Query         016714
Match_columns 384
No_of_seqs    308 out of 1925
Neff          10.2
Searched_HMMs 13730
Date          Mon Mar 25 18:13:52 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016714.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016714hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 1.1E-51 8.1E-56  397.4  27.7  364    7-372     1-373 (503)
  2 d1q1sc_ a.118.1.1 (C:) Importi 100.0 3.4E-35 2.5E-39  276.0  35.6  298   74-372    13-315 (434)
  3 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 2.2E-32 1.6E-36  262.1  30.5  304   74-381   119-433 (503)
  4 d1q1sc_ a.118.1.1 (C:) Importi 100.0 2.9E-30 2.1E-34  242.1  29.9  305   73-381    55-373 (434)
  5 d1jdha_ a.118.1.1 (A:) beta-Ca  99.9 1.1E-26 8.1E-31  223.4  21.3  290   74-372    17-309 (529)
  6 d1jdha_ a.118.1.1 (A:) beta-Ca  99.9 6.1E-26 4.5E-30  218.2  24.2  280   74-359    59-340 (529)
  7 d1xm9a1 a.118.1.24 (A:244-700)  99.9 1.7E-23 1.3E-27  194.9  25.6  280   75-358     3-449 (457)
  8 d1xm9a1 a.118.1.24 (A:244-700)  99.9 8.9E-22 6.5E-26  183.1  24.4  253  117-372     2-420 (457)
  9 d1xqra1 a.118.1.21 (A:87-350)   99.9 5.9E-22 4.3E-26  172.9  17.5  195  132-327    31-227 (264)
 10 d1xqra1 a.118.1.21 (A:87-350)   99.8 1.3E-20 9.3E-25  164.3  15.5  201  170-372    27-229 (264)
 11 d1oyza_ a.118.1.16 (A:) Hypoth  99.3 5.8E-10 4.2E-14   95.8  23.0  231   75-353    20-273 (276)
 12 d1b3ua_ a.118.1.2 (A:) Constan  99.3 7.9E-11 5.8E-15  113.0  18.9  267   75-358   282-548 (588)
 13 d2vglb_ a.118.1.10 (B:) Adapti  99.3 2.8E-10   2E-14  109.0  22.0  259   74-358    46-308 (579)
 14 d1b3ua_ a.118.1.2 (A:) Constan  99.2 2.8E-10 2.1E-14  109.1  21.2  265   75-358    88-353 (588)
 15 d2vglb_ a.118.1.10 (B:) Adapti  99.2 6.2E-11 4.5E-15  113.6  16.0  276   73-368    82-389 (579)
 16 d1oyza_ a.118.1.16 (A:) Hypoth  99.2 1.7E-09 1.2E-13   92.9  19.5  216  115-368    17-254 (276)
 17 d1qbkb_ a.118.1.1 (B:) Karyoph  99.1 1.1E-10   8E-15  117.7  13.4  286   77-368   398-788 (888)
 18 d1ibrb_ a.118.1.1 (B:) Importi  99.1 2.4E-09 1.8E-13   98.4  18.6  275   75-358   128-436 (458)
 19 d2vgla_ a.118.1.10 (A:) Adapti  99.1 2.1E-08 1.5E-12   95.8  25.6  265   75-368    67-398 (584)
 20 d1qbkb_ a.118.1.1 (B:) Karyoph  99.1 5.2E-10 3.8E-14  112.6  14.9  234  119-358   397-735 (888)
 21 d1u6gc_ a.118.1.2 (C:) Cullin-  99.1 6.6E-10 4.8E-14  115.3  14.7  271   76-359     5-282 (1207)
 22 d1ibrb_ a.118.1.1 (B:) Importi  98.9 7.8E-09 5.7E-13   94.8  12.5  235   76-316   173-437 (458)
 23 d2vgla_ a.118.1.10 (A:) Adapti  98.8 3.5E-07 2.6E-11   87.1  21.8  255   75-358   104-425 (584)
 24 d1ho8a_ a.118.1.9 (A:) Regulat  98.7 2.6E-07 1.9E-11   83.0  17.3  275   78-358   126-473 (477)
 25 d1qgra_ a.118.1.1 (A:) Importi  98.6 5.3E-07 3.9E-11   89.3  16.0  277   76-358   174-479 (876)
 26 d1u6gc_ a.118.1.2 (C:) Cullin-  98.5   2E-07 1.5E-11   96.2  13.0  233  118-358   131-400 (1207)
 27 d2bpta1 a.118.1.1 (A:1-861) Im  98.5 1.3E-06 9.4E-11   86.1  18.2  275   77-358    98-440 (861)
 28 d1te4a_ a.118.1.16 (A:) MTH187  98.5 1.7E-08 1.2E-12   74.0   2.3  109  169-311     1-109 (111)
 29 d1te4a_ a.118.1.16 (A:) MTH187  98.5 1.5E-08 1.1E-12   74.3   1.6  109  126-269     1-109 (111)
 30 d2bpta1 a.118.1.1 (A:1-861) Im  98.5 1.1E-05 8.4E-10   79.1  23.3  268   77-358     7-295 (861)
 31 d1qgra_ a.118.1.1 (A:) Importi  98.5   5E-06 3.6E-10   82.1  20.4  276   75-358   129-437 (876)
 32 d1ho8a_ a.118.1.9 (A:) Regulat  98.3 1.9E-05 1.4E-09   70.8  18.0  228   84-315   175-473 (477)
 33 d1upka_ a.118.1.15 (A:) Mo25 p  97.6  0.0013 9.3E-08   55.2  15.1  211  155-368    64-286 (330)
 34 d1upka_ a.118.1.15 (A:) Mo25 p  97.2   0.012 8.4E-07   49.3  17.1  242  112-358    64-323 (330)
 35 d1lrva_ a.118.1.5 (A:) Leucine  96.6   0.002 1.5E-07   52.4   7.0   41  125-184    50-90  (233)
 36 d2bnxa1 a.118.1.23 (A:133-475)  96.2   0.098 7.2E-06   44.8  16.2  157   78-236     6-186 (343)
 37 d1lrva_ a.118.1.5 (A:) Leucine  96.2  0.0018 1.3E-07   52.8   4.3   23  119-142    68-90  (233)
 38 d1wa5c_ a.118.1.1 (C:) Exporti  95.5   0.081 5.9E-06   51.7  14.0  287   74-369   496-803 (959)
 39 d1lsha1 a.118.4.1 (A:285-620)   95.3    0.69   5E-05   39.1  22.4  204  118-362    89-313 (336)
 40 d1wa5c_ a.118.1.1 (C:) Exporti  95.3    0.48 3.5E-05   46.0  19.0  178  132-314   472-669 (959)
 41 d1lsha1 a.118.4.1 (A:285-620)   94.8    0.99 7.2E-05   38.1  18.5  168  161-356    89-273 (336)
 42 d2bnxa1 a.118.1.23 (A:133-475)  92.4     2.7  0.0002   35.3  17.7  168  147-346    33-218 (343)
 43 d2jaka1 a.118.1.20 (A:30-372)   88.9     5.6 0.00041   33.2  17.3  190  156-353   129-321 (343)
 44 d2jaka1 a.118.1.20 (A:30-372)   77.9     4.5 0.00033   33.8   8.6   76  113-190   129-205 (343)
 45 d1dvpa1 a.118.9.2 (A:1-145) Hr  74.6       1 7.5E-05   32.7   3.2   74   74-147    42-115 (145)
 46 d1ujka_ a.118.9.2 (A:) ADP-rib  72.8     3.4 0.00025   29.8   5.7   73   74-147    45-123 (145)
 47 d1mhqa_ a.118.9.2 (A:) ADP-rib  71.5     2.8  0.0002   30.2   4.9   74   74-147    38-116 (143)
 48 d1dvpa1 a.118.9.2 (A:1-145) Hr  69.8     2.8 0.00021   30.2   4.6   73  161-233    43-116 (145)
 49 d2b6ca1 a.118.1.17 (A:3-215) H  69.4      21  0.0015   27.1  10.9  109  246-371    86-196 (213)
 50 d1ujka_ a.118.9.2 (A:) ADP-rib  61.2      24  0.0017   24.9   8.4   73  161-233    46-124 (145)
 51 d1mhqa_ a.118.9.2 (A:) ADP-rib  60.1      10 0.00076   26.9   6.1  114  253-375    14-139 (143)
 52 d1juqa_ a.118.9.2 (A:) ADP-rib  54.2     7.2 0.00052   28.2   4.4   74   74-147    39-117 (151)
 53 d1t06a_ a.118.1.17 (A:) Hypoth  38.1      27   0.002   26.9   5.8   81   77-158   111-191 (235)
 54 d1t06a_ a.118.1.17 (A:) Hypoth  37.1      13 0.00096   28.9   3.7   81  288-369   110-191 (235)
 55 d1szaa_ a.118.9.4 (A:) PCF11 p  25.9      65  0.0047   22.4   5.6   83  257-350    24-106 (144)
 56 d2b6ca1 a.118.1.17 (A:3-215) H  25.9 1.2E+02  0.0088   22.4  11.4  139  167-328    57-196 (213)
 57 d1elka_ a.118.9.2 (A:) Tom1 pr  23.8      52  0.0038   23.3   4.7   73   75-147    50-126 (153)
 58 d1w9ca_ a.118.1.19 (A:) Export  23.4 1.7E+02   0.012   23.3  13.4  139  175-315    44-196 (321)

No 1  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.1e-51  Score=397.40  Aligned_cols=364  Identities=54%  Similarity=0.807  Sum_probs=314.3

Q ss_pred             CchhHHhccCCC-CC-CcHHHHHhHHHHHHHHHHHhhhHHHHhhhhccccCCCcccccc------hhhhhHHhhhcCHHH
Q 016714            7 TRAEVRKKGYKT-GV-DADEARRRREDNLVEIRKNKREDNLLKKRREGLLLQPQQQGLD------ASQNAIEKKLESIPS   78 (384)
Q Consensus         7 ~~~~~~~~~~k~-~~-~~~~~r~~r~~~~~~lRk~kr~~~l~~kR~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~   78 (384)
                      +.+++|++.||+ |+ +++|+||||+++++||||+||+++|+|||+.....+.......      ..........+.++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~e~r~kR~~~~veiRk~kr~e~l~kkR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   80 (503)
T d1wa5b_           1 FVPEYRRTNFKNKGRFSADELRRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDEEDESSVSADQQFYSQLQQELPQ   80 (503)
T ss_dssp             CCCGGGCC-----------CCCCCTTSSCCCCSCCCCCSCCSCCCCC----------------------------CCHHH
T ss_pred             CCchHHhHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCcccccccccchhccccchhhHHHHHHHHHHHH
Confidence            357899999999 75 9999999999999999999999999999976433222111100      011112233467999


Q ss_pred             HHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHh
Q 016714           79 MVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIE  158 (384)
Q Consensus        79 lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~  158 (384)
                      ++..+++++.+.+..|+..++++++.+..++++.+++.|++|.|+.+|..+.++.++..|+|+|+|++.+++..+..+.+
T Consensus        81 ~~~~~~s~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~~~~~~~  160 (503)
T d1wa5b_          81 MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVD  160 (503)
T ss_dssp             HHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHh
Confidence            99999999999999999999999988878899999999999999999987655889999999999999999999999999


Q ss_pred             cCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCC-CCC
Q 016714          159 HGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGK-PPT  237 (384)
Q Consensus       159 ~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~-~~~  237 (384)
                      .|+++.++.+|.+++.++++.|+|+|+||+.+++.+++.+.+.|++++|+.++ .+.+..+.+.++|+|+++|.+. +..
T Consensus       161 ~g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll-~~~~~~~~~~~~~~l~nl~~~~~~~~  239 (503)
T d1wa5b_         161 ADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-NSNKPSLIRTATWTLSNLCRGKKPQP  239 (503)
T ss_dssp             TTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGG-GSCCHHHHHHHHHHHHHHHCCSSSCC
T ss_pred             CCChHHHHHHhcCCChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhc-ccCCHHHHHHHHHHHHHHhcCCccch
Confidence            99999999999999999999999999999999999999999999999999999 6667789999999999999876 555


Q ss_pred             ChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCC
Q 016714          238 PFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGD  317 (384)
Q Consensus       238 ~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~  317 (384)
                      ......+++|.++.++.++|++++..++|+|++++....+....+.+.|+++.++.++.++++.++.+++++++|++.+.
T Consensus       240 ~~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~  319 (503)
T d1wa5b_         240 DWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGN  319 (503)
T ss_dssp             CHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHH
Confidence            66677899999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHHhCCc
Q 016714          318 DAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHDSFHL  372 (384)
Q Consensus       318 ~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~~~~~  372 (384)
                      +..+..+++.|+++.|..++.++ ++.++++++|+++|+++++++++..+++.|+
T Consensus       320 ~~~~~~~~~~~~l~~l~~ll~~~-~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~  373 (503)
T d1wa5b_         320 DLQTQVVINAGVLPALRLLLSSP-KENIKKEACWTISNITAGNTEQIQAVIDANL  373 (503)
T ss_dssp             HHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
T ss_pred             HHHHHhhhccchHHHHHHHhcCC-CHHHHHHHHHHHHHHhhccHHHHHHHHHccc
Confidence            99999999999999999999998 8999999999999999999999999999988


No 2  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.4e-35  Score=276.01  Aligned_cols=298  Identities=54%  Similarity=0.886  Sum_probs=274.8

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhH
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHT  153 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~  153 (384)
                      .+++.+++.+++++++.|..|+..++++++...+++++.+++.|++|.|+++|++.++++++..|+|+|++++.++++.+
T Consensus        13 ~~i~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~   92 (434)
T d1q1sc_          13 WSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT   92 (434)
T ss_dssp             CCHHHHHHHHTSSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHH
T ss_pred             hhHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhhh
Confidence            67999999999999999999999999999877677789999999999999999776558999999999999999889999


Q ss_pred             HHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccc----hhHHHHHHHHHHhh
Q 016714          154 RVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHS----KLSMLRNATWTLSN  229 (384)
Q Consensus       154 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~----~~~~~~~a~~~L~~  229 (384)
                      ..+++.|++|.|+.+|.+++.++++.|+|+|+|++.+++..+..+.+.|+++.++.++....    .....+.++|++.+
T Consensus        93 ~~i~~~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~  172 (434)
T d1q1sc_          93 KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSN  172 (434)
T ss_dssp             HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHH
T ss_pred             hHhhhccchhhhhhccccCCHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999989999999999999999995433    23567889999999


Q ss_pred             hhcCC-CCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHH
Q 016714          230 FCRGK-PPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALR  308 (384)
Q Consensus       230 L~~~~-~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~  308 (384)
                      ++... +........+++|.+..++.+++++++..++|++++++..+.+....+...|+++.|++++.++++.++..+++
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~  252 (434)
T d1q1sc_         173 LCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALR  252 (434)
T ss_dssp             HTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHH
T ss_pred             HhhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhh
Confidence            99986 34455566889999999999999999999999999999998888888889999999999999999999999999


Q ss_pred             HHHHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHHhCCc
Q 016714          309 TVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHDSFHL  372 (384)
Q Consensus       309 ~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~~~~~  372 (384)
                      ++++++.+++.....+++.|+++.+..++.++ ++++++.|+|+|+|++.++++....+.+.|+
T Consensus       253 ~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~  315 (434)
T d1q1sc_         253 AIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP-KTNIQKEATWTMSNITAGRQDQIQQVVNHGL  315 (434)
T ss_dssp             HHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS-SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
T ss_pred             hhhhHHhhhhHHHHHHHhccccchHHHhhccc-chhhhHHHHHHHhhhccccchhHHHHhhhhh
Confidence            99999999999999999999999999999998 8999999999999999999999999999988


No 3  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.2e-32  Score=262.07  Aligned_cols=304  Identities=28%  Similarity=0.347  Sum_probs=269.9

Q ss_pred             cCHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchh
Q 016714           74 ESIPSMVQGVWS-EDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEH  152 (384)
Q Consensus        74 ~~l~~lv~~l~s-~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~  152 (384)
                      +.+|.++..+++ .++.++..|+++|.++++++ +.....+.+.|++|.++.+|.+++ ++++..|+|+|+||+..+++.
T Consensus       119 g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~-~~~~~~~~~~g~i~~l~~lL~s~~-~~i~~~a~~~L~nia~~~~~~  196 (503)
T d1wa5b_         119 GVVPRLVEFMRENQPEMLQLEAAWALTNIASGT-SAQTKVVVDADAVPLFIQLLYTGS-VEVKEQAIWALGNVAGDSTDY  196 (503)
T ss_dssp             TCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTCHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCHHH
T ss_pred             CChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHhCCChHHHHHHhcCCC-hhHHHHHHHHHHHHhhhhHHH
Confidence            679999999985 46789999999999998764 556677889999999999999888 899999999999999988999


Q ss_pred             HHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhc
Q 016714          153 TRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCR  232 (384)
Q Consensus       153 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~  232 (384)
                      +..+.+.|+++.|+.++.+.+..++..++|+|.|++.............++++.|+.++ .+.+.+++..++|+|.+++.
T Consensus       197 r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~~~~~~~~~~~~~~~l~~l~~~l-~~~d~~~~~~~~~~l~~l~~  275 (503)
T d1wa5b_         197 RDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLI-YSMDTETLVDACWAISYLSD  275 (503)
T ss_dssp             HHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHT-TCCCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHhhcccccchhhcccCCHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999977655555556678899999998 77788999999999999998


Q ss_pred             CCCCCCh-hhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHH
Q 016714          233 GKPPTPF-EQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVG  311 (384)
Q Consensus       233 ~~~~~~~-~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~  311 (384)
                      ..+.... ....++++.++.++.++++.+...+++++++++.+.+.....+.+.|+++.|..++.++++.++..++|+++
T Consensus       276 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~  355 (503)
T d1wa5b_         276 GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTIS  355 (503)
T ss_dssp             SCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred             CCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            7533222 223789999999999999999999999999999999888888999999999999999999999999999999


Q ss_pred             HhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc---CCHHHHHHHHhCCc------cccCCCccc
Q 016714          312 NIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA---GNRAQIQVHDSFHL------FVLHEDFSL  381 (384)
Q Consensus       312 nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~---~~~~~i~~l~~~~~------ll~~~~~~~  381 (384)
                      |++.+++.....+++.|+++.++.++.++ +..++++|+|+|+|++.   ..++++..+++.|+      ++...|.++
T Consensus       356 nl~~~~~~~~~~i~~~~~l~~li~~l~~~-~~~v~~~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~  433 (503)
T d1wa5b_         356 NITAGNTEQIQAVIDANLIPPLVKLLEVA-EYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRI  433 (503)
T ss_dssp             HHTTSCHHHHHHHHHTTCHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHH
T ss_pred             HHhhccHHHHHHHHHccccchhHHhcccC-ChhHHHHHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHH
Confidence            99999999999999999999999999999 89999999999999996   34678899999998      456665543


No 4  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.98  E-value=2.9e-30  Score=242.07  Aligned_cols=305  Identities=25%  Similarity=0.399  Sum_probs=266.5

Q ss_pred             hcCHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCch
Q 016714           73 LESIPSMVQGVWS-EDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSE  151 (384)
Q Consensus        73 ~~~l~~lv~~l~s-~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~  151 (384)
                      .+.+|.|++.|++ +++++|..|+++|.++++.. +.....+++.|++|.|+.+|.+++ +.++..|+|+|+|++.++++
T Consensus        55 ~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~-~~~~~~i~~~~~i~~l~~~L~~~~-~~~~~~a~~~L~nl~~~~~~  132 (434)
T d1q1sc_          55 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGT-SEQTKAVVDGGAIPAFISLLASPH-AHISEQAVWALGNIAGDGSA  132 (434)
T ss_dssp             TTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSC-HHHHHHHHHTTHHHHHHHHTTCSC-HHHHHHHHHHHHHHHTTCHH
T ss_pred             CCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCC-hhhhhHhhhccchhhhhhccccCC-HHHHHHHHHHHHHHhccchH
Confidence            3789999999975 45789999999999998764 566778899999999999999988 99999999999999998889


Q ss_pred             hHHHHHhcCChHHHHHhhcCCC-----HHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHH
Q 016714          152 HTRVVIEHGAVPMFVQLLSSGS-----DDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWT  226 (384)
Q Consensus       152 ~~~~i~~~g~i~~L~~lL~~~~-----~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~  226 (384)
                      .+..+.+.|+++.|+.++...+     ......++|++.+++.............++++.+..++ .+.+++++..++|+
T Consensus       133 ~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll-~~~~~~~~~~a~~~  211 (434)
T d1q1sc_         133 FRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL-HHNDPEVLADSCWA  211 (434)
T ss_dssp             HHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHT-TCSCHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHH-hccccchhhhHHhh
Confidence            9999999999999999997643     45667889999999987665555555667888888888 67788999999999


Q ss_pred             HhhhhcCCCCCCh-hhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHH
Q 016714          227 LSNFCRGKPPTPF-EQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIP  305 (384)
Q Consensus       227 L~~L~~~~~~~~~-~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~  305 (384)
                      |.+++...+.... ....+++|.++.++.+++++++..++++|.+++.+++.....+.+.|+++.++.+|.++++.++..
T Consensus       212 l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~  291 (434)
T d1q1sc_         212 ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKE  291 (434)
T ss_dssp             HHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHH
T ss_pred             hcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhhhhHHHHHHHhccccchHHHhhcccchhhhHH
Confidence            9999987532222 223789999999999999999999999999999988888888999999999999999999999999


