Query 016721
Match_columns 384
No_of_seqs 198 out of 1189
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 18:20:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 4.4E-79 1.5E-83 609.6 32.8 272 97-377 2-278 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 3.2E-77 1.1E-81 597.2 31.9 274 96-377 4-282 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 1.9E-68 6.6E-73 523.5 28.0 256 96-377 2-263 (310)
4 2xvy_A Chelatase, putative; me 99.9 9.5E-26 3.3E-30 215.0 19.9 159 188-374 40-213 (269)
5 2jh3_A Ribosomal protein S2-re 99.9 3.6E-22 1.2E-26 205.6 6.9 188 162-377 9-218 (474)
6 2xwp_A Sirohydrochlorin cobalt 99.8 7.3E-20 2.5E-24 174.7 17.2 183 163-374 9-204 (264)
7 3lyh_A Cobalamin (vitamin B12) 98.9 2.1E-08 7.3E-13 84.8 11.9 110 163-280 12-123 (126)
8 1tjn_A Sirohydrochlorin cobalt 98.8 6.5E-09 2.2E-13 91.7 7.8 98 177-281 44-150 (156)
9 2xws_A Sirohydrochlorin cobalt 98.8 1.1E-08 3.8E-13 86.7 8.2 110 163-280 10-128 (133)
10 2xwp_A Sirohydrochlorin cobalt 97.9 5.2E-05 1.8E-09 71.8 11.5 104 163-279 144-257 (264)
11 2xvy_A Chelatase, putative; me 97.7 0.00013 4.3E-09 68.9 9.7 105 163-280 153-267 (269)
12 2h1v_A Ferrochelatase; rossman 97.5 0.00037 1.3E-08 67.8 9.9 105 165-279 193-309 (310)
13 3lyh_A Cobalamin (vitamin B12) 97.2 0.00089 3E-08 56.1 8.0 68 287-373 6-73 (126)
14 3hcn_A Ferrochelatase, mitocho 97.2 0.0019 6.4E-08 64.3 11.3 110 163-280 207-327 (359)
15 1lbq_A Ferrochelatase; rossman 97.2 0.00048 1.6E-08 68.6 6.4 109 164-280 213-328 (362)
16 2xws_A Sirohydrochlorin cobalt 97.1 0.0014 4.9E-08 54.9 8.2 71 287-377 4-74 (133)
17 1tjn_A Sirohydrochlorin cobalt 95.8 0.027 9.2E-07 49.1 8.1 68 287-373 25-92 (156)
18 2jh3_A Ribosomal protein S2-re 95.8 0.0073 2.5E-07 62.1 5.0 96 175-278 156-265 (474)
19 4b4o_A Epimerase family protei 65.1 6.3 0.00022 36.1 4.7 35 99-135 211-247 (298)
20 1uta_A FTSN, MSGA, cell divisi 41.8 15 0.00051 27.7 2.5 17 173-189 20-36 (81)
21 3rpe_A MDAB, modulator of drug 41.2 1.4E+02 0.0049 26.8 9.6 70 169-244 42-111 (218)
22 3rjz_A N-type ATP pyrophosphat 39.6 93 0.0032 28.6 8.1 34 192-226 7-40 (237)
23 1x60_A Sporulation-specific N- 35.0 36 0.0012 25.1 3.7 17 173-189 20-36 (79)
24 3lub_A Putative creatinine ami 34.8 65 0.0022 29.8 6.3 52 173-224 48-120 (254)
25 3fkr_A L-2-keto-3-deoxyarabona 33.4 2E+02 0.0068 27.1 9.6 53 188-244 76-134 (309)
26 4f8x_A Endo-1,4-beta-xylanase; 30.1 1.5E+02 0.005 28.6 8.1 49 318-368 195-244 (335)
27 1efp_B ETF, protein (electron 29.7 2.6E+02 0.0089 25.6 9.5 51 195-245 60-111 (252)
28 2ehh_A DHDPS, dihydrodipicolin 29.5 3.1E+02 0.01 25.4 10.1 52 189-244 69-123 (294)
29 2wkj_A N-acetylneuraminate lya 28.9 2.8E+02 0.0096 25.9 9.8 54 188-245 79-135 (303)
30 3cpr_A Dihydrodipicolinate syn 28.8 3.2E+02 0.011 25.5 10.1 52 189-244 85-139 (304)
31 2yxg_A DHDPS, dihydrodipicolin 28.6 2.9E+02 0.0099 25.5 9.7 53 189-245 69-124 (289)
32 1o97_C Electron transferring f 28.5 2.4E+02 0.0083 26.0 9.1 52 194-246 60-111 (264)
33 1f6k_A N-acetylneuraminate lya 28.3 3E+02 0.01 25.5 9.8 53 188-244 72-127 (293)
34 3qze_A DHDPS, dihydrodipicolin 28.0 3.2E+02 0.011 25.7 10.0 53 189-245 92-147 (314)
35 3flu_A DHDPS, dihydrodipicolin 27.5 3.4E+02 0.012 25.2 10.0 52 189-244 76-130 (297)
36 3szu_A ISPH, 4-hydroxy-3-methy 27.3 38 0.0013 33.0 3.3 68 253-322 44-124 (328)
37 3ju3_A Probable 2-oxoacid ferr 26.8 59 0.002 26.3 4.0 40 182-223 34-73 (118)
38 2ojp_A DHDPS, dihydrodipicolin 26.7 2.7E+02 0.0092 25.8 9.1 51 189-243 70-123 (292)
39 1efv_B Electron transfer flavo 26.7 2.6E+02 0.0088 25.8 8.8 51 195-245 63-114 (255)
40 1xky_A Dihydrodipicolinate syn 26.5 3.3E+02 0.011 25.4 9.7 52 189-244 81-135 (301)
41 3h5l_A Putative branched-chain 25.5 4.2E+02 0.014 24.7 10.5 52 169-220 174-225 (419)
42 3d0c_A Dihydrodipicolinate syn 24.9 3.6E+02 0.012 25.4 9.7 52 188-244 80-134 (314)
43 1o5k_A DHDPS, dihydrodipicolin 24.2 2.9E+02 0.0099 25.8 8.9 51 189-243 81-134 (306)
44 3si9_A DHDPS, dihydrodipicolin 24.2 3.5E+02 0.012 25.5 9.5 53 189-245 91-146 (315)
45 2rfg_A Dihydrodipicolinate syn 23.8 2.9E+02 0.01 25.7 8.8 53 189-245 69-124 (297)
46 2vc6_A MOSA, dihydrodipicolina 23.7 3.8E+02 0.013 24.7 9.6 52 189-244 69-123 (292)
47 3v4k_A DNA DC->DU-editing enzy 23.5 3.4E+02 0.012 24.5 8.7 101 157-278 98-202 (203)
48 1t5b_A Acyl carrier protein ph 22.6 3.3E+02 0.011 22.6 8.9 23 165-187 9-33 (201)
49 1olt_A Oxygen-independent copr 22.5 3.6E+02 0.012 26.5 9.6 37 327-365 163-206 (457)
50 2v9d_A YAGE; dihydrodipicolini 22.5 3.8E+02 0.013 25.6 9.5 52 189-244 100-154 (343)
51 3nco_A Endoglucanase fncel5A; 21.4 4.7E+02 0.016 23.8 9.8 130 201-369 41-177 (320)
52 2ftp_A Hydroxymethylglutaryl-C 21.0 1.5E+02 0.0052 27.6 6.2 43 179-221 129-179 (302)
53 2r8w_A AGR_C_1641P; APC7498, d 20.9 3.9E+02 0.013 25.4 9.1 53 189-245 103-158 (332)
54 3dx5_A Uncharacterized protein 20.8 4.3E+02 0.015 23.2 11.1 21 202-222 16-36 (286)
55 3b4u_A Dihydrodipicolinate syn 20.7 4.5E+02 0.015 24.3 9.4 55 187-245 70-128 (294)
56 1ydo_A HMG-COA lyase; TIM-barr 20.4 1.3E+02 0.0043 28.6 5.4 43 179-221 127-177 (307)
57 3vni_A Xylose isomerase domain 20.4 4.5E+02 0.015 23.2 15.5 122 201-339 17-153 (294)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=4.4e-79 Score=609.64 Aligned_cols=272 Identities=39% Similarity=0.686 Sum_probs=254.7
Q ss_pred CCceEEEEEccCCCCCcchHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhcccchhHhhhcccCCCCchhHHHHHHH
Q 016721 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (384)
