BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016717
(384 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20390|PPT1_CAEEL Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1
PE=2 SV=2
Length = 298
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 143/268 (53%), Gaps = 14/268 (5%)
Query: 71 SLPFIVLHGISDKCTN----RGVTQFTELLSSWSGSQGYCIEIGDGAWDSWTMPLFQQTA 126
+P ++ HG+ D C N V + E G + +++G + T
Sbjct: 24 QVPVVMWHGMGDCCCNPLSMGSVKKLFE--EQIPGVYVHSLQLGSSITKDIEHGFYANTN 81
Query: 127 ----IACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAA 182
+AC K+KN +L +GYN IG SQG R + + C PP+KNL+S+ G H G+
Sbjct: 82 ELVYMACIKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFG 140
Query: 183 IPLC-GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEI 241
P C G +C + L+ L Y F+Q + + Y+ P + EY K FL +
Sbjct: 141 APYCIGDNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADI--NN 198
Query: 242 VNERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTED 301
N N TYK SL+NLVL+ F QD ++VPK++SWFG+Y DG D +LP +T LY ED
Sbjct: 199 ENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKED 258
Query: 302 WIGLKTLDEAGKVKFINVTGSHLEISRS 329
IGLK L E+G++ F++V G HL+I RS
Sbjct: 259 RIGLKKLHESGRIHFMDVDGDHLQIPRS 286
>sp|P45479|PPT1_RAT Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1
SV=1
Length = 306
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 15/278 (5%)
Query: 73 PFIVLHGISDKCTN----RGVTQFTELLSSWSGSQGYCIEIG----DGAWDSWTMPLFQQ 124
P ++ HG+ D C N + + E G +EIG + +S+ + + Q
Sbjct: 34 PLVIWHGMGDSCCNPMSMGSIKKMVE--KEIPGIYVLSLEIGKNMVEDVENSFFLNVNLQ 91
Query: 125 TAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAIP 184
+AC+ ++ +L GYN IG SQG R + + C PP+ LIS+ G H G+ +P
Sbjct: 92 VGMACQILEKDPKLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLP 150
Query: 185 LC--GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIV 242
C IC + + YS +Q+ L + Y+ P Y FL +N E
Sbjct: 151 RCPGESSHICDFIRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQE-- 208
Query: 243 NERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDW 302
N +YKE +L+ V++ F DS++ P ++ WFG+Y G +P Q+T LYTED
Sbjct: 209 RHINESYKENLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDR 268
Query: 303 IGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYLK 340
+GLK +D+AGK+ F+ G HL+IS+ +I+P+LK
Sbjct: 269 LGLKKMDKAGKLVFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|Q54CM0|PPT3_DICDI Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum
GN=ppt3 PE=3 SV=1
Length = 289
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 148/286 (51%), Gaps = 20/286 (6%)
Query: 68 LSYSLPFIVLHGISDKCTNRGVTQFTELLSSW---SGSQGYC--IEIGDGAWDSWTMPLF 122
+S + P +++HG++ + E L SW S Y +EIG+GA+DS +
Sbjct: 18 VSATRPVVLMHGVTTG------KESMEPLKSWIEESIPDIYVLNVEIGNGAFDSIFTTMD 71
Query: 123 QQTAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAA 182
Q + V+ +L++G+N+IG SQG +I R ++ P V N IS GP G
Sbjct: 72 SQIEEFAQVVQADPKLANGFNLIGFSQGTLIARAFVQRY-NNPQVYNYISWNGPQGGQFG 130
Query: 183 IPLCGFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIV 242
P +P +D ++ Y +Q L+ + Y+K P I +YL+ FL +NNE
Sbjct: 131 TPFVN-IP---WVDKVLGTIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNE-Y 185
Query: 243 NERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDW 302
+N+TYKE L +VL D ++PKE+ WF +Y DGS ++P QQ Y+EDW
Sbjct: 186 QVKNTTYKENLTKLNAMVLTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDW 245
Query: 303 IGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYLKDQSLTAMQ 348
+GL+TLDE+ ++ F T +H + ++ Y PY + +L +Q
Sbjct: 246 LGLRTLDESNRLFFYTTTCTHRD---HPIEDYCKPYFTNFTLPYLQ 288
