~~~~v~~dl-PG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~-g~f~R~~~LP~~vd~~~i~A~~~-nGv 142 (161)
T 4eld_A 66 QHIKVIAWL-PGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEE-EEIYRTIKLPATVKEENASAKFE-NGV 142 (161)
T ss_dssp SEEEEEEEC-TTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCC-CEEEEEEECSSCBCGGGCEEEEE-TTE
T ss_pred CEEEEEEEC-CCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeecc-ccEEEEEECCCCcccccEEEEEE-CCE
Confidence 357777777 999999999999999999999744321111111 11 12 56779999999999999999995 899
Q ss_pred EEEEehhh
Q 016705 224 LTLTFKRL 231 (384)
Q Consensus 224 ~~~~~~~~ 231 (384)
|++++.+.
T Consensus 143 L~I~lpK~ 150 (161)
T 4eld_A 143 LSVILPKA 150 (161)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEcC
Confidence 99998764
No 23
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.60 E-value=1.4e-07 Score=78.44 Aligned_cols=75 Identities=19% Similarity=0.133 Sum_probs=59.8
Q ss_pred ceEEEEEeecccCCccceEEEEeC-CeEEEEeeeeeeeccCCcceeeecc-----ccceEeeCCCccCccee-eEEEecc
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIER-GKYLIVGMLQKKEQEGDTSVKQYHG-----NNFRSFLFPDGVDPFGF-STSMDDA 221 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~-~~~~v~g~~~k~~~~~~~~~k~~h~-----~~~~sy~~p~~vdp~~~-~~~~~d~ 221 (384)
..+.+++.| ||+++|||.|.++. |.+.|+|.+.. +. ..+||. .|.|+|.+|+.||+=.+ +|++. |
T Consensus 34 ~~~~v~~~l-PG~~~edi~V~v~~~~~L~I~g~~~~-~~-----~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~-~ 105 (123)
T 3aab_A 34 GYLVVVADL-AGFNKEKIKARVSGQNELIIEAEREI-TE-----PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYE-N 105 (123)
T ss_dssp TEEEEEEEC-CSCCGGGCEEEEETTTEEEEEEECCC-CC-----CSCEEEECSCSEEEEEEECSSEECTTCCCEEEEE-T
T ss_pred CEEEEEEEC-CCCCHHHEEEEEeCCCEEEEEEEEec-cC-----CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEc-C
Confidence 346666666 79999999999999 99999997433 21 122333 67799999999999999 99995 8
Q ss_pred eeEEEEehhh
Q 016705 222 GVLTLTFKRL 231 (384)
Q Consensus 222 ~~~~~~~~~~ 231 (384)
|||++++.+.
T Consensus 106 GvL~I~lPK~ 115 (123)
T 3aab_A 106 GVLTIRIPIA 115 (123)
T ss_dssp TEEEEEEEGG
T ss_pred CEEEEEEEcC
Confidence 9999998764
No 24
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=98.60 E-value=1.5e-07 Score=81.36 Aligned_cols=80 Identities=24% Similarity=0.374 Sum_probs=61.9
Q ss_pred ceEEEEEeecccCCccceEEEE-eCCeEEEEeeeeeeeccCCcceeeec------cccceEeeCCCccCcceeeEEEecc
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVI-ERGKYLIVGMLQKKEQEGDTSVKQYH------GNNFRSFLFPDGVDPFGFSTSMDDA 221 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v-~~~~~~v~g~~~k~~~~~~~~~k~~h------~~~~~sy~~p~~vdp~~~~~~~~d~ 221 (384)
..+.|++.| ||++.|||.|.+ +.|.+.|+|.......+.+ ..|| +.|.|+|.+|+.||+=.++|++ .|
T Consensus 53 d~~~v~~dl-PGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~---~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~n 127 (151)
T 1gme_A 53 EAHVFKADL-PGVKKEEVKVEVEDGNVLVVSGERTKEKEDKN---DKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL-EN 127 (151)
T ss_dssp SEEEEEEEC-TTCCGGGEEEEEETTTEEEEEECCCCCCCCTT---CEEEECCCCCCCEEEEEECSSCCCGGGCEEEE-ET
T ss_pred CEEEEEEEC-CCCChHHEEEEEecCCEEEEEEEEccccccCC---ceEEEEeEeccEEEEEEECCCCccccceEEEE-EC
Confidence 346666666 799999999999 5789999997444322211 2243 6788999999999999999999 68
Q ss_pred eeEEEEehhhcc
Q 016705 222 GVLTLTFKRLMP 233 (384)
Q Consensus 222 ~~~~~~~~~~~~ 233 (384)
|||++++.+.-+
T Consensus 128 GvL~I~lPK~~~ 139 (151)
T 1gme_A 128 GVLTVTVPKAEV 139 (151)
T ss_dssp TEEEEEEECCCC
T ss_pred CEEEEEEEccCc
Confidence 999999977543
No 25
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.00061 Score=58.33 Aligned_cols=84 Identities=14% Similarity=0.242 Sum_probs=70.2
Q ss_pred cCCCCCCeeeEEEeCCeEEEEEeccCCCCC--CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhcccccccc
Q 016705 6 DRKKPDPVSAIWEEDERSVHFKVFLASGMK--QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEAR 83 (384)
Q Consensus 6 dR~~~~P~VDV~ETDDeyII~A~FDLPGVk--KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEar 83 (384)
|.+-.+|.+.+.++++..+|.+ .+|-++ ..++++.|+++.......
T Consensus 12 ~~~~iTP~F~itQDdefv~I~I--~~p~ir~~a~~~ei~vd~~~F~F~~~------------------------------ 59 (115)
T 3eud_A 12 DDKMITPRFSITQDEEFIFLKI--FISNIRFSAVGLEIIIQENMIIFHLS------------------------------ 59 (115)
T ss_dssp --CCBCCCEEEEECSSEEEEEE--ECCSCCCCSSSCEEEEETTEEEEEET------------------------------
T ss_pred CCCEeCCcEEEEECCCEEEEEE--EcCceecccCccEEEEeCCEEEEecC------------------------------
Confidence 3446789999999999999888 999877 789999999998887641
Q ss_pred CceEEeecccceEEEEEECCCCc-ccCcceEEee-cCcEEEEEEeecCCCC
Q 016705 84 DTSSLNRPNDGKIEMNFSLPVGV-DPDGFSTSMD-DAGVLTLTFKRQRAFD 132 (384)
Q Consensus 84 d~~~~rERs~GsFsRsI~LPe~V-D~dkIkAsLe-NdGVLTITLPK~epe~ 132 (384)
.|.-++.||..+ |.++-+|+|+ ++|.++|++||..+-+
T Consensus 60 -----------PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 60 -----------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp -----------TEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESSTTC
T ss_pred -----------CeEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 377789999997 7788899998 3499999999998754
No 26
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0001 Score=64.44 Aligned_cols=79 Identities=13% Similarity=0.220 Sum_probs=68.4
Q ss_pred CCCeeeEEEeCCeEEEEEeccCCCCC--CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705 10 PDPVSAIWEEDERSVHFKVFLASGMK--QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS 87 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLPGVk--KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~ 87 (384)
.+|++.+.++++..+|.+ .+|.++ ..+++|.|++..+.....