Q Consensus 97 ~~K~aVLLvNlGtP~s~~dV~~fL~~~~~D~~Vi~lP~~~~~~~~~L~~~I~~~R~~ks~~~Y~~IgggSPL~~~T~~qa 176 (384)
++|+||||||||||++++||++||+|||+|++||++|. +++|+++|+++|++|++++|+.|||||||+.+|++|+
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~ 76 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG 76 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 57899999999999999999999999999999999983 4579999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHHhccCCCCC
Q 016721 177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (384)
Q Consensus 177 ~~L~~~L~~~g---~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~~~~~~~~~ 253 (384)
++|++.|++.+ .+++|++|||||+|+|+++|++|+++|+++|+++|||||||.+||||+++.+.+.+++....+.+.
T Consensus 77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~ 156 (359)
T 3hcn_A 77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK 156 (359)
T ss_dssp HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence 99999998754 468999999999999999999999999999999999999999999999999999988766556667
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhcCCC--CceEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCC
Q 016721 254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 331 (384)
Q Consensus 254 l~~I~~~~~~p~yI~ala~~I~~~l~~~~~~--~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~ 331 (384)
+++|++||+||+||+|++++|++++++++.+ ++.+|||||||||+++++ +||||++||++|+++|+++| |+.++
T Consensus 157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~-~GDpY~~q~~~t~~lv~e~L---g~~~~ 232 (359)
T 3hcn_A 157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVN-RGDPYPQEVSATVQKVMERL---EYCNP 232 (359)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCSC
T ss_pred eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcc-cCCCHHHHHHHHHHHHHHHc---CCCCC
Confidence 9999999999999999999999999987642 456899999999999995 69999999999999999999 77667
Q ss_pred eeEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEEEEeceeeecCc
Q 016721 332 HTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVRYTLLTE 377 (384)
Q Consensus 332 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~VvVvP~gFVsd~~ 377 (384)
|.++||||+|+.+||+|+|+|+|++|+++|+|+|+|+|||||+|..
T Consensus 233 ~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~l 278 (359)
T 3hcn_A 233 YRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHI 278 (359)
T ss_dssp EEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCC
T ss_pred EEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhH
Confidence 9999999999999999999999999999999999999999999985
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=3.2e-77 Score=597.21 Aligned_cols=274 Identities=36% Similarity=0.619 Sum_probs=255.7
Q ss_pred cCCceEEEEEccCCCCCcchHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhcccchhHhhhcccCCCCchhHHHHHH
Q 016721 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (384)
Q Consensus 96 ~~~K~aVLLvNlGtP~s~~dV~~fL~~~~~D~~Vi~lP~~~~~~~~~L~~~I~~~R~~ks~~~Y~~IgggSPL~~~T~~q 175 (384)
+++|+||||||||||++++||++||+|||+|++||++|++ | +++|+.+|+++|++|++++|+.|||||||+.+|++|
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~-~--~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q 80 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAK-Y--QKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQ 80 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSS-S--HHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHH-H--HHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHH
Confidence 5678999999999999999999999999999999999986 3 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---CCceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHHhccCCCC
Q 016721 176 AQALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRL 252 (384)
Q Consensus 176 a~~L~~~L~~~g---~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~~~~~~~~ 252 (384)
+++|++.|++.+ .+++|++|||||+|+|+|+|++|+++|+++|+++|||||||.+|||++.+++.+++++....+.+
T Consensus 81 ~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i 160 (362)
T 1lbq_A 81 ATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSI 160 (362)
T ss_dssp HHHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCc
Confidence 999999998653 57899999999999999999999999999999999999999999999999999999887666667
Q ss_pred CEEEecCCCCCHHHHHHHHHHHHHHHhhcCCC--CceEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCC
Q 016721 253 PVSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINN 330 (384)
Q Consensus 253 ~l~~I~~~~~~p~yI~ala~~I~~~l~~~~~~--~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~ 330 (384)
.+++|++|++||.||+|++++|++++++++.+ ++.+|||||||+|+++++ +||||.+||++|+++|+++| |+..
T Consensus 161 ~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~-~GDpY~~q~~~ta~ll~e~l---g~~~ 236 (362)
T 1lbq_A 161 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVN-TGDAYPAEVAATVYNIMQKL---KFKN 236 (362)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCS
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCcccccc-CCCcHHHHHHHHHHHHHHHc---CCCC
Confidence 78899999999999999999999999887543 456999999999999995 69999999999999999999 6655
Q ss_pred CeeEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEEEEeceeeecCc
Q 016721 331 DHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVRYTLLTE 377 (384)
Q Consensus 331 ~~~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~VvVvP~gFVsd~~ 377 (384)
+|.++||||+|+.+||+|+|+|+|++| ++|+|+|+|+|+||++|..
