Your job contains 1 sequence.
>016716
MAMASSYLQCNHQHQLHLPSIRPNGFSFFKPKTNFRRTQLIKCTRKQVEVVYDPDERRNK
LADEVDREAPLSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLK
SRDRLSTNVPGIPVDDSNLIIKALNLYRKKTESDNFFWIHLDKKVPSGAGLGGGSSNAAT
ALWAANQFNGCVATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPM
VLIKPREACPTAEVYKHLRLDQTTKVDPLTLLEQISRNGLSQDVCINDLEAPAFQVLPSL
KRLKQRIIAAGRGQYDAVFMSGSGSTIVGIGSPDPPQFIYDDNEYEDVFLSEARFITREV
NQWYRESASTNACSEPPAFSETVG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016716
(384 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039503 - symbol:CDPMEK "4-(cytidine 5'-phosph... 1336 2.0e-136 1
TIGR_CMR|DET_0405 - symbol:DET_0405 "4-diphosphocytidyl-2... 276 4.2e-24 1
TIGR_CMR|BA_0043 - symbol:BA_0043 "4-diphosphocytidyl-2C-... 238 4.8e-20 1
TIGR_CMR|CHY_0188 - symbol:CHY_0188 "4-diphosphocytidyl-2... 236 8.5e-20 1
TIGR_CMR|CPS_3556 - symbol:CPS_3556 "4-diphosphocytidyl-2... 230 4.4e-19 1
UNIPROTKB|P62615 - symbol:ispE "IspE" species:83333 "Esch... 225 1.7e-18 1
TIGR_CMR|GSU_0660 - symbol:GSU_0660 "4-diphosphocytidyl-2... 216 1.9e-17 1
TIGR_CMR|SO_3836 - symbol:SO_3836 "4-diphosphocytidyl-2C-... 202 7.4e-15 1
UNIPROTKB|P65178 - symbol:ispE "4-diphosphocytidyl-2-C-me... 204 1.3e-14 1
TIGR_CMR|SPO_0318 - symbol:SPO_0318 "4-diphosphocytidyl-2... 196 4.5e-14 1
UNIPROTKB|Q9KQ23 - symbol:ispE "4-diphosphocytidyl-2-C-me... 186 1.9e-12 1
TIGR_CMR|VC_2182 - symbol:VC_2182 "4-diphosphocytidyl-2C-... 186 1.9e-12 1
GENEDB_PFALCIPARUM|PFE0150c - symbol:PFE0150c "4-diphosph... 169 1.1e-09 1
UNIPROTKB|Q8I470 - symbol:PFE0150c "4-diphosphocytidyl-2c... 169 1.1e-09 1
TIGR_CMR|APH_0574 - symbol:APH_0574 "4-diphosphocytidyl-2... 147 8.9e-08 1
TIGR_CMR|NSE_0720 - symbol:NSE_0720 "putative 4-diphospho... 141 3.7e-07 1
TIGR_CMR|ECH_0757 - symbol:ECH_0757 "4-diphosphocytidyl-2... 127 1.6e-05 1
TIGR_CMR|CJE_1247 - symbol:CJE_1247 "4-diphosphocytidyl-2... 111 0.00083 1
>TAIR|locus:2039503 [details] [associations]
symbol:CDPMEK "4-(cytidine
5'-phospho)-2-C-methyl-D-erithritol kinase" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016114 "terpenoid
biosynthetic process" evidence=IEA] [GO:0050515 "4-(cytidine
5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=IEA;ISS] [GO:0006783 "heme biosynthetic process"
evidence=RCA] [GO:0009637 "response to blue light" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] InterPro:IPR004424 InterPro:IPR006204 Pfam:PF00288
UniPathway:UPA00056 GO:GO:0005524 GO:GO:0009507 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005168 GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 EMBL:AB037877
EMBL:AF288615 EMBL:AY136394 EMBL:BT000208 IPI:IPI00538430
PIR:T02642 RefSeq:NP_180261.1 UniGene:At.48522 UniGene:At.70122
ProteinModelPortal:O81014 SMR:O81014 STRING:O81014 PaxDb:O81014
PRIDE:O81014 EnsemblPlants:AT2G26930.1 GeneID:817234
KEGG:ath:AT2G26930 TAIR:At2g26930 InParanoid:O81014 OMA:CVYSETA
PhylomeDB:O81014 ProtClustDB:CLSN2683430
BioCyc:ARA:AT2G26930-MONOMER ChEMBL:CHEMBL1293253
Genevestigator:O81014 GermOnline:AT2G26930 Uniprot:O81014
Length = 383
Score = 1336 (475.4 bits), Expect = 2.0e-136, P = 2.0e-136
Identities = 253/356 (71%), Positives = 286/356 (80%)
Query: 20 SIRPNGFSFFKPKTNFRRTQL---IKCTRKQVEVVYDPDERRNKLADEVDREAPLSRLTL 76
S + + S F PK R L +K +RKQVE+V+DPDER NK+ D+VD+EAPLSRL L
Sbjct: 18 SFKTSSSSSFSPK--LLRPLLSFSVKASRKQVEIVFDPDERLNKIGDDVDKEAPLSRLKL 75
Query: 77 FSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDD 136
FSPCKIN FLRIT KREDGFHDLASLFHVISLGDTIKFSLSP KS+DRLSTNV G+PVD
Sbjct: 76 FSPCKINVFLRITGKREDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVQGVPVDG 135
Query: 137 SNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVATEK 196
NLIIKALNLYRKKT S+ FFWIHLDKKVP TALWAAN+ NG + TE
Sbjct: 136 RNLIIKALNLYRKKTGSNRFFWIHLDKKVPTGAGLGGGSSNAATALWAANELNGGLVTEN 195
Query: 197 ELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAEVYK 256
ELQ+WSSEIGSDIPFFFSHGAAYCTGRGE+VQD+PPP PLD+PMVLIKPREAC TAEVYK
Sbjct: 196 ELQDWSSEIGSDIPFFFSHGAAYCTGRGEIVQDLPPPFPLDLPMVLIKPREACSTAEVYK 255