T Consensus 2 iTP~F~itQd~e~viV~I--k~P~~~~~~sdiei~v~~~~F~F~~~---------------------------------- 45 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKI--FISNIRFSAVGLEIIIQENMIIFHLS---------------------------------- 45 (134)
T ss_dssp CCSEEEEEECSSEEEEEE--ECCSSCCCSSSCCCEECSSSEEECSS----------------------------------
T ss_pred cCceEEEEECCCEEEEEE--EcCccccCccccEEEEeCCEEEEecC----------------------------------
Confidence 479999999999999999 999999 899999999888877421
Q ss_pred EeecccceEEEEEECCCCc-ccCcceEEee-cCcEEEEEEeecCCC
Q 016705 88 LNRPNDGKIEMNFSLPVGV-DPDGFSTSMD-DAGVLTLTFKRQRAF 131 (384)
Q Consensus 88 ~rERs~GsFsRsI~LPe~V-D~dkIkAsLe-NdGVLTITLPK~epe 131 (384)
.|.-++.||..| |.+..+|+|. +.|.|+|++||..+-
T Consensus 46 -------PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 46 -------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp -------SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESSTT
T ss_pred -------CeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCCCC
Confidence 356679999998 9999999998 349999999999875
No 27
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.25 E-value=0.0029 Score=52.86 Aligned_cols=82 Identities=10% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCeeeEEEeCCeEEEEEeccCCCC---CCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705 11 DPVSAIWEEDERSVHFKVFLASGM---KQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS 87 (384)
Q Consensus 11 ~P~VDV~ETDDeyII~A~FDLPGV---kKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~ 87 (384)
.++++++++.+...|.+ .+||+ .++++.|+++++.|.|+.... .+
T Consensus 20 ~~~y~W~Qt~~~V~i~I--~l~~~~~~~~~~v~V~~~~~~l~v~~~~~------~~------------------------ 67 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYI--TLTGVHQVPTENVQVHFTERSFDLLVKNL------NG------------------------ 67 (127)
T ss_dssp CCSCEEEEETTEEEEEE--ECTTTTTSCTTSEEEEECSSEEEEEECSC------SS------------------------
T ss_pred ccEEEEEcCCCEEEEEE--EeCCCCcCCccccEEEEEcCEEEEEEEcC------CC------------------------
Confidence 56899999999999888 99999 899999999999999986310 00
Q ss_pred EeecccceEEEEEE-CCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705 88 LNRPNDGKIEMNFS-LPVGVDPDGFSTSMDDAGVLTLTFKRQRAF 131 (384)
Q Consensus 88 ~rERs~GsFsRsI~-LPe~VD~dkIkAsLeNdGVLTITLPK~epe 131 (384)
..|.-.+. |-..|++++-+.++.. +-+.|+|-|..+.
T Consensus 68 ------~~y~~~~~~L~~~I~~e~S~~~v~~-~kVei~L~K~~~~ 105 (127)
T 1x5m_A 68 ------KSYSMIVNNLLKPISVEGSSKKVKT-DTVLILCRKKVEN 105 (127)
T ss_dssp ------SCEEEEEECBSSCCCTTTCEEEEET-TEEEEEEECSSSS
T ss_pred ------CcEEEEhHHhcCccCcccCEEEEeC-CEEEEEEEECCCC
Confidence 04777785 9999999999999999 9999999998764
No 28
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.16 E-value=0.002 Score=55.32 Aligned_cols=94 Identities=9% Similarity=0.253 Sum_probs=72.2
Q ss_pred CCeeeEEEe-CCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705 11 DPVSAIWEE-DERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN 89 (384)
Q Consensus 11 ~P~VDV~ET-DDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r 89 (384)
.|++|++++ .+...|++ .++++.+++++|++.++.|.|+..-.... .+..
T Consensus 19 ~~r~~W~Qt~~~~V~vtI--~~k~v~~~~v~V~f~~~~l~v~~~~~~~~----------------~l~~----------- 69 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHV--YVKEICRDTSRVLFREQDFTLIFQTRDGN----------------FLRL----------- 69 (134)
T ss_dssp CCCEEEEEETTTEEEEEE--ECCSBCTTSCEEEECSSEEEEEECBCCHH----------------HHHH-----------
T ss_pred CCCeEEEcCCCCEEEEEE--EeCCCCcccCEEEEECCEEEEEEEcCCCc----------------cccc-----------
Confidence 588999999 99988877 99999999999999999999986431100 0000
Q ss_pred ecccc---eEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcc
Q 016705 90 RPNDG---KIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLR 134 (384)
Q Consensus 90 ERs~G---sFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~R 134 (384)
-...| .|.-.+.|-..|++++-+.++.. .-+.|+|.|.......