T Consensus 237 ~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~gFvsD~l 282 (362)
T 1lbq_A 237 PYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHI 282 (362)
T ss_dssp CEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECTTCSSCCH
T ss_pred CEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECCeechhhH
Confidence 799999999999999999999999999 9999999999999999974
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=1.9e-68 Score=523.54 Aligned_cols=256 Identities=27% Similarity=0.471 Sum_probs=235.8
Q ss_pred cCCceEEEEEccCCCCCcchHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhcccchhHhhhcccCCCCchhHHHHHH
Q 016721 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (384)
Q Consensus 96 ~~~K~aVLLvNlGtP~s~~dV~~fL~~~~~D~~Vi~lP~~~~~~~~~L~~~I~~~R~~ks~~~Y~~IgggSPL~~~T~~q 175 (384)
+++|+||||+|||||++++||++||+|+|.|+.+ | ..|+++++++|+.|||||||+.+|++|
T Consensus 2 ~~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~~---~---------------~~r~~~~~~~Y~~ig~gSPl~~~t~~q 63 (310)
T 2h1v_A 2 SRKKMGLLVMAYGTPYKEEDIERYYTHIRRGRKP---E---------------PEMLQDLKDRYEAIGGISPLAQITEQQ 63 (310)
T ss_dssp CCEEEEEEEEECCCCSSGGGHHHHHHHHTTTCCC---C---------------HHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCChHHHHHHHHHHhcCCCC---C---------------hHHHHHHHHHHHHCCCCChhHHHHHHH
Confidence 4568999999999999999999999999998642 3 235788999999999999999999999
Q ss_pred HHHHHHHHHhcCC--CceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHHhccCCCCC
Q 016721 176 AQALKTALEAKNL--PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (384)
Q Consensus 176 a~~L~~~L~~~g~--~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~~~~~~~~~ 253 (384)
+++|+++|++++. +++|++|||||+|+|+|+|++|+++|+++|+++|||||||.+|||++++++.+++++.+ .+.
T Consensus 64 ~~~L~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~~~---~~~ 140 (310)
T 2h1v_A 64 AHNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG---GLT 140 (310)
T ss_dssp HHHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHC---SCE
T ss_pred HHHHHHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHhCC---CCe
Confidence 9999999987763 78999999999999999999999999999999999999999999999999999988754 467
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhcCC--CCceEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCC
Q 016721 254 VSIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 331 (384)
Q Consensus 254 l~~I~~~~~~p~yI~ala~~I~~~l~~~~~--~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~ 331 (384)
+++|++|++||.||++++++|+++++.++. +++.+|||||||+|+++++ +||||.+||++|+++|+++| |+ .+
T Consensus 141 i~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~-~gDpY~~~~~~t~~~l~e~l---~~-~~ 215 (310)
T 2h1v_A 141 ITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE-FGDPYPDQLHESAKLIAEGA---GV-SE 215 (310)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGG-GTCCHHHHHHHHHHHHHHHH---TC-SC
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhcc-CCCChHHHHHHHHHHHHHHc---CC-CC
Confidence 999999999999999999999999987753 2457999999999999985 69999999999999999999 66 68
Q ss_pred eeEEEecC-ccCCCCCCCcHHHHHHHHHhC-CCCeEEEEeceeeecCc
Q 016721 332 HTLAYQSR-VGPVKWLKPYTDEVLVELGQK-GVKSLLAIPVRYTLLTE 377 (384)
Q Consensus 332 ~~lafQSr-~G~~~WL~P~t~d~L~~L~~~-Gvk~VvVvP~gFVsd~~ 377 (384)
|.++|||+ +|+.+||+|+|+++|++|+++ |+|+|+|+|+||++|..
T Consensus 216 ~~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~F~sD~l 263 (310)
T 2h1v_A 216 YAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHL 263 (310)
T ss_dssp EEEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTTCCSSCH
T ss_pred EEEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCcccccce
Confidence 99999997 999999999999999999999 99999999999999975
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=99.94 E-value=9.5e-26 Score=214.98 Aligned_cols=159 Identities=19% Similarity=0.203 Sum_probs=124.4
Q ss_pred CCceEEEeeec------------CCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHH---HHHhccCCCC
Q 016721 188 LPVNVYVGMRY------------WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI---FREDAYLSRL 252 (384)
Q Consensus 188 ~~~~V~~aMrY------------~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~---~~~~~~~~~~ 252 (384)
.+++|+.||.+ +.|+++++|++|.++|+++|+|+||||+ +|+.++++.+. +++... ..+
T Consensus 40 ~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l~-----~G~~~~di~~~~~~l~~~~~-~~~ 113 (269)
T 2xvy_A 40 PDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTI-----PGEEFHGLLETAHAFQGLPK-GLT 113 (269)
T ss_dssp TTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCSS-----SSHHHHHHHHHHHHHTTCTT-SCS
T ss_pred CCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEeceee-----ccHhHHHHHHHHHHHHHhhc-cCC
Confidence 45778888886 8899999999999999999999999983 56788888887 443221 125
Q ss_pred CEEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCCe
Q 016721 253 PVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDH 332 (384)
Q Consensus 253 ~l~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~~ 332 (384)
.++++++|+++|.|+++++++|++.+.... +++..|||++||+|. .||++..+ +++.+.+ + |
T Consensus 114 ~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~-----~~~~~~~~---~a~~l~~-~---~----- 175 (269)
T 2xvy_A 114 RVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH-----PADICYPG---LQYYLWR-L---D----- 175 (269)
T ss_dssp EEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS-----GGGGHHHH---HHHHHHT-T---C-----
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh-----hhccHHHH---HHHHHHh-c---C-----
Confidence 699999999999999999999999986421 133579999999996 25554432 4444422 2 3
Q ss_pred eEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEEEEeceeee
Q 016721 333 TLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVRYTL 374 (384)
Q Consensus 333 ~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~VvVvP~gFVs 374 (384)
..+| +|+.+| +|+++++|++|.++|+|+|+|+|++|++
T Consensus 176 ~~~~---~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~~ 213 (269)
T 2xvy_A 176 PDLL---VGTVEG-SPSFDNVMAELDVRKAKRVWLMPLMAVA 213 (269)
T ss_dssp TTEE---EEESSS-SSCHHHHHHHHHHHTCSEEEEEEESSSC
T ss_pred CCEE---EEEcCC-CCCHHHHHHHHHHCCCCEEEEECCcccc
Confidence 2345 566778 8999999999999999999999999886
No 5
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.85 E-value=3.6e-22 Score=205.63 Aligned_cols=188 Identities=18% Similarity=0.170 Sum_probs=149.9
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCC-----CceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHH
Q 016721 162 IGGGSPLRKITDEQAQALKTALEAKNL-----PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 236 (384)
Q Consensus 162 IgggSPL~~~T~~qa~~L~~~L~~~g~-----~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~ 236 (384)
+|-|||+...++++.++|++.|.+.+. ++.|+.||..++|+++++|++| |+++|+|+|||++++.-+.
