Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>016720
MERLLYSSSPTHFTKTHLKFSPFRSRLSPIDSPKLAFFCSLRSESKRVGSVSCKYENPSH
FSHPSSSELNDSRSLTPHRVDSPNESMPSSNFLKQIAKRTTGGKKAIAAGTLVALSAAIV
FLIHPVFAPAAFATFQTAARTGGPAAAAVGSRLIRTELLSSAWTGFFAGCLHTLSGPDHL
AALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGLLFLLLKDRLHIEVIRTWGTRVVGMT
LLVIGAMGIKEASEVPTPCVALENGECDVSVYEALDNPAVGKKKIGFATFATGIVHGLQP
DALMMVLPALALPSRLAGAAFLIMFLLGTVVAMGSYTVFIGSCSQALKDRIPRITEKLTW
ASSLVAIALGFAILISQFFGYSLY

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016720
        (384 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059889 - symbol:AT2G16800 species:3702 "Arabi...  1014  2.6e-102  1


>TAIR|locus:2059889 [details] [associations]
            symbol:AT2G16800 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0015099 "nickel
            cation transmembrane transporter activity" evidence=ISS]
            [GO:0015675 "nickel cation transport" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA;ISS] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            [GO:0000394 "RNA splicing, via endonucleolytic cleavage and
            ligation" evidence=RCA] [GO:0009086 "methionine biosynthetic
            process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
            biosynthetic process" evidence=RCA] [GO:0009616 "virus induced gene
            silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
            evidence=RCA] InterPro:IPR011541 Pfam:PF03824 GO:GO:0016021
            EMBL:CP002685 GO:GO:0046872 EMBL:AC005825 GO:GO:0015087
            GO:GO:0015099 GO:GO:0035444 IPI:IPI00524261 PIR:D84544
            RefSeq:NP_565394.1 UniGene:At.21095 UniGene:At.68111 PRIDE:Q9SLD9
            EnsemblPlants:AT2G16800.1 GeneID:816181 KEGG:ath:AT2G16800
            TAIR:At2g16800 InParanoid:Q9SLD9 OMA:QPDALLM PhylomeDB:Q9SLD9
            ProtClustDB:CLSN2914932 ArrayExpress:Q9SLD9 Genevestigator:Q9SLD9
            Uniprot:Q9SLD9
        Length = 372

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 219/389 (56%), Positives = 267/389 (68%)

Query:     1 MERLLYSSSPTHFTKTHLKFSPFRSRLSPIDSPKLAFF-CSLRSESKRVGSVSCKY-ENP 58
             M+RLL   S      +  +  P    L  + S  L+ F  S R ES+R+ S+SC + +NP
Sbjct:     1 MDRLLQPPSSHSIAPSKFQSRPSPLLLHRLHSTNLSTFPSSRRLESRRISSISCFFRQNP 60

Query:    59 SHFSHPSSSELNDSRS--LTPHRVDSPNESMPSSNFLKQIAKRTTGGKKAIAAGTLVALS 116
             S  + P    LN S +  +   + D+   S P+  F+++I   +   +K I+AG ++ +S
Sbjct:    61 SPDTSPG---LNQSSNFLIASSQTDA---SKPNPGFIQRIVS-SFEQRKTISAGMVILVS 113

Query:   117 AAIVFLIHPVXXXXXXXXXXXXXXXXXXXXXXVGSRLIRTELLSSAWTGFFAGCLHTLSG 176
             A    L++P+                      VG +L+RTE+L+SAWTGFFAGCLHTLSG
Sbjct:   114 AIAALLLNPILVPPAFASFQTATNSGGAAV--VGGKLLRTEVLTSAWTGFFAGCLHTLSG 171

Query:   177 PDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGXXXXXXKDRLHIEVIRTWGTRV 236
             PDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQ+IFG      KDRLHIEVIRTWGTRV
Sbjct:   172 PDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQLIFGLLFLLLKDRLHIEVIRTWGTRV 231

Query:   237 VGMTLLVIGAMGIKEASEVPTPCVA-LENGECDVSVYEALDNPAVGKKKIGFATFATGIV 295
             VG+TLLVIGAMGIKEASE+P PCV  LENGE D          ++ KKKIGFATFATGIV
Sbjct:   232 VGLTLLVIGAMGIKEASEMPEPCVVTLENGETD--------EKSLKKKKIGFATFATGIV 283

Query:   296 HGLQPDXXXXXXXXXXXXSRLAGAAFLIMFLLGTVVAMGSYTVFIGSCSQALKDRIPRIT 355
             HGLQPD            SR+AGA+FLIMFL+GTV+AMGSYTVFIGSCS+ALK+++PRIT
Sbjct:   284 HGLQPDALMMVLPALALPSRIAGASFLIMFLIGTVIAMGSYTVFIGSCSEALKEKVPRIT 343

Query:   356 EKLTWASSLVAIALGFAILISQFFGYSLY 384
             EKLTWASSLVAI LG AI++SQFFG+SLY
Sbjct:   344 EKLTWASSLVAIGLGLAIIVSQFFGFSLY 372


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      384       344   0.00097  116 3  11 22  0.50    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.29u 0.10s 26.39t   Elapsed:  00:00:01
  Total cpu time:  26.29u 0.10s 26.39t   Elapsed:  00:00:01
  Start:  Mon May 20 23:02:52 2013   End:  Mon May 20 23:02:53 2013

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