>sp|O88531|PPT1_MOUSE Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2
Length = 306
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 15/278 (5%)
Query: 73 PFIVLHGISDKCTN---RGVTQFTELLSSWSGSQGYCIEIG----DGAWDSWTMPLFQQT 125
P ++ HG+ D C N GV + + G +EIG + +S+ + + Q
Sbjct: 34 PLVIWHGMGDSCCNPMSMGVIK-KMVEKEIPGIYVLSLEIGKNMMEDVENSFFLNVNVQV 92
Query: 126 AIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAIPL 185
+ C+ ++ +L GYN IG SQG R + + C PP+ LIS+ G H G+ +P
Sbjct: 93 NMVCQILEKDPKLQQGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPR 151
Query: 186 C--GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNE-IV 242
C IC + + YS +Q+ L + Y+ P Y FL +N E V
Sbjct: 152 CPGESSHICDFIRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQERCV 211
Query: 243 NERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDW 302
NE +YK+ +L+ V++ F DS++ P ++ WFG+Y G +P Q++ LYTED
Sbjct: 212 NE---SYKKNLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDR 268
Query: 303 IGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYLK 340
+GLK +D+AGK+ F+ G HL+IS+ +I+P+LK
Sbjct: 269 LGLKKMDKAGKLVFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|P50897|PPT1_HUMAN Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1
Length = 306
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 15/278 (5%)
Query: 72 LPFIVLHGISDKCTN----RGVTQFTELLSSWSGSQGYCIEIG----DGAWDSWTMPLFQ 123
LP ++ HG+ D C N + + E G +EIG + +S+ + +
Sbjct: 33 LPLVIWHGMGDSCCNPLSMGAIKKMVE--KKIPGIYVLSLEIGKTLMEDVENSFFLNVNS 90
Query: 124 QTAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAI 183
Q C+ + +L GYN +G SQG R + + C PP+ NLIS+ G H G+ +
Sbjct: 91 QVTTVCQALAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGL 149
Query: 184 PLC--GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEI 241
P C IC + + YS +Q+ L + Y+ P Y FL +N E
Sbjct: 150 PRCPGESSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE- 208
Query: 242 VNERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTED 301
N +YK+ +L+ V++ F DS++ P ++ WFG+Y G +P Q+T LYT+D
Sbjct: 209 -RGINESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQD 267
Query: 302 WIGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYL 339
+GLK +D AG++ F+ G HL++S +I+P+L
Sbjct: 268 RLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|Q8HXW6|PPT1_MACFA Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1
PE=2 SV=1
Length = 306
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 15/278 (5%)
Query: 72 LPFIVLHGISDKCTN----RGVTQFTELLSSWSGSQGYCIEIG----DGAWDSWTMPLFQ 123
LP ++ HG+ D C N + + E G +EIG + +S+ + +
Sbjct: 33 LPLVIWHGMGDSCCNPLSMGAIKKMVE--KKIPGIYVLSLEIGKTLMEDVENSFFLNVNS 90
Query: 124 QTAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAI 183
Q C+ + +L GYN +G SQG R + + C PP+ NLIS+ G H G+ +
Sbjct: 91 QVTTVCQTLAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGL 149
Query: 184 PLC--GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEI 241
P C IC + + YS +Q+ L + Y+ P Y FL +N E
Sbjct: 150 PRCPGESSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE- 208
Query: 242 VNERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTED 301
N +YK+ +L+ V++ F DS++ P ++ WFG+Y G +P Q+T LYT+D
Sbjct: 209 -RGINESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQD 267
Query: 302 WIGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYL 339
+GLK +D AG++ F+ G HL++S +I+P+L
Sbjct: 268 RLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|P45478|PPT1_BOVIN Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1
Length = 306
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 15/279 (5%)