Q ss_pred             HHHHHHHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc-CCHHHHHHHHhCCc------cccCCC
Q 016714          306 ALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA-GNRAQIQVHDSFHL------FVLHED  378 (384)
Q Consensus       306 a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~-~~~~~i~~l~~~~~------ll~~~~  378 (384)
                      |+++++|++.+.+.....+.+.|+++.++.++.++ ++.++..|+|+++|++. ++++++..+.+.|+      +++.+|
T Consensus       292 a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~-~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d  370 (434)
T d1q1sc_         292 ATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA-DFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKD  370 (434)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSS-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSC
T ss_pred             HHHHHhhhccccchhHHHHhhhhhHHHHHHHHhcc-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCC
Confidence            99999999998888888999999999999999998 89999999999999997 78899999999998      456655


Q ss_pred             ccc
Q 016714          379 FSL  381 (384)
Q Consensus       379 ~~~  381 (384)
                      .++
T Consensus       371 ~~~  373 (434)
T d1q1sc_         371 TKI  373 (434)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543


No 5  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=1.1e-26  Score=223.43  Aligned_cols=290  Identities=21%  Similarity=0.206  Sum_probs=249.1

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHH-cCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchh
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIK-AGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEH  152 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~-~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~  152 (384)
                      +.+|.|++.|++++..++..|+..+.++...  +.....++. .|+++.++.+|.++++++++..|+++|.+++. +++.
T Consensus        17 ~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~--~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~-~~~~   93 (529)
T d1jdha_          17 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKK--EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH-HREG   93 (529)
T ss_dssp             CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTS--HHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT-SHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc--cHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-Cchh
Confidence            6799999999999999999999999998653  344455554 47899999999775558999999999999987 5888


Q ss_pred             HHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhc
Q 016714          153 TRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCR  232 (384)
Q Consensus       153 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~  232 (384)
                      +..+++.|++|.|+.+|++++++++..|+++|+|++.+.+..+..+.+.|++++|+.++ ++.+++++..++++|.+++.
T Consensus        94 ~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL-~~~~~~~~~~a~~~L~~l~~  172 (529)
T d1jdha_          94 LLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL-NKTNVKFLAITTDCLQILAY  172 (529)
T ss_dssp             HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGG-GCCCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHH-HccChHHHHHHHHHHHHHhh
Confidence            89999999999999999999999999999999999999888889999999999999999 77788999999999999998


Q ss_pred             CCCCCC-hhhhhchHHHHHHhhccC-CHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHH
Q 016714          233 GKPPTP-FEQVKPALPILQRLIHLN-DEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTV  310 (384)
Q Consensus       233 ~~~~~~-~~~~~~~~~~L~~lL~~~-~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l  310 (384)
                      ..+... .....++++.++.++.+. +..++..+++++.+++...+ ....+.+.|+++.|+.++.+++..++..+++++
T Consensus       173 ~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~-~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l  251 (529)
T d1jdha_         173 GNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL  251 (529)
T ss_dssp             TCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHH
T ss_pred             hhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhcccc-ccchhhhhhhhhhHHHHhcccchhhhhhhhhHH
Confidence            753322 233378899999999654 57789999999999987654 456789999999999999999999999999999


Q ss_pred             HHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHHhCCc
Q 016714          311 GNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHDSFHL  372 (384)
Q Consensus       311 ~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~~~~~  372 (384)
                      .+++......   ....|+++.|+.++.++ +..++..|+++|+|++.++++....+.+.|.
T Consensus       252 ~~ls~~~~~~---~~~~~~i~~Lv~ll~~~-~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~  309 (529)
T d1jdha_         252 RNLSDAATKQ---EGMEGLLGTLVQLLGSD-DINVVTCAAGILSNLTCNNYKNKMMVCQVGG  309 (529)
T ss_dssp             HHHHTTCTTC---SCCHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTTCHHHHHHHHHTTH
T ss_pred             Hhccccccch---hhhhhcchhhhhhcccc-cHHHHHHHHHHHHhhccchhHHHHHHHHhhh
Confidence            9997654321   12247889999999998 8999999999999999999998888888776


No 6  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94  E-value=6.1e-26  Score=218.19  Aligned_cols=280  Identities=17%  Similarity=0.204  Sum_probs=245.4

Q ss_pred             cCHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchh
Q 016714           74 ESIPSMVQGVWS-EDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEH  152 (384)
Q Consensus        74 ~~l~~lv~~l~s-~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~  152 (384)
                      +.++.++..|.+ ++++.+..|+.+|.++.. + .+....+++.|++|.|+.+|++++ ++++..|+++|+|++.+++..
T Consensus        59 ~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~-~-~~~~~~i~~~g~i~~Li~lL~~~~-~~v~~~a~~aL~~l~~~~~~~  135 (529)
T d1jdha_          59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSH-H-REGLLAIFKSGGIPALVKMLGSPV-DSVLFYAITTLHNLLLHQEGA  135 (529)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT-S-HHHHHHHHHTTHHHHHHHHTTCSC-HHHHHHHHHHHHHHHHHCTTH
T ss_pred             hHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-C-chhHHHHHHCCCHHHHHHHhCCCC-HHHHHHHHHHHHHhhcccchh
Confidence            457899999974 678899999999998854 3 677788999999999999999988 999999999999999988889


Q ss_pred             HHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhc
Q 016714          153 TRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCR  232 (384)
Q Consensus       153 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~  232 (384)
                      +..+.+.|++|.|+.+|.+++++++..++++|++++..++..+..+...|++++|+.++..+.+..++..+++++.+++.
T Consensus       136 ~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~  215 (529)
T d1jdha_         136 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV  215 (529)
T ss_dssp             HHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred             hhHHHhcCCchHHHHHHHccChHHHHHHHHHHHHHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999999999999988888889999999999999999777778899999999999997


Q ss_pred             CCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHH
Q 016714          233 GKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGN  312 (384)
Q Consensus       233 ~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~n  312 (384)
                      ...........++++.|..++.+++.+++..+++++.+++......   ....|+++.|++++.+++..++..|+++|+|
T Consensus       216 ~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls~~~~~~---~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~  292 (529)
T d1jdha_         216 CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ---EGMEGLLGTLVQLLGSDDINVVTCAAGILSN  292 (529)
T ss_dssp             STTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTC---SCCHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhHHHHhcccchhhhhhhhhHHHhccccccch---hhhhhcchhhhhhcccccHHHHHHHHHHHHh
Confidence            6433333334789999999999999999999999999998765432   1234789999999999999999999999999


Q ss_pred             hhcCChHHHHHHHHcCchHHHHHHhcc-CCchhHHHHHHHHHHHHhcC
Q 016714          313 IVTGDDAQTQFVIDNGVLPCLYQLLTQ-NHKKSIKKEACWTISNITAG  359 (384)
Q Consensus       313 l~~~~~~~~~~i~~~g~l~~L~~ll~~-~~~~~v~~~a~~~L~nl~~~  359 (384)
                      ++.+++.....+.+.|+++.++.++.. ++.+.+++.|+|+|.|++.+
T Consensus       293 l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~~~a~~aL~~l~~~  340 (529)
T d1jdha_         293 LTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSR  340 (529)
T ss_dssp             HTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSS
T ss_pred             hccchhHHHHHHHHhhhHHHHHHHHHhhhcchhHHHHHHHHhhcccch
Confidence            999898888889999999999988853 32678999999999999974


No 7  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=1.7e-23  Score=194.89  Aligned_cols=280  Identities=20%  Similarity=0.223  Sum_probs=221.9

Q ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHH
Q 016714           75 SIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTR  154 (384)
Q Consensus        75 ~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~  154 (384)
                      .||.+++.|+++++++|..|+++|.+++..+ ++....+.+.|++|.|+++|++++ ++++..|+++|++++.++++.+.
T Consensus         3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~~~-~~v~~~a~~aL~~L~~~~~~~~~   80 (457)
T d1xm9a1           3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQD-ESAKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKL   80 (457)
T ss_dssp             CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSC-SSHHHHHHHTTHHHHHHHHTTSSC-HHHHHHHHHHHHHHHSSCHHHHH
T ss_pred             CHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCCcHHHHHHHHCCCC-HHHHHHHHHHHHHHHcCCHHHHH
Confidence            6899999999999999999999999997654 778889999999999999999988 99999999999999998899999


Q ss_pred             HHHhcCChHHHHHhhcC-CCHHHHHHHHHHHHhhhCCCCchhh-------------------------------------
Q 016714          155 VVIEHGAVPMFVQLLSS-GSDDVREQAVWALGNVAGDSPSCRD-------------------------------------  196 (384)
Q Consensus       155 ~i~~~g~i~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~~~~-------------------------------------  196 (384)
                      .+.+.|+++.|+.++.+ .++.++..++++|++++.+......                                     
T Consensus        81 ~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~  160 (457)
T d1xm9a1          81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF  160 (457)
T ss_dssp             HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHHH
T ss_pred             HHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhhHHHHHhcccHHHHHHHHhhhhhhhcchhhhhcccccHHHH
Confidence            99999999999998865 6788999999999999865421100                                     


Q ss_pred             -------------------HHHhcCChHHHHHHhc---------------------------------------------
Q 016714          197 -------------------LVLSSGALMPLLAQLN---------------------------------------------  212 (384)
Q Consensus       197 -------------------~i~~~g~i~~L~~~l~---------------------------------------------  212 (384)
                                         .....|+++.++.++.                                             
T Consensus       161 ~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  240 (457)
T d1xm9a1         161 FNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNA  240 (457)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC---
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhhhh
Confidence                               0012344555554431                                             


Q ss_pred             -----------------------------------------------------ccchhHHHHHHHHHHhhhhcCCCCCCh
Q 016714          213 -----------------------------------------------------EHSKLSMLRNATWTLSNFCRGKPPTPF  239 (384)
Q Consensus       213 -----------------------------------------------------~~~~~~~~~~a~~~L~~L~~~~~~~~~  239 (384)
                                                                           ...++.....+.+++.+++........
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~  320 (457)
T d1xm9a1         241 YTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSS  320 (457)
T ss_dssp             -------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHH
T ss_pred             hhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhcccchHHHHHHHHHHHHHhhccccchH
Confidence                                                                 011123344566666666655322111


Q ss_pred             ----h--hhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCC------ChhhHHHHH
Q 016714          240 ----E--QVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHP------SATVLIPAL  307 (384)
Q Consensus       240 ----~--~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~------~~~v~~~a~  307 (384)
                          .  ...+++|.|+.++.++++.++..+++++++++..... ...+ ..++++.++.+|...      +..++..++
T Consensus       321 ~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~l~~La~~~~~-~~~i-~~~~i~~li~~L~~~~~~~~~~~~v~~~a~  398 (457)
T d1xm9a1         321 GMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSAC  398 (457)
T ss_dssp             HHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGG-HHHH-HHHTHHHHHHTTTSCCSCSTTHHHHHHHHH
T ss_pred             HHHHHHHHHcCChHHHHhhhcCccHHHHHHHHHHHHHHhhChhH-HHHH-HHhhHHHHHHHHhccccCcCCcHHHHHHHH
Confidence                1  1257899999999999999999999999999977554 3333 456789999998542      346889999


Q ss_pred             HHHHHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          308 RTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       308 ~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      .+|+|++..+++....+++.|+++.|+.++.+.+++.+++.|+++|+|+++
T Consensus       399 ~~L~~l~~~~~~~~~~l~~~g~i~~L~~l~~~~~~~~~~~aA~~~L~~L~~  449 (457)
T d1xm9a1         399 YTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS  449 (457)
T ss_dssp             HHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHc
Confidence            999999998998889999999999999999876578899999999999976


No 8  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=8.9e-22  Score=183.14  Aligned_cols=253  Identities=18%  Similarity=0.196  Sum_probs=198.1

Q ss_pred             CCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhh
Q 016714          117 GVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRD  196 (384)
Q Consensus       117 g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~  196 (384)
                      +.||.|+++|++++ ++++..|+++|+|+|.++++.+..+.+.|++|.|+.+|++++++++..|+++|+||+.+++.++.
T Consensus         2 ~~ip~lv~~L~~~~-~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~   80 (457)
T d1xm9a1           2 LTIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL   80 (457)
T ss_dssp             CCHHHHHHHHHSSC-THHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHH
T ss_pred             CCHHHHHHHhCCCC-HHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence            46999999999999 99999999999999999999999999999999999999999999999999999999998888999


Q ss_pred             HHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhh-----------------------------------
Q 016714          197 LVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQ-----------------------------------  241 (384)
Q Consensus       197 ~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~-----------------------------------  241 (384)
                      .+.+.|+++.++.++....+.+++..++++|.+++..........                                   
T Consensus        81 ~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~  160 (457)
T d1xm9a1          81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF  160 (457)
T ss_dssp             HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHHH
T ss_pred             HHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhhHHHHHhcccHHHHHHHHhhhhhhhcchhhhhcccccHHHH
Confidence            999999999999999777788899999999999998642211100                                   


Q ss_pred             --------------------h--hchHHHHHHhhcc--------------------------------------------
Q 016714          242 --------------------V--KPALPILQRLIHL--------------------------------------------  255 (384)
Q Consensus       242 --------------------~--~~~~~~L~~lL~~--------------------------------------------  255 (384)
                                          .  .++++.++.++.+                                            
T Consensus       161 ~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  240 (457)
T d1xm9a1         161 FNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNA  240 (457)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC---
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhhhh
Confidence                                0  1233444333210                                            


Q ss_pred             -------------------------------------------------------CCHhHHHHHHHHHHHhccCChH---
Q 016714          256 -------------------------------------------------------NDEEVLTDACWALSYLSDGPND---  277 (384)
Q Consensus       256 -------------------------------------------------------~~~~i~~~a~~~l~~l~~~~~~---  277 (384)
                                                                             .++.+...+.+++..++.....   
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~  320 (457)
T d1xm9a1         241 YTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSS  320 (457)
T ss_dssp             -------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHH
T ss_pred             hhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhcccchHHHHHHHHHHHHHhhccccchH
Confidence                                                                   1122333444555555443221   


Q ss_pred             --HHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHHHHHhccCC-----chhHHHHHH
Q 016714          278 --KIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNH-----KKSIKKEAC  350 (384)
Q Consensus       278 --~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~-----~~~v~~~a~  350 (384)
                        ....+.+.|+++.|+.+|.++++.++..++++++|++... ..... +..++++.++.++....     +++++..|+
T Consensus       321 ~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~l~~La~~~-~~~~~-i~~~~i~~li~~L~~~~~~~~~~~~v~~~a~  398 (457)
T d1xm9a1         321 GMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LLHRV-MGNQVFPEVTRLLTSHTGNTSNSEDILSSAC  398 (457)
T ss_dssp             HHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSG-GGHHH-HHHHTHHHHHHTTTSCCSCSTTHHHHHHHHH
T ss_pred             HHHHHHHHHcCChHHHHhhhcCccHHHHHHHHHHHHHHhhCh-hHHHH-HHHhhHHHHHHHHhccccCcCCcHHHHHHHH
Confidence              1223345689999999999999999999999999998744 33343 34567889999986531     457999999


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCc
Q 016714          351 WTISNITAGNRAQIQVHDSFHL  372 (384)
Q Consensus       351 ~~L~nl~~~~~~~i~~l~~~~~  372 (384)
                      ++|.|++.++++..+.+++.|.
T Consensus       399 ~~L~~l~~~~~~~~~~l~~~g~  420 (457)
T d1xm9a1         399 YTVRNLMASQPQLAKQYFSSSM  420 (457)
T ss_dssp             HHHHHHHTTCTHHHHHHCCHHH
T ss_pred             HHHHHHhcCCHHHHHHHHHCCC
Confidence            9999999999998999998875


No 9  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=5.9e-22  Score=172.87  Aligned_cols=195  Identities=16%  Similarity=0.202  Sum_probs=175.1

Q ss_pred             hHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHH-hhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHH
Q 016714          132 PQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQ-LLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQ  210 (384)
Q Consensus       132 ~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~-lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~  210 (384)
                      .+.+..|+.+|.+++. +.+....+...|+++.++. ++.+++++++..|+++|++++.+++.++..+.+.|+++.|+.+
T Consensus        31 ~~~~~~Al~~L~~L~~-~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~l  109 (264)
T d1xqra1          31 QQEREGALELLADLCE-NMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL  109 (264)
T ss_dssp             HHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-CHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence            6788999999999997 4778888999999999886 7888999999999999999999999899999999999999999


Q ss_pred             hcccchhHHHHHHHHHHhhhhcCCCCCChh-hhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChH
Q 016714          211 LNEHSKLSMLRNATWTLSNFCRGKPPTPFE-QVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCP  289 (384)
Q Consensus       211 l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~-~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~  289 (384)
                      +....++.++..++|+|++++++.+..... ...++++.|++++.+++..++..++++|++++..+++....+.+.|+++
T Consensus       110 L~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~  189 (264)
T d1xqra1         110 LDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ  189 (264)
T ss_dssp             HHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHH
Confidence            976778889999999999999987443333 3488999999999999999999999999999998888888999999999


Q ss_pred             HHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHc
Q 016714          290 RLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDN  327 (384)
Q Consensus       290 ~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~  327 (384)
                      .|+.+|.++++.++..|+++|++++..++.....+...
T Consensus       190 ~L~~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~~~~  227 (264)
T d1xqra1         190 QLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREP  227 (264)
T ss_dssp             HHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHHHHHCG
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Confidence            99999999999999999999999999888777666543


No 10 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84  E-value=1.3e-20  Score=164.29  Aligned_cols=201  Identities=12%  Similarity=0.122  Sum_probs=177.4

Q ss_pred             cCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhh-hchHHH
Q 016714          170 SSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQV-KPALPI  248 (384)
Q Consensus       170 ~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~-~~~~~~  248 (384)
                      .+.+.+.+..|+.+|.+++.+.. ++..+...|++++++..+..+++++++..++++|++++.+.+....... .+++|.
T Consensus        27 ~~~~~~~~~~Al~~L~~L~~~~d-~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~  105 (264)
T d1xqra1          27 QAADQQEREGALELLADLCENMD-NAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRK  105 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSHH-HHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHcCHH-HHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence            34567889999999999996544 6677889999999998665888999999999999999997654443333 789999


Q ss_pred             HHHhhcc-CCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHc
Q 016714          249 LQRLIHL-NDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDN  327 (384)
Q Consensus       249 L~~lL~~-~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~  327 (384)
                      |+.++.+ .++.++..+++++++++.+.+.....+...|+++.|+.+|.+++..++..++++|+|++.+++.....+.+.
T Consensus       106 Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~  185 (264)
T d1xqra1         106 LLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSM  185 (264)
T ss_dssp             HHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHT
T ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHh
Confidence            9999964 578899999999999999999888889999999999999999999999999999999999888888999999


Q ss_pred             CchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHHhCCc
Q 016714          328 GVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHDSFHL  372 (384)
Q Consensus       328 g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~~~~~  372 (384)
                      |+++.|+.++.++ ++.+++.|+|+|.+++.++++.+......++
T Consensus       186 ~~v~~L~~lL~~~-~~~~~~~a~~aL~~L~~~~~~~~~~~~~~~l  229 (264)
T d1xqra1         186 GMVQQLVALVRTE-HSPFHEHVLGALCSLVTDFPQGVRECREPEL  229 (264)
T ss_dssp             THHHHHHHHHTSC-CSTHHHHHHHHHHHHHTTCHHHHHHHHCGGG
T ss_pred             hhHHHHHHHHcCC-CHHHHHHHHHHHHHHHhcCHHHHHHHHHhhh
Confidence            9999999999998 8999999999999999999998887776554


No 11 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.28  E-value=5.8e-10  Score=95.84  Aligned_cols=231  Identities=14%  Similarity=0.112  Sum_probs=150.9

Q ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHH
Q 016714           75 SIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTR  154 (384)
Q Consensus        75 ~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~  154 (384)
                      ..+.|++.|.++++.++..|+..|..+-.            ...+|.|+.++++++ +.++..|+++|+.+...... ..
T Consensus        20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~~------------~~~~~~l~~~l~d~~-~~vr~~a~~aL~~l~~~~~~-~~   85 (276)
T d1oyza_          20 NDDELFRLLDDHNSLKRISSARVLQLRGG------------QDAVRLAIEFCSDKN-YIRRDIGAFILGQIKICKKC-ED   85 (276)
T ss_dssp             CHHHHHHHTTCSSHHHHHHHHHHHHHHCC------------HHHHHHHHHHHTCSS-HHHHHHHHHHHHHSCCCTTT-HH
T ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHhhCC------------HhHHHHHHHHHcCCC-HHHHHHHHHHHHHhcccccc-cc
Confidence            56889999999999999999999987621            135899999999988 99999999999988653221 11


Q ss_pred             HHHhcCChHHHH-HhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcC
Q 016714          155 VVIEHGAVPMFV-QLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRG  233 (384)
Q Consensus       155 ~i~~~g~i~~L~-~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~  233 (384)
                      .     .++.+. .++.++++.++..++.+|++++...+....     ..++.+...+ .+.+..++..+++++......
T Consensus        86 ~-----~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~-----~~~~~l~~~~-~d~~~~vr~~a~~~l~~~~~~  154 (276)
T d1oyza_          86 N-----VFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSP-----KIVEQSQITA-FDKSTNVRRATAFAISVINDK  154 (276)
T ss_dssp             H-----HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHT-TCSCHHHHHHHHHHHHTC---
T ss_pred             c-----hHHHHHHHHhcCCChhHHHHHHHHHHHHccccchhhH-----HHHHHHHHHh-cCcchHHHHHHHHHHhhcchH
Confidence            1     123333 356788999999999999999865442211     2345556665 566777777777777654432