T Consensus 70 ~~a~g~~~~y~~~~~L~~~I~pe~S~~~v~~-~kIeI~L~K~e~~~W~ 116 (134)
T 1wh0_A 70 HPGCGPHTTFRWQVKLRNLIEPEQCTFCFTA-SRIDICLRKRQSQRWG 116 (134)
T ss_dssp STTCCTTSCEEEEEEBSSCEEEEEEEEEECS-SEEEEEEEESSSCCCS
T ss_pred ccccCcceeEEEeccccccCCchhCEEEEeC-CEEEEEEEECCCCccc
Confidence 00001 57778899999999999999999 9999999998765443
No 29
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.94 E-value=0.0034 Score=52.43 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=67.3
Q ss_pred CC-eeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705 11 DP-VSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN 89 (384)
Q Consensus 11 ~P-~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r 89 (384)
.| .++++++.+...|++ .+|+. ++++|+++.+.|.+++... ..+
T Consensus 2 ~P~~~~W~Qt~~~V~ltI--~~~~~--~~~~V~~~~~~l~~~~~~~-----~~~-------------------------- 46 (125)
T 1ejf_A 2 QPASAKWYDRRDYVFIEF--CVEDS--KDVNVNFEKSKLTFSCLGG-----SDN-------------------------- 46 (125)
T ss_dssp BCCCEEEEECSSEEEEEE--CCTTE--EEEEEEEETTEEEEEEEET-----TTT--------------------------
T ss_pred CCCceeEEeCCCEEEEEE--EecCC--CceEEEEECCEEEEEEEeC-----CCC--------------------------
Confidence 46 899999999998888 99996 6999999999999987531 011
Q ss_pred ecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCC
Q 016705 90 RPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA 130 (384)
Q Consensus 90 ERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~ep 130 (384)
..|.-.+.|-..|++++.+.++.+ .-+.|+|.|..+
T Consensus 47 ----~~y~~~l~L~~~I~~e~S~~~v~~-~kiei~L~K~~~ 82 (125)
T 1ejf_A 47 ----FKHLNEIDLFHCIDPNDSKHKRTD-RSILCCLRKGES 82 (125)
T ss_dssp ----EEEEEEEEBSSCEEEEEEEEEECS-SCEEEEEEESST
T ss_pred ----ceEEEEEEccceeccccCEEEECC-CEEEEEEEECCC
Confidence 047888899999999999999998 899999999875
No 30
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.68 E-value=0.01 Score=49.41 Aligned_cols=87 Identities=7% Similarity=0.059 Sum_probs=69.0
Q ss_pred CCCeeeEEEeCCeEEEEEeccCC-CC-CCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705 10 PDPVSAIWEEDERSVHFKVFLAS-GM-KQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS 87 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLP-GV-kKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~ 87 (384)
..|.+.++++.++..|++ .|| |+ +++||+|++..+.|.|..... .+
T Consensus 18 ~~~~y~W~Qt~~~V~i~I--~lp~~~~~~kdv~V~i~~~~l~v~~~~~------~~------------------------ 65 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRV--PVPKHVVKGKQVSVALSSSSIRVAMLEE------NG------------------------ 65 (124)
T ss_dssp CCSSCEEEEETTEEEEEE--ECCTTCCSGGGEEEEECSSEEEEEEECS------SS------------------------
T ss_pred cCCcEEEEEcccEEEEEE--EcCCCCCchhheEEEEEcCEEEEEEEcc------CC------------------------
Confidence 468899999999999887 999 88 899999999999999986420 01
Q ss_pred EeecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCCCCcce
Q 016705 88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRAFDLRN 135 (384)
Q Consensus 88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~epe~~Rr 135 (384)
. .+.-...|...|+++.-+-++++ + .|.|+|-|.......+
T Consensus 66 -~-----~~~~~~~L~~~I~~e~S~w~i~~-~k~v~i~L~K~~~~~W~~ 107 (124)
T 1wgv_A 66 -E-----RVLMEGKLTHKINTESSLWSLEP-GKCVLVNLSKVGEYWWNA 107 (124)
T ss_dssp -E-----EEEEEEEBSSCBCTTTCEEEECT-TSEEEEEECBSSSCCCSC
T ss_pred -C-----ceEEcccccCcCCCcCCEEEEeC-CCEEEEEEEECCCCCCcC
Confidence 0 23345789999999999999998 7 5999999986543333
No 31
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=96.59 E-value=0.0044 Score=60.71 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=53.3
Q ss_pred eEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEEEEE
Q 016705 22 RSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFS 101 (384)
Q Consensus 22 eyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsRsI~ 101 (384)
.|.+++ .|||++|++|++.-.++.|+|+. |.|+|.|.
T Consensus 306 ~~~~~l--~lP~~~~~~~~l~~~gdeL~v~~-----------------------------------------g~~rR~i~ 342 (374)
T 3igf_A 306 NRQVRL--FLPGFDKKQVKLTQYGPEVTVEA-----------------------------------------GDQRRNIF 342 (374)
T ss_dssp TTEEEE--ECTTCCGGGCEEEEETTEEEEEE-----------------------------------------TTEEEEEE
T ss_pred cEEEEE--ECCCCCHHHeEEEEECCeEEEEE-----------------------------------------CCEeeccc
Confidence 788888 99999999999999999999975 36999999
Q ss_pred CCCCcccC-cceEEeecCcEEEEEEee
Q 016705 102 LPVGVDPD-GFSTSMDDAGVLTLTFKR 127 (384)
Q Consensus 102 LPe~VD~d-kIkAsLeNdGVLTITLPK 127 (384)
||....-- -..|.|+| |.|+|++-.
T Consensus 343 LP~~L~~~~v~~A~~~~-~~L~i~~~~ 368 (374)
T 3igf_A 343 LPPALSGRPITGAKFQN-NYLIISFLE 368 (374)
T ss_dssp CCTTTTTCCEEEEEEET-TEEEEEECC
T ss_pred CCHHHcCCCccccEEEC-CEEEEEEeh
Confidence 99875433 45799999 999999754
No 32
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.28 E-value=0.029 Score=46.93 Aligned_cols=79 Identities=19% Similarity=0.116 Sum_probs=64.6
Q ss_pred CCCeeeEEEeCCeEEEEEeccCC-C--CCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705 10 PDPVSAIWEEDERSVHFKVFLAS-G--MKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS 86 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLP-G--VkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~ 86 (384)
..|.+.++++.++..|++ .|| | +++.|++|++..+.|.|... ...