Query: 72 LPFIVLHGISDKCTN----RGVTQFTELLSSWSGSQGYCIEIG----DGAWDSWTMPLFQ 123
LP ++ HG+ D C N + + E G +EIG + +S+ + +
Sbjct: 33 LPLVIWHGMGDSCCNPLSMGAIKKMVE--KKIPGIHVLSLEIGKTLREDVENSFFLNVNS 90
Query: 124 QTAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAI 183
Q C+ + +L GYN +G SQG R + + C PP+ NLIS+ G H G+ +
Sbjct: 91 QVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQGVFGL 149
Query: 184 PLC--GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEI 241
P C IC + + Y+ +Q+ L + Y+ P Y FL +N E
Sbjct: 150 PRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQE- 208
Query: 242 VNERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTED 301
N +YK+ +L+ V++ F D+++ P ++ WFG+Y G +P Q++ LYT+D
Sbjct: 209 -RGVNESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQD 267
Query: 302 WIGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYLK 340
+GLK +D+AG++ F+ + G HL++S +I+P+L+
Sbjct: 268 RLGLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFLE 306
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 146/279 (52%), Gaps = 14/279 (5%)
Query: 69 SYSLPFIVLHGISDKCTNRGVTQFTELLSSWSGSQGYCIEIGDGAWDS----WTMPLFQQ 124
S LP ++ HG+ D T+ +T+ ++ + + Y I +GD ++ + L Q
Sbjct: 42 SEQLPVVIWHGLGDTPTSFTLTEVSQRVQKLTKGAVYAIRVGDNEFEDIKAGYLGKLEDQ 101
Query: 125 TAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAIP 184
C+ + N LS+G+ +GLSQG + R + + C+ +++LI+L PH+GI IP
Sbjct: 102 LDEVCDLIGNEDSLSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIP 160
Query: 185 LCGFLPICILLDALVK----LEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNE 240
C P ++ A+V L I+ ++Q+H+ + YY+ +YL+ KFL LNNE
Sbjct: 161 GCS--PTNLICKAVVHSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNE 218
Query: 241 IVNERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTE 300
++++ + E+ L+NLV + FE+D ++ P ++ FG+ + + + + + LY
Sbjct: 219 VLHDNYTRNIEKLKELDNLVAVSFERDDIVEPPYSTGFGWINETTGEN-IEMEDFVLYES 277
Query: 301 DWIGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYL 339
+GLK L GK++ I+ G HL++ D ++ Y
Sbjct: 278 --LGLKDLVNQGKLETISFPGRHLQMRWGDFDALVLKYF 314
>sp|Q9W3C7|PPT1_DROME Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1
PE=1 SV=2
Length = 314
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 15/280 (5%)
Query: 72 LPFIVLHGISDKCT---NRGVTQFTELLSSWSGSQGYCIEIGDGAWDSWTMPLF----QQ 124
LP ++ HG+ D C + G ++ G ++IG W F +Q
Sbjct: 41 LPVVLWHGMGDTCCVPFSLGAI-MNLIVEQTKGGYVRSLQIGGNVLIDWQSGFFIHPNEQ 99
Query: 125 TAIACEKVKNMSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAIP 184
C+++ L+ GY+ IG SQG R + E C PP++NLI+L G H GI +P
Sbjct: 100 VDYVCKQLLQDEHLAKGYHAIGFSQGGQFLRAVAERCPN-PPMRNLITLGGQHQGIFGLP 158
Query: 185 LCGFLPI--CILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIV 242
+C L C + L+ Y+ +Q L + Y+ P +Y G FL +NNE+
Sbjct: 159 MCPTLTEKPCDYITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNELF 218
Query: 243 NERNSTYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDW 302
N Y E L+ V++ F D+++ PKE+ WF YY G + P ++++Y +
Sbjct: 219 --INKFYIENLQKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQD-- 274
Query: 303 IGLKTLDEAGKVKFINVTGSHLEISRSDMKKYIVPYLKDQ 342
+GL + G++ F+ V G HL IS++ + IVP L ++
Sbjct: 275 LGLDKMHRQGQLVFLGVEGDHLAISKAWFIQNIVPLLLEK 314
>sp|Q9VKH6|PPT2_DROME Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster
GN=Ppt2 PE=2 SV=1
Length = 288
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 140 DGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAIPLCGFLPICI-LLDAL 198
+G ++G SQG ++ R I+ VK ISL+ P AG FL + L A
Sbjct: 90 EGIIVLGYSQGGLLARAAIQSLPEHN-VKTFISLSSPQAGQYG---TSFLHLIFPDLAAK 145