Q ss_pred             CCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHH----------------------HHcCChHHH
Q 016714          234 KPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAV----------------------IEAGVCPRL  291 (384)
Q Consensus       234 ~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~----------------------~~~g~~~~L  291 (384)
                                ..++.+..++...+..+...+.+++..+..........+                      ....+++.|
T Consensus       155 ----------~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~L  224 (276)
T d1oyza_         155 ----------ATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVL  224 (276)
T ss_dssp             ----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred             ----------HHHHHHHHhcccccchhhhhHHHHHHhhhccccccchhhhhhhhhhhhhhhhhhccccchhhhhhhHHHH
Confidence                      234445555555555555555555544433322211110                      112356777


Q ss_pred             HHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHH
Q 016714          292 VELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTI  353 (384)
Q Consensus       292 ~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L  353 (384)
                      +..+.+  +.++..++++||.+..           .+.++.|..++...++..++..|+-+|
T Consensus       225 ~~~l~d--~~vr~~a~~aL~~ig~-----------~~~~~~L~~~l~~~~d~~vr~~A~~~L  273 (276)
T d1oyza_         225 CDELKK--NTVYDDIIEAAGELGD-----------KTLLPVLDTMLYKFDDNEIITSAIDKL  273 (276)
T ss_dssp             HHHHTS--SSCCHHHHHHHHHHCC-----------GGGHHHHHHHHTTSSCCHHHHHHHHHH
T ss_pred             HHHhCC--hHHHHHHHHHHHHcCC-----------HHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence            777764  3577788888887742           246788888887765778888887665


No 12 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27  E-value=7.9e-11  Score=112.99  Aligned_cols=267  Identities=11%  Similarity=0.085  Sum_probs=195.8

Q ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHH
Q 016714           75 SIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTR  154 (384)
Q Consensus        75 ~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~  154 (384)
                      .++.+...+++++++++..|+..+..++..-.........-..++|.+...+.+.+ +.++..++.++..++..  -...
T Consensus       282 l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~-~~vr~~~~~~l~~~~~~--~~~~  358 (588)
T d1b3ua_         282 LVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDAN-QHVKSALASVIMGLSPI--LGKD  358 (588)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSC-HHHHHHHHTTGGGGHHH--HCHH
T ss_pred             hhHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCC-hHHHHHHHHHHhhhhhc--cchh
Confidence            46777778888888999999988888765432333444445678899999998888 89999999988877642  1111


Q ss_pred             HHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCC
Q 016714          155 VVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGK  234 (384)
Q Consensus       155 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~  234 (384)
                      ... ...+|.+..++.+++++++..++.+++.+...-..  ..+ ....++.+...+ .+.+..++..++.++..++...
T Consensus       359 ~~~-~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~--~~~-~~~ll~~l~~~~-~d~~~~~r~~~~~~l~~l~~~~  433 (588)
T d1b3ua_         359 NTI-EHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI--RQL-SQSLLPAIVELA-EDAKWRVRLAIIEYMPLLAGQL  433 (588)
T ss_dssp             HHH-HHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH--HHH-HHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcch--hhh-hhHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHc
Confidence            222 34689999999999999999999988887643211  111 123566677766 6677888999999888887642


Q ss_pred             CCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhh
Q 016714          235 PPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIV  314 (384)
Q Consensus       235 ~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~  314 (384)
                      ..  ......+.|.+..++..+...++..|+++++.++......   .....+++.+..++.+++...|..++.+++.+.
T Consensus       434 ~~--~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~---~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~  508 (588)
T d1b3ua_         434 GV--EFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKE---WAHATIIPKVLAMSGDPNYLHRMTTLFCINVLS  508 (588)
T ss_dssp             CG--GGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHH---HHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred             Ch--HhHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHhCcH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            11  1122456778888899999999999999999997542111   123357899999999999999999999999987


Q ss_pred             cCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          315 TGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       315 ~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      ...+.   ..+...++|.+.+++.++ .+.||..+++++..+..
T Consensus       509 ~~~~~---~~~~~~ilp~ll~~~~D~-v~nVR~~a~~~l~~i~~  548 (588)
T d1b3ua_         509 EVCGQ---DITTKHMLPTVLRMAGDP-VANVRFNVAKSLQKIGP  548 (588)
T ss_dssp             HHHHH---HHHHHHTHHHHHHGGGCS-CHHHHHHHHHHHHHHGG
T ss_pred             HHcCh---HHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHH
Confidence            53221   223446899999999998 89999999999999986


No 13 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26  E-value=2.8e-10  Score=108.97  Aligned_cols=259  Identities=16%  Similarity=0.162  Sum_probs=188.6

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhH
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHT  153 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~  153 (384)
                      ...+.+++.+.+++.+.+.-+...+..+...+  +...    .=+++.|.+-|.+++ +.++..|+++|+++..  ++..
T Consensus        46 ~l~~~vi~~~~s~d~~~Kkl~yl~l~~~~~~~--~d~~----~l~intl~kDl~d~n-~~iR~lALr~L~~i~~--~~i~  116 (579)
T d2vglb_          46 SLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQ--PDMA----IMAVNSFVKDCEDPN-PLIRALAVRTMGCIRV--DKIT  116 (579)
T ss_dssp             GGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHS--HHHH----HTTHHHHGGGSSSSS-HHHHHHHHHHHHTCCS--GGGH
T ss_pred             hHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCC--ccHH----HHHHHHHHHHcCCCC-HHHHHHHHHHHHcCCC--HHHH
Confidence            35789999999999988888888888776532  2111    136889999999888 9999999999998865  4433


Q ss_pred             HHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcC
Q 016714          154 RVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRG  233 (384)
Q Consensus       154 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~  233 (384)
                      +     ..++.+.+++.++++.||..|+.+++.+....+..   +...+.++.+..++ .+.++.++.+++.+|..++..
T Consensus       117 ~-----~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~p~~---~~~~~~~~~L~~lL-~D~n~~V~~~Al~~L~~I~~~  187 (579)
T d2vglb_         117 E-----YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLI-ADSNPMVVANAVAALSEISES  187 (579)
T ss_dssp             H-----HHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCC---HHHHHHHHHHHHTT-SCSCHHHHHHHHHHHHHHTTS
T ss_pred             H-----HHHHHHHHHHhcCcHHHHHHHHHHHHHHhccChhh---hhhhhHHHHHHHHH-cCCChHHHHHHHHHHHHHHHh
Confidence            3     24688889999999999999999999998776642   34456778888888 778899999999999999987


Q ss_pred             CCCCC-hhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHH
Q 016714          234 KPPTP-FEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGN  312 (384)
Q Consensus       234 ~~~~~-~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~n  312 (384)
                      .+... .......++.+...+...++..+..++.++..++.........     +++.+...|.+.++.++..++.++..
T Consensus       188 ~~~~~~~~l~~~~i~~Ll~~l~~~~~~~q~~il~~L~~~~~~~~~~~~~-----li~~l~~~L~~~n~~V~~~a~~~i~~  262 (579)
T d2vglb_         188 HPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQS-----ICERVTPRLSHANSAVVLSAVKVLMK  262 (579)
T ss_dssp             CCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHHHHH-----HHHHHTTCSCSSTTHHHHHHHHHHHH
T ss_pred             CccchhHHhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHHcCchHHHHHHHHHHHHH
Confidence            64433 3334677888888899999999999999999988766654443     46788888899999999999998887


Q ss_pred             hhcCC---hHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          313 IVTGD---DAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       313 l~~~~---~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      +....   ......+++ .+.+.+..++ ++ +++++-.|...+..++.
T Consensus       263 ~~~~~~~~~~~~~~~~~-~l~~~l~~L~-s~-~~ei~y~aL~~i~~l~~  308 (579)
T d2vglb_         263 FLELLPKDSDYYNMLLK-KLAPPLVTLL-SG-EPEVQYVALRNINLIVQ  308 (579)
T ss_dssp             SCCSCCBTTBSHHHHHH-HTHHHHHHHT-TS-CHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCcchHHHHHHHH-HhhHHHHHHh-cC-CchHHHHHHHHHHHHHH
Confidence            64321   222222222 1333344443 33 35555556655555554


No 14 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24  E-value=2.8e-10  Score=109.06  Aligned_cols=265  Identities=16%  Similarity=0.116  Sum_probs=192.7

Q ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHH
Q 016714           75 SIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTR  154 (384)
Q Consensus        75 ~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~  154 (384)
                      -++.+...+.++++.++..|+.++.++...-   .. ..+..-++|.+..+.+++. ...+..|+..+..++....... 
T Consensus        88 ll~~l~~l~~~~~~~Vr~~a~~~l~~i~~~~---~~-~~~~~~l~p~i~~L~~~~~-~~~r~~a~~ll~~~~~~~~~~~-  161 (588)
T d1b3ua_          88 LLPPLESLATVEETVVRDKAVESLRAISHEH---SP-SDLEAHFVPLVKRLAGGDW-FTSRTSACGLFSVCYPRVSSAV-  161 (588)
T ss_dssp             GHHHHHHHTTSSCHHHHHHHHHHHHHHHTTS---CH-HHHHHTHHHHHHHHHTCSS-HHHHHHHGGGHHHHTTTSCHHH-
T ss_pred             HHHHHHHHccCCCHHHHHHHHHHHHHHHHhC---CH-HHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhHHH-
Confidence            3566667778888999999999999887532   22 2234455676666666655 7888888888888876433221 


Q ss_pred             HHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCC
Q 016714          155 VVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGK  234 (384)
Q Consensus       155 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~  234 (384)
                         ....++.+..++.++++.+|..++.+++.++..-+.   .......++.+..++ .+++..++..++.++..++...
T Consensus       162 ---~~~l~~~~~~l~~D~~~~VR~~a~~~l~~~~~~~~~---~~~~~~l~~~l~~l~-~d~~~~vr~~a~~~l~~i~~~~  234 (588)
T d1b3ua_         162 ---KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLEL---DNVKSEIIPMFSNLA-SDEQDSVRLLAVEACVNIAQLL  234 (588)
T ss_dssp             ---HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCH---HHHHHTHHHHHHHHH-TCSCHHHHTTHHHHHHHHHHHS
T ss_pred             ---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcH---HHHHHHHHHHHHHHh-cCCchhhHHHHHHHHHHhhccC
Confidence               123578888899999999999999999999865331   122333455556655 7778888889999998887643


Q ss_pred             CCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhh
Q 016714          235 PPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIV  314 (384)
Q Consensus       235 ~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~  314 (384)
                      +.  ......++|.+..++.+.++.++..++.+++.++..-..   ......+++.+..++.++++.++..++..++.++
T Consensus       235 ~~--~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~~~---~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~  309 (588)
T d1b3ua_         235 PQ--EDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFC  309 (588)
T ss_dssp             CH--HHHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCH---HHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred             CH--HHHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhhh---hhhhhhhhHHHHHHHhccchHHHHHHHHHHHHHH
Confidence            21  233356788999999999999999999999998754222   1233567899999999999999999999999987


Q ss_pred             cCCh-HHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          315 TGDD-AQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       315 ~~~~-~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      ..-. .......-..+++.+...+.+. ++.+|..++.++..++.
T Consensus       310 ~~l~~~~~~~~~~~~i~~~l~~~~~d~-~~~vr~~~~~~l~~~~~  353 (588)
T d1b3ua_         310 ENLSADCRENVIMSQILPCIKELVSDA-NQHVKSALASVIMGLSP  353 (588)
T ss_dssp             HTSCTTTHHHHHHHTHHHHHHHHHTCS-CHHHHHHHHTTGGGGHH
T ss_pred             HHHhhhhhhhhhHHHHHHHHHHhhcCC-ChHHHHHHHHHHhhhhh
Confidence            5422 2222233346788888888888 88999998888887764


No 15 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24  E-value=6.2e-11  Score=113.63  Aligned_cols=276  Identities=17%  Similarity=0.157  Sum_probs=186.5

Q ss_pred             hcCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchh
Q 016714           73 LESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEH  152 (384)
Q Consensus        73 ~~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~  152 (384)
                      +-.++.+.+.+.++++.++..|++.+.++..   ..-.+.     +++.+.+.|.+++ |.+|..|+.+++.+...+++.
T Consensus        82 ~l~intl~kDl~d~n~~iR~lALr~L~~i~~---~~i~~~-----l~~~l~~~L~D~~-p~VRk~Aa~~l~kl~~~~p~~  152 (579)
T d2vglb_          82 IMAVNSFVKDCEDPNPLIRALAVRTMGCIRV---DKITEY-----LCEPLRKCLKDED-PYVRKTAAVCVAKLHDINAQM  152 (579)
T ss_dssp             HTTHHHHGGGSSSSSHHHHHHHHHHHHTCCS---GGGHHH-----HHHHHHHHSSCSC-HHHHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHcCCC---HHHHHH-----HHHHHHHHHhcCc-HHHHHHHHHHHHHHhccChhh
Confidence            3467889999999999999999999886632   222222     5788889999888 999999999999998765553


Q ss_pred             HHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhc
Q 016714          153 TRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCR  232 (384)
Q Consensus       153 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~  232 (384)
                         +...+.++.|..++.++++.++..|+.+|+.++...+...-.-+..+.+..++..+ ...++..+..++.+|..++.
T Consensus       153 ---~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~~~~~l~~~~i~~Ll~~l-~~~~~~~q~~il~~L~~~~~  228 (579)
T d2vglb_         153 ---VEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTAL-NECTEWGQIFILDCLSNYNP  228 (579)
T ss_dssp             ---HHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTSCC
T ss_pred             ---hhhhhHHHHHHHHHcCCChHHHHHHHHHHHHHHHhCccchhHHhhHHHHHHHHhcc-CCCCHHHHHHHHHHHHHhCC
Confidence               23456789999999999999999999999999876543211111223456677776 45566677777777766654


Q ss_pred             CCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCC---hHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHH
Q 016714          233 GKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGP---NDKIQAVIEAGVCPRLVELLMHPSATVLIPALRT  309 (384)
Q Consensus       233 ~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~---~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~  309 (384)
                      .    .......+++.+...|++.++.++..++.++..+....   ......+.+ .+.+.++.++ +.++.++..|++.
T Consensus       229 ~----~~~~~~~li~~l~~~L~~~n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~-~l~~~l~~L~-s~~~ei~y~aL~~  302 (579)
T d2vglb_         229 K----DDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLK-KLAPPLVTLL-SGEPEVQYVALRN  302 (579)
T ss_dssp             C----SHHHHHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHH-HTHHHHHHHT-TSCHHHHHHHHHH
T ss_pred             C----CHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhcCCcchHHHHHHHH-HhhHHHHHHh-cCCchHHHHHHHH
Confidence            3    22334567788888899999999999999988775432   122222221 2344455544 3446666667766


Q ss_pred             HHHhhcCCh-----------------HHH-H----HHH---Hc----CchHHHHHHhccCCchhHHHHHHHHHHHHhcCC
Q 016714          310 VGNIVTGDD-----------------AQT-Q----FVI---DN----GVLPCLYQLLTQNHKKSIKKEACWTISNITAGN  360 (384)
Q Consensus       310 l~nl~~~~~-----------------~~~-~----~i~---~~----g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~  360 (384)
                      +..++...+                 ..+ .    .+.   +.    .+++.|...+.+. +.++++.++++++.++...
T Consensus       303 i~~l~~~~p~~l~~~~~~~~~~~~d~~~ik~~~L~iL~~l~~~~n~~~Il~eL~~y~~~~-d~~~~~~ai~aI~~la~~~  381 (579)
T d2vglb_         303 INLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEV-DVDFVRKAVRAIGRCAIKV  381 (579)
T ss_dssp             HHHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHHHHHHHTCCSSTHHHHHHHHHHHTTSS-CHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhCHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHcChhhHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHhC
Confidence            666542211                 000 0    000   11    2455666677777 8899999999999999866


Q ss_pred             HHHHHHHH
Q 016714          361 RAQIQVHD  368 (384)
Q Consensus       361 ~~~i~~l~  368 (384)
                      ++..+.++
T Consensus       382 ~~~~~~~i  389 (579)
T d2vglb_         382 EQSAERCV  389 (579)
T ss_dssp             HHHHHHHH
T ss_pred             chHHHHHH
Confidence            65555444


No 16 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.15  E-value=1.7e-09  Score=92.86  Aligned_cols=216  Identities=17%  Similarity=0.172  Sum_probs=150.5

Q ss_pred             HcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCch
Q 016714          115 KAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSC  194 (384)
Q Consensus       115 ~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~  194 (384)
                      +....+.|+++|++++ +.++..|+.+|+.+..           ..+++.|+.++.++++.++..|+++|+.+...... 
T Consensus        17 ~~~~~~~L~~~L~d~~-~~vR~~A~~~L~~~~~-----------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~-   83 (276)
T d1oyza_          17 KKLNDDELFRLLDDHN-SLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKC-   83 (276)
T ss_dssp             HTSCHHHHHHHTTCSS-HHHHHHHHHHHHHHCC-----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTT-
T ss_pred             ccCCHHHHHHHhcCCC-HHHHHHHHHHHHhhCC-----------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccc-
Confidence            3456778999999988 9999999999998753           13589999999999999999999999998654332 


Q ss_pred             hhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccC
Q 016714          195 RDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDG  274 (384)
Q Consensus       195 ~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~  274 (384)
                      .+     ..++.+...+..+.++.++..++++|.+++...+    ......++.+...+.+.++.++..++.+++.+.. 
T Consensus        84 ~~-----~~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~----~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~~~~-  153 (276)
T d1oyza_          84 ED-----NVFNILNNMALNDKSACVRATAIESTAQRCKKNP----IYSPKIVEQSQITAFDKSTNVRRATAFAISVIND-  153 (276)
T ss_dssp             HH-----HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG----GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC---
T ss_pred             cc-----chHHHHHHHHhcCCChhHHHHHHHHHHHHccccc----hhhHHHHHHHHHHhcCcchHHHHHHHHHHhhcch-
Confidence            11     1345666666678889999999999999987532    1224567788888888999999999888887543 


Q ss_pred             ChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHH----------------------HcCchHH
Q 016714          275 PNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVI----------------------DNGVLPC  332 (384)
Q Consensus       275 ~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~----------------------~~g~l~~  332 (384)
                                ...++.+..++...+..++..+..+++++..........++                      ....++.
T Consensus       154 ----------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~  223 (276)
T d1oyza_         154 ----------KATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSV  223 (276)
T ss_dssp             -----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCGGGHHH
T ss_pred             ----------HHHHHHHHHhcccccchhhhhHHHHHHhhhccccccchhhhhhhhhhhhhhhhhhccccchhhhhhhHHH
Confidence                      23345555555555555555555555554433332211111                      1246777


Q ss_pred             HHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHH
Q 016714          333 LYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHD  368 (384)
Q Consensus       333 L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~  368 (384)
                      |...+.++   .+|..++|+|+.+.  +++.+..+.
T Consensus       224 L~~~l~d~---~vr~~a~~aL~~ig--~~~~~~~L~  254 (276)
T d1oyza_         224 LCDELKKN---TVYDDIIEAAGELG--DKTLLPVLD  254 (276)
T ss_dssp             HHHHHTSS---SCCHHHHHHHHHHC--CGGGHHHHH
T ss_pred             HHHHhCCh---HHHHHHHHHHHHcC--CHHHHHHHH
Confidence            88877644   58899999999885  444444443


No 17 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15  E-value=1.1e-10  Score=117.67  Aligned_cols=286  Identities=14%  Similarity=0.140  Sum_probs=173.5

Q ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCc-hhHHH
Q 016714           77 PSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTS-EHTRV  155 (384)
Q Consensus        77 ~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~-~~~~~  155 (384)
                      +.+.+.+.++++..+..|+.++..++.+. .+.....+ ..++|.++..+++++ +.++..|+|+|+.++.... .....
T Consensus       398 ~~l~~~l~s~~~~~reaa~~alg~i~eg~-~~~~~~~l-~~li~~l~~~l~d~~-~~Vr~~a~~~l~~~~~~~~~~~~~~  474 (888)
T d1qbkb_         398 PLLKELLFHHEWVVKESGILVLGAIAEGC-MQGMIPYL-PELIPHLIQCLSDKK-ALVRSITCWTLSRYAHWVVSQPPDT  474 (888)
T ss_dssp             HHHHHTTTSSSHHHHHHHHHHHHHHTTTS-HHHHTTTH-HHHHHHHHHHTTSSC-HHHHHHHHHHHHHTHHHHHSSCHHH
T ss_pred             HHHHHhhccchhHHHHHHHHHhhhhhhhH-HHHhcccc-hhhhHHHHHhccCCC-HHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            44445667888999999999999876432 11111111 235788899998888 9999999999998875211 11222