Query: 257 HLRLDQTTKVDPLTLLEQISRNGLSQDVCINDLEAPAFQVLPSLKRLKQRIIAAGRGQYD 316
LRLDQT+ ++PLTLLE ++ NG+SQ +C+NDLE PAF VLPSLKRLKQRIIA+GRG+YD
Sbjct: 256 RLRLDQTSNINPLTLLENVTSNGVSQSICVNDLEPPAFSVLPSLKRLKQRIIASGRGEYD 315
Query: 317 AVFMXXXXXXXXXXXXPDPPQFIYDDNEYEDVFLSEARFITREVNQWYRESASTNA 372
AVFM PDPPQFIYDD EY++VFLSEA F+TRE N+WY+E AS NA
Sbjct: 316 AVFMSGSGSTIIGIGSPDPPQFIYDDEEYKNVFLSEANFMTREANEWYKEPASANA 371
>TIGR_CMR|DET_0405 [details] [associations]
symbol:DET_0405 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 OMA:SSTKEMY
RefSeq:YP_181150.1 ProteinModelPortal:Q3Z9E9 STRING:Q3Z9E9
GeneID:3230252 KEGG:det:DET0405 PATRIC:21607879
ProtClustDB:CLSK837487 BioCyc:DETH243164:GJNF-405-MONOMER
Uniprot:Q3Z9E9
Length = 284
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 77/245 (31%), Positives = 117/245 (47%)
Query: 74 LTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIP 133
LTL +P K+N L + +R DG+H+L S+ +SL D + FS P K+ ++S++ P
Sbjct: 2 LTLLAPAKVNLSLEVLYRRNDGYHELRSIIQSLSLCDRLSFS--PAKTV-QISSDSPDWQ 58
Query: 134 VDDSNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVA 193
+ S L+ KA+ L+ +K + + K++P L N+ GC
Sbjct: 59 AEHS-LVSKAVALFSEKCGQGRGVNLTIAKRIPLVSGLGGDSSCAAAVLKGLNKLWGCGY 117
Query: 194 TEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACP--- 250
L E +E+GSD+PFF G A GRGE V P P + VL+ P P
Sbjct: 118 PRWRLMELGAELGSDVPFFMMGGTAMMEGRGETVT--PLPTLNQMWAVLLVPEIEMPPDK 175
Query: 251 TAEVYKHLRLDQTTKVDPLT-LLEQISRNGLSQDVCINDLEAPAFQVLPSLKRLKQRIIA 309
TA +Y++L D + + LLE I + LS C N E AF + P L + + + +
Sbjct: 176 TAALYRNLHADSFSSGEISDKLLEDICQGKLSYSSCFNVFEKIAFTLFPDLAKYRWQFLE 235
Query: 310 AGRGQ 314
AG Q
Sbjct: 236 AGAYQ 240
>TIGR_CMR|BA_0043 [details] [associations]
symbol:BA_0043 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:198094 "Bacillus anthracis str. Ames" [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 OMA:CVYSETA
RefSeq:NP_842612.1 RefSeq:YP_016647.2 RefSeq:YP_026331.1
ProteinModelPortal:Q81VZ6 DNASU:1088040
EnsemblBacteria:EBBACT00000009099 EnsemblBacteria:EBBACT00000018733
EnsemblBacteria:EBBACT00000021847 GeneID:1088040 GeneID:2815420
GeneID:2853141 KEGG:ban:BA_0043 KEGG:bar:GBAA_0043 KEGG:bat:BAS0044
ProtClustDB:PRK00128 BioCyc:BANT260799:GJAJ-51-MONOMER
BioCyc:BANT261594:GJ7F-52-MONOMER Uniprot:Q81VZ6
Length = 289
Score = 238 (88.8 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 72/251 (28%), Positives = 117/251 (46%)
Query: 73 RLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGI 132
+L + +P KIN L + KR+DG+H++ + I L D ++ + + R + ++ +
Sbjct: 2 KLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLEL-MELAEDRIEILSHNRYV 60
Query: 133 PVDDSNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCV 192
P D NL +A L ++K I ++K +P L N+
Sbjct: 61 PDDQRNLAYQAAKLLKEKFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLWNLG 120
Query: 193 ATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTA 252
T +L E +EIGSD+ F G A TGRGE ++ I P P ++L KP TA
Sbjct: 121 LTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKTP-P-SCWVILAKPHIGVFTA 178
Query: 253 EVYKHLRLDQTT--KVDPLT-LLEQISRNGLSQDVCINDLEAPAFQVLPSLKRLKQRIIA 309
+VY +L+L++ T VD + ++ G+ D N LE F + P + R+K ++
Sbjct: 179 DVYGNLKLNRVTHPNVDKMVDVINAGDYKGIC-DTVGNVLEDVTFAMHPEVARIKAQMKR 237
Query: 310 AGRGQYDAVFM 320
G DAV M
Sbjct: 238 FGA---DAVLM 245
>TIGR_CMR|CHY_0188 [details] [associations]
symbol:CHY_0188 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 RefSeq:YP_359060.1
ProteinModelPortal:Q3AFM4 STRING:Q3AFM4 GeneID:3728024
KEGG:chy:CHY_0188 PATRIC:21273557 OMA:SSTKEMY
BioCyc:CHYD246194:GJCN-189-MONOMER Uniprot:Q3AFM4
Length = 288
Score = 236 (88.1 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 69/241 (28%), Positives = 111/241 (46%)
Query: 74 LTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPG-- 131
+ +F+P KIN L I KR DG+H+L S+ I+LGD ++ + P + ++ V G
Sbjct: 1 MLIFAPAKINLTLDILGKRPDGYHELWSVMQAITLGDLVE--IEPAEG---INLRVVGAD 55
Query: 132 IPVDDSNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGC 191
+PVD +N+ KA+ R T I + KK+P L+ N+