Query: 199 VKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERNSTYKERFASLEN 258
E++ + H + GY+ P YLK +FLP +NNE ++++K L
Sbjct: 146 TAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSFKMGMVRLNK 205
Query: 259 LVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLDEAGKVKFI- 317
LV+I D V+ P ++S FGY+ D + D ++P + ++T D IG++TL EAGK+ +
Sbjct: 206 LVMIGGPNDDVITPWQSSHFGYF-DENMD-VIPFIRRPIFTSDSIGIRTLQEAGKLIIVV 263
Query: 318 --NVTGSHLEISRSDMKKYIVPYL 339
+V R + + I PYL
Sbjct: 264 KPHVHHLAWHTRRDVIHEVIFPYL 287
>sp|Q6GNY7|PPT2B_XENLA Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1
Length = 288
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 141 GYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAGIAAIPLCGFLPICILLDALVK 200
G ++I SQG +I RG++E V I+L+ P G + L + ++ + ++
Sbjct: 90 GVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISALQ 148
Query: 201 LEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERNSTYKERFASLENLV 260
Y F ++ ++ GY++ P +YL+ FLPKLNNE+++ ++ K F L LV
Sbjct: 149 EVCYRKFFKE-ISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKLV 207
Query: 261 LIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLDEAGKVKFINVT 320
LI D V+ P ++S FG+Y + + ++ + +Y +D GL++LD G + +V
Sbjct: 208 LIGGPDDEVIAPWQSSHFGFYNEK--EEVVNMKDQMVYQKDTFGLQSLDGRGAITIYSVP 265
Query: 321 G 321
G
Sbjct: 266 G 266
>sp|Q6PCJ9|PPT2A_XENLA Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1
Length = 296
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 73 PFIVLHGISDKCTN-RGVTQFTELLSSWSGSQGYCIEIGDGAWDSWTMPLFQQTAIACEK 131
P IV+HG+ D N + + Q+ S G+ +++ D PL++Q E
Sbjct: 31 PVIVVHGLFDSSANFKNLLQYIN--ESHPGTNVTVLDLFDNK--ESLQPLWKQVQGFKEA 86
Query: 132 VKNMSQLS--DGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAG-IAAIPLCGF 188
+ + Q + DG +++ SQG +I RG+++ V ISL+ P G +
Sbjct: 87 IYPIMQNAGRDGVHLLCYSQGGLICRGLLQTMPDHN-VDTFISLSSPQMGQYGDTDYLRY 145
Query: 189 LPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERNST 248
L + L +L Y+ Q + ++ P Y+ FL LN+E +
Sbjct: 146 LFPTYVKSNLYRL-CYTQMGQT-FSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATD 203
Query: 249 YKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTL 308
+K+ F L +VLI D V+ P E+S FG+Y + + +L + +Y +D GL+++
Sbjct: 204 WKKNFLRLRKMVLIGGPDDGVITPWESSHFGFYDEN--ETVLEMKYQMVYQDDTFGLRSM 261
Query: 309 DEAGKVKFINVTG 321
D G + V G
Sbjct: 262 DYRGAITVYGVPG 274
>sp|O35448|PPT2_MOUSE Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 18/248 (7%)
Query: 73 PFIVLHGISDKCTNRGVTQFTELLS----SWSGSQGYCIEIGDGAWDSWTMPLFQQTAIA 128
P IV+HG+ D + F LL + +G+ +++ DG PL++Q
Sbjct: 38 PVIVVHGLFDSSYS-----FRHLLDYINETHTGTVVTVLDLFDGR--ESLRPLWEQVQGF 90
Query: 129 CEKVKN-MSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAG-IAAIPLC 186
E V M + +G ++I SQG ++ R ++ + V + ISL+ P G
Sbjct: 91 REAVVPIMEKAPEGVHLICYSQGGLVCRALLSVMDNHN-VDSFISLSSPQMGQYGDTDYL 149
Query: 187 GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERN 246
+L + L ++ YS + Q+ + Y+ P YL FL +N E +
Sbjct: 150 KWLFPTSMRSNLYRV-CYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNA 207
Query: 247 STYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLK 306
+ +++ F + LVLI D V+ P ++S+FG+Y + + +L ++ +Y D GLK
Sbjct: 208 TAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLK 265
Query: 307 TLDEAGKV 314
TL G +
Sbjct: 266 TLLARGAI 273
>sp|Q1JQA0|PPT2_BOVIN Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1
Length = 305
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 73 PFIVLHGISDKCTN-RGVTQFTELLSSWSGSQGYCIEIGDGAWDSWTMPLFQQTAIACEK 131
P IV+HG+ D + R + ++ + G+ +++ DG PL++Q E