T Consensus 6 ~~~~y~W~Qt~~~V~i~I--~lp~~~~~~~kdv~V~i~~~~l~v~~k------g~~------------------------ 53 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAV--PFRVSFRLKGKDVVVDIQRRHLRVGLK------GQP------------------------ 53 (131)
T ss_dssp SCCSSEEEECSSEEEEEE--CCCCSSCCCTTSEEEEEETTEEEEEET------TSC------------------------
T ss_pred CCCcEEEEecCCEEEEEE--ECCCCCcccccceEEEEeCCEEEEEEC------Cce------------------------
Confidence 568899999999998877 999 7 89999999999999999752 000
Q ss_pred EEeecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCC
Q 016705 87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRA 130 (384)
Q Consensus 87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~ep 130 (384)
+.-...|...|+++.-+-++++ | .|.|+|-|..+
T Consensus 54 ---------~~~~~~L~~~I~~e~s~w~i~~-~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 54 ---------PVVDGELYNEVKVEESSWLIED-GKVVTVHLEKINK 88 (131)
T ss_dssp ---------CSBCSCBSSCBCSTTCEEEEET-TTEEEEEEEBSSS
T ss_pred ---------EEEecccccccccccCEEEEcC-CCEEEEEEEECCC
Confidence 0012357789999999999999 8 89999999876
No 33
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.15 E-value=0.03 Score=47.00 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=62.2
Q ss_pred CCCeeeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 10 PDPVSAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
..|.++++++.+...|++ .|| |++++|++|.+..+.|.|... +
T Consensus 3 ~~~~y~W~Qt~~~V~i~I--~lp~~~~~kdv~V~i~~~~l~v~~~---------g------------------------- 46 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQF--PVTGDADSSAIKIRMVGKKICVKNQ---------G------------------------- 46 (131)
T ss_dssp --CCCEEEEETTEEEEEE--ECC---CCSCEEEEEETTEEEEEET---------T-------------------------
T ss_pred CCCcEEEEecCCEEEEEE--ECCCCCCccceEEEEECCEEEEEEC---------C-------------------------
Confidence 468899999999999887 996 999999999999999999751 1
Q ss_pred eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecC
Q 016705 89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQR 129 (384)
Q Consensus 89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~e 129 (384)
. . .-...|...|+++.-+-++.+ +-|.|+|-|..
T Consensus 47 ~-----~-~~~~~L~~~I~~e~S~w~i~~-~kv~i~L~K~~ 80 (131)
T 2o30_A 47 E-----I-VIDGELLHEVDVSSLWWVING-DVVDVNVTKKR 80 (131)
T ss_dssp E-----E-EEEEEBSSCEEEEEEEEEEET-TEEEEEEEESS
T ss_pred E-----e-eEccccccccccccCEEEEeC-CEEEEEEEECC
Confidence 0 1 234578899999999999999 88999999983
No 34
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=95.97 E-value=0.047 Score=45.45 Aligned_cols=79 Identities=18% Similarity=0.093 Sum_probs=64.7
Q ss_pred CCCeeeEEEeCCeEEEEEeccCC-C--CCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705 10 PDPVSAIWEEDERSVHFKVFLAS-G--MKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS 86 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLP-G--VkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~ 86 (384)
..|.+.++++.++..|++ .|| | ++..||.|++..+.|.|..+- .+
T Consensus 15 ~~~~y~W~Qt~~eV~v~V--~lp~~~~~~~kdv~V~i~~~~l~v~~kg------~~------------------------ 62 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAV--PFCVNFRLKGKDMVVDIQRRHLRVGLKG------QP------------------------ 62 (121)
T ss_dssp BCSSCEEEECSSEEEEEE--ECCCSSCCCGGGEEEEEETTEEEEEETT------SC------------------------
T ss_pred cCCCEEEEEccceEEEEE--ECCCCCcccccceEEEEEcCEEEEEEcC------cc------------------------
Confidence 468899999999998877 999 4 789999999999999886420 00
Q ss_pred EEeecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCC
Q 016705 87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRA 130 (384)
Q Consensus 87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~ep 130 (384)
+.-...|...|+++...-++++ | .|.|+|-|...
T Consensus 63 ---------~~~~g~L~~~I~~deS~w~i~~-~~~i~i~L~K~~~ 97 (121)
T 3qor_A 63 ---------AIIDGELYNEVKVEESSWLIAD-GAVVTVHLEKINK 97 (121)
T ss_dssp ---------CSEEEEBSSCBCGGGCEEEEET-TTEEEEEEEBSSS
T ss_pred ---------eEEeccccccccccccEEEEcC-CCEEEEEEEECCC
Confidence 1124578899999999999999 8 99999999865
No 35
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=95.93 E-value=0.014 Score=50.76 Aligned_cols=82 Identities=6% Similarity=0.117 Sum_probs=67.0
Q ss_pred CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEE-CCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQ-DGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVd-ddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
..|+++++++.+.+.|++ .+|++ ++++|+++ .+.|.+++. . . .+
T Consensus 3 ~~P~~~W~Qt~~~V~ltI--~l~~~--~~v~V~~~~~~~l~~~~~---~-~--~~------------------------- 47 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTV--ALPDA--KDISVKCEPQGLFSFSAL---G-A--QG------------------------- 47 (150)
T ss_dssp ECCCEEEEECSSEEEEEE--CCSSE--EEEEECCCTTEEEEEEEE---T-T--TT-------------------------
T ss_pred cCCcEEEEeCCCEEEEEE--EeCCC--CceEEEEecCCEEEEEEE---c-C--CC-------------------------
Confidence 368999999999988877 99998 47999999 789999985 1 1 11
Q ss_pred eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCc
Q 016705 89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDL 133 (384)
Q Consensus 89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~ 133 (384)
..|.-.+.|-..|+++ .+.+... .-+.|+|.|..+...
T Consensus 48 -----~~y~~~l~L~~~Idpe-S~~~v~~-~kIei~L~K~e~~~W 85 (150)
T 2kmw_A 48 -----ERFEFSLELYGKIMTE-YRKNVGL-RNIIFSIQKEERSWW 85 (150)
T ss_dssp -----EEEEEEEEBSSCEEEE-EEEEEES-SSEEEEEEECCSSCC
T ss_pred -----ceEEEEeEhhhccccc-ceEEecC-CEEEEEEEECCCCcC
Confidence 1578888999999999 8899888 889999999875433
No 36
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.0033 Score=53.52 Aligned_cols=87 Identities=8% Similarity=0.095 Sum_probs=59.6
Q ss_pred CCCCeeeEEEeCCe-------EEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhcccccc
Q 016705 9 KPDPVSAIWEEDER-------SVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEE 81 (384)
Q Consensus 9 ~~~P~VDV~ETDDe-------yII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneE 81 (384)
...|.++++++.+. +.|++ .+|++. +++|+++.+.|.+++.........+.