Sbjct: 56 LPVDSTNIAFKAVQALRAATGKAIGASITIRKKIPLEAGLAGGSADGAAVLYGLNKLYNL 115
Query: 192 VATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPT 251
+++EL E ++I +DIPF + G A G GE V+ +PP + V+ KP T
Sbjct: 116 NLSQEELLEIGAKISADIPFCLTGGTALVQGIGEKVKKLPP-LKKGY-FVIYKPPFGIST 173
Query: 252 AEVYKHLRLDQTTKVDP--LTLLEQISRNGLSQ--DVCINDLEAPAFQVLPSLKRLKQRI 307
E Y L TK P +L+ + + L N LE A ++ P + + K +
Sbjct: 174 KEAYLRLAGKDLTKEHPDREKILKALGKENLEDLGKFLKNLLEISALEINPEIYKYKNEL 233
Query: 308 I 308
+
Sbjct: 234 L 234
>TIGR_CMR|CPS_3556 [details] [associations]
symbol:CPS_3556 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:167879 "Colwellia psychrerythraea 34H" [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 eggNOG:COG1947 KO:K00919
GO:GO:0050515 PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154
RefSeq:YP_270230.1 ProteinModelPortal:Q47Y90 SMR:Q47Y90
STRING:Q47Y90 GeneID:3520265 KEGG:cps:CPS_3556 PATRIC:21470043
HOGENOM:HOG000019601 OMA:TGACVFG
BioCyc:CPSY167879:GI48-3584-MONOMER Uniprot:Q47Y90
Length = 300
Score = 230 (86.0 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 64/197 (32%), Positives = 100/197 (50%)
Query: 78 SPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRD-RLSTNVPGIPVDD 136
SP KIN FL I +REDG+H+L +LF I DT+ +L+ ++ D L T + G+ DD
Sbjct: 19 SPAKINLFLHIVGQREDGYHNLETLFQFIDHSDTL--TLTATETPDIELLTPIDGVNNDD 76
Query: 137 SNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVATEK 196
NLI+KA L + ++ +D I ++K +P T L A N C +
Sbjct: 77 -NLIVKAARLLKNRSNTDLGVKISINKILPMGGGLGGGSSNAATVLVALNLLWQCEFSLS 135
Query: 197 ELQEWSSEIGSDIPFFFSHG-AAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAEVY 255
EL +G+D+P F HG +A+ G G+ + I P + ++ KP + T E++
Sbjct: 136 ELSSLGLSLGADVPIFI-HGFSAFAQGVGDHLTAIKPQ---ESWYLITKPECSISTKEIF 191
Query: 256 KHLRLDQTTK-VDPLTL 271
+ L + TK +DP L
Sbjct: 192 TAVDLPRNTKKLDPTAL 208
>UNIPROTKB|P62615 [details] [associations]
symbol:ispE "IspE" species:83333 "Escherichia coli K-12"
[GO:0016114 "terpenoid biosynthetic process" evidence=IEA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050515 "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
kinase activity" evidence=IEA;IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IDA] HAMAP:MF_00061
InterPro:IPR004424 InterPro:IPR006204 Pfam:PF00288
PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006744 GO:GO:0016114 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750
Pfam:PF08544 EMBL:U18555 EMBL:D10264 eggNOG:COG1947 KO:K00919
GO:GO:0050515 PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154
HOGENOM:HOG000019601 OMA:TGACVFG EMBL:M77237 EMBL:AJ249325
EMBL:AF179284 EMBL:AF216300 EMBL:AB037116 PIR:B47706
RefSeq:NP_415726.1 RefSeq:YP_489475.1 PDB:2WW4 PDBsum:2WW4
ProteinModelPortal:P62615 SMR:P62615 DIP:DIP-48028N IntAct:P62615
EnsemblBacteria:EBESCT00000000084 EnsemblBacteria:EBESCT00000016430
GeneID:12931821 GeneID:945774 KEGG:ecj:Y75_p1180 KEGG:eco:b1208
PATRIC:32117668 EchoBASE:EB1271 EcoGene:EG11294
ProtClustDB:PRK00343 BioCyc:EcoCyc:EG11294-MONOMER
BioCyc:ECOL316407:JW1199-MONOMER BioCyc:MetaCyc:EG11294-MONOMER
Genevestigator:P62615 Uniprot:P62615
Length = 283
Score = 225 (84.3 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 67/213 (31%), Positives = 99/213 (46%)
Query: 78 SPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDS 137
SP K+N FL IT +R DG+H L +LF + GDTI L RL T V G+ +D
Sbjct: 7 SPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRD-DGDIRLLTPVEGVEHED- 64
Query: 138 NLIIKALNLYRKKTESDNFFW-------IHLDKKVPXXXXXXXXXXXXXTALWAANQFNG 190
NLI++A L K T +D+ I +DK++P T L A N
Sbjct: 65 NLIVRAARLLMK-TAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQ 123
Query: 191 CVATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACP 250
C + EL E +G+D+P F AA+ G GE++ + PP + ++ P + P
Sbjct: 124 CGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPP---EKWYLVAHPGVSIP 180
Query: 251 TAEVYKHLRLDQTTKVDPLTLLEQISRNGLSQD 283
T ++K L + T P +E + + S D
Sbjct: 181 TPVIFKDPELPRNT---PKRSIETLLKCEFSND 210