Q ss_pred             HHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCC-chhh---HHH--------------------------h-----
Q 016714          156 VIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSP-SCRD---LVL--------------------------S-----  200 (384)
Q Consensus       156 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~-~~~~---~i~--------------------------~-----  200 (384)
                      .. ..+++.++..+.++++.+++.|+++|.+++.... ....   .++                          +     
T Consensus       475 ~~-~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~al~~l~~~~~~~  553 (888)
T d1qbkb_         475 YL-KPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHH  553 (888)
T ss_dssp             HT-TTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hh-hhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhcc
Confidence            22 3578889999999999999999999999873211 0100   000                          0     


Q ss_pred             ---cC----ChHHHHHHhcc--cchh------------------------------------------------------
Q 016714          201 ---SG----ALMPLLAQLNE--HSKL------------------------------------------------------  217 (384)
Q Consensus       201 ---~g----~i~~L~~~l~~--~~~~------------------------------------------------------  217 (384)
                         ..    .++.++.....  ..+.                                                      
T Consensus       554 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  633 (888)
T d1qbkb_         554 LNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEA  633 (888)
T ss_dssp             GCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCC
T ss_pred             ccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence               00    00111111100  0000                                                      


Q ss_pred             ---HHHHHHHHHHhhhhcCCCCCChhhh--hchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHH
Q 016714          218 ---SMLRNATWTLSNFCRGKPPTPFEQV--KPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLV  292 (384)
Q Consensus       218 ---~~~~~a~~~L~~L~~~~~~~~~~~~--~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~  292 (384)
                         ++...++.++..+...-.......+  ..+++.+...+.+.+++++..+..+++.++...........+ .+++.+.
T Consensus       634 ~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llgdl~~~~~~~~~~~l~-~~~~~l~  712 (888)
T d1qbkb_         634 PDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIA-DFMPILG  712 (888)
T ss_dssp             CCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTGGGHH-HHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCChHHHHHHHHHHHHHHHhhhHHHHHHHH-HHHHHHH
Confidence               0001111111111111000001111  234556666777888999999999999888654443322222 3677888


Q ss_pred             HhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHHHHHhccCC-chhHHHHHHHHHHHHhcCCHHHHHHHH
Q 016714          293 ELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNH-KKSIKKEACWTISNITAGNRAQIQVHD  368 (384)
Q Consensus       293 ~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~-~~~v~~~a~~~L~nl~~~~~~~i~~l~  368 (384)
                      ..|.++...++..|++++|.|+....+.....+. .+++.|+.++.+++ ...+++.+|-+|+.++...++.+...+
T Consensus       713 ~~L~~~~~~v~~~a~~~ig~ia~~~~~~~~py~~-~il~~L~~il~~~~~~~~v~~n~~~~lgrl~~~~p~~~~~~l  788 (888)
T d1qbkb_         713 TNLNPEFISVCNNATWAIGEISIQMGIEMQPYIP-MVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPML  788 (888)
T ss_dssp             HTCCGGGHHHHHHHHHHHHHHHHHTGGGGGGGSH-HHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHCHHHHGGGG
T ss_pred             HHhCcCCHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHCHHHHHhhH
Confidence            8888888899999999999998654433332222 47888999998763 355889999999999987777654333


No 18 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08  E-value=2.4e-09  Score=98.36  Aligned_cols=275  Identities=17%  Similarity=0.180  Sum_probs=175.3

Q ss_pred             CHHHHHHHhcCC--CHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCC-ChHHHHHHHHHHHHHhcCCch
Q 016714           75 SIPSMVQGVWSE--DPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHD-MPQLQFEAAWALTNVASGTSE  151 (384)
Q Consensus        75 ~l~~lv~~l~s~--~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~~a~~~L~nl~~~~~~  151 (384)
                      .++.++..+.++  ++..+..++..+..+.... .+....-.-..+++.++..+.+++ +..++..|+.++.++......
T Consensus       128 ~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~  206 (458)
T d1ibrb_         128 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDI-DPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA  206 (458)
T ss_dssp             HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS-CGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHH
T ss_pred             hhHHHHHHHHhhcchHHHHHHHHHHHHHHHhhc-cchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhh
Confidence            467777777654  3566667778877765432 221111112335778888886543 378999999999998875433


Q ss_pred             hHH-HHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCch-hhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhh
Q 016714          152 HTR-VVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSC-RDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSN  229 (384)
Q Consensus       152 ~~~-~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~-~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~  229 (384)
                      ... ........+.+..++.+++++++..++.+|..++...+.. ...+ . ..+..++.....+.+.++...++..+..
T Consensus       207 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~a~~~l~~  284 (458)
T d1ibrb_         207 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYM-G-PALFAITIEAMKSDIDEVALQGIEFWSN  284 (458)
T ss_dssp             HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTT-T-TTHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHhHhhHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH-H-HHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence            221 1222235677788888899999999999999998654432 1111 1 1233333333356667777778877776


Q ss_pred             hhcCC----------------C-CCC----hhhhhchHHHHHHhhcc-------CCHhHHHHHHHHHHHhccCChHHHHH
Q 016714          230 FCRGK----------------P-PTP----FEQVKPALPILQRLIHL-------NDEEVLTDACWALSYLSDGPNDKIQA  281 (384)
Q Consensus       230 L~~~~----------------~-~~~----~~~~~~~~~~L~~lL~~-------~~~~i~~~a~~~l~~l~~~~~~~~~~  281 (384)
                      ++...                + ...    ......++|.+...+..       .+..++..+..++..++....+..  
T Consensus       285 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~--  362 (458)
T d1ibrb_         285 VCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI--  362 (458)
T ss_dssp             HHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTH--
T ss_pred             HHHHHHHHHHhhhhHHHhhhHHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhh--
Confidence            65310                0 000    01123444555555432       224577888888888775433221  


Q ss_pred             HHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCC-hHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          282 VIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGD-DAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       282 ~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~-~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                       . ..+++.+...+.++++.++..|+.+||.++.+. +...... -..+++.+...+.++ ++.||..|+|+|+.++.
T Consensus       363 -~-~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~-l~~i~~~l~~~l~d~-~~~VR~~a~~~l~~i~~  436 (458)
T d1ibrb_         363 -V-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPL-VIQAMPTLIELMKDP-SVVVRDTAAWTVGRICE  436 (458)
T ss_dssp             -H-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTT-TTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
T ss_pred             -h-hHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHH-HHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHH
Confidence             1 135678888899999999999999999998653 2222212 235889999999998 99999999999999975


No 19 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.08  E-value=2.1e-08  Score=95.80  Aligned_cols=265  Identities=16%  Similarity=0.164  Sum_probs=165.6

Q ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHH
Q 016714           75 SIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTR  154 (384)
Q Consensus        75 ~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~  154 (384)
                      +...+++++.+++...+.-+--.+..++..  ++..-.+    +++.+.+-|.+++ +.++..|+++|+++..  ++...
T Consensus        67 ~~~~vi~l~ss~~~~~Kr~gYL~l~~~~~~--~~el~~L----~iNtl~KDL~s~n-~~ir~lALr~L~~i~~--~~i~~  137 (584)
T d2vgla_          67 GHMEAVNLLSSNRYTEKQIGYLFISVLVNS--NSELIRL----INNAIKNDLASRN-PTFMGLALHCIANVGS--REMAE  137 (584)
T ss_dssp             CHHHHHHGGGCSCHHHHHHHHHHHHHSCCC--CHHHHHH----HHHHHHHHHHSCC-HHHHHHHHHHHHHHCC--HHHHH
T ss_pred             hHHHHHHHhCCCCHHHHHHHHHHHHHHcCC--CchHHHH----HHHHHHHHcCCCC-HHHHHHHHHHHHcCCC--HHHHH
Confidence            568889999999998888777777765432  2222222    4677888888888 9999999999999965  44433


Q ss_pred             HHHhcCChHHHHHhhc--CCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhc
Q 016714          155 VVIEHGAVPMFVQLLS--SGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCR  232 (384)
Q Consensus       155 ~i~~~g~i~~L~~lL~--~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~  232 (384)
                      .+     .+.+.+++.  ++++.+|..|+++++.+....|.   .....+.++.+..+| .+.++.+..++++++..++.
T Consensus       138 ~l-----~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd---~~~~~~~~~~L~~lL-~D~d~~V~~aAl~ll~eI~~  208 (584)
T d2vgla_         138 AF-----AGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPD---LVPMGDWTSRVVHLL-NDQHLGVVTAATSLITTLAQ  208 (584)
T ss_dssp             HH-----TTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGG---GCCCCSCHHHHHHHT-TCSCHHHHHHHHHHHHHHHH
T ss_pred             HH-----HHHHHHhhccCCCcHHHHHHHHHHHHHHHHhChh---hhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHH
Confidence            33     345555443  56789999999999999876653   233445788899988 67889999999999999886


Q ss_pred             CCCCCChhhhhchHHHHH----------------------------Hhhc----cCCHhHHH------------------
Q 016714          233 GKPPTPFEQVKPALPILQ----------------------------RLIH----LNDEEVLT------------------  262 (384)
Q Consensus       233 ~~~~~~~~~~~~~~~~L~----------------------------~lL~----~~~~~i~~------------------  262 (384)
                      ..|..........++.+.                            +++.    ..++.+..                  
T Consensus       209 ~~p~~~~~~~~~~i~~L~~ll~~~~~~~~~~~~~~~~~~~lq~~il~ll~~l~~~~~~~~~~~l~~~l~~Il~~~~~~~~  288 (584)
T d2vgla_         209 KNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPK  288 (584)
T ss_dssp             HCHHHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             hCHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhhcccHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHhhhccc
Confidence            543211111112222222                            2111    11222111                  


Q ss_pred             ---------------HHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHc
Q 016714          263 ---------------DACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDN  327 (384)
Q Consensus       263 ---------------~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~  327 (384)
                                     .++.++..+.. .+.     ....+++.+..+|.+.++.++..++.++..++......  .++..
T Consensus       289 ~~~~~~~~~~~aVl~e~i~~i~~~~~-~~~-----~~~~~i~~l~~lL~s~~~niry~aL~~L~~L~~~~~~~--~~~~~  360 (584)
T d2vgla_         289 SKKVQHSNAKNAVLFEAISLIIHHDS-EPN-----LLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSH--EAVKT  360 (584)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHCC-CHH-----HHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTTH--HHHHT
T ss_pred             cccHHhhhhHHHHHHHHHHHHHhcCC-CHH-----HHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHccCCCH--HHHHH
Confidence                           11111211111 000     01125677888999999999999999999998754321  12222


Q ss_pred             CchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHH
Q 016714          328 GVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHD  368 (384)
Q Consensus       328 g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~  368 (384)
                       ....++..+...++..++..+..+|.+++  +++.++.++
T Consensus       361 -~~~~il~~l~~~~~~~Ir~~aL~lL~~L~--n~~Ni~~Iv  398 (584)
T d2vgla_         361 -HIETVINALKTERDVSVRQRAVDLLYAMC--DRSNAQQIV  398 (584)
T ss_dssp             -THHHHHHHHTTCCCHHHHHHHHHHHHHHC--CHHHHHHHH
T ss_pred             -HHHHHHHhcccCchhHHHHHHHHHHHHhC--CHHHHHHHH
Confidence             34445555554437788898988888887  344444443


No 20 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08  E-value=5.2e-10  Score=112.63  Aligned_cols=234  Identities=17%  Similarity=0.163  Sum_probs=145.6

Q ss_pred             HHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCC-CchhhH
Q 016714          119 VPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDS-PSCRDL  197 (384)
Q Consensus       119 i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~-~~~~~~  197 (384)
                      ++.+.+.+.+++ +..++.|+.+|+.++.+..+.....+. .+++.|+..+.++++.++..++|+|+.++... +...+.
T Consensus       397 l~~l~~~l~s~~-~~~reaa~~alg~i~eg~~~~~~~~l~-~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~  474 (888)
T d1qbkb_         397 LPLLKELLFHHE-WVVKESGILVLGAIAEGCMQGMIPYLP-ELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDT  474 (888)
T ss_dssp             HHHHHHTTTSSS-HHHHHHHHHHHHHHTTTSHHHHTTTHH-HHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHHHSSCHHH
T ss_pred             HHHHHHhhccch-hHHHHHHHHHhhhhhhhHHHHhcccch-hhhHHHHHhccCCCHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            455556666777 899999999999999875544333332 46788999999999999999999999987421 111111


Q ss_pred             HHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHH--------------
Q 016714          198 VLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTD--------------  263 (384)
Q Consensus       198 i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~--------------  263 (384)
                      . -...++.++..+ .+.++.++..++++|.+++.............+++.+...+...+......              
T Consensus       475 ~-~~~~l~~ll~~l-~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~al~~l~~~~~~  552 (888)
T d1qbkb_         475 Y-LKPLMTELLKRI-LDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGH  552 (888)
T ss_dssp             H-TTTHHHHHHHHH-SSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHGG
T ss_pred             h-hhhhHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhc
Confidence            1 234677788777 666788999999999999875332222222333333333222211111111              


Q ss_pred             -------------------------------HHHHHHHhc----------------------------------------
Q 016714          264 -------------------------------ACWALSYLS----------------------------------------  272 (384)
Q Consensus       264 -------------------------------a~~~l~~l~----------------------------------------  272 (384)
                                                     ++.+++.++                                        
T Consensus       553 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  632 (888)
T d1qbkb_         553 HLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYE  632 (888)
T ss_dssp             GGCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSC
T ss_pred             cccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence                                           111111110                                        


Q ss_pred             ------------------cCCh-HHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHH
Q 016714          273 ------------------DGPN-DKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCL  333 (384)
Q Consensus       273 ------------------~~~~-~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L  333 (384)
                                        ..-. .....+....+++.+...+.+.++.++..|+.++|.++..........++ .+++.+
T Consensus       633 ~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llgdl~~~~~~~~~~~l~-~~~~~l  711 (888)
T d1qbkb_         633 APDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIA-DFMPIL  711 (888)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTGGGHH-HHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCChHHHHHHHHHHHHHHHhhhHHHHHHHH-HHHHHH
Confidence                              0000 00000111234555666677788889999999999998665544333333 367778


Q ss_pred             HHHhccCCchhHHHHHHHHHHHHhc
Q 016714          334 YQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       334 ~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      ...+.++ ...++..|+|+++.|+.
T Consensus       712 ~~~L~~~-~~~v~~~a~~~ig~ia~  735 (888)
T d1qbkb_         712 GTNLNPE-FISVCNNATWAIGEISI  735 (888)
T ss_dssp             HHTCCGG-GHHHHHHHHHHHHHHHH
T ss_pred             HHHhCcC-CHHHHHHHHHHHHHHHH
Confidence            8888877 88999999999999985


No 21 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05  E-value=6.6e-10  Score=115.26  Aligned_cols=271  Identities=14%  Similarity=0.138  Sum_probs=191.7

Q ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHH
Q 016714           76 IPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRV  155 (384)
Q Consensus        76 l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~  155 (384)
                      +..+++.+.+.|++.++.|+..|.+.+..+ ....+.-....+++.|+.+|++++ +++|..|+.||+.++..-++.   
T Consensus         5 ~~~ll~k~~~~D~d~R~ma~~dl~~~l~~~-~~~~~~~~~~~i~~~ll~~L~D~~-~~Vq~~A~k~l~~l~~~~~~~---   79 (1207)
T d1u6gc_           5 ISNLLEKMTSSDKDFRFMATNDLMTELQKD-SIKLDDDSERKVVKMILKLLEDKN-GEVQNLAVKCLGPLVSKVKEY---   79 (1207)
T ss_dssp             HHHHHHHTTCSSHHHHHHHHHHHHHHTSSS-CCSCCTTHHHHHHHHHHHHTTCSS-HHHHHHHHHHHHHHHTTSCHH---
T ss_pred             HHHHHHhcCCCCHhHHHHHHHHHHHHHhhc-ccccChHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHhCcHh---
Confidence            577888999999999999999999888654 222222222347899999999888 999999999999998754432   


Q ss_pred             HHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCC------chhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhh
Q 016714          156 VIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSP------SCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSN  229 (384)
Q Consensus       156 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~------~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~  229 (384)
                      .+ ...++.|+..+.+++...+..+..+|..+...-+      .....+ ....++.+...+....+..++..++.+|..
T Consensus        80 ~~-~~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~v~~~al~~l~~  157 (1207)
T d1u6gc_          80 QV-ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANV-CKKITGRLTSAIAKQEDVSVQLEALDIMAD  157 (1207)
T ss_dssp             HH-HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHH-HHHHHHHHHHHHSCCSCHHHHHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHHHH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence            12 2357888888888888888888888877653211      111111 112444555555555677788888888888


Q ss_pred             hhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhc-CCCChhhHHHHHH
Q 016714          230 FCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELL-MHPSATVLIPALR  308 (384)
Q Consensus       230 L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL-~~~~~~v~~~a~~  308 (384)
                      +....+..-......+++.+...+.+++..++..|+.+|+.++.......    -..+++.++..+ .+.+...+..++.
T Consensus       158 l~~~~g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~----~~~~~~~ll~~l~~~~~~~~~~~~~~  233 (1207)
T d1u6gc_         158 MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIV----FVDLIEHLLSELSKNDSMSTTRTYIQ  233 (1207)
T ss_dssp             HHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC--------CTTHHHHHHHHHHHTCSSCSCTTHHH
T ss_pred             HHHHhhHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHccCCCHHHHHHHHH
Confidence            87765544444456788889999999999999999999999987654321    123456666655 3455667777888


Q ss_pred             HHHHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhcC
Q 016714          309 TVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITAG  359 (384)
Q Consensus       309 ~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~  359 (384)
                      +++.++...+......+ ..+++.+...+... ++.+|+.+..++..++..
T Consensus       234 ~l~~l~~~~~~~~~~~l-~~i~~~l~~~l~~~-~~~~r~~al~~l~~l~~~  282 (1207)
T d1u6gc_         234 CIAAISRQAGHRIGEYL-EKIIPLVVKFCNVD-DDELREYCIQAFESFVRR  282 (1207)
T ss_dssp             HHHHHHHHSSGGGTTSC-TTHHHHHHHHHSSC-CTTTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcchhhHHHH-HHHHHHHHHHhcCc-cHHHHHHHHHHHHHHHHh
Confidence            99988765443322111 36788899999888 889999999999998863


No 22 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86  E-value=7.8e-09  Score=94.84  Aligned_cols=235  Identities=19%  Similarity=0.201  Sum_probs=155.7

Q ss_pred             HHHHHHHhcCC--CHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhH
Q 016714           76 IPSMVQGVWSE--DPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHT  153 (384)
Q Consensus        76 l~~lv~~l~s~--~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~  153 (384)
                      ++.++..+.++  +..++..|+.++..+..................+.+..++.+++ ++++..++++|..++...+...
T Consensus       173 l~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~l~~i~~~~~~~~  251 (458)
T d1ibrb_         173 LTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPD-TRVRVAALQNLVKIMSLYYQYM  251 (458)
T ss_dssp             HHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSS-HHHHHHHHHHHHHHHHHCGGGC
T ss_pred             HHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHHHHhcCCC-HHHHHHHHHHHHHHHHHhHHHH
Confidence            56666667654  46788889999988865321111112223345677788888877 9999999999999987655543


Q ss_pred             HHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCc---------------------hhhHHHhcCChHHHHHHhc
Q 016714          154 RVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPS---------------------CRDLVLSSGALMPLLAQLN  212 (384)
Q Consensus       154 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~---------------------~~~~i~~~g~i~~L~~~l~  212 (384)
                      ...+.....+.+...+.+++++++..++.++..++.....                     ...... ...++.+...+.
T Consensus       252 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~  330 (458)
T d1ibrb_         252 ETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGAL-QYLVPILTQTLT  330 (458)
T ss_dssp             TTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHH-HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhhHHHHHHHHHHHHHH-HHHhhhHHhhhh
Confidence            3333333345556667788899999999998888632100                     000001 112233333332


Q ss_pred             c------cchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCCh-HHHHHHHHc
Q 016714          213 E------HSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPN-DKIQAVIEA  285 (384)
Q Consensus       213 ~------~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~-~~~~~~~~~  285 (384)
                      .      ..+..++..+..++..++...+.   .....+++.+...+.++++.++..++.+|+.++.+.. ..... .-.
T Consensus       331 ~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~---~~~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~-~l~  406 (458)
T d1ibrb_         331 KQDENDDDDDWNPCKAAGVCLMLLATCCED---DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKP-LVI  406 (458)
T ss_dssp             CCCSSCCTTCCSHHHHHHHHHHHHHHHTTT---THHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCT-TTT
T ss_pred             cchhhhccccccHHHHHHHHHHHHHHhccH---hhhhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHH-HHH
Confidence            1      11234777888888888875432   2345677888889999999999999999999987542 22111 123


Q ss_pred             CChHHHHHhcCCCChhhHHHHHHHHHHhhcC
Q 016714          286 GVCPRLVELLMHPSATVLIPALRTVGNIVTG  316 (384)
Q Consensus       286 g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~  316 (384)
                      .+++.++..+.++++.||..|+++||.++..
T Consensus       407 ~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~  437 (458)
T d1ibrb_         407 QAMPTLIELMKDPSVVVRDTAAWTVGRICEL  437 (458)
T ss_dssp             THHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999753


No 23 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.78  E-value=3.5e-07  Score=87.12  Aligned_cols=255  Identities=14%  Similarity=0.092  Sum_probs=165.7