T Consensus 4 ~~~p~~~W~Q~~~~~~~~k~~V~ltI--~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~~~~------------------ 61 (134)
T 2cg9_X 4 VINPQVAWAQRSSTTDPERNYVLITV--SIADCD--APELTIKPSYIELKAQSKPHVGDENV------------------ 61 (134)
T ss_dssp -------CBCCCEEECCCSSEEEEEC--CCSSEE--SCCCCBCSSEEEECCEEC-------C------------------
T ss_pred ccCCCEEEEeCCCCcCCcCCEEEEEE--EecCCC--ceEEEEECCEEEEEEecccccCCccC------------------
Confidence 45799999999876 66655 999984 89999999999998653110000000
Q ss_pred ccCceEEeecccceEEEEEECCCCcccCcceEEeecCcE-EEEEEeecCC
Q 016705 82 ARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGV-LTLTFKRQRA 130 (384)
Q Consensus 82 ard~~~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGV-LTITLPK~ep 130 (384)
..|.-.+.|...|++++.+.++.+ +. +.|+|.|..+
T Consensus 62 ------------~~y~~~l~L~~~Idpe~S~~~v~~-~~~vei~L~K~~~ 98 (134)
T 2cg9_X 62 ------------HHYQLHIDLYKEIIPEKTMHKVAN-GQHYFLKLYKKDL 98 (134)
T ss_dssp ------------EEBCEEEECSSCCCSSSEEEEECC-C--CEEEEEECSS
T ss_pred ------------ceEEEEEEChhhccccccEEEECC-CEEEEEEEEECCC
Confidence 147778899999999999999999 88 9999999874
No 37
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.53 E-value=0.13 Score=44.84 Aligned_cols=85 Identities=9% Similarity=0.112 Sum_probs=68.7
Q ss_pred CCCeeeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705 10 PDPVSAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL 88 (384)
Q Consensus 10 ~~P~VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~ 88 (384)
..|.+.++++.++..|++ .|| |++..||.|.+..+.|.|+.+ +
T Consensus 12 ~~~~y~W~Qt~~eV~v~I--~lp~~~~~kdv~V~i~~~~L~v~~k---------g------------------------- 55 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEV--QVPPGTRAQDIQCGLQSRHVALAVG---------G------------------------- 55 (157)
T ss_dssp ECSSEEEEECSSEEEEEE--ECCTTCCGGGEEEEECSSEEEEEET---------T-------------------------
T ss_pred CCCcEEEEecCCEEEEEE--ECCCCCcccceEEEEecCEEEEEEC---------C-------------------------
Confidence 468899999999999887 998 899999999999999999752 1
Q ss_pred eecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCC---CCcceEE
Q 016705 89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRA---FDLRNVA 137 (384)
Q Consensus 89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~ep---e~~RrIa 137 (384)
. . .-...|...|+++.-+-++++ + +|.|+|-|..+ ....++-
T Consensus 56 ~-----~-~l~g~L~~~I~~eeS~w~i~~-~k~v~I~L~K~~~~~~~~W~~L~ 101 (157)
T 2rh0_A 56 R-----E-ILKGKLFDSTIADEGTWTLED-RKMVRIVLTKTKRDAANCWTSLL 101 (157)
T ss_dssp E-----E-EEEEEBSSCBCGGGCEEEEEC-CCEEEEEEEBSSCSTTCCCSEEE
T ss_pred E-----E-EEeeccccccCccccEEEEcC-CcEEEEEEEEcCCCcCCcChhhh
Confidence 0 1 134678999999999999998 6 59999999876 3444444
No 38
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=90.21 E-value=1.2 Score=34.05 Aligned_cols=69 Identities=7% Similarity=0.037 Sum_probs=52.1
Q ss_pred ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF 228 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~ 228 (384)
..+.|.+++ |+.+.+|+.|.++.+.+.|++.. ...+.| .....++..|||=.-+..+.+ +.+.+++
T Consensus 12 ~~V~v~i~~-~~v~~~~v~v~~~~~~l~v~~~~--------~~~~~y----~~~~~L~~~I~~~~s~~~~~~-~~l~i~L 77 (92)
T 2xcm_C 12 EEVVVTVFA-KGIPKQNVNIDFGEQILSVVIEV--------PGEDAY----YLQPRLFGKIIPDKCKYEVLS-TKIEICL 77 (92)
T ss_dssp TEEEEEEEC-CSCCGGGEEEEECSSBEEEEECC--------TTSCCE----EECCBBSSCBCGGGCEEEECS-SCEEEEE
T ss_pred CEEEEEEEE-CCCChHHeEEEEECCEEEEEEEc--------CCCcEE----EEeeEcCCccCchhEEEEEEC-CEEEEEE
Confidence 357788886 68889999999999999999852 111223 356789999999888888876 5577877
Q ss_pred hhh
Q 016705 229 KRL 231 (384)
Q Consensus 229 ~~~ 231 (384)
+..
T Consensus 78 ~K~ 80 (92)
T 2xcm_C 78 AKA 80 (92)
T ss_dssp EBS
T ss_pred EcC
Confidence 653
No 39
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=87.06 E-value=2.1 Score=34.26 Aligned_cols=69 Identities=10% Similarity=0.027 Sum_probs=52.7
Q ss_pred ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF 228 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~ 228 (384)
..|.|.+++. +.+.+|+.|.++.+.+.|++... ..+ ++...+.++..|||=.-++.+.+ +.+.+++
T Consensus 19 ~~V~v~i~l~-~v~~~~v~v~~~~~~l~v~~~~~--------~~~----~y~~~~~L~~~I~~e~s~~~~~~-~~l~i~L 84 (114)
T 1rl1_A 19 SQVVITLMIK-NVQKNDVNVEFSEKELSALVKLP--------SGE----DYNLKLELLHPIIPEQSTFKVLS-TKIEIKL 84 (114)
T ss_dssp SEEEEEECCC-SCCGGGEEEECSSSCEEEEEECT--------TSS----EEEEEECBSSCCCGGGEEEEECS-SSEEEEE
T ss_pred CEEEEEEEeC-CCCHHHCEEEEEcCEEEEEEEeC--------CCc----EEEEEeeCCCcCCccccEEEEEC-CEEEEEE
Confidence 3588888885 88899999999999999998521 111 23467899999999888888877 5678887
Q ss_pred hhh
Q 016705 229 KRL 231 (384)
Q Consensus 229 ~~~ 231 (384)
+..
T Consensus 85 ~K~ 87 (114)
T 1rl1_A 85 KKP 87 (114)
T ss_dssp ECS
T ss_pred EcC
Confidence 653
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=84.17 E-value=2.8 Score=38.87 Aligned_cols=114 Identities=16% Similarity=0.218 Sum_probs=68.9
Q ss_pred CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEEEEECCCCcccCcceEEe
Q 016705 36 QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSM 115 (384)
Q Consensus 36 KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsRsI~LPe~VD~dkIkAsL 115 (384)
|+.|+|+++++.++|+|.+ |+.+|.| +.. |+...