>TIGR_CMR|GSU_0660 [details] [associations]
symbol:GSU_0660 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:243231 "Geobacter sulfurreducens PCA" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 RefSeq:NP_951717.1
ProteinModelPortal:Q74FE9 GeneID:2685508 KEGG:gsu:GSU0660
PATRIC:22024077 OMA:LMGVNEL ProtClustDB:PRK14614
BioCyc:GSUL243231:GH27-679-MONOMER Uniprot:Q74FE9
Length = 279
Score = 216 (81.1 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 67/245 (27%), Positives = 109/245 (44%)
Query: 71 LSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVP 130
+ +LTL +P K+N L + +R DG+HDL + I L D I+ L+ R+
Sbjct: 1 MKKLTLKAPAKVNYRLDVLRRRPDGYHDLRMIMQRIDLCDEIEICLTDGPGI-RVVCGRE 59
Query: 131 GIPVDDSNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNG 190
G+P N+ +A + + I + KK+P T L N+ G
Sbjct: 60 GVPDGPGNIAWRAADALLALSADKPGIDISITKKIPVAAGLGGGSSDAATVLMGVNELLG 119
Query: 191 CVATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACP 250
EK L+E +G+D+PFF A G GE + I +P +V++ P
Sbjct: 120 LDLPEKRLREIGVTLGADVPFFIFGRTALAEGIGEELTAIDR-VPA-AWIVVVNPNVPVS 177
Query: 251 TAEVYKHLRLD-QTTKVDPLTLLEQISRNGLSQDVCI---NDLEAPAFQVLPSLKRLKQR 306
TA VY++L+L + +V E ++ +VC NDLE+ P + +K+
Sbjct: 178 TAWVYQNLQLTGEAARVKIPRFFESVA------EVCAILSNDLESVTIPRYPVIGEIKRE 231
Query: 307 IIAAG 311
++AAG
Sbjct: 232 LLAAG 236
>TIGR_CMR|SO_3836 [details] [associations]
symbol:SO_3836 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:211586 "Shewanella oneidensis MR-1" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 KO:K00919 GO:GO:0050515 PANTHER:PTHR20861:SF2
TIGRFAMs:TIGR00154 HOGENOM:HOG000019601 OMA:TGACVFG
ProtClustDB:PRK00343 RefSeq:NP_719369.1 ProteinModelPortal:Q8EAR0
SMR:Q8EAR0 GeneID:1171481 KEGG:son:SO_3836 PATRIC:23527358
Uniprot:Q8EAR0
Length = 284
Score = 202 (76.2 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 60/199 (30%), Positives = 95/199 (47%)
Query: 78 SPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDS 137
+P K+N FL I +R DG+H+L +LF + D + F ++ ST + + D
Sbjct: 11 APAKLNLFLHINGRRSDGYHELQTLFQFVDCCDQLDFRVTDTPELILHST-MSAVVADSD 69
Query: 138 NLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVATEKE 197
NLI++A ++ T + I LDK++P T L A N+ + E
Sbjct: 70 NLILRAAKSLQQATGFNGGAEIWLDKRLPMGGGLGGGSSDAATTLVALNRLWNTQLSHDE 129
Query: 198 LQEWSSEIGSDIPFFFSHG-AAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAEVYK 256
L ++G+DIP F HG AA+ G GE +Q + P ++ ++I P TA V++
Sbjct: 130 LAAIGLKLGADIPVFI-HGFAAFAQGVGERLQAVNPA---ELWYLVIAPDAHVSTAAVFQ 185
Query: 257 HLRLDQTT-KVDPLTLLEQ 274
L + T K+ TLL Q
Sbjct: 186 DPLLPRNTPKLGLDTLLSQ 204
>UNIPROTKB|P65178 [details] [associations]
symbol:ispE "4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase" species:1773 "Mycobacterium tuberculosis" [GO:0040007
"growth" evidence=IMP] HAMAP:MF_00061 InterPro:IPR004424
InterPro:IPR006204 Pfam:PF00288 PIRSF:PIRSF010376
UniPathway:UPA00056 GO:GO:0005524 GO:GO:0040007 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0016114 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750
Pfam:PF08544 eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919
GO:GO:0050515 PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 PIR:F70603
RefSeq:NP_215527.1 RefSeq:NP_335476.1 RefSeq:YP_006514372.1
PDB:3PYD PDB:3PYE PDB:3PYF PDB:3PYG PDBsum:3PYD PDBsum:3PYE
PDBsum:3PYF PDBsum:3PYG ProteinModelPortal:P65178 SMR:P65178
PRIDE:P65178 EnsemblBacteria:EBMYCT00000001691
EnsemblBacteria:EBMYCT00000071220 GeneID:13319573 GeneID:886034
GeneID:925161 KEGG:mtc:MT1040 KEGG:mtu:Rv1011 KEGG:mtv:RVBD_1011
PATRIC:18124030 TubercuList:Rv1011 OMA:GYHELNT ProtClustDB:PRK03188
Uniprot:P65178
Length = 306
Score = 204 (76.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/249 (25%), Positives = 109/249 (43%)
Query: 70 PLSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNV 129
P +T+ P K+N +L + ++REDG+H+L ++FH +SL D + + + S + +
Sbjct: 2 PTGSVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGA 61
Query: 130 PGIPVDDSNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFN 189