Sbjct: 41 PVIVVHGLFDSSYSFRHLLEYIN--ETHPGTAVTVLDLFDGR--ESLRPLWEQVQGFREA 96
Query: 132 VKN-MSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAG-IAAIPLCGFL 189
V M++ G ++I SQG ++ R ++ + V + ISL+ P G +L
Sbjct: 97 VAPIMAKALQGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTNYLKWL 155
Query: 190 PICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERNSTY 249
+ L ++ YS + Q+ + Y+ P YL FL +N E + + +
Sbjct: 156 FPTSMRSNLYRI-CYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAW 213
Query: 250 KERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLD 309
++ F L LVLI D V+ P ++S+FG+Y + + +L ++ +Y D GLKTL
Sbjct: 214 RKNFLRLGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEKQLVYLRDSFGLKTLL 271
Query: 310 EAGKV 314
G +
Sbjct: 272 ARGAI 276
>sp|Q9UMR5|PPT2_HUMAN Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4
Length = 302
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 73 PFIVLHGISDKCTN-RGVTQFTELLSSWSGSQGYCIEIGDGAWDSWTMPLFQQTAIACEK 131
P IV+HG+ D + R + ++ + G+ +++ DG PL++Q E
Sbjct: 38 PVIVVHGLFDSSYSFRHLLEYIN--ETHPGTVVTVLDLFDGR--ESLRPLWEQVQGFREA 93
Query: 132 VKN-MSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAG-IAAIPLCGFL 189
V M++ G ++I SQG ++ R ++ + V + ISL+ P G +L
Sbjct: 94 VVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDTDYLKWL 152
Query: 190 PICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERNSTY 249
+ L ++ YS + Q+ + Y+ P YL FL +N E + + +
Sbjct: 153 FPTSMRSNLYRI-CYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVW 210
Query: 250 KERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLD 309
++ F + +LVLI D V+ P ++S+FG+Y + + +L ++ +Y D GLKTL
Sbjct: 211 RKNFLRVGHLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQLVYLRDSFGLKTLL 268
Query: 310 EAGKV 314
G +
Sbjct: 269 ARGAI 273
>sp|O70489|PPT2_RAT Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 18/248 (7%)
Query: 73 PFIVLHGISDKCTNRGVTQFTELLS----SWSGSQGYCIEIGDGAWDSWTMPLFQQTAIA 128
P IV+HG+ D + F LL + G+ +++ DG PL++Q
Sbjct: 38 PVIVVHGLFDSSYS-----FRHLLDYINETHPGTVVTVLDLFDGR--ESLRPLWEQVQGF 90
Query: 129 CEKVKN-MSQLSDGYNIIGLSQGNMIGRGIIEFCEGGPPVKNLISLAGPHAG-IAAIPLC 186
E V M + +G ++I SQG ++ R ++ + V + ISL+ P G
Sbjct: 91 REAVVPIMEKAPEGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTDYL 149
Query: 187 GFLPICILLDALVKLEIYSDFLQDHLAPSGYYKIPTDIPEYLKGCKFLPKLNNEIVNERN 246
+L + L ++ YS + Q+ + Y+ P YL FL +N E +
Sbjct: 150 KWLFPTSMRSNLYRI-CYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNA 207
Query: 247 STYKERFASLENLVLIMFEQDSVLVPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLK 306
+ +++ F + LVLI D V+ P ++S+FG+Y + + +L ++ +Y D GLK
Sbjct: 208 TAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLK 265
Query: 307 TLDEAGKV 314
TL G +
Sbjct: 266 TLLARGAI 273
>sp|B0Y224|AGALB_ASPFC Probable alpha-galactosidase B OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=aglB PE=3 SV=1
Length = 426
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 246 NSTYKERFASLENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQ 293
+S ++ A L N +L+ F QD V+ P + +GY PD +FDP PA+
Sbjct: 292 DSISQDHLAILSNKILLKFHQDPVIGRPAQPYKWGYNPDWTFDPAHPAE 340
>sp|Q4WE86|AGALB_ASPFU Probable alpha-galactosidase B OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglB PE=3
SV=2
Length = 447
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 246 NSTYKERFASLENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQ 293
+S ++ A L N +L+ F QD V+ P + +GY PD +FDP PA+
Sbjct: 313 DSISQDHLAILSNKILLKFHQDPVIGRPAQPYKWGYNPDWTFDPAHPAE 361