Q ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhc--CCCChHHHHHHHHHHHHHhcCCchh
Q 016714           75 SIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLG--RHDMPQLQFEAAWALTNVASGTSEH  152 (384)
Q Consensus        75 ~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~--~~~~~~~~~~a~~~L~nl~~~~~~~  152 (384)
                      .+..+.+.|+++++..+-.|++.+.++..    +....    .+++.+.+++.  +++ |-+|..|++++..+....++.
T Consensus       104 ~iNtl~KDL~s~n~~ir~lALr~L~~i~~----~~i~~----~l~~~V~k~l~~~d~~-p~VRk~A~l~l~ki~~~~pd~  174 (584)
T d2vgla_         104 INNAIKNDLASRNPTFMGLALHCIANVGS----REMAE----AFAGEIPKILVAGDTM-DSVKQSAALCLLRLYRTSPDL  174 (584)
T ss_dssp             HHHHHHHHHHSCCHHHHHHHHHHHHHHCC----HHHHH----HHTTHHHHHHHCSSSC-HHHHHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHcCCC----HHHHH----HHHHHHHHhhccCCCc-HHHHHHHHHHHHHHHHhChhh
Confidence            46677778889999999999999988743    22221    12455555554  344 889999999999998755542


Q ss_pred             HHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChH---------------------------
Q 016714          153 TRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALM---------------------------  205 (384)
Q Consensus       153 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~---------------------------  205 (384)
                         ....+.++.+..+|.++++.++..|++++..++...+........ ..+.                           
T Consensus       175 ---~~~~~~~~~L~~lL~D~d~~V~~aAl~ll~eI~~~~p~~~~~~~~-~~i~~L~~ll~~~~~~~~~~~~~~~~~~~lq  250 (584)
T d2vgla_         175 ---VPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVS-LAVSRLSRIVTSASTDLQDYTYYFVPAPWLS  250 (584)
T ss_dssp             ---CCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHTTHHH-HHHHHHHHHHHCCSSSCSTTEETTEESHHHH
T ss_pred             ---hhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHHhhcccchHHHHHhhcccHHHH
Confidence               234567899999999999999999999999998655432111110 0111                           


Q ss_pred             -HHHHHhc---ccchhHHHH---------------------------------HHHHHHhhhhcCCCCCChhhhhchHHH
Q 016714          206 -PLLAQLN---EHSKLSMLR---------------------------------NATWTLSNFCRGKPPTPFEQVKPALPI  248 (384)
Q Consensus       206 -~L~~~l~---~~~~~~~~~---------------------------------~a~~~L~~L~~~~~~~~~~~~~~~~~~  248 (384)
                       .++..+.   ...+.....                                 .++.++..+     .........+++.
T Consensus       251 ~~il~ll~~l~~~~~~~~~~~l~~~l~~Il~~~~~~~~~~~~~~~~~~~aVl~e~i~~i~~~-----~~~~~~~~~~i~~  325 (584)
T d2vgla_         251 VKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHH-----DSEPNLLVRACNQ  325 (584)
T ss_dssp             HHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHHHH-----CCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHhhhccccccHHhhhhHHHHHHHHHHHHHhc-----CCCHHHHHHHHHH
Confidence             1222221   111111111                                 111111111     1112233456778


Q ss_pred             HHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhc-CCCChhhHHHHHHHHHHhhcCChHHHHHHHHc
Q 016714          249 LQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELL-MHPSATVLIPALRTVGNIVTGDDAQTQFVIDN  327 (384)
Q Consensus       249 L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL-~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~  327 (384)
                      +..+|.+.+++++..++.++..++......  .++.. ....++..+ .+++..++..++.++.+++.  ++....    
T Consensus       326 l~~lL~s~~~niry~aL~~L~~L~~~~~~~--~~~~~-~~~~il~~l~~~~~~~Ir~~aL~lL~~L~n--~~Ni~~----  396 (584)
T d2vgla_         326 LGQFLQHRETNLRYLALESMCTLASSEFSH--EAVKT-HIETVINALKTERDVSVRQRAVDLLYAMCD--RSNAQQ----  396 (584)
T ss_dssp             HHHHSSCSCHHHHHHHHHHHHHHTTCTTTH--HHHHT-THHHHHHHHTTCCCHHHHHHHHHHHHHHCC--HHHHHH----
T ss_pred             HHHHhcCCCcchHHHHHHHHHHHHccCCCH--HHHHH-HHHHHHHhcccCchhHHHHHHHHHHHHhCC--HHHHHH----
Confidence            888999999999999999999998754321  12222 244455555 46677899999999999984  444443    


Q ss_pred             CchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          328 GVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       328 g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                       +++.|...+.+. +.+++++++++++.++.
T Consensus       397 -Iv~eL~~yl~~~-d~~~k~~~i~~I~~la~  425 (584)
T d2vgla_         397 -IVAEMLSYLETA-DYSIREEIVLKVAILAE  425 (584)
T ss_dssp             -HHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHhhC-CHHHHHHHHHHHHHHHH
Confidence             456688888888 89999999999999985


No 24 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.72  E-value=2.6e-07  Score=83.04  Aligned_cols=275  Identities=13%  Similarity=0.070  Sum_probs=178.6

Q ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHH-HcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHH
Q 016714           78 SMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVI-KAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVV  156 (384)
Q Consensus        78 ~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~-~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i  156 (384)
                      .+...+.+++.-....+...+..+++.. .......- .......+-.+...++ .+.+..++.++..+... ++.|..+
T Consensus       126 ~f~~~l~~~d~~~~~~s~~i~~ll~~~~-~~~~~~~e~l~~~~~~l~~l~~~~~-~~~~~i~v~~lq~llr~-~~~R~~f  202 (477)
T d1ho8a_         126 LFDVSLKGDFQTVLISGFNVVSLLVQNG-LHNVKLVEKLLKNNNLINILQNIEQ-MDTCYVCIRLLQELAVI-PEYRDVI  202 (477)
T ss_dssp             HHHHCSCSSHHHHHHHHHHHHHHHTSTT-TCCHHHHHHHHHCHHHHHHHHCTTC-HHHHHHHHHHHHHHHTS-HHHHHHH
T ss_pred             HHHHhccCchhHHHHHHHHHHHHHHhcc-ccccchHHHHHHhhHHHHHhhcccc-cchHHHHHHHHHHHhcC-ccHHHHH
Confidence            3444455566666667777777776653 33332211 1112333333435556 78899999999998884 8888887


Q ss_pred             Hh--cCChHHHHHhhcC-----------------CCHHHHHHHHHHHHhhhCCCCchhhHHHhc--CChHHHHHHhcccc
Q 016714          157 IE--HGAVPMFVQLLSS-----------------GSDDVREQAVWALGNVAGDSPSCRDLVLSS--GALMPLLAQLNEHS  215 (384)
Q Consensus       157 ~~--~g~i~~L~~lL~~-----------------~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~--g~i~~L~~~l~~~~  215 (384)
                      ..  ...++.|+..|..                 ....++-+++.+++-++.+.+ ....+.+.  +.++.++.++....
T Consensus       203 w~~~~~~~~~l~~il~~a~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~lWlLSF~~~-~~~~l~~~~~~~i~~l~~i~~~s~  281 (477)
T d1ho8a_         203 WLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPV-FANELVQKYLSDFLDLLKLVKITI  281 (477)
T ss_dssp             HTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHH-HHHHHHTTSHHHHHHHHHHHHHCC
T ss_pred             HHcccchHHHHHHHHHHHhcccccchhhcccCCCccHHHHHHHHHHHHHHHcCHH-HHHHHHHhhhHHHHHHHHHHHhhh
Confidence            54  3456666666642                 124678888999998887554 44444444  34888889887788


Q ss_pred             hhHHHHHHHHHHhhhhcCCCCCCh-----hhh-hchHHHHHHhhcc---CCHhHHHHHHHHHHH-------hccC-----
Q 016714          216 KLSMLRNATWTLSNFCRGKPPTPF-----EQV-KPALPILQRLIHL---NDEEVLTDACWALSY-------LSDG-----  274 (384)
Q Consensus       216 ~~~~~~~a~~~L~~L~~~~~~~~~-----~~~-~~~~~~L~~lL~~---~~~~i~~~a~~~l~~-------l~~~-----  274 (384)
                      .+.+.+-++.+|.|++........     ..+ .++++. +..|..   .|+++..+.-..-..       ++..     
T Consensus       282 KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~~v~~~~l~~-l~~L~~r~~~Dedl~edl~~L~~~L~~~~k~lTsfd~Y~~  360 (477)
T d1ho8a_         282 KEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALPT-VQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVA  360 (477)
T ss_dssp             SHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHHH-HHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcchhHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence            899999999999999986422111     112 334444 444532   467665543322111       1111     


Q ss_pred             ---------Ch-HHHHHHHH----------cCChHHHHHhcC----------CCChhhHHHHHHHHHHhhcCChHHHHHH
Q 016714          275 ---------PN-DKIQAVIE----------AGVCPRLVELLM----------HPSATVLIPALRTVGNIVTGDDAQTQFV  324 (384)
Q Consensus       275 ---------~~-~~~~~~~~----------~g~~~~L~~lL~----------~~~~~v~~~a~~~l~nl~~~~~~~~~~i  324 (384)
                               ++ ..-+.+..          ..++..|+++|.          +.++.+..-||.=||.++...|.....+
T Consensus       361 Ev~Sg~L~WSP~H~se~FW~EN~~kf~e~~~~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~~P~gr~il  440 (477)
T d1ho8a_         361 ELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVL  440 (477)
T ss_dssp             HHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHH
T ss_pred             HHhcCCCCCCCCcCChhHHHHHHHhhcccchHHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHHCcchhHHH
Confidence                     11 11111211          135788999985          2366778889999999999999998888


Q ss_pred             HHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          325 IDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       325 ~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      -+.|+=..++.++.++ +++||.+|..|+.-+..
T Consensus       441 ~~lg~K~~vM~Lm~h~-d~~Vr~eAL~avQklm~  473 (477)
T d1ho8a_         441 DKTGGKADIMELLNHS-DSRVKYEALKATQAIIG  473 (477)
T ss_dssp             HHHSHHHHHHHHTSCS-SHHHHHHHHHHHHHHHH
T ss_pred             HHcCcHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
Confidence            8899999999999999 99999999999987764


No 25 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55  E-value=5.3e-07  Score=89.29  Aligned_cols=277  Identities=19%  Similarity=0.205  Sum_probs=175.6

Q ss_pred             HHHHHHHhcCCC--HHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhH
Q 016714           76 IPSMVQGVWSED--PALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHT  153 (384)
Q Consensus        76 l~~lv~~l~s~~--~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~  153 (384)
                      ++.++..+.+++  ..++..++..+......-...........-+++.+...+.+++ ++++..++.+|..++...++..
T Consensus       174 l~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~-~~v~~~~~~~l~~l~~~~~~~~  252 (876)
T d1qgra_         174 LTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPD-TRVRVAALQNLVKIMSLYYQYM  252 (876)
T ss_dssp             HHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSS-HHHHHHHHHHHHHHHHHSGGGC
T ss_pred             HHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHhHHHH
Confidence            556666666543  5778888888877765321000001112234666777777777 9999999999999988767666


Q ss_pred             HHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchh----------------h----HHHhcCChHHHHHHhcc
Q 016714          154 RVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCR----------------D----LVLSSGALMPLLAQLNE  213 (384)
Q Consensus       154 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~----------------~----~i~~~g~i~~L~~~l~~  213 (384)
                      ...+.....+.+...+.+.+++++..++..+..++.......                .    .......++.+...+..
T Consensus       253 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  332 (876)
T d1qgra_         253 ETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTK  332 (876)
T ss_dssp             HHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Confidence            666655566777777888889999888888777763211100                0    00011122333333321


Q ss_pred             c------chhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCC
Q 016714          214 H------SKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGV  287 (384)
Q Consensus       214 ~------~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~  287 (384)
                      .      .+..+...+..++..++...+.   .....+++.+...+.++++..+..++.+++.+..+.......-.-..+
T Consensus       333 ~~~~~~~~~~~~~~~a~~~l~~l~~~~~~---~~~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~  409 (876)
T d1qgra_         333 QDENDDDDDWNPCKAAGVCLMLLATCCED---DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQA  409 (876)
T ss_dssp             CCSSCCTTCCCHHHHHHHHHHHHHHHHGG---GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHH
T ss_pred             cccccccccchHHHHHHHHHHHHHHHhhh---hhhhhhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Confidence            1      1223566666777666654321   233556677778888899999999999999998764432222223457


Q ss_pred             hHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHH-HHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          288 CPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQ-FVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       288 ~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~-~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      ++.+...+.++++.++..++++++.++...+.... ...-..+++.+...+.+  ++.++..++|++.+++.
T Consensus       410 ~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~v~~~~~~~l~~l~~  479 (876)
T d1qgra_         410 MPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSA--EPRVASNVCWAFSSLAE  479 (876)
T ss_dssp             HHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHHHTTS--CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCccHHHHHHHHHHHHHHHHcchhhhhHHHhhhHHHHHHHHhcC--CHHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999854332110 00001234555555543  57899999999999874


No 26 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55  E-value=2e-07  Score=96.20  Aligned_cols=233  Identities=14%  Similarity=0.170  Sum_probs=155.8

Q ss_pred             CHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhH
Q 016714          118 VVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDL  197 (384)
Q Consensus       118 ~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~  197 (384)
                      +++.+...+....++.++.+++.+|+.+............ ..+++.|+..+.+++..++..|+.+|+.++...+..   
T Consensus       131 l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~~~-~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~---  206 (1207)
T d1u6gc_         131 ITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH-PSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI---  206 (1207)
T ss_dssp             HHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTH-HHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC------
T ss_pred             HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHhhHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHH---
Confidence            4555666565555488999999999887653221111111 135677778888899999999999999998654321   


Q ss_pred             HHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChH
Q 016714          198 VLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPND  277 (384)
Q Consensus       198 i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~  277 (384)
                      . -...++.++..+..+.+....+.++.++..+++..+..-......++|.+...+..++++++..++.++..++...+.
T Consensus       207 ~-~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~~  285 (1207)
T d1u6gc_         207 V-FVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPK  285 (1207)
T ss_dssp             --CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTC
T ss_pred             H-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhChh
Confidence            1 123567777777566666667778888888887654433344578899999999999999999999988887754332


Q ss_pred             HHHHHHHcCChHHHHHhc-------------------------------------CCCChhhHHHHHHHHHHhhcCChHH
Q 016714          278 KIQAVIEAGVCPRLVELL-------------------------------------MHPSATVLIPALRTVGNIVTGDDAQ  320 (384)
Q Consensus       278 ~~~~~~~~g~~~~L~~lL-------------------------------------~~~~~~v~~~a~~~l~nl~~~~~~~  320 (384)
                      ...... ..+++.+...+                                     .+.+..++..++.+++.++...++.
T Consensus       286 ~~~~~~-~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~~l~~~~~~~  364 (1207)
T d1u6gc_         286 EVYPHV-STIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEM  364 (1207)
T ss_dssp             CCHHHH-HHHHHHHTTCCCCC------------------------------------CTTHHHHHHHHHHHHHHTTCCTT
T ss_pred             hhhhhH-HHHHHHHHHHHhcCcchhhhhHHHHHhhhhhhccchhhhhHHHHHhhhhhhhHHHHHHHHHHHHhHHHHHHHH
Confidence            111100 01111111111                                     1234578889999999998776655


Q ss_pred             HHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          321 TQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       321 ~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      ...+. ..+++.+...+.+. ++.+|..+..++..+..
T Consensus       365 l~~~~-~~~~~~L~~~l~d~-~~~vr~~~~~~l~~l~~  400 (1207)
T d1u6gc_         365 LPEFY-KTVSPALISRFKER-EENVKADVFHAYLSLLK  400 (1207)
T ss_dssp             HHHHH-TTTHHHHHSTTSCS-SSHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHHHHHhcCC-chHHHHHHHHHHHHHHH
Confidence            54443 35889999999887 88999999888887763


No 27 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.54  E-value=1.3e-06  Score=86.11  Aligned_cols=275  Identities=13%  Similarity=0.097  Sum_probs=165.7

Q ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHhcCCCC-CcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHH
Q 016714           77 PSMVQGVWSEDPALQLEATTQFRKLLSIERS-PPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRV  155 (384)
Q Consensus        77 ~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~-~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~  155 (384)
                      ..++..+.++++.++..++.++..++..+-+ ..+.     .+++.|++.+.+++...++..|+.+|+.++.........
T Consensus        98 ~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p~~~wp-----eli~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~  172 (861)
T d2bpta1          98 TNALTALVSIEPRIANAAAQLIAAIADIELPHGAWP-----ELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQA  172 (861)
T ss_dssp             HHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCH-----HHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSST
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCcCchH-----HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            5566777888899999999988887653201 1122     357888888887665678888999999998643332221


Q ss_pred             HHh--cCChHHHHHhhc--CCCHHHHHHHHHHHHhhhCCCCchhh-HHHhcCChHHHHHHhcccchhHHHHHHHHHHhhh
Q 016714          156 VIE--HGAVPMFVQLLS--SGSDDVREQAVWALGNVAGDSPSCRD-LVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNF  230 (384)
Q Consensus       156 i~~--~g~i~~L~~lL~--~~~~~v~~~a~~~L~nl~~~~~~~~~-~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L  230 (384)
                      +..  ...++.++..+.  ..+..++..++.+++++....+..-. .......++.+...+ .+.+++++..++.++..+
T Consensus       173 ~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~l~~i  251 (861)
T d2bpta1         173 LVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAT-QAEDIEVQAAAFGCLCKI  251 (861)
T ss_dssp             TGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHH-TCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHHHHh-cCCCHHHHHHHHHHHHHH
Confidence            111  012333344333  35689999999999998754332111 111122455566666 677888999999999988


Q ss_pred             hcCCCCCChhhhhchHH-HHHHhhccCCHhHHHHHHHHHHHhccCChHHHHH----------------------------
Q 016714          231 CRGKPPTPFEQVKPALP-ILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQA----------------------------  281 (384)
Q Consensus       231 ~~~~~~~~~~~~~~~~~-~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~----------------------------  281 (384)
                      +...+..-.......+. .+.....+.++.++..++..+..++.........                            
T Consensus       252 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~l~~  331 (861)
T d2bpta1         252 MSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLN  331 (861)
T ss_dssp             HHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            87544332333333333 2334445666777766665555443211000000                            


Q ss_pred             -----------------------------HHHcCChH----HHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcC
Q 016714          282 -----------------------------VIEAGVCP----RLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNG  328 (384)
Q Consensus       282 -----------------------------~~~~g~~~----~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g  328 (384)
                                                   .....+++    .+...+.+.+...+..++.+++.++.+.......-.-..
T Consensus       332 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~  411 (861)
T d2bpta1         332 LLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQ  411 (861)
T ss_dssp             HTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHH
T ss_pred             HHHHhhccccchhHHHHHHHHHHHHHHHhhcchhhhhhhcchhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Confidence                                         00011122    222334556667778888888888776543322222234


Q ss_pred             chHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          329 VLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       329 ~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      +++.+...+.++ ++.+|..++|+++.++.
T Consensus       412 ~l~~l~~~l~d~-~~~vr~~a~~~l~~l~~  440 (861)
T d2bpta1         412 ALPSILNLMNDQ-SLQVKETTAWCIGRIAD  440 (861)
T ss_dssp             HHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCc-chhhhhHHHHHHHHHHH
Confidence            788899999888 89999999999999874


No 28 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.50  E-value=1.7e-08  Score=73.98  Aligned_cols=109  Identities=20%  Similarity=0.250  Sum_probs=88.6

Q ss_pred             hcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHH
Q 016714          169 LSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPI  248 (384)
Q Consensus       169 L~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~  248 (384)
                      |.++++.++..|+++|+.+..            ..+++|+..| .+.++.++..++++|.++..          ...+|.
T Consensus         1 L~D~~~~VR~~A~~aL~~~~~------------~~~~~L~~~l-~d~~~~vR~~a~~~L~~~~~----------~~~~~~   57 (111)
T d1te4a_           1 MADENKWVRRDVSTALSRMGD------------EAFEPLLESL-SNEDWRIRGAAAWIIGNFQD----------ERAVEP   57 (111)
T ss_dssp             CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGG-GCSCHHHHHHHHHHHGGGCS----------HHHHHH
T ss_pred             CCCcCHHHHHHHHHHHHHhCH------------HHHHHHHHHH-cCCCHHHHHHHHHHHHhcch----------hhhHHH
Confidence            456777888888888887621            2567888888 67889999999999987653          357899


Q ss_pred             HHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHH
Q 016714          249 LQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVG  311 (384)
Q Consensus       249 L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~  311 (384)
                      |..+|.++++.++..++++|+.+..  +         +.++.|..++.++++.++..|+.+|.
T Consensus        58 L~~~l~d~~~~VR~~a~~aL~~i~~--~---------~~~~~L~~ll~d~~~~vr~~A~~aL~  109 (111)
T d1te4a_          58 LIKLLEDDSGFVRSGAARSLEQIGG--E---------RVRAAMEKLAETGTGFARKVAVNYLE  109 (111)
T ss_dssp             HHHHHHHCCTHHHHHHHHHHHHHCS--H---------HHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred             HHhhhccchhHHHHHHHHHHHHhCc--c---------chHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            9999999999999999999998742  1         34678888999999999999988874


No 29 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.48  E-value=1.5e-08  Score=74.33  Aligned_cols=109  Identities=18%  Similarity=0.223  Sum_probs=88.6