+P D+ NL +A L + I +DK +P L A N
Sbjct: 62 DQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLW 121
Query: 190 GCVATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREAC 249
++L+ ++ +GSD+PF G A TGRGE + + VL
Sbjct: 122 ELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFH--WVLAFADSGL 179
Query: 250 PTAEVYKHL-RL----DQTTKVDPLTLLEQISRNGLSQDVCI--NDLEAPAFQVLPSLKR 302
T+ VY L RL D +P +L ++ Q + N+++A A + P+L R
Sbjct: 180 LTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALAR 239
Query: 303 LKQRIIAAG 311
+ + AG
Sbjct: 240 ALRAGVEAG 248
>TIGR_CMR|SPO_0318 [details] [associations]
symbol:SPO_0318 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016114
"terpenoid biosynthetic process" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
eggNOG:COG1947 HOGENOM:HOG000019600 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 OMA:CVYSETA
RefSeq:YP_165581.1 ProteinModelPortal:Q5LX98 GeneID:3193014
KEGG:sil:SPO0318 PATRIC:23373891 Uniprot:Q5LX98
Length = 279
Score = 196 (74.1 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 68/241 (28%), Positives = 104/241 (43%)
Query: 77 FSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDD 136
F+P KIN L +T +R+DG+H L SL +GDTI+ S S S D G+ +
Sbjct: 6 FAPAKINLTLHVTGQRDDGYHLLDSLVVFADIGDTIRVSASDRVSLDIDGPEAGGLAAEP 65
Query: 137 SNLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVATEK 196
NL+++A L + + I L K++P L A Q G A
Sbjct: 66 DNLVLRAARLLAPERGAA----ISLTKRLPVASGIGGGSADAAATLRALAQLWGLAAPSA 121
Query: 197 ELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAEVYK 256
E + +G+D+P A G G+ + IPP +D+ VL+ PR A T V+K
Sbjct: 122 EQ---ALTLGADVPVCLFPVPARMQGIGDRLGPIPPLPAMDI--VLVNPRVAVSTPAVFK 176
Query: 257 HLRLDQTTKVDPLTLLEQISR-NGLSQDVCI-----NDLEAPAFQVLPSLKRLKQRIIAA 310
L + + ++P ++ R L + C NDL PA P + + + A
Sbjct: 177 SLIVKENAPMNP-----ELPRWRDLPEFTCWLADQRNDLAEPAIAQQPVIADVLNALRDA 231
Query: 311 G 311
G
Sbjct: 232 G 232
>UNIPROTKB|Q9KQ23 [details] [associations]
symbol:ispE "4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
[GO:0050515 "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
kinase activity" evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424
InterPro:IPR006204 Pfam:PF00288 PIRSF:PIRSF010376
UniPathway:UPA00056 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0016114 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0008299
GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544 eggNOG:COG1947
KO:K00919 GO:GO:0050515 PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154
OMA:TGACVFG ProtClustDB:PRK00343 PIR:E82109 RefSeq:NP_231813.1
ProteinModelPortal:Q9KQ23 SMR:Q9KQ23 DNASU:2613318 GeneID:2613318
KEGG:vch:VC2182 PATRIC:20083377 Uniprot:Q9KQ23
Length = 295
Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 55/196 (28%), Positives = 92/196 (46%)
Query: 78 SPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDS 137
SP K+N FL IT +R +G+HDL +LF + GD + + + LS + + ++D
Sbjct: 15 SPAKLNLFLYITGRRANGYHDLQTLFQFLDHGDELTITANN-SGNITLSPALADVALED- 72
Query: 138 NLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVATEKE 197
NLI KA + +S I L K +P T L A N ++ +
Sbjct: 73 NLIYKAAMALKNAAQSPLGADIQLHKVLPMGGGIGGGSSNAATTLVALNYLWQTGLSDDQ 132
Query: 198 LQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAEVYKH 257
L E +G+D+P F AA+ G GE + + P + ++++P + T +++ H
Sbjct: 133 LAEIGLALGADVPVFTRGFAAFAEGVGEELSAVEPE---EKWYLVVRPAVSIATKDIFTH 189
Query: 258 LRLDQTT-KVDPLTLL 272
+L + T K D +LL
Sbjct: 190 PQLMRNTPKRDLASLL 205
>TIGR_CMR|VC_2182 [details] [associations]
symbol:VC_2182 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0008299 GO:GO:0019288 InterPro:IPR013750
Pfam:PF08544 eggNOG:COG1947 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 OMA:TGACVFG
ProtClustDB:PRK00343 PIR:E82109 RefSeq:NP_231813.1
ProteinModelPortal:Q9KQ23 SMR:Q9KQ23 DNASU:2613318 GeneID:2613318
KEGG:vch:VC2182 PATRIC:20083377 Uniprot:Q9KQ23
Length = 295
Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 55/196 (28%), Positives = 92/196 (46%)
Query: 78 SPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDS 137