T Consensus 9 VgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~G~H~~---- 81 (474)
T 2jh3_A 9 IGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSEGYVTE---- 81 (474)
T ss_dssp EECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCCSHHHH----
T ss_pred EeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhccHhHH----
Confidence 377899999999999999999977654 6789999988999999999999 9999999999998765333
Q ss_pred HHHHHHHHHhc-----------cCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhhccCC
Q 016721 237 RVLQNIFREDA-----------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAG 305 (384)
Q Consensus 237 ~~~~~~~~~~~-----------~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~G 305 (384)
+++.+.+.+.. ..+.+.++++++|+++|.|+++++++|+++++.-..+++..|||++
T Consensus 82 ~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg------------ 149 (474)
T 2jh3_A 82 TVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA------------ 149 (474)
T ss_dssp THHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE------------
T ss_pred HHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec------------
Confidence 34555554321 1234578999999999999999999999998651123445677765
Q ss_pred Cc-hHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccC-----CCCCCCcHHHHHHHHHhCCCCeEEEEeceeeecCc
Q 016721 306 DP-YRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGP-----VKWLKPYTDEVLVELGQKGVKSLLAIPVRYTLLTE 377 (384)
Q Consensus 306 Dp-Y~~q~~~T~~~i~~~L~~~g~~~~~~lafQSr~G~-----~~WL~P~t~d~L~~L~~~Gvk~VvVvP~gFVsd~~ 377 (384)
|| |..+|+++++++++++ |+ .+|.++|||+ +| .+||+|++++++++| |+|+|+|+|+ |++|+.
T Consensus 150 dp~a~~~~~~la~~L~e~l---g~-~~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~-Fl~dG~ 218 (474)
T 2jh3_A 150 ARPGNAALETHAQALRERG---QF-AGVEVVLESR-EALTPESHAASAVPLSEWPSRV---EAGQAVLVPF-LTHLGK 218 (474)
T ss_dssp SSTTCHHHHHHHHHHHHHC---CS-SEEEEEECCC-C---------CCEEGGGGGGGC---CSSCEEEEEC-SSCCCH
T ss_pred CchHHHHHHHHHHHHHHhc---CC-CcEEEEEEeC-CCCCCcccccccCCHHHHHHHc---CCCeEEEEEe-eccCCc
Confidence 45 5789999999999987 65 3699999998 54 468889999999998 8999999988 999986
No 6
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.83 E-value=7.3e-20 Score=174.73 Aligned_cols=183 Identities=14% Similarity=0.172 Sum_probs=138.7
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceEEEee-----------ecC--CCCHHHHHHHHHhcCCCEEEEEecCCCccc
Q 016721 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-----------RYW--YPFTEEAVQQIKRDRITRLVVLPLYPQFSI 229 (384)
Q Consensus 163 gggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~aM-----------rY~--~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~ 229 (384)
+-||......+...+++.+.+++...+++|+.|| ||+ .|+++++|++|.++|+++|+|+|||+
T Consensus 9 ~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l---- 84 (264)
T 2xwp_A 9 SFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI---- 84 (264)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS----
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc----
Confidence 4456555544434455555665555678999999 455 49999999999999999999999997
Q ss_pred CcHHHHHHHHHHHHHHhccCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhhccCCCchH
Q 016721 230 STTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYR 309 (384)
Q Consensus 230 sTtgs~~~~~~~~~~~~~~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~ 309 (384)
+.|..++++.+.+++.... -+.+++.+++..+|.+++++++.|.+.+... +++..|||++||.|.. +++|.
T Consensus 85 -~~G~~~~di~~~v~~~~~~-~~~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~-----~~~~~ 155 (264)
T 2xwp_A 85 -INGDEYEKIVREVQLLRPL-FTRLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH-----AFAAY 155 (264)
T ss_dssp -SSSHHHHHHHHHHHHHGGG-CSEEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG-----GGHHH
T ss_pred -cCcHHHHHHHHHHHHHHhh-CCceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch-----hhHHH
Confidence 5688888888887765432 1368899999999999999999998877543 2446899999999965 34443
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEEEEeceeee
Q 016721 310 DQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVRYTL 374 (384)
Q Consensus 310 ~q~~~T~~~i~~~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~VvVvP~gFVs 374 (384)
. +++.+.+++ |. +.++|..+| +|++++++++|.++|+|+|+|+|+.|++
T Consensus 156 ~----~~a~~l~~~---~~--------~v~~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~a 204 (264)
T 2xwp_A 156 A----CLDHMMTAQ---RF--------PARVGAVES-YPEVDILIDSLRDEGVTGVHLMPLMLVA 204 (264)
T ss_dssp H----HHHHHHHHT---TC--------SEEEEESSS-SSCHHHHHHHHHHHTCCEEEEEECSSCC
T ss_pred H----HHHHHHHhh---CC--------CEEEEEeCC-CCCHHHHHHHHHHCCCCEEEEEeeeccc
Confidence 2 333333332 31 335566778 9999999999999999999999999998
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=98.86 E-value=2.1e-08 Score=84.75 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=78.9
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceEEEe-eecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHH
Q 016721 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQN 241 (384)
Q Consensus 163 gggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~a-MrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~ 241 (384)
|-||+-... .+..+++.+.|.++. ..|+.| |.++.|+++++|++|.++|+++|+++|||.....-+ .+++.+
T Consensus 12 ~HGS~~~~~-~~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~----~~Dip~ 84 (126)
T 3lyh_A 12 AHGSSDARW-CETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHL----RKDVPA 84 (126)
T ss_dssp ECCCSCHHH-HHHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHH----HHHHHH
T ss_pred eCCCCCHHH-HHHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCchh----hhHHHH
Confidence 456654333 234455555665554 357888 578999999999999999999999999997654222 244444
Q ss_pred HHHHhc-cCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 016721 242 IFREDA-YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (384)
Q Consensus 242 ~~~~~~-~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (384)
.+.+.. .. .+.+++.+++..+|.++++++++|++++.+
T Consensus 85 ~~~~~~~~~-~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 85 MIERLEAEH-GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHHHHHHH-TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 443221 11 356888899999999999999999999864
No 8
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.82 E-value=6.5e-09 Score=91.72 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=71.2
Q ss_pred HHHHHHHHhcCCCceEEEe-eec-CCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHHhc-------
Q 016721 177 QALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDA------- 247 (384)
Q Consensus 177 ~~L~~~L~~~g~~~~V~~a-MrY-~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~~~------- 247 (384)
+++.+.|.++.....|++| |.| +.|+++++|++| |+++|+|+|||+++...+. +++.+.+.+..