Q ss_pred             hcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChH
Q 016714          126 LGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALM  205 (384)
Q Consensus       126 L~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~  205 (384)
                      |++++ +.+|..|+++|+.+..            .+++.|+..|.++++.++..++++|+++..           .+.++
T Consensus         1 L~D~~-~~VR~~A~~aL~~~~~------------~~~~~L~~~l~d~~~~vR~~a~~~L~~~~~-----------~~~~~   56 (111)
T d1te4a_           1 MADEN-KWVRRDVSTALSRMGD------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQD-----------ERAVE   56 (111)
T ss_dssp             CCSSC-CCSSSSCCSSTTSCSS------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGCS-----------HHHHH
T ss_pred             CCCcC-HHHHHHHHHHHHHhCH------------HHHHHHHHHHcCCCHHHHHHHHHHHHhcch-----------hhhHH
Confidence            34555 7888888888876532            367889999999999999999999998742           12567


Q ss_pred             HHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHH
Q 016714          206 PLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALS  269 (384)
Q Consensus       206 ~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~  269 (384)
                      .|+.+| .+.++.++..++++|..+..          ...+|.|..++.++++.++..|+.+|.
T Consensus        57 ~L~~~l-~d~~~~VR~~a~~aL~~i~~----------~~~~~~L~~ll~d~~~~vr~~A~~aL~  109 (111)
T d1te4a_          57 PLIKLL-EDDSGFVRSGAARSLEQIGG----------ERVRAAMEKLAETGTGFARKVAVNYLE  109 (111)
T ss_dssp             HHHHHH-HHCCTHHHHHHHHHHHHHCS----------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred             HHHhhh-ccchhHHHHHHHHHHHHhCc----------cchHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            888988 67889999999999998743          367888999999999999999988764


No 30 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.47  E-value=1.1e-05  Score=79.09  Aligned_cols=268  Identities=12%  Similarity=0.055  Sum_probs=171.2

Q ss_pred             HHHH-HHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCC-ChHHHHHHHHHHHHHhcCCchhHH
Q 016714           77 PSMV-QGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHD-MPQLQFEAAWALTNVASGTSEHTR  154 (384)
Q Consensus        77 ~~lv-~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~~a~~~L~nl~~~~~~~~~  154 (384)
                      ..++ ..+.+.|+.++..|-..|.++...+  +       .+.+..|.+.+.+.+ ++.+|..|+-.|.|..........
T Consensus         7 ~~~L~~~~~s~d~~~r~~Ae~~L~~~~~~~--~-------~~~~~~l~~il~~~~~~~~~r~~A~i~lkn~i~~~~~~~~   77 (861)
T d2bpta1           7 AQLLENSILSPDQNIRLTSETQLKKLSNDN--F-------LQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKT   77 (861)
T ss_dssp             HHHHHHHHHCSSHHHHHHHHHHHHHHHHHC--H-------HHHHHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHH
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHhcC--c-------hHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhhcccchhh
Confidence            3444 4467899999999999998775421  1       135777888886533 378899999999887653322111


Q ss_pred             HH--------H----hcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCC-CchhhHHHhcCChHHHHHHhcccchhHHHH
Q 016714          155 VV--------I----EHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDS-PSCRDLVLSSGALMPLLAQLNEHSKLSMLR  221 (384)
Q Consensus       155 ~i--------~----~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~-~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~  221 (384)
                      ..        +    ...+-..++..+.++++.++..++.+++.++... +..+  .  ...++.|+..+....+...+.
T Consensus        78 ~~~~~~~~~~i~~~~~~~ik~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p~~~--w--peli~~L~~~~~s~~~~~~~~  153 (861)
T d2bpta1          78 QQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGA--W--PELMKIMVDNTGAEQPENVKR  153 (861)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTC--C--HHHHHHHHHHTSTTSCHHHHH
T ss_pred             hhHHhhhHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCcCc--h--HHHHHHHHHHhcCCCcHHHHH
Confidence            10        0    0112355677778889999999999999987421 1100  0  014556666664445566777


Q ss_pred             HHHHHHhhhhcCCCCCCh---hhhhchHHHHHHhhcc--CCHhHHHHHHHHHHHhccCChHHHH-HHHHcCChHHHHHhc
Q 016714          222 NATWTLSNFCRGKPPTPF---EQVKPALPILQRLIHL--NDEEVLTDACWALSYLSDGPNDKIQ-AVIEAGVCPRLVELL  295 (384)
Q Consensus       222 ~a~~~L~~L~~~~~~~~~---~~~~~~~~~L~~lL~~--~~~~i~~~a~~~l~~l~~~~~~~~~-~~~~~g~~~~L~~lL  295 (384)
                      .++.+|..+|...+....   .....+++.+...+.+  .+..++..++.++.++...-..... ......+++.+...+
T Consensus       154 ~al~~l~~i~e~~~~~~~~~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~  233 (861)
T d2bpta1         154 ASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAT  233 (861)
T ss_dssp             HHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHHHHh
Confidence            888999999876432222   2224455555555543  4578999999999988765443221 112234567788888


Q ss_pred             CCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          296 MHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       296 ~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      .++++.++..++.++..++...++.....+..-+...+.....+. ++.++..++-.+..++.
T Consensus       234 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~-~~~v~~~~~~~l~~l~~  295 (861)
T d2bpta1         234 QAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSP-NDKVASMTVEFWSTICE  295 (861)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCS-SHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cHHHHHHHHHHHHHHHH
Confidence            999999999999999999865444333223222223334444555 88899998888887764


No 31 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47  E-value=5e-06  Score=82.10  Aligned_cols=276  Identities=16%  Similarity=0.182  Sum_probs=168.4

Q ss_pred             CHHHHHHHhcCCC--HHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCC-ChHHHHHHHHHHHHHhcCCch
Q 016714           75 SIPSMVQGVWSED--PALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHD-MPQLQFEAAWALTNVASGTSE  151 (384)
Q Consensus        75 ~l~~lv~~l~s~~--~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~~a~~~L~nl~~~~~~  151 (384)
                      .++.+++.+.+++  ...+..++.++..++..- .+..-.-.-..+++.++..+.+++ +..++..++.++.+.......
T Consensus       129 li~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~-~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~  207 (876)
T d1qgra_         129 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDI-DPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA  207 (876)
T ss_dssp             HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS-CHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHH
T ss_pred             HHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhh
Confidence            4788888887654  566777888888775421 111111112346788888886543 368899999999887653222


Q ss_pred             hHH-HHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhh
Q 016714          152 HTR-VVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNF  230 (384)
Q Consensus       152 ~~~-~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L  230 (384)
                      ... .....-.++.+...+.+++++++..++.+|..++...+..-...+.......+...+ .+.+.++...++..+..+
T Consensus       208 ~~~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~i  286 (876)
T d1qgra_         208 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAM-KSDIDEVALQGIEFWSNV  286 (876)
T ss_dssp             HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHH-TCSSHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHH
Confidence            111 111122466777788889999999999999999865543222222222333334444 445555666555555544


Q ss_pred             hcC---------------C-CC-CCh----hhhhchHHHHHHhhccC-------CHhHHHHHHHHHHHhccCChHHHHHH
Q 016714          231 CRG---------------K-PP-TPF----EQVKPALPILQRLIHLN-------DEEVLTDACWALSYLSDGPNDKIQAV  282 (384)
Q Consensus       231 ~~~---------------~-~~-~~~----~~~~~~~~~L~~lL~~~-------~~~i~~~a~~~l~~l~~~~~~~~~~~  282 (384)
                      +..               . +. ...    .....++|.+...+...       +..++..+..++..++.......   
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~---  363 (876)
T d1qgra_         287 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI---  363 (876)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG---
T ss_pred             HHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhhh---
Confidence            431               0 11 111    11234445555554321       23467777777777664322211   


Q ss_pred             HHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCCh-HHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc
Q 016714          283 IEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDD-AQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA  358 (384)
Q Consensus       283 ~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~-~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  358 (384)
                      + ..+++.+...+.+++...+..++..++.+..+.. ...... -..+++.+...+.++ ++.++..|+|+++.++.
T Consensus       364 ~-~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~l~d~-~~~vr~~a~~~l~~~~~  437 (876)
T d1qgra_         364 V-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPL-VIQAMPTLIELMKDP-SVVVRDTAAWTVGRICE  437 (876)
T ss_dssp             H-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHH-HHHHHHHHHHHHTCS-SHHHHHHHHHHHHHHHH
T ss_pred             h-hhhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHH-HHHHHHHHHHhhcCC-ccHHHHHHHHHHHHHHH
Confidence            1 1235667777788889999999999999987644 333322 235788899999988 89999999999999885


No 32 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.31  E-value=1.9e-05  Score=70.77  Aligned_cols=228  Identities=16%  Similarity=0.174  Sum_probs=156.4

Q ss_pred             cCCCHHHHHHHHHHHHHHhcCCCCCcHHHHH--HcCCHHHHHHhhcC----------------CCChHHHHHHHHHHHHH
Q 016714           84 WSEDPALQLEATTQFRKLLSIERSPPIDEVI--KAGVVPRFVEFLGR----------------HDMPQLQFEAAWALTNV  145 (384)
Q Consensus        84 ~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~--~~g~i~~Lv~lL~~----------------~~~~~~~~~a~~~L~nl  145 (384)
                      .+++...+..|++++..++..  .+.+..+.  +...++.|++.|..                +...+++++++.|+.-+
T Consensus       175 ~~~~~~~~~i~v~~lq~llr~--~~~R~~fw~~~~~~~~~l~~il~~a~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~lWlL  252 (477)
T d1ho8a_         175 NIEQMDTCYVCIRLLQELAVI--PEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLL  252 (477)
T ss_dssp             CTTCHHHHHHHHHHHHHHHTS--HHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHhcC--ccHHHHHHHcccchHHHHHHHHHHHhcccccchhhcccCCCccHHHHHHHHHHHHHH
Confidence            567788888899999888763  34444443  34556666666642                11158899999999999


Q ss_pred             hcCCchhHHHHHhc--CChHHHHHhhc-CCCHHHHHHHHHHHHhhhCCCCc-----hhhHHHhcCChHHHHHHhccc--c
Q 016714          146 ASGTSEHTRVVIEH--GAVPMFVQLLS-SGSDDVREQAVWALGNVAGDSPS-----CRDLVLSSGALMPLLAQLNEH--S  215 (384)
Q Consensus       146 ~~~~~~~~~~i~~~--g~i~~L~~lL~-~~~~~v~~~a~~~L~nl~~~~~~-----~~~~i~~~g~i~~L~~~l~~~--~  215 (384)
                      +. +++....+.+.  +.++.|+.+++ +..+++...++.+|.|++.....     +...++..++ .+++..|...  .
T Consensus       253 SF-~~~~~~~l~~~~~~~i~~l~~i~~~s~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~~v~~~~-l~~l~~L~~r~~~  330 (477)
T d1ho8a_         253 TF-NPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNA-LPTVQSLSERKYS  330 (477)
T ss_dssp             TT-SHHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCH-HHHHHHHHSSCCS
T ss_pred             Hc-CHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcch-hHHHHHHhcCCCC
Confidence            98 47777777765  34888888886 47789999999999999864322     2233344444 4556666332  3


Q ss_pred             hhHHHHHHHHH---------------------HhhhhcCCCCCChh------------hhhchHHHHHHhhc--------
Q 016714          216 KLSMLRNATWT---------------------LSNFCRGKPPTPFE------------QVKPALPILQRLIH--------  254 (384)
Q Consensus       216 ~~~~~~~a~~~---------------------L~~L~~~~~~~~~~------------~~~~~~~~L~~lL~--------  254 (384)
                      |+++....-..                     .+--.+..|....+            ....++..|+.+|.        
T Consensus       331 Dedl~edl~~L~~~L~~~~k~lTsfd~Y~~Ev~Sg~L~WSP~H~se~FW~EN~~kf~e~~~~llk~L~~lL~~~~~~~~~  410 (477)
T d1ho8a_         331 DEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDV  410 (477)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHhcCCCCCCCCcCChhHHHHHHHhhcccchHHHHHHHHHHhhccccccc
Confidence            55544332221                     11111222221111            11356778888885        


Q ss_pred             --cCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhc
Q 016714          255 --LNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVT  315 (384)
Q Consensus       255 --~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~  315 (384)
                        +.|+.++.-||.=|+.++.+.+.....+-+.|+=..+++++.|+++.|+..|+.|++-+..
T Consensus       411 ~~s~D~~~lAVAc~DiGefvr~~P~gr~il~~lg~K~~vM~Lm~h~d~~Vr~eAL~avQklm~  473 (477)
T d1ho8a_         411 NAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAIIG  473 (477)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCSSHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcceeehhhhhHHHHHHHCcchhHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence              3478889999999999999888777777788999999999999999999999999998754


No 33 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.57  E-value=0.0013  Score=55.20  Aligned_cols=211  Identities=14%  Similarity=0.121  Sum_probs=149.9

Q ss_pred             HHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchh----hHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhh
Q 016714          155 VVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCR----DLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNF  230 (384)
Q Consensus       155 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~----~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L  230 (384)
                      .+...+.+..|+..|..-+-+.+..+..+++++.......+    +.+...  .+.|..++....++++.-.+...|...
T Consensus        64 e~~~~d~l~~Li~~L~~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~--~eil~~L~~gye~~eiAl~~G~mLREc  141 (330)
T d1upka_          64 ELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQ--QNILFMLLKGYESPEIALNCGIMLREC  141 (330)
T ss_dssp             HHHHHSHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTC--THHHHHHHHGGGSTTTHHHHHHHHHHH
T ss_pred             HHHHhChHHHHHHhCCCCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcC--HHHHHHHHhhcCCcchhhhhhHHHHHH
Confidence            34456788889999988888999999999999986544333    334432  234444443445667777777777777


Q ss_pred             hcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHc---CChHHHHHhcCCCChhhHHHHH
Q 016714          231 CRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEA---GVCPRLVELLMHPSATVLIPAL  307 (384)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~---g~~~~L~~lL~~~~~~v~~~a~  307 (384)
                      .+...-.......+.+-.+.++++.++-++..+|..++..+..........++..   .++.....+|.+++.-.+..++
T Consensus       142 ik~e~lak~iL~s~~f~~fF~yv~~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~~LL~s~NYVtrRqSl  221 (330)
T d1upka_         142 IRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSL  221 (330)
T ss_dssp             HTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHH
T ss_pred             HhhHHHHHHHHccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHHHHhcCCchHHHHHHH
Confidence            7764333333346667778888899999999999999988777666555555554   3567778899999999999999


Q ss_pred             HHHHHhhcCCh--HH-HHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc--CCHHHHHHHH
Q 016714          308 RTVGNIVTGDD--AQ-TQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA--GNRAQIQVHD  368 (384)
Q Consensus       308 ~~l~nl~~~~~--~~-~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~--~~~~~i~~l~  368 (384)
                      ..||.+.....  .. ..++-+..-+..++.+|.+. +..++-+|--++--+++  ..+..|..++
T Consensus       222 KLLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~-sk~Iq~EAFhVFKvFVANpnKp~~I~~IL  286 (330)
T d1upka_         222 KLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDK-SRNIQFEAFHVFKVFVANPNKTQPILDIL  286 (330)
T ss_dssp             HHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHCSSCCHHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHhcCc-hhhHHHHhhhHhhhhhcCCCCCHHHHHHH
Confidence            99999986432  22 22333345688899999998 89999999999998888  3334444443


No 34 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.25  E-value=0.012  Score=49.29  Aligned_cols=242  Identities=13%  Similarity=0.150  Sum_probs=164.9

Q ss_pred             HHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhH----HHHHhc-CChHHHHHhhcCCCHHHHHHHHHHHHh
Q 016714          112 EVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHT----RVVIEH-GAVPMFVQLLSSGSDDVREQAVWALGN  186 (384)
Q Consensus       112 ~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~----~~i~~~-g~i~~L~~lL~~~~~~v~~~a~~~L~n  186 (384)
                      .+...+++..|+..|..-+ -+-+..++.+++++.......+    +.+... .++..|+...  +++++.-.|-..|.-
T Consensus        64 e~~~~d~l~~Li~~L~~L~-fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gy--e~~eiAl~~G~mLRE  140 (330)
T d1upka_          64 ELYNSGLLSTLVADLQLID-FEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGY--ESPEIALNCGIMLRE  140 (330)
T ss_dssp             HHHHHSHHHHHHHTGGGSC-HHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGG--GSTTTHHHHHHHHHH
T ss_pred             HHHHhChHHHHHHhCCCCC-CchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhc--CCcchhhhhhHHHHH
Confidence            4556788999999998877 7899999999999987544433    333331 2334444433  345565566666666


Q ss_pred             hhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCCCCChhhh----hchHHHHHHhhccCCHhHHH
Q 016714          187 VAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQV----KPALPILQRLIHLNDEEVLT  262 (384)
Q Consensus       187 l~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~----~~~~~~L~~lL~~~~~~i~~  262 (384)
                      .+.... ....++....+..+.+.+ +.++-++...|..++..+....+....+..    ...+..+..+|.+++--++.
T Consensus       141 cik~e~-lak~iL~s~~f~~fF~yv-~~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~~LL~s~NYVtrR  218 (330)
T d1upka_         141 CIRHEP-LAKIILWSEQFYDFFRYV-EMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKR  218 (330)
T ss_dssp             HHTSHH-HHHHHHHSGGGGHHHHHT-TCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHH
T ss_pred             HHhhHH-HHHHHHccHHHHHHHHHH-cCCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHHHHhcCCchHHHH
Confidence            665554 556677777888888888 777788889999998887775433222222    45666778899999999999


Q ss_pred             HHHHHHHHhccCChHHH---HHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCC---hHHHHHHHHc--CchHHHH
Q 016714          263 DACWALSYLSDGPNDKI---QAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGD---DAQTQFVIDN--GVLPCLY  334 (384)
Q Consensus       263 ~a~~~l~~l~~~~~~~~---~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~---~~~~~~i~~~--g~l~~L~  334 (384)
                      .++..|+.+........   ..+-+..-+..++.+|.+.+..++..|..++--.++..   +.....+...  .++..|.
T Consensus       219 qSlKLLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~sk~Iq~EAFhVFKvFVANpnKp~~I~~IL~~Nr~kLl~fl~  298 (330)
T d1upka_         219 QSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLS  298 (330)
T ss_dssp             HHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHhcCchhhHHHHhhhHhhhhhcCCCCCHHHHHHHHHhHHHHHHHHH
Confidence            99999999886543221   12223355888999999999999999999998888753   2344434432  4566666


Q ss_pred             HHhccC-CchhHHHHHHHHHHHHhc
Q 016714          335 QLLTQN-HKKSIKKEACWTISNITA  358 (384)
Q Consensus       335 ~ll~~~-~~~~v~~~a~~~L~nl~~  358 (384)
                      +...+. ++.....+=...+..|..
T Consensus       299 ~f~~d~~~DeqF~~EK~~lI~~I~~  323 (330)
T d1upka_         299 KFQNDRTEDEQFNDEKTYLVKQIRD  323 (330)
T ss_dssp             HTTTTC-CCSHHHHHHHHHHHHHHT
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHh
Confidence            665432 356666666666666654


No 35 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=96.62  E-value=0.002  Score=52.43  Aligned_cols=41  Identities=17%  Similarity=0.180  Sum_probs=27.5

Q ss_pred             hhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHH
Q 016714          125 FLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWAL  184 (384)
Q Consensus       125 lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L  184 (384)
                      +|.++. .+++..|++                  .-.+..|..+++++++.|+..+++.|
T Consensus        50 ~l~~p~-~e~Ra~Aa~------------------~a~~~~L~~Ll~D~d~~VR~~AA~~L   90 (233)
T d1lrva_          50 YLADPF-WERRAIAVR------------------YSPVEALTPLIRDSDEVVRRAVAYRL   90 (233)
T ss_dssp             GTTCSS-HHHHHHHHT------------------TSCGGGGGGGTTCSSHHHHHHHHTTS
T ss_pred             HhcCCc-HHHHHHHHh------------------cCCHHHHHHHhcCCCHHHHHHHHHHc
Confidence            556666 677765543                  23366777788888888888887654


No 36 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.24  E-value=0.098  Score=44.78  Aligned_cols=157  Identities=13%  Similarity=0.104  Sum_probs=102.3

Q ss_pred             HHHHHhcCCC-HHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcC----C------CChHHHHHHHHHHHHHh
Q 016714           78 SMVQGVWSED-PALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGR----H------DMPQLQFEAAWALTNVA  146 (384)
Q Consensus        78 ~lv~~l~s~~-~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~----~------~~~~~~~~a~~~L~nl~  146 (384)
                      ..+..|++.- .+.....+..|+--+..++...++.+ ..+++..|+.+|..    +      .+...+.++..||..+.
T Consensus         6 ~yv~~l~~~~~~~~~~~~L~sL~v~Lrt~~~sWv~~F-~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkalm   84 (343)
T d2bnxa1           6 MYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM   84 (343)
T ss_dssp             HHHHHHTSCCCHHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCCccHHHHHHHHHHHHHhcCCchHHHHH-HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHh
Confidence            4556665543 23334455666555554323334555 45667778777741    1      11568899999999998