T Consensus 39 P~gV~V~i~~~~VtVKGPk---------------------------------------G~L~~~~--~~~-----v~i~~ 72 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK---------------------------------------GELTVPY--NTE-----LTVRQ 72 (212)
T ss_pred CCCcEEEEeCCEEEEECCC---------------------------------------EEEEEEC--CCC-----eEEEE
Confidence 6888999999999999843 2444444 333 44556
Q ss_pred ecCcEEEEEEeecCCCC----------------------cceEEeccccccCCCCce-EEEEEeecccCC-------ccc
Q 016705 116 DDAGVLTLTFKRQRAFD----------------------LRNVAMGWEHAKDSKKGF-VDFKAYLAAGTK-------IED 165 (384)
Q Consensus 116 eNdGVLTITLPK~epe~----------------------~RrIaIg~~~~~~~~~g~-~~~~~~~~~~~k-------~ed 165 (384)
++ +.|+|+.+...... .+...+--.|+++...|. |.+ .=||+ ||+
T Consensus 73 e~-~~i~v~~~~~~k~~ra~~Gt~rslI~NMI~GVt~Gf~kkLelvGvGYra~~~G~~L~L----~LG~SHpv~~~iP~G 147 (212)
T 1nkw_E 73 DG-DQLLVERPSDAQKHRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALEM----NIGYSHPVIIEPPAG 147 (212)
T ss_pred EC-CEEEEEcCCCCHHHHHHHHHHHHHhhCEEEeeccCeEEEEEEeeeeeEEEcCCCEEEE----EccCCccEEEECCCC
Confidence 77 88888766542210 011111123445555665 443 22333 688
Q ss_pred eEEEEeCC-eEEEEeeeeeeeccCCcceeeeccccceEeeCCCc
Q 016705 166 LVVVIERG-KYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDG 208 (384)
Q Consensus 166 l~v~v~~~-~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~ 208 (384)
+.|.+.++ .++|+|. .| ..+-|+ +-+-|+|.-||-
T Consensus 148 I~v~v~~~t~Iiv~Gi-DK------q~VGq~-AA~IR~~R~PEP 183 (212)
T 1nkw_E 148 VTFAVPEPTRIDVSGI-DK------QLVGQV-AANVRKVRKPDA 183 (212)
T ss_pred eEEEeCCCCEEEEEeC-CH------HHHHHH-HHHHhccCCCCC
Confidence 99999876 9999996 22 233344 566788888873
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=77.19 E-value=2.4 Score=38.10 Aligned_cols=113 Identities=17% Similarity=0.288 Sum_probs=67.8
Q ss_pred CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEEEEECCCCcccCcceEEe
Q 016705 36 QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSM 115 (384)
Q Consensus 36 KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsRsI~LPe~VD~dkIkAsL 115 (384)
|+.|+|+++++.++|+|.+ |+.+|.| |.. ++...
T Consensus 11 P~gV~V~i~~~~VtVkGpk---------------------------------------G~L~~~~--~~~-----v~i~~ 44 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK---------------------------------------GELTRTF--HPD-----MTITV 44 (177)
T ss_dssp CTTCEEEEETTEEEEEETT---------------------------------------EEEEEEC--CTT-----CEEEE
T ss_pred CCCCEEEEeCCEEEEECCC---------------------------------------eEEEEEc--CCC-----EEEEE
Confidence 6788999999999999832 3455554 433 44566
Q ss_pred ecCcEEEEEEeecCCCC----------------------cceEEeccccccCCCCce-EEEEEeecccCC-------ccc
Q 016705 116 DDAGVLTLTFKRQRAFD----------------------LRNVAMGWEHAKDSKKGF-VDFKAYLAAGTK-------IED 165 (384)
Q Consensus 116 eNdGVLTITLPK~epe~----------------------~RrIaIg~~~~~~~~~g~-~~~~~~~~~~~k-------~ed 165 (384)
++ +.|+|+.|...... .+...+--.|+++...|. |.+ .=||+ |++
T Consensus 45 ~~-~~l~v~~~~~~k~~~a~~Gt~rsli~Nmi~GVt~Gf~~~L~lvGvGyra~~~G~~l~l----~LG~Shpv~~~iP~g 119 (177)
T 1rl6_A 45 EG-NVITVTRPSDEKHHRALHGTTRSLLANMVEGVSKGYEKALELVGVGYRASKQGKKLVL----SVGYSHPVEIEPEEG 119 (177)
T ss_dssp ET-TEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEESTTCEEEEETTEEEE----ESSSSSCEEECCCTT
T ss_pred eC-CEEEEEcCCCCHHHHHHHHHHHHHHhCEEEeEcCCcEEEEEEEeeceEEEecCCEEEE----EecCCccEEEeCCCC
Confidence 78 99888866542210 012222122344444454 443 33443 688
Q ss_pred eEEEEeCC-eEEEEeeeeeeeccCCcceeeeccccceEeeCCC
Q 016705 166 LVVVIERG-KYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPD 207 (384)
Q Consensus 166 l~v~v~~~-~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~ 207 (384)
+.|.+.++ +++|+|. .| ..+-|+ +-+-|+|.-||
T Consensus 120 i~v~v~~~t~I~v~G~-Dk------q~Vgq~-AA~Ir~~R~Pe 154 (177)
T 1rl6_A 120 LEIEVPSQTKIIVKGA-DK------QRVGEL-AANIRAVRPPE 154 (177)
T ss_dssp EEEEEEETTEEEEEES-CH------HHHHHH-HHHHHTTSCCC
T ss_pred cEEEECCCCEEEEEeC-CH------HHHHHH-HHHHhccCCCC
Confidence 98988876 9999996 22 223334 55567777776
No 42
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=66.50 E-value=25 Score=28.79 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=52.6
Q ss_pred eEEEEEECCCCc-ccCcceEEeecCcEEEEEEeecCCCCcceEEeccccccCCCCceEEEEEeecccCCccceEEEEeCC
Q 016705 95 KIEMNFSLPVGV-DPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERG 173 (384)
Q Consensus 95 sFsRsI~LPe~V-D~dkIkAsLeNdGVLTITLPK~epe~~RrIaIg~~~~~~~~~g~~~~~~~~~~~~k~edl~v~v~~~ 173 (384)
.-.-+|.||.++ +.++++..++. .-|+|.+.- .++....++..|-..-++|+-...++.+
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~------------------~~~~~~~~~~~L~~~I~~e~S~w~i~~~ 90 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLE------------------ENGERVLMEGKLTHKINTESSLWSLEPG 90 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEECS-SEEEEEEEC------------------SSSEEEEEEEEBSSCBCTTTCEEEECTT
T ss_pred EEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEc------------------cCCCceEEcccccCcCCCcCCEEEEeCC