SP K+N FL IT +R +G+HDL +LF + GD + + + LS + + ++D
Sbjct: 15 SPAKLNLFLYITGRRANGYHDLQTLFQFLDHGDELTITANN-SGNITLSPALADVALED- 72
Query: 138 NLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVATEKE 197
NLI KA + +S I L K +P T L A N ++ +
Sbjct: 73 NLIYKAAMALKNAAQSPLGADIQLHKVLPMGGGIGGGSSNAATTLVALNYLWQTGLSDDQ 132
Query: 198 LQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAEVYKH 257
L E +G+D+P F AA+ G GE + + P + ++++P + T +++ H
Sbjct: 133 LAEIGLALGADVPVFTRGFAAFAEGVGEELSAVEPE---EKWYLVVRPAVSIATKDIFTH 189
Query: 258 LRLDQTT-KVDPLTLL 272
+L + T K D +LL
Sbjct: 190 PQLMRNTPKRDLASLL 205
>GENEDB_PFALCIPARUM|PFE0150c [details] [associations]
symbol:PFE0150c
"4-diphosphocytidyl-2c-methyl-D-erythritol kinase (CMK), putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=IDA] HAMAP:MF_00061 InterPro:IPR004424 GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844504 GO:GO:0020011 KO:K00919 GO:GO:0050515
PANTHER:PTHR20861:SF2 RefSeq:XP_001351589.1
ProteinModelPortal:Q8I470 EnsemblProtists:PFE0150c:mRNA
GeneID:812925 KEGG:pfa:PFE0150c EuPathDB:PlasmoDB:PF3D7_0503100
HOGENOM:HOG000284056 ProtClustDB:CLSZ2433672 Uniprot:Q8I470
Length = 537
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 76/282 (26%), Positives = 121/282 (42%)
Query: 28 FFKP-KTN-FRRTQLIKCTRKQVEVVYDPDERRNKLADEVDREAPLSRLTLF-SPCKINA 84
+F P K N F R + K T +V + + + ++ ++L F PC+
Sbjct: 134 YFSPAKINLFLRLKEKKETYNEVSTLMHSLNLGDDIFIRALKKEDQNKLRHFLHPCESGD 193
Query: 85 FLRITNKREDGFHDLASL-----FHVISLGDTIKFSLSP----LKSRDRLSTNVPGIPVD 135
FL I + ED D +L VI+ D F ++ ++L P++
Sbjct: 194 FLTIV-RMEDKNRDKETLKEDCKIDVINKSDKDLFKHMKEDIIIQEHEKLPYEYNDYPIN 252
Query: 136 DSNLIIKALNLYRKKTE-SDNF-FWIHLDKKVPXXXXXXXXXXXXXTALW-AANQFNGCV 192
+ N+IIK L YR++ SD+ F IH++K++P T + N F
Sbjct: 253 NDNIIIKVLKRYREEFNISDDIRFLIHVNKRIPIFSGVGGGSSNGATVFYFLENIFYKYF 312
Query: 193 ATEK-ELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQD---IPPPIPLDVPMVLIKPREA 248
+ + E+ IGSDI FF S G AYCT +G V D I I D + L K E
Sbjct: 313 KGDNIKANEFLKTIGSDISFFSSSGFAYCTDKGNNVTDLKNIEANIK-DKDIYLFKIDEG 371
Query: 249 CPTAEVYKHLRLDQTTKVDPLTLLEQISRNGLSQDVCINDLE 290
+ VYK++ + + +P+ LL+ + S D I +E
Sbjct: 372 LSSKLVYKNVDYKRIIQYNPVNLLKCLINT--SNDDIIKQIE 411
Score = 97 (39.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 25 GFSFFKPKTNFRRTQLIKCTRKQVE-VVYDPDERRNKLADEVDREAPLSRLTLFSPCKIN 83
G+ + N + ++ T K++E ++ D + RN D FSP KIN
Sbjct: 93 GYVRLNNEANVEKNNVVN-TNKEIEKLLLDVLDNRNNWYDS----------KYFSPAKIN 141
Query: 84 AFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDR 124
FLR+ K+E ++++++L H ++LGD I F + LK D+
Sbjct: 142 LFLRLKEKKET-YNEVSTLMHSLNLGDDI-F-IRALKKEDQ 179
Score = 64 (27.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 259 RLDQTTKVDPLTLLEQISRNGLSQDVCINDLEAPAFQVLPSLKRLKQRIIAAGRGQYDAV 318
++++ K T + +R+ L Q+V +NDLE AF ++ L+ LK+ + + +D V
Sbjct: 409 QIEEKEKKFANTFISLDNRDNL-QNVFVNDLEHSAFYLIKKLQDLKEYL--RSQNMFDVV 465
Query: 319 FM 320
M
Sbjct: 466 SM 467
>UNIPROTKB|Q8I470 [details] [associations]
symbol:PFE0150c "4-diphosphocytidyl-2c-methyl-D-erythritol
kinase (CMK), putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0020011 "apicoplast" evidence=IDA] HAMAP:MF_00061
InterPro:IPR004424 GO:GO:0016114 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AL844504
GO:GO:0020011 KO:K00919 GO:GO:0050515 PANTHER:PTHR20861:SF2
RefSeq:XP_001351589.1 ProteinModelPortal:Q8I470
EnsemblProtists:PFE0150c:mRNA GeneID:812925 KEGG:pfa:PFE0150c
EuPathDB:PlasmoDB:PF3D7_0503100 HOGENOM:HOG000284056
ProtClustDB:CLSZ2433672 Uniprot:Q8I470
Length = 537
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 76/282 (26%), Positives = 121/282 (42%)
Query: 28 FFKP-KTN-FRRTQLIKCTRKQVEVVYDPDERRNKLADEVDREAPLSRLTLF-SPCKINA 84
+F P K N F R + K T +V + + + ++ ++L F PC+
Sbjct: 134 YFSPAKINLFLRLKEKKETYNEVSTLMHSLNLGDDIFIRALKKEDQNKLRHFLHPCESGD 193
Query: 85 FLRITNKREDGFHDLASL-----FHVISLGDTIKFSLSP----LKSRDRLSTNVPGIPVD 135
FL I + ED D +L VI+ D F ++ ++L P++
Sbjct: 194 FLTIV-RMEDKNRDKETLKEDCKIDVINKSDKDLFKHMKEDIIIQEHEKLPYEYNDYPIN 252