T Consensus 44 ~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~~G~h~~----~DIp~~l~~~~~~~sw~~ 116 (156)
T 1tjn_A 44 ELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVT----EDLPDLLGFPRGRGIKEG 116 (156)
T ss_dssp HHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSSCSHHHH----THHHHHHTCCCSSSCEEE
T ss_pred HHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhcCCchhH----hHHHHHHHHHHhcccccc
Confidence 3344444444345679999 788 999999999999 9999999999998765443 34555443321
Q ss_pred cCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhhc
Q 016721 248 YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKF 281 (384)
Q Consensus 248 ~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~~ 281 (384)
..+.+.+.+.+++..+|.++++++++|+++++..
T Consensus 117 ~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~~ 150 (156)
T 1tjn_A 117 EFEGKKVVICEPIGEDYFVTYAILNSVFRIGRDG 150 (156)
T ss_dssp EETTEEEEECCCSTTCHHHHHHHHHHHHCCC---
T ss_pred cCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 1234567889999999999999999998877543
No 9
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.80 E-value=1.1e-08 Score=86.71 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=77.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceEEEe-eec-CCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHH
Q 016721 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (384)
Q Consensus 163 gggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~a-MrY-~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~ 240 (384)
|-||+-.. ..+..+++.+.|.++.....|+.| |.| +.|+++++|++| |+++|+|+|||+++..-+. +++.
T Consensus 10 ~HGS~~~~-~~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~~G~h~~----~di~ 81 (133)
T 2xws_A 10 GHGSQLNH-YREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVT----EDLP 81 (133)
T ss_dssp ECSCCCHH-HHHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSSCCHHHH----THHH
T ss_pred ECCCCCHH-HHHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeCCCcchH----hHHH
Confidence 44565433 223445555566555445789999 688 999999999999 9999999999987644332 3455
Q ss_pred HHHHHhc-------cCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 016721 241 NIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (384)
Q Consensus 241 ~~~~~~~-------~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (384)
+.+.+.. ..+.+.+++.+++..+|.++++++++|+++++.
T Consensus 82 ~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 82 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred HHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 5554321 123456788999999999999999999887643
No 10
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=97.95 E-value=5.2e-05 Score=71.84 Aligned_cols=104 Identities=15% Similarity=0.280 Sum_probs=75.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHH-HHHH--
Q 016721 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSS-IRVL-- 239 (384)
Q Consensus 163 gggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~-~~~~-- 239 (384)
|=|||.. ......+++..|.+.+. .|++|+--|.|++++++++|.+.|+++|+|+|++ ..+|-. .+++
T Consensus 144 gHGs~~~--~~~~~~~~a~~l~~~~~--~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~-----l~aG~h~~~Di~~ 214 (264)
T 2xwp_A 144 GHGASHH--AFAAYACLDHMMTAQRF--PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLM-----LVAGDHAINDMAS 214 (264)
T ss_dssp ECCCSSG--GGHHHHHHHHHHHHTTC--SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECS-----SCCCHHHHHHHHS
T ss_pred ECCCCch--hhHHHHHHHHHHHhhCC--CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeee-----cccCcchhhhccc
Confidence 6677765 23344566667766653 7899997789999999999999999999999998 344333 2322
Q ss_pred ------HHHHHHhccCCCCCEE-EecCCCCCHHHHHHHHHHHHHHHh
Q 016721 240 ------QNIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELG 279 (384)
Q Consensus 240 ------~~~~~~~~~~~~~~l~-~I~~~~~~p~yI~ala~~I~~~l~ 279 (384)
.+.+.+. ...+. .+++..++|.+++++.+++++++.
T Consensus 215 ~~~d~~~~~~~~~----g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 215 DDGDSWKMRFNAA----GIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp SSTTSHHHHHHHT----TCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHc----CCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 2333332 12333 468899999999999999999885
No 11
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=97.70 E-value=0.00013 Score=68.90 Aligned_cols=105 Identities=14% Similarity=0.225 Sum_probs=72.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHH-----
Q 016721 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIR----- 237 (384)
Q Consensus 163 gggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~----- 237 (384)
|=|||. .......++.+.|.+.+ -.+++|.--|.|+++++|++|.++|+++|+|+|++- .+|-..+
T Consensus 153 ~HGs~~--~~~~~~~~~a~~l~~~~--~~~~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l-----~~G~h~~~di~~ 223 (269)
T 2xvy_A 153 GHGTPH--PADICYPGLQYYLWRLD--PDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMA-----VAGDHARNDMAG 223 (269)
T ss_dssp ECCCSS--GGGGHHHHHHHHHHTTC--TTEEEEESSSSSCHHHHHHHHHHHTCSEEEEEEESS-----SCCHHHHTTTTC
T ss_pred ECCCCh--hhccHHHHHHHHHHhcC--CCEEEEEcCCCCCHHHHHHHHHHCCCCEEEEECCcc-----ccccchhhhcCC
Confidence 557776 22223344666665544 347888755799999999999999999999999972 2232222
Q ss_pred ----HHHHHHHHhccCCCCCEE-EecCCCCCHHHHHHHHHHHHHHHhh
Q 016721 238 ----VLQNIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELGK 280 (384)
Q Consensus 238 ----~~~~~~~~~~~~~~~~l~-~I~~~~~~p~yI~ala~~I~~~l~~ 280 (384)
.+.+.+.+. +..+. ++++..++|.+++++++++++++..
T Consensus 224 ~~~~~~~~~~~~~----g~~~~~~~~~Lg~~p~~~~~l~~~~~~a~~~ 267 (269)
T 2xvy_A 224 DEDDSWTSQLARR----GIEAKPVLHGTAESDAVAAIWLRHLDDALAR 267 (269)
T ss_dssp SSTTSHHHHHHHT----TCEEEECCCCGGGCHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHc----CcEEEEecCCCCCCHHHHHHHHHHHHHHHHh
Confidence 122333332 23443 7899999999999999999998864
No 12
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=97.49 E-value=0.00037 Score=67.76 Aligned_cols=105 Identities=13% Similarity=0.171 Sum_probs=72.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCceEEEeeec--------CCCCHHHHHHHHHhc-CCCEEEEEecCCCcccCcHHHH
Q 016721 165 GSPLRKITDEQAQALKTALEAKNLPVNVYVGMRY--------WYPFTEEAVQQIKRD-RITRLVVLPLYPQFSISTTGSS 235 (384)
Q Consensus 165 gSPL~~~T~~qa~~L~~~L~~~g~~~~V~~aMrY--------~~P~i~eaL~~L~~~-G~~~IvvlPLyPqyS~sTtgs~ 235 (384)
|.|-....++.++.|.++|.- -.+.+++.- ..|+++++|++|.++ |+++|+|+|.. |.+-...+.