>sp|A1D0A3|AGALB_NEOFI Probable alpha-galactosidase B OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=aglB PE=3
SV=1
Length = 447
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 246 NSTYKERFASLENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQ 293
+S ++ A L N +L+ F QD V+ P +GY PD +FDP PA+
Sbjct: 313 DSISQDHLAILSNKILLKFHQDPVVGRPAHPYKWGYNPDWTFDPAHPAE 361
>sp|B2VG22|MUTS_ERWT9 DNA mismatch repair protein MutS OS=Erwinia tasmaniensis (strain
DSM 17950 / Et1/99) GN=mutS PE=3 SV=1
Length = 853
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 28/143 (19%)
Query: 221 PTDIPEYLKGCKFLPKLNNEIVNERNS----------TYKERFASLENLVL----IMFEQ 266
P D+ + LP+LNNE+ + N+ + E LE+ ++ ++
Sbjct: 364 PRDLARMRHAFQQLPQLNNELADSDNAHLQTLRSQMGEFTELRELLEHAIVETPPVLVRD 423
Query: 267 DSVLVP---KETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLDEAGKVKFINVTGSH 323
V+ P +E + DG+ D L + ++ + +GL TL KV F V G +
Sbjct: 424 GGVIAPGYNQELDEWRALADGATDYL---DRLEIREREKLGLDTL----KVGFNGVHGYY 476
Query: 324 LEISRSDMKKYIVP--YLKDQSL 344
+++SR + ++VP Y++ Q+L
Sbjct: 477 IQVSRG--QSHLVPIHYVRRQTL 497
>sp|Q2UJ97|AGALB_ASPOR Probable alpha-galactosidase B OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=aglB PE=3 SV=1
Length = 442
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 246 NSTYKERFASLENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQ 293
+S +E A L+N L+ F QD V+ P +GY PD +FDP PA+
Sbjct: 312 DSINEEHLAILKNKPLLSFHQDPVIGRPAYPYKWGYNPDWTFDPAHPAE 360
>sp|B8N306|AGALB_ASPFN Probable alpha-galactosidase B OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=aglB PE=3 SV=1
Length = 442
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 246 NSTYKERFASLENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQ 293
+S +E A L+N L+ F QD V+ P +GY PD +FDP PA+
Sbjct: 312 DSINEEHLAILKNKPLLSFHQDPVIGRPAYPYKWGYNPDWTFDPAHPAE 360
>sp|A1C5D3|AGALB_ASPCL Probable alpha-galactosidase B OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=aglB PE=3 SV=1
Length = 448
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 256 LENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLDEAGKV 314
L N LI F QD V+ P +GY PD +FDP PA E W G + + V
Sbjct: 324 LLNKYLIAFHQDPVIGRPAYPYKWGYSPDWTFDPAHPA-------EYWSGPSSTLDGTLV 376
Query: 315 KFINVTGSHLEISRSDMKKYIVPYLKD 341
+N GS +R+ + K I P LKD
Sbjct: 377 LMLNSEGSRQ--TRTAVWKEI-PELKD 400
>sp|A2QEJ9|AGALB_ASPNC Probable alpha-galactosidase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=aglB PE=3 SV=1
Length = 443
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 256 LENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLDEAGKV 314
L N L+ F QD+V+ P +GY PD +FDP PA E W G + E
Sbjct: 319 LSNKPLLTFHQDAVIGRPAYPYKWGYNPDWTFDPEHPA-------EYWSGPTSSGEV--- 368
Query: 315 KFINVTGSHLEISRSDMKKYIVPYLKDQ 342
F+ + S E+ VP LKD+
Sbjct: 369 -FVLMLNSEGEVKTRSAVWEEVPELKDR 395
>sp|Q9Y865|AGALB_ASPNG Probable alpha-galactosidase B OS=Aspergillus niger GN=aglB PE=2
SV=1
Length = 443
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 256 LENLVLIMFEQDSVL-VPKETSWFGYYPDGSFDPLLPAQQTQLYTEDWIGLKTLDEAGKV 314
L N L+ F QD+V+ P +GY PD +FDP PA E W G + E
Sbjct: 319 LSNKPLLTFHQDAVIGRPAYPYKWGYNPDWTFDPEHPA-------EYWSGPTSSGEV--- 368
Query: 315 KFINVTGSHLEISRSDMKKYIVPYLKDQ 342
F+ + S E+ VP LKD+
Sbjct: 369 -FVLMLNSEGEVKTRSAVWEEVPELKDR 395
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,695,722
Number of Sequences: 539616
Number of extensions: 6384907
Number of successful extensions: 14925
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 14871
Number of HSP's gapped (non-prelim): 32
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)