Confidence 567789999988 99999999999 666655321 1233356778898999999999999999
Q ss_pred e-EEEEeeeeeee
Q 016705 174 K-YLIVGMLQKKE 185 (384)
Q Consensus 174 ~-~~v~g~~~k~~ 185 (384)
+ +.| .++|++
T Consensus 91 k~v~i--~L~K~~ 101 (124)
T 1wgv_A 91 KCVLV--NLSKVG 101 (124)
T ss_dssp SEEEE--EECBSS
T ss_pred CEEEE--EEEECC
Confidence 8 555 457753
No 43
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=65.27 E-value=3.7 Score=38.35 Aligned_cols=37 Identities=22% Similarity=0.455 Sum_probs=25.8
Q ss_pred ccceEEEEeCC-eEEEEeeeeeeeccCCcceeeeccccceEeeCCC
Q 016705 163 IEDLVVVIERG-KYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPD 207 (384)
Q Consensus 163 ~edl~v~v~~~-~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~ 207 (384)
||++.|.++.+ +++|+|. .| ..+-|+ +-+-|+|.-||
T Consensus 161 P~GI~v~v~~~t~Iii~Gi-DK------q~Vgq~-AA~IR~~R~PE 198 (223)
T 3bbo_I 161 PDSLKVKVEENTRITVSGY-DK------SEIGQF-AATVRKWRPPE 198 (223)
T ss_dssp CSSEEEECSSTTBCEEEES-SS------HHHHHH-HHHTTSSSCCC
T ss_pred CCCeEEEeCCCCEEEEEeC-CH------HHHHHH-HHHHhccCCCC
Confidence 68888988876 9999996 22 233334 55567777776
No 44
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=61.97 E-value=36 Score=29.37 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=49.2
Q ss_pred ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705 149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF 228 (384)
Q Consensus 149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~ 228 (384)
-.|.|.|+|.++.+..|+.|.+..+++.|+.+ +. . | -.-.+...|||=.-+-.+.++.++.++.
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k-------g~-~---~-----l~g~L~~~I~~eeS~w~i~~~k~v~I~L 86 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG-------GR-E---I-----LKGKLFDSTIADEGTWTLEDRKMVRIVL 86 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECSSEEEEEET-------TE-E---E-----EEEEBSSCBCGGGCEEEEECCCEEEEEE
T ss_pred CEEEEEEECCCCCcccceEEEEecCEEEEEEC-------CE-E---E-----EeeccccccCccccEEEEcCCcEEEEEE
Confidence 35888999999999999999999999998763 21 1 1 2345778888877777777776556665
Q ss_pred hh
Q 016705 229 KR 230 (384)
Q Consensus 229 ~~ 230 (384)
+.
T Consensus 87 ~K 88 (157)
T 2rh0_A 87 TK 88 (157)
T ss_dssp EB
T ss_pred EE
Confidence 44
No 45
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=60.11 E-value=53 Score=26.87 Aligned_cols=67 Identities=19% Similarity=0.138 Sum_probs=48.6
Q ss_pred ceEEEEEeeccc--CCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEE
Q 016705 149 GFVDFKAYLAAG--TKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTL 226 (384)
Q Consensus 149 g~~~~~~~~~~~--~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~ 226 (384)
..|.|.|+|.++ .+..|+.|.+..+++.|.-+ +.. + .-.-.+.+.|||=.-+-.+.++..+.+
T Consensus 26 ~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k-------g~~----~----~~~g~L~~~I~~deS~w~i~~~~~i~i 90 (121)
T 3qor_A 26 SELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK-------GQP----A----IIDGELYNEVKVEESSWLIADGAVVTV 90 (121)
T ss_dssp SEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET-------TSC----C----SEEEEBSSCBCGGGCEEEEETTTEEEE
T ss_pred ceEEEEEECCCCCcccccceEEEEEcCEEEEEEc-------Ccc----e----EEeccccccccccccEEEEcCCCEEEE
Confidence 358888999998 89999999999999888653 111 1 124467788999877777887655566
Q ss_pred Eehh
Q 016705 227 TFKR 230 (384)
Q Consensus 227 ~~~~ 230 (384)
+++.
T Consensus 91 ~L~K 94 (121)
T 3qor_A 91 HLEK 94 (121)
T ss_dssp EEEB
T ss_pred EEEE
Confidence 6544
No 46
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=59.86 E-value=34 Score=28.27 Aligned_cols=64 Identities=6% Similarity=0.042 Sum_probs=44.7
Q ss_pred eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705 150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK 229 (384)
Q Consensus 150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~ 229 (384)
.|.|.|+|.++.+.+|+.|.+..+.+.|+.+ |.. .-.-.+...|||=.-+-.+.++. +.++.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~-------g~~---------~~~~~L~~~I~~e~S~w~i~~~k-v~i~L~ 77 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKNQ-------GEI---------VIDGELLHEVDVSSLWWVINGDV-VDVNVT 77 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEET-------TEE---------EEEEEBSSCEEEEEEEEEEETTE-EEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEEC-------CEe---------eEccccccccccccCEEEEeCCE-EEEEEE
Confidence 4788899999999999999999999999863 211 12345677888877677777777 555554
Q ss_pred h
Q 016705 230 R 230 (384)
Q Consensus 230 ~ 230 (384)
.
T Consensus 78 K 78 (131)
T 2o30_A 78 K 78 (131)
T ss_dssp E
T ss_pred E
Confidence 3
No 47
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.88 E-value=41 Score=30.29 Aligned_cols=18 Identities=11% Similarity=0.390 Sum_probs=16.0
Q ss_pred ccceEEEEeCCeEEEEee
Q 016705 163 IEDLVVVIERGKYLIVGM 180 (384)
Q Consensus 163 ~edl~v~v~~~~~~v~g~ 180 (384)
|+++.|.+..++++|+|.