T Consensus 193 gDpY~~~~~~t~~~l~e~l~~----~~~~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~--F~sD~lEtl 266 (310)
T 2h1v_A 193 GDPYPDQLHESAKLIAEGAGV----SEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVG--FVADHLEVL 266 (310)
T ss_dssp TCCHHHHHHHHHHHHHHHHTC----SCEEEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTT--CCSSCHHHH
T ss_pred CCChHHHHHHHHHHHHHHcCC----CCEEEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCc--ccccceeeH
Confidence 346566666677777777642 235566633 489999999999999 99999999963 333222222
Q ss_pred HH---HHHHHHHHhccCCCCCEEEecCCCCCHHHHHHHHHHHHHHHh
Q 016721 236 IR---VLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELG 279 (384)
Q Consensus 236 ~~---~~~~~~~~~~~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~ 279 (384)
.+ +..+.+.+. + ..+..++...++|.||+++++.|++.++
T Consensus 267 ~ei~~e~~e~~~~~---G-~~~~~~p~ln~~p~~i~~l~~~v~~~l~ 309 (310)
T 2h1v_A 267 YDNDYECKVVTDDI---G-ASYYRPEMPNAKPEFIDALATVVLKKLG 309 (310)
T ss_dssp TTTTTHHHHHHHHH---T-CEEECCCCCTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc---C-CeEEECCCCCCCHHHHHHHHHHHHHHhc
Confidence 11 123333332 2 4688899999999999999999998764
No 13
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=97.23 E-value=0.00089 Score=56.08 Aligned_cols=68 Identities=18% Similarity=0.306 Sum_probs=47.4
Q ss_pred eEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEE
Q 016721 287 VMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLL 366 (384)
Q Consensus 287 ~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~Vv 366 (384)
..||+.+||.+... -...+++.++.+.++ + .++.++|- ++-.|++++.|++|.++|+++|+
T Consensus 6 ~alllv~HGS~~~~-------~~~~~~~l~~~l~~~----~--~~V~~a~l------e~~~P~l~~~l~~l~~~G~~~vv 66 (126)
T 3lyh_A 6 HQIILLAHGSSDAR-------WCETFEKLAEPTVES----I--ENAAIAYM------ELAEPSLDTIVNRAKGQGVEQFT 66 (126)
T ss_dssp EEEEEEECCCSCHH-------HHHHHHHHHHHHHHH----S--TTCEEEES------SSSSSBHHHHHHHHHHTTCCEEE
T ss_pred cEEEEEeCCCCCHH-------HHHHHHHHHHHHHhh----c--CCEEEEEE------eCCCCCHHHHHHHHHHcCCCEEE
Confidence 47999999986432 122233333444433 3 36778874 34579999999999999999999
Q ss_pred EEeceee
Q 016721 367 AIPVRYT 373 (384)
Q Consensus 367 VvP~gFV 373 (384)
|+|+.++
T Consensus 67 vvPlfl~ 73 (126)
T 3lyh_A 67 VVPLFLA 73 (126)
T ss_dssp EEECCSC
T ss_pred EEecccC
Confidence 9998443
No 14
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=97.20 E-value=0.0019 Score=64.29 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=77.2
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceEEEee--ecC-----CCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHH
Q 016721 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM--RYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSS 235 (384)
Q Consensus 163 gggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~aM--rY~-----~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~ 235 (384)
..|.|-....++-++.|.++|.-. -++.+++ |.| .|+++++|++|.++|+++|+|+|.- |.+-...+.
T Consensus 207 ~~GDpY~~q~~~t~~lv~e~Lg~~---~~~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~g--FvsD~lETL 281 (359)
T 3hcn_A 207 NRGDPYPQEVSATVQKVMERLEYC---NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIA--FTSDHIETL 281 (359)
T ss_dssp TTTCSHHHHHHHHHHHHHHHTTTC---SCEEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTT--CCSCCCCCH
T ss_pred ccCCCHHHHHHHHHHHHHHHcCCC---CCEEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCc--cchhhHHhH
Confidence 346787777777788887777532 1244555 345 7999999999999999999999963 443332222
Q ss_pred HHH---H-HHHHHHhccCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 016721 236 IRV---L-QNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (384)
Q Consensus 236 ~~~---~-~~~~~~~~~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (384)
.+. . ++.+.+. +.-.+..++...++|.||+++++.|.+.++.
T Consensus 282 ~Eid~E~~~e~a~e~---G~~~~~rip~LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 282 YELDIEYSQVLAKEC---GVENIRRAESLNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp HHHCHHHHHHHHHHT---CCCEEEECCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC---CCceEEEcCCCCCCHHHHHHHHHHHHHHHhc
Confidence 221 1 1223332 2224889999999999999999999999876
No 15
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=97.15 E-value=0.00048 Score=68.58 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=73.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcCCCceEEEee--ecC-----CCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHH
Q 016721 164 GGSPLRKITDEQAQALKTALEAKNLPVNVYVGM--RYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 236 (384)
Q Consensus 164 ggSPL~~~T~~qa~~L~~~L~~~g~~~~V~~aM--rY~-----~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~ 236 (384)
.|.|-....++-++.|.++|.- +.++.+++ |.+ .|+++++|++| ++|+++|+|+|. -|++-...+..
T Consensus 213 ~GDpY~~q~~~ta~ll~e~lg~---~~~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~--gFvsD~lETL~ 286 (362)
T 1lbq_A 213 TGDAYPAEVAATVYNIMQKLKF---KNPYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPI--AFTSDHIETLH 286 (362)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTT---CSCEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECT--TCSSCCHHHHT
T ss_pred CCCcHHHHHHHHHHHHHHHcCC---CCCEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECC--eechhhHhhHH
Confidence 5678777777777777777742 11344455 667 69999999999 999999999995 35443333221
Q ss_pred HHHHHHHHHhccCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 016721 237 RVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (384)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (384)
+ +....++.....+. +..++...++|.||+++++.|++.+..