Q ss_pred             cCCchhHHHH-HhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCC--CchhhHHH----------hcCChHHHHHHhcc
Q 016714          147 SGTSEHTRVV-IEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDS--PSCRDLVL----------SSGALMPLLAQLNE  213 (384)
Q Consensus       147 ~~~~~~~~~i-~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~--~~~~~~i~----------~~g~i~~L~~~l~~  213 (384)
                      .. ......+ -..+++..++..|.++++.++..|+..|..+|...  +.....++          +.+-+.++++.+..
T Consensus        85 n~-~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~~e~~RF~~lv~~l~~  163 (343)
T d2bnxa1          85 NN-KFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKS  163 (343)
T ss_dssp             SS-HHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTST
T ss_pred             cc-HHHHHHHHcChHHHHHHHHccCCCchHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHhcCCCcHHHHHHHHhc
Confidence            85 4444444 45678999999999999999999999999998532  22222222          34557788888866


Q ss_pred             cchhHHHHHHHHHHhhhhcCCCC
Q 016714          214 HSKLSMLRNATWTLSNFCRGKPP  236 (384)
Q Consensus       214 ~~~~~~~~~a~~~L~~L~~~~~~  236 (384)
                      ..+.+....++..+-.++.+.+.
T Consensus       164 ~~~~ey~~a~m~lIN~li~~~~d  186 (343)
T d2bnxa1         164 GTSIALKVGCLQLINALITPAEE  186 (343)
T ss_dssp             TSCHHHHHHHHHHHHHHHTTCSC
T ss_pred             cccHHHHHHHHHHHHHHHcCccc
Confidence            66677777777777777766444


No 37 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=96.23  E-value=0.0018  Score=52.79  Aligned_cols=23  Identities=17%  Similarity=0.290  Sum_probs=16.7

Q ss_pred             HHHHHHhhcCCCChHHHHHHHHHH
Q 016714          119 VPRFVEFLGRHDMPQLQFEAAWAL  142 (384)
Q Consensus       119 i~~Lv~lL~~~~~~~~~~~a~~~L  142 (384)
                      +..|..++++++ +.++..+++.|
T Consensus        68 ~~~L~~Ll~D~d-~~VR~~AA~~L   90 (233)
T d1lrva_          68 VEALTPLIRDSD-EVVRRAVAYRL   90 (233)
T ss_dssp             GGGGGGGTTCSS-HHHHHHHHTTS
T ss_pred             HHHHHHHhcCCC-HHHHHHHHHHc
Confidence            556777778777 88888887643


No 38 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.49  E-value=0.081  Score=51.73  Aligned_cols=287  Identities=10%  Similarity=0.088  Sum_probs=137.0

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcH-------HHHH--HcCCHHHHHHhhcCCCChHHH----HHHHH
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPI-------DEVI--KAGVVPRFVEFLGRHDMPQLQ----FEAAW  140 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~-------~~~~--~~g~i~~Lv~lL~~~~~~~~~----~~a~~  140 (384)
                      ..++.++..|++++..++..|++++..++........       ..+.  -..++..++..+.........    ..+..
T Consensus       496 ~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~ll~  575 (959)
T d1wa5c_         496 ELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMR  575 (959)
T ss_dssp             HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHH
T ss_pred             HHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccccchhhccHHHHHhhHHHHHHHHHHHHHhhcchhhhHHHHHHHHH
Confidence            3577788888888999999999999988754211100       0000  012344555555433211111    22444


Q ss_pred             HHHHHhcCCchhHHHHHhcCChHHHHHhh----cC-CCHHHHHHHHHHHHhhhCC-CCchhhHHHhcCChHHHHHHhccc
Q 016714          141 ALTNVASGTSEHTRVVIEHGAVPMFVQLL----SS-GSDDVREQAVWALGNVAGD-SPSCRDLVLSSGALMPLLAQLNEH  214 (384)
Q Consensus       141 ~L~nl~~~~~~~~~~i~~~g~i~~L~~lL----~~-~~~~v~~~a~~~L~nl~~~-~~~~~~~i~~~g~i~~L~~~l~~~  214 (384)
                      ++..+.....+....... .+++.|...+    .+ .++.....+..+|+.+... ++.....+ ....++.+...+ ..
T Consensus       576 ~l~~ii~~~~~~~~~~~~-~i~~~l~~~~~~~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~l-~~~l~p~i~~~~-~~  652 (959)
T d1wa5c_         576 SIFRVLQTSEDSIQPLFP-QLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLL-VDSMMPTFLTVF-SE  652 (959)
T ss_dssp             HHHHHHHHHTTTTGGGHH-HHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHH-HHHHHHHHHHHH-HT
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHhcCchhHHHH-HHHHHHHHHHHH-hc
Confidence            554443311111111111 1233443333    22 4566777777788877643 23222222 233566666666 44


Q ss_pred             chhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHh
Q 016714          215 SKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVEL  294 (384)
Q Consensus       215 ~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~l  294 (384)
                      ...++...+...+..+....+... ......++.+..............+..++.+......+....  ..+++..+..+
T Consensus       653 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~l~~~~~~  729 (959)
T d1wa5c_         653 DIQEFIPYVFQIIAFVVEQSATIP-ESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPD--LVPVLGIFQRL  729 (959)
T ss_dssp             TCTTTHHHHHHHHHHHHHHCSSCC-TTTGGGHHHHTSGGGGCCTTTHHHHHHHHHHHHHHHGGGCSC--SHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHhCCCcc-HHHHHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHhCHHhhcc--hHHHHHHHHHH
Confidence            444455555555555554432211 122334444433222222223333333333322211110000  01234444555


Q ss_pred             cCCCChhhHHHHHHHHHHhhcCCh-HHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhc-CCHHHHHHHHh
Q 016714          295 LMHPSATVLIPALRTVGNIVTGDD-AQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITA-GNRAQIQVHDS  369 (384)
Q Consensus       295 L~~~~~~v~~~a~~~l~nl~~~~~-~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~-~~~~~i~~l~~  369 (384)
                      +.....  ...++..++.+....+ ......+. .++..+...+.+...+.+....+|.++.++. .++...-.+++
T Consensus       730 l~~~~~--~~~~~~ll~~ii~~~~~~~~~~~l~-~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  803 (959)
T d1wa5c_         730 IASKAY--EVHGFDLLEHIMLLIDMNRLRPYIK-QIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFID  803 (959)
T ss_dssp             HTCTTT--HHHHHHHHHHHHHHSCHHHHGGGHH-HHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HCCCcc--hHHHHHHHHHHHHHCchhhhHhHHH-HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            554432  3557777777764433 22222221 3555666667666567788889999998886 35555444444


No 39 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=95.31  E-value=0.69  Score=39.09  Aligned_cols=204  Identities=17%  Similarity=0.174  Sum_probs=122.0

Q ss_pred             CHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcC----CCHHHHHHHHHHHHhhhC----
Q 016714          118 VVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSS----GSDDVREQAVWALGNVAG----  189 (384)
Q Consensus       118 ~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~----~~~~v~~~a~~~L~nl~~----  189 (384)
                      .+..+.+++.++. ..- .+|...|..++... .-..     ..+..+..++.+    .++.++..++.++|+++.    
T Consensus        89 a~~~i~~~I~~~~-ls~-~ea~~~l~~l~~~~-~Pt~-----~~l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c~  160 (336)
T d1lsha1          89 ALLFLKRTLASEQ-LTS-AEATQIVASTLSNQ-QATR-----ESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCA  160 (336)
T ss_dssp             HHHHHHHHHHTTC-SCH-HHHHHHHHHHHHTC-CCCH-----HHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCC-CCH-HHHHHHHHHHhccC-CCCH-----HHHHHHHHHHcCcccccchhHHHHHHHHHHHHHHHHhc
Confidence            3455677776554 222 23334444444321 1111     134455556654    578899999999998863    


Q ss_pred             CCCchhhHHHhcCChHHHHHHhc---ccchhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcc-------CCHh
Q 016714          190 DSPSCRDLVLSSGALMPLLAQLN---EHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHL-------NDEE  259 (384)
Q Consensus       190 ~~~~~~~~i~~~g~i~~L~~~l~---~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~-------~~~~  259 (384)
                      ..+.+.+     ..++.+...+.   ...+.+-...++.+|.|+-..          ..++.|..++..       .+..
T Consensus       161 ~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~p----------~~i~~l~~~l~~~~~~~~~~~~~  225 (336)
T d1lsha1         161 NTVSCPD-----ELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQP----------NSIKKIQRFLPGQGKSLDEYSTR  225 (336)
T ss_dssp             TCSSCCG-----GGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCG----------GGHHHHHTTSTTSSSCCCCSCHH
T ss_pred             CCCCCcH-----HHHHHHHHHHHHhhcccchHHHHHHHHHHhccCCH----------hHHHHHHHHhcccccccccccHH
Confidence            3332322     23445555542   334455566778889988642          456777777743       2467


Q ss_pred             HHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhc--CCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHHHHHh
Q 016714          260 VLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELL--MHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLL  337 (384)
Q Consensus       260 i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL--~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll  337 (384)
                      ++..|+|++..+....+..+.        +.+.+++  ...++++|..|+..|-..   .|..       ..+..+...+
T Consensus       226 vR~aAi~Alr~~~~~~p~~v~--------~~l~~i~~n~~e~~EvRiaA~~~lm~t---~P~~-------~~l~~i~~~l  287 (336)
T d1lsha1         226 VQAEAIMALRNIAKRDPRKVQ--------EIVLPIFLNVAIKSELRIRSCIVFFES---KPSV-------ALVSMVAVRL  287 (336)
T ss_dssp             HHHHHHHTTTTGGGTCHHHHH--------HHHHHHHHCTTSCHHHHHHHHHHHHHT---CCCH-------HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcHHHH--------HHHHHHHcCCCCChHHHHHHHHHHHhc---CCCH-------HHHHHHHHHH
Confidence            999999999999887664433        3344444  345678888888877542   2211       1344566677


Q ss_pred             ccCCchhHHHHHHHHHHHHhc-CCHH
Q 016714          338 TQNHKKSIKKEACWTISNITA-GNRA  362 (384)
Q Consensus       338 ~~~~~~~v~~~a~~~L~nl~~-~~~~  362 (384)
                      ....+..|+....-.|.|++. .+|.
T Consensus       288 ~~E~~~QV~sfv~S~l~~la~s~~P~  313 (336)
T d1lsha1         288 RREPNLQVASFVYSQMRSLSRSSNPE  313 (336)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTTCCSGG
T ss_pred             HhCcHHHHHHHHHHHHHHHHhCCCcc
Confidence            665577787777778888887 3443


No 40 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.29  E-value=0.48  Score=45.95  Aligned_cols=178  Identities=8%  Similarity=0.062  Sum_probs=99.2

Q ss_pred             hHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCch--------hhHHHh--c
Q 016714          132 PQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSC--------RDLVLS--S  201 (384)
Q Consensus       132 ~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~--------~~~i~~--~  201 (384)
                      +.++..++|+++..+....  ....  ..+++.++.+|.+++..++..|++++..++......        .+.+..  .
T Consensus       472 ~~lr~~~~~~i~~~~~~~~--~~~~--~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~p~l~  547 (959)
T d1wa5c_         472 IILRVDAIKYIYTFRNQLT--KAQL--IELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTE  547 (959)
T ss_dssp             HHHHHHHHHHHHHTGGGSC--HHHH--HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHH
T ss_pred             HHHHHHHHHHHHHHHhhcc--HHHH--HHHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccccchhhccHHHHHhhHH
Confidence            6789999999999876422  2222  247899999999999999999999999998532211        011100  0


Q ss_pred             CChHHHHHHhcccchh----HHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhc----c-CCHhHHHHHHHHHHHhc
Q 016714          202 GALMPLLAQLNEHSKL----SMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIH----L-NDEEVLTDACWALSYLS  272 (384)
Q Consensus       202 g~i~~L~~~l~~~~~~----~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~----~-~~~~i~~~a~~~l~~l~  272 (384)
                      ..+..++..+......    .....++.++..+....+.........+++.+...+.    + .++.....+..+++.+.
T Consensus       548 ~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~e~l~~l~  627 (959)
T d1wa5c_         548 ILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAIL  627 (959)
T ss_dssp             HHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHH
Confidence            1233444444222211    1122355555554433222223333445555554442    2 24667777777777776


Q ss_pred             cCC-hHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhh
Q 016714          273 DGP-NDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIV  314 (384)
Q Consensus       273 ~~~-~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~  314 (384)
                      ... ++.... ....++|.+...+..........++..++.+.
T Consensus       628 ~~~~~~~~~~-l~~~l~p~i~~~~~~~~~~~~~~~~~l~~~~~  669 (959)
T d1wa5c_         628 NYTQRQNLPL-LVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVV  669 (959)
T ss_dssp             HTSCGGGHHH-HHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHH
T ss_pred             HhcCchhHHH-HHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence            432 222222 33445677777776655556666666655543


No 41 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=94.77  E-value=0.99  Score=38.08  Aligned_cols=168  Identities=18%  Similarity=0.183  Sum_probs=98.7

Q ss_pred             ChHHHHHhhcCCC--HHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhccc---chhHHHHHHHHHHh----hhh
Q 016714          161 AVPMFVQLLSSGS--DDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEH---SKLSMLRNATWTLS----NFC  231 (384)
Q Consensus       161 ~i~~L~~lL~~~~--~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~---~~~~~~~~a~~~L~----~L~  231 (384)
                      ++..+..++.+..  .......++.|+....  | ..+      .+..+..++...   .++.+...+..+++    ..|
T Consensus        89 a~~~i~~~I~~~~ls~~ea~~~l~~l~~~~~--P-t~~------~l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c  159 (336)
T d1lsha1          89 ALLFLKRTLASEQLTSAEATQIVASTLSNQQ--A-TRE------SLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYC  159 (336)
T ss_dssp             HHHHHHHHHHTTCSCHHHHHHHHHHHHHTCC--C-CHH------HHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHhccCC--C-CHH------HHHHHHHHHcCcccccchhHHHHHHHHHHHHHHHHh
Confidence            4555666665533  3333444455544332  2 112      344555665322   23445455544444    445


Q ss_pred             cCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCC-------CChhhHH
Q 016714          232 RGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMH-------PSATVLI  304 (384)
Q Consensus       232 ~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~-------~~~~v~~  304 (384)
                      ...+......+..+...+.+.....+.+-..-++.+|+|+-.  +         +.++.|..++..       .+..++.
T Consensus       160 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~--p---------~~i~~l~~~l~~~~~~~~~~~~~vR~  228 (336)
T d1lsha1         160 ANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ--P---------NSIKKIQRFLPGQGKSLDEYSTRVQA  228 (336)
T ss_dssp             TTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC--G---------GGHHHHHTTSTTSSSCCCCSCHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCC--H---------hHHHHHHHHhcccccccccccHHHHH
Confidence            444444455555666666677777787777888999999742  2         346777777743       2467899


Q ss_pred             HHHHHHHHhhcCChHHHHHHHHcCchHHHHHHhcc-CCchhHHHHHHHHHHHH
Q 016714          305 PALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTQ-NHKKSIKKEACWTISNI  356 (384)
Q Consensus       305 ~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~ll~~-~~~~~v~~~a~~~L~nl  356 (384)
                      .|++++.++....+.....        .+..++.+ ..++++|-.|..+|...
T Consensus       229 aAi~Alr~~~~~~p~~v~~--------~l~~i~~n~~e~~EvRiaA~~~lm~t  273 (336)
T d1lsha1         229 EAIMALRNIAKRDPRKVQE--------IVLPIFLNVAIKSELRIRSCIVFFES  273 (336)
T ss_dssp             HHHHTTTTGGGTCHHHHHH--------HHHHHHHCTTSCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhhcCcHHHHH--------HHHHHHcCCCCChHHHHHHHHHHHhc
Confidence            9999999998876654332        33444433 33678888888777553


No 42 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.36  E-value=2.7  Score=35.33  Aligned_cols=168  Identities=12%  Similarity=0.162  Sum_probs=102.2

Q ss_pred             cCCchhHHHHHhcCChHHHHHhhcC-----------CCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccc
Q 016714          147 SGTSEHTRVVIEHGAVPMFVQLLSS-----------GSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHS  215 (384)
Q Consensus       147 ~~~~~~~~~i~~~g~i~~L~~lL~~-----------~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~  215 (384)
                      .........+ ..+|+..|+.+|..           .+......++.||..+..........+...+.+..+...+ .++
T Consensus        33 t~~~sWv~~F-~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L-~s~  110 (343)
T d2bnxa1          33 NNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAM-DPA  110 (343)
T ss_dssp             HSCHHHHHHH-HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTC-CTT
T ss_pred             cCCchHHHHH-HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhccHHHHHHHHcChHHHHHHHHcc-CCC
Confidence            3334455555 34566667776631           1356777889999998877766666666777888888888 677


Q ss_pred             hhHHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhc
Q 016714          216 KLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELL  295 (384)
Q Consensus       216 ~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL  295 (384)
                      ...++..++..|+.+|.......      +.+               .++.++.+..        ..-+.+-+..++..|
T Consensus       111 ~~~tr~~a~elL~~lc~~~~~~~------g~~---------------~vL~Al~~~~--------~~~e~~RF~~lv~~l  161 (343)
T d2bnxa1         111 VPNMMIDAAKLLSALCILPQPED------MNE---------------RVLEAMTERA--------EMDEVERFQPLLDGL  161 (343)
T ss_dssp             SHHHHHHHHHHHHHHHTCCSSTT------HHH---------------HHHHHHHHHH--------HHHTSCTTHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHhccCCCc------hHH---------------HHHHHHHHHH--------HhcCCCcHHHHHHHH
Confidence            78888899999999987642111      111               1122222111        123345566777777


Q ss_pred             CCC-ChhhHHHHHHHHHHhhcCChH------HHHHHHHcCchHHHHHHhccCCchhHH
Q 016714          296 MHP-SATVLIPALRTVGNIVTGDDA------QTQFVIDNGVLPCLYQLLTQNHKKSIK  346 (384)
Q Consensus       296 ~~~-~~~v~~~a~~~l~nl~~~~~~------~~~~i~~~g~l~~L~~ll~~~~~~~v~  346 (384)
                      ... +...+..++..|..++.+.++      ....+...|+.+.+-.+=... ++.+.
T Consensus       162 ~~~~~~ey~~a~m~lIN~li~~~~dl~~R~~lR~E~~~~Gl~~il~~l~~~~-~~~L~  218 (343)
T d2bnxa1         162 KSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIE-NEDMK  218 (343)
T ss_dssp             STTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHHHTTCC-CHHHH
T ss_pred             hccccHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHCChHHHHHHHHccC-ChHHH
Confidence            544 456777777777777766542      234556677777666554443 44433


No 43 
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.94  E-value=5.6  Score=33.19  Aligned_cols=190  Identities=11%  Similarity=0.079  Sum_probs=109.1

Q ss_pred             HHhcCChHHHHHhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcCCC
Q 016714          156 VIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKP  235 (384)
Q Consensus       156 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~~~  235 (384)
                      .++...+..|+.++.++++.-|......|..+-+.....|..+... +-..+.+.+.......-...+++.+..+..+-.
T Consensus       129 ~id~~Fi~~Ll~lf~S~D~rER~~lk~~l~~iy~kf~~~R~~Ir~~-i~~if~~fi~e~~~~~gI~elLeil~sii~gf~  207 (343)
T d2jaka1         129 YIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQ-INNIFYRFIYETEHHNGIAELLEILGSIINGFA  207 (343)
T ss_dssp             TSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHH-HHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCC
T ss_pred             hCCHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHhhcCCCCccHHHHHHHHHHHHHhcc
Confidence            3334457788899999999999999999999987777777765543 455666666444444445566666666666643


Q ss_pred             CC-ChhhhhchHHHHHHhhccCC-HhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHh
Q 016714          236 PT-PFEQVKPALPILQRLIHLND-EEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNI  313 (384)
Q Consensus       236 ~~-~~~~~~~~~~~L~~lL~~~~-~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl  313 (384)
                      .+ ..+...-....++.+..+.. ...-..-..++......++.....+     +..|++.=-..++.=...-+.-|..+
T Consensus       208 ~plkeeh~~f~~~vllPLhk~~~~~~y~~qL~~~v~~f~~kDp~l~~~~-----i~~llk~WP~t~~~Kev~FL~el~~i  282 (343)
T d2jaka1         208 LPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPV-----VMALLKYWPKTHSPKEVMFLNELEEI  282 (343)
T ss_dssp             SSCCHHHHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHH-----HHHHHHSSCSSCCTTHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHhcCchhHHHH-----HHHHHHhCCCCCchHHHHHHHHHHHH
Confidence            33 22222333344555544433 2233334444444444444333222     33344333223333344556666666


Q ss_pred             hcC-ChHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHH
Q 016714          314 VTG-DDAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTI  353 (384)
Q Consensus       314 ~~~-~~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L  353 (384)
                      ... .+...+.+.. .++..+...+.++ ...|.+.|....
T Consensus       283 l~~~~~~~f~~~~~-~lf~~la~ci~S~-h~qVAErAl~~w  321 (343)
T d2jaka1         283 LDVIEPSEFVKIME-PLFRQLAKCVSSP-HFQVAERALYYW  321 (343)
T ss_dssp             HHTCCHHHHHHHHH-HHHHHHHHHHTCS-SHHHHHHHHGGG
T ss_pred             HHhCCHHHHHHHHH-HHHHHHHHHhCCC-cHHHHHHHHHHH
Confidence            544 3444444333 3677788888888 888888876554