Query: 136 DSNLIIKALNLYRKKTE-SDNF-FWIHLDKKVPXXXXXXXXXXXXXTALW-AANQFNGCV 192
+ N+IIK L YR++ SD+ F IH++K++P T + N F
Sbjct: 253 NDNIIIKVLKRYREEFNISDDIRFLIHVNKRIPIFSGVGGGSSNGATVFYFLENIFYKYF 312
Query: 193 ATEK-ELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQD---IPPPIPLDVPMVLIKPREA 248
+ + E+ IGSDI FF S G AYCT +G V D I I D + L K E
Sbjct: 313 KGDNIKANEFLKTIGSDISFFSSSGFAYCTDKGNNVTDLKNIEANIK-DKDIYLFKIDEG 371
Query: 249 CPTAEVYKHLRLDQTTKVDPLTLLEQISRNGLSQDVCINDLE 290
+ VYK++ + + +P+ LL+ + S D I +E
Sbjct: 372 LSSKLVYKNVDYKRIIQYNPVNLLKCLINT--SNDDIIKQIE 411
Score = 97 (39.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 25 GFSFFKPKTNFRRTQLIKCTRKQVE-VVYDPDERRNKLADEVDREAPLSRLTLFSPCKIN 83
G+ + N + ++ T K++E ++ D + RN D FSP KIN
Sbjct: 93 GYVRLNNEANVEKNNVVN-TNKEIEKLLLDVLDNRNNWYDS----------KYFSPAKIN 141
Query: 84 AFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDR 124
FLR+ K+E ++++++L H ++LGD I F + LK D+
Sbjct: 142 LFLRLKEKKET-YNEVSTLMHSLNLGDDI-F-IRALKKEDQ 179
Score = 64 (27.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 259 RLDQTTKVDPLTLLEQISRNGLSQDVCINDLEAPAFQVLPSLKRLKQRIIAAGRGQYDAV 318
++++ K T + +R+ L Q+V +NDLE AF ++ L+ LK+ + + +D V
Sbjct: 409 QIEEKEKKFANTFISLDNRDNL-QNVFVNDLEHSAFYLIKKLQDLKEYL--RSQNMFDVV 465
Query: 319 FM 320
M
Sbjct: 466 SM 467
>TIGR_CMR|APH_0574 [details] [associations]
symbol:APH_0574 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:212042 "Anaplasma phagocytophilum HZ" [GO:0016114
"terpenoid biosynthetic process" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544
RefSeq:YP_505165.1 ProteinModelPortal:Q2GKD6 STRING:Q2GKD6
GeneID:3931014 KEGG:aph:APH_0574 PATRIC:20949814 eggNOG:COG1947
HOGENOM:HOG000019600 KO:K00919 OMA:QLCFGRG ProtClustDB:PRK14610
BioCyc:APHA212042:GHPM-598-MONOMER GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 Uniprot:Q2GKD6
Length = 296
Score = 147 (56.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 71 LSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDR-LSTNV 129
+S+ + +P KIN FL I K G+H + S+F + L D ++F + SR+R +
Sbjct: 1 MSKYFISAPAKINLFLHIVGKAPCGYHLIESVFAFVELYDVLEFDIG---SRNRGIRFLK 57
Query: 130 PGIPVDDSNLIIKAL-NLYRKKTE--SDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAAN 186
P N I +A+ +L R+ + +DN + + + K +P A+ +
Sbjct: 58 PSCINRRDNTIQRAIGHLVRRCSPGTTDNVY-VKVLKNIPVSSGLAGGSADAAAAINLLS 116
Query: 187 QFNGCVATEKELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPR 246
+ G EKE + + +GSD+P A+ G G+VV+ + L ++L+ P+
Sbjct: 117 KLWGI--NEKETERVAFRVGSDVPVCLESKTAFVAGMGDVVELLEDSF-LPRHVILVGPK 173
Query: 247 EACPTAEVY 255
T V+
Sbjct: 174 VELSTKSVF 182
>TIGR_CMR|NSE_0720 [details] [associations]
symbol:NSE_0720 "putative
4-diphosphocytidyl-2C-methyl-D-erythritol kinase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0016114 "terpenoid
biosynthetic process" evidence=ISS] [GO:0016773 "phosphotransferase
activity, alcohol group as acceptor" evidence=ISS] HAMAP:MF_00061
InterPro:IPR004424 InterPro:IPR006204 Pfam:PF00288
PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524 GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
GO:GO:0019288 InterPro:IPR013750 Pfam:PF08544 eggNOG:COG1947
HOGENOM:HOG000019600 KO:K00919 OMA:QLCFGRG GO:GO:0050515
PANTHER:PTHR20861:SF2 RefSeq:YP_506596.1 ProteinModelPortal:Q2GD50
STRING:Q2GD50 GeneID:3931979 KEGG:nse:NSE_0720 PATRIC:22681455
ProtClustDB:CLSK2527715 BioCyc:NSEN222891:GHFU-732-MONOMER
Uniprot:Q2GD50
Length = 279
Score = 141 (54.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 74 LTLFSPCKINAFLRITNKREDGFHDLASLF-HVISLGDTIKF-SLSPLKSRDRLSTNVPG 131
LTL +P KIN FL IT + E GFH L S+F L D I S ++ +
Sbjct: 2 LTLRAPAKINLFLLITGRNESGFHLLDSVFCFTHDLYDEIIIVPTSATENSVKFIGASQA 61
Query: 132 IPVDDS-NLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTALWAANQFNG 190
I D+S + +++ +N Y K+ +F + L K +P L F G
Sbjct: 62 IGADNSVSRVLRFVNDYAKR-----YFNVTLVKNLPVAAGIGGGSADAAALL---RYFGG 113
Query: 191 CV-ATEKELQEWSSEIGSD-IPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREA 248
+E L + + +G D + +SH + TG GE + +P L P++L+ P