T Consensus 287 e-id~e~~e~~~~~G~-~~~~p~Ln~~p~fi~~L~~lv~~~l~~ 328 (362)
T 1lbq_A 287 E-IDLGVIGESEYKDK-FKRCESLNGNQTFIEGMADLVKSHLQS 328 (362)
T ss_dssp C-CCCCCCTTCTTGGG-EEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHhCCC-EEEcCCCCCCHHHHHHHHHHHHHHhcc
Confidence 1 10011111111123 889999999999999999999998864
No 16
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=97.13 E-value=0.0014 Score=54.90 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=48.2
Q ss_pred eEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEE
Q 016721 287 VMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLL 366 (384)
Q Consensus 287 ~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~Vv 366 (384)
..||+.+||..... -...+++.++.+.+++ +. ..+.++|-+. |-.|+++++|++| |+++|+
T Consensus 4 ~alllv~HGS~~~~-------~~~~~~~la~~l~~~~---~~-~~V~~a~le~-----~~~Psl~~~l~~l---g~~~v~ 64 (133)
T 2xws_A 4 RGLVIVGHGSQLNH-------YREVMELHRKRIEESG---AF-DEVKIAFAAR-----KRRPMPDEAIREM---NCDIIY 64 (133)
T ss_dssp EEEEEEECSCCCHH-------HHHHHHHHHHHHHHHT---SS-SEEEEEESST-----TCSSCHHHHHHHC---CCSEEE
T ss_pred ceEEEEECCCCCHH-------HHHHHHHHHHHHHhhC---CC-CcEEeeeeec-----CCCCCHHHHHHHc---CCCEEE
Confidence 47999999986322 1223334445555543 21 3578888663 3479999999999 999999
Q ss_pred EEeceeeecCc
Q 016721 367 AIPVRYTLLTE 377 (384)
Q Consensus 367 VvP~gFVsd~~ 377 (384)
|+|+ |++.|.
T Consensus 65 v~Pl-fl~~G~ 74 (133)
T 2xws_A 65 VVPL-FISYGL 74 (133)
T ss_dssp EEEC-CSSCCH
T ss_pred EEee-eeCCCc
Confidence 9998 665553
No 17
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=95.83 E-value=0.027 Score=49.06 Aligned_cols=68 Identities=21% Similarity=0.370 Sum_probs=46.5
Q ss_pred eEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHHHhCCCCeEE
Q 016721 287 VMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLL 366 (384)
Q Consensus 287 ~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~Gvk~Vv 366 (384)
..||+.+||.+... ....+++.++.+.+++ +. ..+.++|-...+ .|+++++|++| |+++|+
T Consensus 25 ~avlLv~HGS~~p~-------~~~~~~~la~~l~~~~---~~-~~V~~afle~~~-----~Psl~~~l~~l---G~~~Vv 85 (156)
T 1tjn_A 25 RGLVIVGHGSQLNH-------YREVMELHRKRIEESG---AF-DEVKIAFAARKR-----RPMPDEAIREM---NCDIIY 85 (156)
T ss_dssp EEEEEEECCTTSTT-------HHHHHHHHHHHHHHHT---SS-SEEEEEECSSSC-----SSCHHHHHHHC---CCSEEE
T ss_pred cCEEEEECCCCCHH-------HHHHHHHHHHHHHhhC---CC-CeEEEEEecCCC-----CCCHHHHHHHc---CCCEEE
Confidence 57999999975321 2334444555555553 22 357788865312 69999999999 999999
Q ss_pred EEeceee
Q 016721 367 AIPVRYT 373 (384)
Q Consensus 367 VvP~gFV 373 (384)
|+|+-++
T Consensus 86 VvPlfL~ 92 (156)
T 1tjn_A 86 VVPLFIS 92 (156)
T ss_dssp EEECCSS
T ss_pred EEechhc
Confidence 9996543
No 18
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=95.80 E-value=0.0073 Score=62.12 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=63.6
Q ss_pred HHHHHHHHHHhcCCCceEEEeeecCCC-----------CHHHHHHHHHhcCCCEEEEEecCCCcccCcHHH-HHHHHHHH
Q 016721 175 QAQALKTALEAKNLPVNVYVGMRYWYP-----------FTEEAVQQIKRDRITRLVVLPLYPQFSISTTGS-SIRVLQNI 242 (384)
Q Consensus 175 qa~~L~~~L~~~g~~~~V~~aMrY~~P-----------~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs-~~~~~~~~ 242 (384)
+.+++.+.|.+...--.|++|+.-..| ++++++++| |+++|+++|+|- +.|. ..+++...
T Consensus 156 ~~~~la~~L~e~lg~~~v~vaf~s~~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~Fl-----~dG~h~~~DI~~~ 227 (474)
T 2jh3_A 156 ALETHAQALRERGQFAGVEVVLESREALTPESHAASAVPLSEWPSRV---EAGQAVLVPFLT-----HLGKHAAERLQQA 227 (474)
T ss_dssp HHHHHHHHHHHHCCSSEEEEEECCCC---------CCEEGGGGGGGC---CSSCEEEEECSS-----CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCCCcccccccCCHHHHHHHc---CCCeEEEEEeec-----cCCcchHHHHHHH
Confidence 334444444433111247778866677 999999988 999999999973 3333 23344444
Q ss_pred HHHhcc-CC-CCCEEEecCCCCCHHHHHHHHHHHHHHH
Q 016721 243 FREDAY-LS-RLPVSIIRSWYQREGYVNSMADLIQKEL 278 (384)
Q Consensus 243 ~~~~~~-~~-~~~l~~I~~~~~~p~yI~ala~~I~~~l 278 (384)
++.... .+ ++.+..++....+|.++++++++|++++
T Consensus 228 ~~~~~~~~p~G~~v~~~~~LG~~p~~~~ll~~rv~eal 265 (474)
T 2jh3_A 228 LAQAAERFPQAPPLHVGGPVGEHPAVAEVVLALAAEGR 265 (474)
T ss_dssp HHHHHHHCTTCCCEEECCCGGGSTTHHHHHHHHHHTTC
T ss_pred HHHHHHhccCCcEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 332211 12 4678899999999999999999998775
No 19
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=65.10 E-value=6.3 Score=36.10 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=26.2
Q ss_pred ceEEEEEccCCCC--CcchHHHHHHhhcCCCCcccCChh
Q 016721 99 KVGVLLLNLGGPD--TLHDVQPFLFNLFADPDIIRLPRL 135 (384)
Q Consensus 99 K~aVLLvNlGtP~--s~~dV~~fL~~~~~D~~Vi~lP~~ 135 (384)
..++ .|+|+|+ |..|+-+.+.+.+.-|.++++|.+
T Consensus 211 ~~g~--yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~ 247 (298)
T 4b4o_A 211 VHGV--LNGVAPSSATNAEFAQTFGAALGRRAFIPLPSA 247 (298)
T ss_dssp CCEE--EEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHH
T ss_pred CCCe--EEEECCCccCHHHHHHHHHHHhCcCCcccCCHH
Confidence 4564 5666666 778999999999987777778864
No 20
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=41.85 E-value=15 Score=27.71 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHhcCCC
Q 016721 173 DEQAQALKTALEAKNLP 189 (384)
Q Consensus 173 ~~qa~~L~~~L~~~g~~ 189 (384)
++.|++|.++|...|.+
T Consensus 20 ~~~A~~l~~~L~~~G~~ 36 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFD 36 (81)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 45667777777665543
No 21
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=41.22 E-value=1.4e+02 Score=26.82 Aligned_cols=70 Identities=7% Similarity=0.031 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 169 ~~~T~~qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
...|+.+++.+.+.|.+.|.++.+ ---+....+++..+++.+ +|.||+. +|-|-.+.++.....+++.+.