T Consensus 125 p~gv~v~v~~~~Iil~G~ 142 (184)
T 3j21_F 125 LPGVTVKVRGQEIIVEGI 142 (184)
T ss_dssp CTTEEEEEETTEEEEEES
T ss_pred CCCeEEEecCCEEEEEEC
Confidence 578889999999999996
No 48
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=50.16 E-value=56 Score=26.82 Aligned_cols=67 Identities=19% Similarity=0.140 Sum_probs=47.4
Q ss_pred eEEEEEeeccc--CCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEE
Q 016705 150 FVDFKAYLAAG--TKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLT 227 (384)
Q Consensus 150 ~~~~~~~~~~~--~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~ 227 (384)
.|.|.++|.++ .+.+|+.|.+..+++.|+.+ +.. + .-.-.+...|||=.-+-.+.++..+.++
T Consensus 18 ~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k-------g~~----~----~~~~~L~~~I~~e~s~w~i~~~k~v~i~ 82 (131)
T 1wfi_A 18 ELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK-------GQP----P----VVDGELYNEVKVEESSWLIEDGKVVTVH 82 (131)
T ss_dssp EEEEEECCCCSSCCCTTSEEEEEETTEEEEEET-------TSC----C----SBCSCBSSCBCSTTCEEEEETTTEEEEE
T ss_pred EEEEEEECCCCCcccccceEEEEeCCEEEEEEC-------Cce----E----EEecccccccccccCEEEEcCCCEEEEE
Confidence 47888999888 89999999999999999753 221 1 1123466778887666777776555666
Q ss_pred ehhh
Q 016705 228 FKRL 231 (384)
Q Consensus 228 ~~~~ 231 (384)
.+..
T Consensus 83 L~K~ 86 (131)
T 1wfi_A 83 LEKI 86 (131)
T ss_dssp EEBS
T ss_pred EEEC
Confidence 6543
No 49
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=49.14 E-value=49 Score=29.69 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=26.9
Q ss_pred ccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCc
Q 016705 163 IEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDP 211 (384)
Q Consensus 163 ~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp 211 (384)
|+++.|.+..++++|+|. .| ..+-|+ +-+-|+|.-|.+=|.
T Consensus 120 p~gi~v~v~~~~I~v~G~-Dk------q~Vgq~-AA~Ir~~r~pKGKGI 160 (178)
T 1vq8_E 120 HGDTDVEIDGEELTVSGP-DI------EAVGQT-AADIEQLTRINDKDV 160 (178)
T ss_dssp CTTCEEEEETTEEEEEES-CH------HHHHHH-HHHHHHTTCCSSSCT
T ss_pred CCCeEEEEeCCEEEEEEC-CH------HHHHHH-HHHHhccCCCCCCce
Confidence 678889999999999996 22 223233 444566666655444
No 50
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=30.88 E-value=24 Score=31.48 Aligned_cols=38 Identities=13% Similarity=0.267 Sum_probs=25.1
Q ss_pred ccceEEEEeC-CeEEEEeeeeeeeccCCcceeeeccccceEeeCCCc
Q 016705 163 IEDLVVVIER-GKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDG 208 (384)
Q Consensus 163 ~edl~v~v~~-~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~ 208 (384)
|+++.|.+.. +.++|+|. .| ..+-|+ +-+-|+|.-||-
T Consensus 117 p~gv~v~v~~~t~Iil~G~-Dk------e~Vgq~-AA~Ir~~R~Pep 155 (176)
T 3r8s_G 117 PAGITAECPTQTEIVLKGA-DK------QVIGQV-AADLRAYRRPEP 155 (176)
T ss_dssp CTTCEEEEEETTEEEEEES-CH------HHHHHH-HHHHHHTTCCCS
T ss_pred CCCeEEEECCCCEEEEEEC-cH------HHHHHH-HHHhhccCCCCC
Confidence 5788888866 58999996 22 223334 555677777763
No 51
>3fhw_A Primosomal replication protein N; PRIB BPR162 X-RAY NESG, structural genomics, PSI-2, protein initiative; 1.90A {Bordetella parapertussis} PDB: 3dm4_A 3klw_A
Probab=25.75 E-value=57 Score=27.20 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=26.8
Q ss_pred CCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcc
Q 016705 172 RGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPF 212 (384)
Q Consensus 172 ~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~ 212 (384)
..+|.|.|+++...+++. .. -.|++..+-+.=..+=|||
T Consensus 67 Gs~V~VeGrL~trs~~G~-kl-~l~a~~Ie~l~~~~~~~~~ 105 (115)
T 3fhw_A 67 GTEMQVQGFLAPARKDSV-KV-KLHLQQARRIAGSMGRDPL 105 (115)
T ss_dssp TCEEEEEEEEEESSTTCS-SE-EEEEEEEEECCCSCCC---
T ss_pred CCEEEEEEEEEECCCCCC-EE-EEEEEEEEEcCCCCCCCCc
Confidence 456789999998776652 22 3889988887777888887
No 52
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.02 E-value=2.9e+02 Score=22.40 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=50.6
Q ss_pred eEEEEEECCCCc---ccCcceEEeecCcEEEEEEeecCCCCcceEEeccccccCCCCceEEEEEe-ecccCCccceEEEE
Q 016705 95 KIEMNFSLPVGV---DPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAY-LAAGTKIEDLVVVI 170 (384)
Q Consensus 95 sFsRsI~LPe~V---D~dkIkAsLeNdGVLTITLPK~epe~~RrIaIg~~~~~~~~~g~~~~~~~-~~~~~k~edl~v~v 170 (384)
.-.-+|.|| ++ +.+++...++. .-|.|.+.-.. +-...+++. |-..-.+|+-.+.|
T Consensus 31 ~V~i~I~l~-~~~~~~~~~v~V~~~~-~~l~v~~~~~~------------------~~~y~~~~~~L~~~I~~e~S~~~v 90 (127)
T 1x5m_A 31 FVKIYITLT-GVHQVPTENVQVHFTE-RSFDLLVKNLN------------------GKSYSMIVNNLLKPISVEGSSKKV 90 (127)
T ss_dssp EEEEEEECT-TTTTSCTTSEEEEECS-SEEEEEECSCS------------------SSCEEEEEECBSSCCCTTTCEEEE
T ss_pred EEEEEEEeC-CCCcCCccccEEEEEc-CEEEEEEEcCC------------------CCcEEEEhHHhcCccCcccCEEEE
Confidence 456678888 44 78899999999 77777763211 112567774 88899999999999
Q ss_pred eCCeEEEEeeeeeee
Q 016705 171 ERGKYLIVGMLQKKE 185 (384)
Q Consensus 171 ~~~~~~v~g~~~k~~ 185 (384)
.+++|.| .+.|++
T Consensus 91 ~~~kVei--~L~K~~ 103 (127)
T 1x5m_A 91 KTDTVLI--LCRKKV 103 (127)
T ss_dssp ETTEEEE--EEECSS
T ss_pred eCCEEEE--EEEECC
Confidence 9999887 457754
Done!