No 44 
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.91  E-value=4.5  Score=33.76  Aligned_cols=76  Identities=12%  Similarity=0.128  Sum_probs=50.7

Q ss_pred             HHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHHHhcCChHHHHHhhcC-CCHHHHHHHHHHHHhhhCC
Q 016714          113 VIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSS-GSDDVREQAVWALGNVAGD  190 (384)
Q Consensus       113 ~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~lL~~-~~~~v~~~a~~~L~nl~~~  190 (384)
                      .++...+..|+.++.++| +.-|.....+|..+-+.....+..+.+ .+...+.+++.. ....-...+++.++.+..+
T Consensus       129 ~id~~Fi~~Ll~lf~S~D-~rER~~lk~~l~~iy~kf~~~R~~Ir~-~i~~if~~fi~e~~~~~gI~elLeil~sii~g  205 (343)
T d2jaka1         129 YIDQKFVLQLLELFDSED-PRERDFLKTTLHRIYGKFLGLRAYIRK-QINNIFYRFIYETEHHNGIAELLEILGSIING  205 (343)
T ss_dssp             TSCHHHHHHHHHHTTCSC-HHHHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHT
T ss_pred             hCCHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHhhcCCCCccHHHHHHHHHHHHHh
Confidence            344456788889988988 888888888888887666666766655 344556666543 3333445566677766543


No 45 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=74.62  E-value=1  Score=32.72  Aligned_cols=74  Identities=12%  Similarity=0.112  Sum_probs=52.9

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhc
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVAS  147 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~  147 (384)
                      .++..+.+.+++.++.+++.|+..+..++..........+...+.+..|+.++++.....++..++..+...+.
T Consensus        42 ~a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG~~f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~  115 (145)
T d1dvpa1          42 NAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAY  115 (145)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccchHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            35677888888999999999999888777654222334444667788888888654337788888887776554


No 46 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.76  E-value=3.4  Score=29.79  Aligned_cols=73  Identities=11%  Similarity=0.015  Sum_probs=55.1

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcC------CCChHHHHHHHHHHHHHhc
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGR------HDMPQLQFEAAWALTNVAS  147 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~------~~~~~~~~~a~~~L~nl~~  147 (384)
                      .++..+.+.|++.++.+++.|+..+..+...........+...+++..|+.+++.      .+ +.++..++..+...+.
T Consensus        45 ~a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~~~-~~Vk~kil~li~~W~~  123 (145)
T d1ujka_          45 LATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTS-EKVKNKILELLYSWTV  123 (145)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSC-HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCCCc-HHHHHHHHHHHHHHHH
Confidence            4577788888999999999999999877665423334566677889999999863      23 6788888888876654


No 47 
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.49  E-value=2.8  Score=30.20  Aligned_cols=74  Identities=12%  Similarity=-0.007  Sum_probs=55.6

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCC-----CChHHHHHHHHHHHHHhc
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRH-----DMPQLQFEAAWALTNVAS  147 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~-----~~~~~~~~a~~~L~nl~~  147 (384)
                      .++..+.+.+++.++.+++.|+..+..++..........+....++..|+.++...     .++.++..++..+...+.
T Consensus        38 ~a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~~fh~evask~Fl~~l~~li~~k~~~~~~~~~Vk~kil~li~~Wa~  116 (143)
T d1mhqa_          38 HAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV  116 (143)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence            46777888899999999999999888777654334445566778888999988631     227888888888877655


No 48 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=69.84  E-value=2.8  Score=30.22  Aligned_cols=73  Identities=7%  Similarity=0.064  Sum_probs=55.2

Q ss_pred             ChHHHHHhhcCCCHHHHHHHHHHHHhhhCCC-CchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHHhhhhcC
Q 016714          161 AVPMFVQLLSSGSDDVREQAVWALGNVAGDS-PSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRG  233 (384)
Q Consensus       161 ~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~-~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L~~L~~~  233 (384)
                      ++..|.+-|.+.++.++-.|+.+|-.+..++ +.++..+...+.++.|..++....+..+...++.++...+..
T Consensus        43 a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG~~f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~  116 (145)
T d1dvpa1          43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYA  116 (145)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHccchHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence            4566777788889999999999988888664 446677777778888888885556777887877777766653


No 49 
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=69.37  E-value=21  Score=27.14  Aligned_cols=109  Identities=7%  Similarity=-0.062  Sum_probs=65.7

Q ss_pred             HHHHHHhhcc-CCHhHHHHHHHHH-HHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHH
Q 016714          246 LPILQRLIHL-NDEEVLTDACWAL-SYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQF  323 (384)
Q Consensus       246 ~~~L~~lL~~-~~~~i~~~a~~~l-~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~  323 (384)
                      ++.+..++.+ ++.++....+..+ +.+..+.+         ...+.+..+..+++.-++..|+.+.-....  ....+.
T Consensus        86 l~~~~~~~~~~~~Wd~vD~~~~~i~~~~~~~~~---------~~~~~l~~w~~s~~~w~rR~aiv~~l~~~~--~~~~~~  154 (213)
T d2b6ca1          86 VVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLT---------ELPTIFALFYGAENFWNRRVALNLQLMLKE--KTNQDL  154 (213)
T ss_dssp             HHHGGGGTTTTCSHHHHHHHHHHHHHHHHHSGG---------GHHHHHHHHTTCSSHHHHHHHHHTTTTCGG--GCCHHH
T ss_pred             HHHHHHHHccCccHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHhCCCHHHHHHHHHHHHHHHH--cccHHH
Confidence            4444455544 3455555555444 33333222         234567778888888888776544322221  111222


Q ss_pred             HHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHHHHhCC
Q 016714          324 VIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQVHDSFH  371 (384)
Q Consensus       324 i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~l~~~~  371 (384)
                           ++..+..++.++ +.-|++...|+|..++..+|+.+...++.+
T Consensus       155 -----~~~~~~~~~~d~-e~~i~kAigW~Lre~~k~~p~~v~~fl~~~  196 (213)
T d2b6ca1         155 -----LKKAIIYDRTTE-EFFIQKAIGWSLRQYSKTNPQWVEELMKEL  196 (213)
T ss_dssp             -----HHHHHHHTTTCC-CHHHHHHHHHHHHHHTTTCHHHHHHHHHHS
T ss_pred             -----HHHHHHHhCCCh-HHHHHHHHHHHHHHHHHHCHHHHHHHHHhC
Confidence                 234455666666 889999999999999998888887777554


No 50 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.21  E-value=24  Score=24.94  Aligned_cols=73  Identities=15%  Similarity=0.062  Sum_probs=55.2

Q ss_pred             ChHHHHHhhcCCCHHHHHHHHHHHHhhhCCC-CchhhHHHhcCChHHHHHHhcc-----cchhHHHHHHHHHHhhhhcC
Q 016714          161 AVPMFVQLLSSGSDDVREQAVWALGNVAGDS-PSCRDLVLSSGALMPLLAQLNE-----HSKLSMLRNATWTLSNFCRG  233 (384)
Q Consensus       161 ~i~~L~~lL~~~~~~v~~~a~~~L~nl~~~~-~~~~~~i~~~g~i~~L~~~l~~-----~~~~~~~~~a~~~L~~L~~~  233 (384)
                      ++..|.+-|.+.++.++-.|+..|-.+..++ +.++..+...+++..|+.++..     ..+..+...++..+..-+..
T Consensus        46 a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~kil~li~~W~~~  124 (145)
T d1ujka_          46 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVG  124 (145)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence            4556677778889999999999999888874 6688888888899999998842     23556777777766665544


No 51 
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.10  E-value=10  Score=26.92  Aligned_cols=114  Identities=13%  Similarity=0.072  Sum_probs=74.0

Q ss_pred             hccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCC-hHHHHHHHHcCchH
Q 016714          253 IHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGD-DAQTQFVIDNGVLP  331 (384)
Q Consensus       253 L~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~-~~~~~~i~~~g~l~  331 (384)
                      +..+|.......|..+..   .+.. .     ..++..|.+-|.++++.++..|+..+-.++... +.....+.+..+++
T Consensus        14 ~~~~dw~~il~icD~I~~---~~~~-~-----k~a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~~fh~evask~Fl~   84 (143)
T d1mhqa_          14 MSEQDWSAIQNFCEQVNT---DPNG-P-----THAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLN   84 (143)
T ss_dssp             CSSCCHHHHHHHHHHHHH---SSHH-H-----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHH
T ss_pred             CCCcCHHHHHHHHHHHHc---CCCC-H-----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHH
Confidence            344566666666666652   1111 1     123566778889999999999999999888765 44445566668888


Q ss_pred             HHHHHhccC-----CchhHHHHHHHHHHHHhc---CCHH---HHHHHHhCCcccc
Q 016714          332 CLYQLLTQN-----HKKSIKKEACWTISNITA---GNRA---QIQVHDSFHLFVL  375 (384)
Q Consensus       332 ~L~~ll~~~-----~~~~v~~~a~~~L~nl~~---~~~~---~i~~l~~~~~ll~  375 (384)
                      .|.+++...     .++.|++.+.-.+...+.   +.+.   .-+.+...|++.+
T Consensus        85 ~l~~li~~k~~~~~~~~~Vk~kil~li~~Wa~~f~~~~~~~~~y~~Lk~~Gvi~~  139 (143)
T d1mhqa_          85 ELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLKKQGIIKQ  139 (143)
T ss_dssp             HHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSCS
T ss_pred             HHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHCCCCCC
Confidence            999998731     256788887776666654   3333   2345667777653


No 52 
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.19  E-value=7.2  Score=28.15  Aligned_cols=74  Identities=11%  Similarity=0.009  Sum_probs=53.5

Q ss_pred             cCHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCC-----CChHHHHHHHHHHHHHhc
Q 016714           74 ESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRH-----DMPQLQFEAAWALTNVAS  147 (384)
Q Consensus        74 ~~l~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~-----~~~~~~~~a~~~L~nl~~  147 (384)
                      .++..+.+.+++.++.+++.|+..|..+...........+....++..|+.++...     ..+.++..++..+...+.
T Consensus        39 ~a~rai~krl~~~~~~~~l~aL~LLe~~vkNCG~~F~~evask~Fl~~l~kli~~k~~~~~~~~~Vk~kil~ll~~Wa~  117 (151)
T d1juqa_          39 IAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTM  117 (151)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHcccCCCCcccHHHHHHHHHHHHHHHH
Confidence            45677888888999999999998888776544233345566677888899888642     126788888887777655


No 53 
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=38.07  E-value=27  Score=26.93  Aligned_cols=81  Identities=11%  Similarity=-0.005  Sum_probs=49.9

Q ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHHHHhhcCCCChHHHHHHHHHHHHHhcCCchhHHHH
Q 016714           77 PSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVV  156 (384)
Q Consensus        77 ~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~nl~~~~~~~~~~i  156 (384)
                      +.+.....|++.-.+..+...+..++...++...+..--..+++.+-..+.++. +-++....|+|..+...+++.+...
T Consensus       111 ~~~~~W~~S~~~w~rRag~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~i~d~~-~~v~kAv~W~Lr~ig~~~~~l~~~a  189 (235)
T d1t06a_         111 DVADKWIASGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHSP-ERTKSAMNNFLNTVAISYVPLHEKA  189 (235)
T ss_dssp             HHHHHHHHSCCHHHHHHHHHHHHHHHHHSCGGGSCHHHHHHHHHHHHHHGGGSC-HHHHHHHHHHHHHHHHHCGGGHHHH
T ss_pred             HHHHHHhcCChHHHHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHHHhccCch-HHHHHHHHHHHHHHhccChHHHHHH
Confidence            344555567777677766666665554221111111111223444555677777 7999999999999998888877776


Q ss_pred             Hh
Q 016714          157 IE  158 (384)
Q Consensus       157 ~~  158 (384)
                      ++
T Consensus       190 l~  191 (235)
T d1t06a_         190 VE  191 (235)
T ss_dssp             HH
T ss_pred             HH
Confidence            65


No 54 
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=37.09  E-value=13  Score=28.90  Aligned_cols=81  Identities=4%  Similarity=-0.084  Sum_probs=54.8

Q ss_pred             hHHHHHhcCCCChhhHHHHHHHHHHhhcCC-hHHHHHHHHcCchHHHHHHhccCCchhHHHHHHHHHHHHhcCCHHHHHH
Q 016714          288 CPRLVELLMHPSATVLIPALRTVGNIVTGD-DAQTQFVIDNGVLPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQV  366 (384)
Q Consensus       288 ~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~-~~~~~~i~~~g~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~i~~  366 (384)
                      .+.+..+..+++.-.+..+..++..+.... +...+..--..+++.+...+.+. .+.+++...|+|..+...+++..+.
T Consensus       110 ~~~~~~W~~S~~~w~rRag~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~i~d~-~~~v~kAv~W~Lr~ig~~~~~l~~~  188 (235)
T d1t06a_         110 QDVADKWIASGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHS-PERTKSAMNNFLNTVAISYVPLHEK  188 (235)
T ss_dssp             HHHHHHHHHSCCHHHHHHHHHHHHHHHHHSCGGGSCHHHHHHHHHHHHHHGGGS-CHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred             HHHHHHHhcCChHHHHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHHHhccCc-hHHHHHHHHHHHHHHhccChHHHHH
Confidence            355677888888888888887777776432 11111000013556666778888 8999999999999999877665555


Q ss_pred             HHh
Q 016714          367 HDS  369 (384)
Q Consensus       367 l~~  369 (384)
                      .++
T Consensus       189 al~  191 (235)
T d1t06a_         189 AVE  191 (235)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554


No 55 
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.94  E-value=65  Score=22.38  Aligned_cols=83  Identities=7%  Similarity=-0.028  Sum_probs=49.3

Q ss_pred             CHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCchHHHHHH
Q 016714          257 DEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQL  336 (384)
Q Consensus       257 ~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~~~g~l~~L~~l  336 (384)
                      -+.+..-..||+-+.-     ....     ++..+...+....+.-+.+.+..+..++..........+..++.+.+...
T Consensus        24 ~~~I~~Lt~~a~~~~~-----~a~~-----Iv~~i~~~i~~~~~~~KL~~LYLiddI~~n~~~~y~~~f~~~l~~~f~~~   93 (144)
T d1szaa_          24 RPIITTLTKLAEENIS-----CAQY-----FVDAIESRIEKCMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYKRT   93 (144)
T ss_dssp             HHHHHHHHHHHHHCGG-----GHHH-----HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-----HHHH-----HHHHHHHHHhccCcccchhhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            4556666777766532     1222     24455555555567778889999999886543333344555555566666


Q ss_pred             hccCCchhHHHHHH
Q 016714          337 LTQNHKKSIKKEAC  350 (384)
Q Consensus       337 l~~~~~~~v~~~a~  350 (384)
                      .... ++.+|+...
T Consensus        94 y~~~-~~~~r~kl~  106 (144)
T d1szaa_          94 YLLV-DNTTRTKLI  106 (144)
T ss_dssp             HTTS-CHHHHHHHH
T ss_pred             HHcC-CHHHHHHHH
Confidence            6555 666666543


No 56 
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=25.91  E-value=1.2e+02  Score=22.45  Aligned_cols=139  Identities=5%  Similarity=-0.147  Sum_probs=77.6

Q ss_pred             HhhcCCCHHHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhcccchhHHHHHHHHHH-hhhhcCCCCCChhhhhch
Q 016714          167 QLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTL-SNFCRGKPPTPFEQVKPA  245 (384)
Q Consensus       167 ~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~~~~~~~~~a~~~L-~~L~~~~~~~~~~~~~~~  245 (384)
                      .+..++.-+.+-.|+..|........   .     ..++.+...+...++-++....+..+ ..+....        ...
T Consensus        57 ~L~~~~~~E~r~~a~~ll~~~~~~~~---~-----~~l~~~~~~~~~~~~Wd~vD~~~~~i~~~~~~~~--------~~~  120 (213)
T d2b6ca1          57 AYYQKTEREYQYVAIDLALQNVQRFS---L-----EEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHL--------TEL  120 (213)
T ss_dssp             HHHTSSSHHHHHHHHHHHHHTGGGCC---H-----HHHHHGGGGTTTTCSHHHHHHHHHHHHHHHHHSG--------GGH
T ss_pred             HHHcCchHHHHHHHHHHHHHHHhccC---H-----HHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhh--------hhH
Confidence            34455556677777766655532211   1     11222333332333444555444433 2232221        234


Q ss_pred             HHHHHHhhccCCHhHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHHhcCCCChhhHHHHHHHHHHhhcCChHHHHHHH
Q 016714          246 LPILQRLIHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVI  325 (384)
Q Consensus       246 ~~~L~~lL~~~~~~i~~~a~~~l~~l~~~~~~~~~~~~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~~~~~~~~~i~  325 (384)
                      .+.+.....+++.-++..++.+........+  ...     ++..+..++.+++.-|+....|.|..++..+++.+..++
T Consensus       121 ~~~l~~w~~s~~~w~rR~aiv~~l~~~~~~~--~~~-----~~~~~~~~~~d~e~~i~kAigW~Lre~~k~~p~~v~~fl  193 (213)
T d2b6ca1         121 PTIFALFYGAENFWNRRVALNLQLMLKEKTN--QDL-----LKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEELM  193 (213)
T ss_dssp             HHHHHHHTTCSSHHHHHHHHHTTTTCGGGCC--HHH-----HHHHHHHTTTCCCHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHccc--HHH-----HHHHHHHhCCChHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence            5667778888888777766554433222221  111     244556667788889999999999999988887766665


Q ss_pred             HcC
Q 016714          326 DNG  328 (384)
Q Consensus       326 ~~g  328 (384)
                      +..
T Consensus       194 ~~~  196 (213)
T d2b6ca1         194 KEL  196 (213)
T ss_dssp             HHS
T ss_pred             HhC
Confidence            543


No 57 
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.85  E-value=52  Score=23.27  Aligned_cols=73  Identities=8%  Similarity=-0.071  Sum_probs=44.5

Q ss_pred             CHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCHHHH-HHhhcCC--CChHHHHHHHHHHHHHhc
Q 016714           75 SIPSMVQGVW-SEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRF-VEFLGRH--DMPQLQFEAAWALTNVAS  147 (384)
Q Consensus        75 ~l~~lv~~l~-s~~~~~~~~a~~~l~~l~s~~~~~~~~~~~~~g~i~~L-v~lL~~~--~~~~~~~~a~~~L~nl~~  147 (384)
                      ++..+.+.|. +.++.+++.|+..|..+...........+...+.+..+ +..+...  ....++..++..+...+.
T Consensus        50 a~ral~krL~~~~n~~v~l~aL~LLe~~vkNCG~~fh~evas~~Fl~~ll~~~~~~~~~~~~~Vk~kil~li~~W~~  126 (153)
T d1elka_          50 ALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWAD  126 (153)
T ss_dssp             HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHH
Confidence            5666677775 45788888888877776654422333445555666654 3444332  224678888877777653


No 58 
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.39  E-value=1.7e+02  Score=23.34  Aligned_cols=139  Identities=12%  Similarity=0.057  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHhhhCCCCchhhHHHhcCChHHHHHHhccc--------chhHHHHHHHHHHhhhhcCCCCCChhhhhchH
Q 016714          175 DVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEH--------SKLSMLRNATWTLSNFCRGKPPTPFEQVKPAL  246 (384)
Q Consensus       175 ~v~~~a~~~L~nl~~~~~~~~~~i~~~g~i~~L~~~l~~~--------~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~  246 (384)
                      .++...+..+.......+. ...+. ...+++|++.+..+        .++++..-....+..+...-+.........++
T Consensus        44 ~iKkeiLkLi~t~i~~~~d-~~~v~-~~~i~pl~~~vL~DY~~~~p~~R~~eVL~l~~~ii~kl~~~~~~~v~~I~~~VF  121 (321)
T d1w9ca_          44 TVKRETLKLISGWVSRSND-PQMVA-ENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVF  121 (321)
T ss_dssp             HHHHHHHHHHHHHHTTCSC-HHHHH-HHTHHHHHHHHHHHHHTSCGGGCCTHHHHHHHHHHHHHGGGGGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCC-HHHHH-HHHHHHHHHHHHHHHHhCchhhccHhHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            3445555555555554443 23333 34678887644211        13444444333333333221211112224455


Q ss_pred             HHHHHhhcc---CCHhHHHHHHHHHHHhccCChHHHHHH---HHcCChHHHHHhcCCCChhhHHHHHHHHHHhhc
Q 016714          247 PILQRLIHL---NDEEVLTDACWALSYLSDGPNDKIQAV---IEAGVCPRLVELLMHPSATVLIPALRTVGNIVT  315 (384)
Q Consensus       247 ~~L~~lL~~---~~~~i~~~a~~~l~~l~~~~~~~~~~~---~~~g~~~~L~~lL~~~~~~v~~~a~~~l~nl~~  315 (384)
                      ..-+.++..   +-|+.+..-...|..+..+.....-.+   .-..++..++..++|++..+...++.++..+..
T Consensus       122 e~Tl~MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~~vidsi~wa~kH~~~~V~~~gL~~l~~ll~  196 (321)
T d1w9ca_         122 ECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQ  196 (321)
T ss_dssp             HHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccchhChHHHHHHHHHHHHHHHHCHHHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence            555566654   347888777777777664432211110   001346777778899999999999988877653


Done!