Sbjct: 114 LHNISEVLLSQVALSVGFDTLACLYSH-PCHVTGMGEKIVALPES-KLVYPILLVCPNFP 171
Query: 249 CPTAEVYKHLR 259
+AEVYK+ R
Sbjct: 172 VSSAEVYKNFR 182
>TIGR_CMR|ECH_0757 [details] [associations]
symbol:ECH_0757 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016114 "terpenoid biosynthetic process" evidence=ISS]
[GO:0050515 "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
kinase activity" evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424
PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016114 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0019288
InterPro:IPR013750 Pfam:PF08544 eggNOG:COG1947 HOGENOM:HOG000019600
KO:K00919 OMA:QLCFGRG ProtClustDB:PRK14610 GO:GO:0050515
PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154 RefSeq:YP_507555.1
ProteinModelPortal:Q2GG78 STRING:Q2GG78 GeneID:3927481
KEGG:ech:ECH_0757 PATRIC:20576948
BioCyc:ECHA205920:GJNR-760-MONOMER Uniprot:Q2GG78
Length = 282
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 60/249 (24%), Positives = 108/249 (43%)
Query: 78 SPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDS 137
+P K+N FL IT KR D H L SLF +++ D ++ + K R +N+ +
Sbjct: 8 APAKVNLFLHITGKRSDQHHYLESLFVFVNVYDILEVDVGGSK-RGVYFSNLRISKYN-- 64
Query: 138 NLIIKALNLYRKKTESDNFFWIHLDKKVPXXXXXXXXXXXXXTAL-WAANQFNGCVATEK 196
N + KA+ L K + + + K + + N +N
Sbjct: 65 NTVYKAIELLLKHSAVCPNVSVSIIKNILVSAGLAGGSADAAAIMRLLGNMWN---IDYT 121
Query: 197 ELQEWSSEIGSDIPFFFSHGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPR-EACPTAEVY 255
LQ+ + +IGSD+P + G GE + + P + L ++L+ PR + TA+V+
Sbjct: 122 LLQDLALKIGSDVPACLESKTLFAKGVGEDIL-LLPDLLLPKYIILVAPRGKTLSTAKVF 180
Query: 256 KHLRLDQTTKVDPLTLLEQ--ISRNGLSQDVCI--NDLEAPAFQVLPS-------LKRLK 304
+ Q+ P ++ ++ + ++ + +C NDL A + +P LK+LK
Sbjct: 181 NNY---QSATYSP-SICDKLPVKQDDWMELICNAKNDLLEVALKFVPEIEEILFVLKQLK 236
Query: 305 QRIIAAGRG 313
+IA G
Sbjct: 237 NSVIARMTG 245
>TIGR_CMR|CJE_1247 [details] [associations]
symbol:CJE_1247 "4-diphosphocytidyl-2C-methyl-D-erythritol
kinase" species:195099 "Campylobacter jejuni RM1221" [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050515
"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"
evidence=ISS] HAMAP:MF_00061 InterPro:IPR004424 InterPro:IPR006204
Pfam:PF00288 PIRSF:PIRSF010376 UniPathway:UPA00056 GO:GO:0005524
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0016114
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0019288 eggNOG:COG1947 HOGENOM:HOG000019600
KO:K00919 GO:GO:0050515 PANTHER:PTHR20861:SF2 TIGRFAMs:TIGR00154
RefSeq:YP_179235.1 ProteinModelPortal:Q5HU00 STRING:Q5HU00
GeneID:3231754 KEGG:cjr:CJE1247 PATRIC:20044290 OMA:YAKVNIF
ProtClustDB:PRK04181 BioCyc:CJEJ195099:GJC0-1273-MONOMER
Uniprot:Q5HU00
Length = 255
Score = 111 (44.1 bits), Expect = 0.00083, P = 0.00083
Identities = 61/247 (24%), Positives = 101/247 (40%)
Query: 81 KINAFLRITNKREDGFHDLASLFHVISLGDTI-KFSLSPLKSRDRLSTNVPGIPVDDSNL 139
K N FL++T +H L S F I L D + L +S + + ++N+
Sbjct: 6 KANIFLKLTGFDSRKYHLLESRF--ILLKDVFDELELVDKESDSKKEFEIISNFKCENNI 63
Query: 140 IIKA-LNLYRK-KTESDNFFW---IHLDKKVPXXXXXXXXXXXXXTALWAANQFNGCVAT 194
I KA L L R+ E F + L K +P + L N+
Sbjct: 64 IQKAYLLLSRRYNNELKELFSKKSLKLTKNIPVCAGLGGGSSDCASFLLLINETLNLKLN 123
Query: 195 EKELQEWSSEIGSDIPFFFS-HGAAYCTGRGEVVQDIPPPIPLDVPMVLIKPREACPTAE 253
+EL S ++GSDI FF S +A + GE++++ IP ++ P+ +C T
Sbjct: 124 LQELINLSIQLGSDIAFFLSGFHSANVSSCGEIIEEFEDDIP-NLKWTF--PQISCQTKA 180
Query: 254 VYKHLR---LDQTTKVDPLTLLEQISRNGLSQDVC---INDLEAPAFQVLPSLKR-LKQR 306
VY D + + +++S L Q+ +NDL P + P +K L++
Sbjct: 181 VYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKELNDLFTPCATLYPKMKSYLQED 240
Query: 307 IIAAGRG 313
+G G
Sbjct: 241 FFLSGSG 247
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 384 359 0.00081 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 615 (65 KB)
Total size of DFA: 254 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.50u 0.25s 28.75t Elapsed: 00:00:01
Total cpu time: 28.51u 0.25s 28.76t Elapsed: 00:00:01
Start: Mon May 20 22:52:47 2013 End: Mon May 20 22:52:48 2013