T Consensus 42 ~s~n~~L~~~~~~~l~~~g~ev~~--~dL~~~~Dv~~~~~~l~~--aD~iv~~--~P~y~~~~p~~lK~~iD~v~~ 111 (218)
T 3rpe_A 42 GALNLTLTNVAADFLRESGHQVKI--TTVDQGYDIESEIENYLW--ADTIIYQ--MPAWWMGEPWILKKYIDEVFT 111 (218)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEE--EEGGGCCCHHHHHHHHHH--CSEEEEE--EECBTTBCCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEEEE--EECCCccCHHHHHHHHHh--CCEEEEE--CChHhccCCHHHHHHHHHHHh
Confidence 468888999998888877766543 333345567777777764 4655544 444444555555455555544
No 22
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=39.63 E-value=93 Score=28.63 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=15.6
Q ss_pred EEEeeecCCCCHHHHHHHHHhcCCCEEEEEecCCC
Q 016721 192 VYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQ 226 (384)
Q Consensus 192 V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPq 226 (384)
|.++|.=|.-|.- ++-.++++|++=+-++-+||+
T Consensus 7 vvvl~SGGkDSs~-al~~l~~~G~eV~~L~~~~~~ 40 (237)
T 3rjz_A 7 VAVLYSGGKDSNY-ALYWAIKNRFSVKFLVTMVSE 40 (237)
T ss_dssp EEEECCSSHHHHH-HHHHHHHTTCEEEEEEEEECC
T ss_pred EEEEecCcHHHHH-HHHHHHHcCCeEEEEEEEcCC
Confidence 3444444433332 233455667643334456665
No 23
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=34.99 E-value=36 Score=25.15 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHhcCCC
Q 016721 173 DEQAQALKTALEAKNLP 189 (384)
Q Consensus 173 ~~qa~~L~~~L~~~g~~ 189 (384)
++.|+++.+.|...|.+
T Consensus 20 ~~~A~~~~~~L~~~g~~ 36 (79)
T 1x60_A 20 KANADSLASNAEAKGFD 36 (79)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 45667777777665543
No 24
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=34.84 E-value=65 Score=29.79 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhc-CCCceEEEeeecCCCC--------------------HHHHHHHHHhcCCCEEEEEecC
Q 016721 173 DEQAQALKTALEAK-NLPVNVYVGMRYWYPF--------------------TEEAVQQIKRDRITRLVVLPLY 224 (384)
Q Consensus 173 ~~qa~~L~~~L~~~-g~~~~V~~aMrY~~P~--------------------i~eaL~~L~~~G~~~IvvlPLy 224 (384)
+..++++.++|.++ +.++-|...+.|+.++ +.|.++.|.+.|++++|++-=+
T Consensus 48 ~~ia~~~a~~l~~~~~~~~lv~P~i~yG~~s~~h~~fPGTisl~~~tl~~~l~di~~sl~~~G~rrlvivNgH 120 (254)
T 3lub_A 48 HDIAVEAAELALSRSGVRCMVMPPVPFGAHNPGQRELPFCIHTRYATQQAILEDIVSSLHVQGFRKLLILSGH 120 (254)
T ss_dssp HHHHHHHHHHHHHHHCCCEEECCCBCCBCCCTTTTTSTTCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEEESC
T ss_pred HHHHHHHHHhhhhhcCCCEEEeCCccccCCCccccCcCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34555555555543 4455566666666511 4566666777788888877765
No 25
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.38 E-value=2e+02 Score=27.10 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=34.9
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCc---ccCcHHHHHHHHHHHHH
Q 016721 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQF---SISTTGSSIRVLQNIFR 244 (384)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqy---S~sTtgs~~~~~~~~~~ 244 (384)
..++|..|- +..+++++++.. .+.|++-++++| |.| ...|-...++.+....+
T Consensus 76 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--Pyy~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 76 GRVPVIVTT--SHYSTQVCAARSLRAQQLGAAMVMAMP--PYHGATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TSSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEECC--SCBTTTBCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCchHHHHHHHHHHHHHcCCCEEEEcC--CCCccCCCCCHHHHHHHHHHHHH
Confidence 356676664 678899988744 457999999887 556 34455555555555444
No 26
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=30.10 E-value=1.5e+02 Score=28.65 Aligned_cols=49 Identities=10% Similarity=0.028 Sum_probs=31.4
Q ss_pred HHHHHHhhcCCCCCeeEEEecCccCCCCCC-CcHHHHHHHHHhCCCCeEEEE
Q 016721 318 LIMQRLKDRGINNDHTLAYQSRVGPVKWLK-PYTDEVLVELGQKGVKSLLAI 368 (384)
Q Consensus 318 ~i~~~L~~~g~~~~~~lafQSr~G~~~WL~-P~t~d~L~~L~~~Gvk~VvVv 368 (384)
.+.+.|..+|++ ---+++||+++...+.. .++.+.|+++++.|+ .|.|-
T Consensus 195 ~lv~~l~~~gvp-idgiG~Q~H~~~~~~p~~~~~~~~l~~~a~lGl-~v~iT 244 (335)
T 4f8x_A 195 QLVSNLRKRGIR-IDGVGLESHFIVGETPSLADQLATKQAYIKANL-DVAVT 244 (335)
T ss_dssp HHHHHHHHTTCC-CCEEEECCEEETTCCCCHHHHHHHHHHHHHTTC-EEEEE
T ss_pred HHHHHHHHCCCC-cceeeeeeeecCCCCCCHHHHHHHHHHHHHcCC-eeEEe
Confidence 344555555763 12699999997544322 256688999999996 55553
No 27
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=29.69 E-value=2.6e+02 Score=25.59 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=36.0
Q ss_pred eeecCCCCHHHHHHHHHhcCCCEEEEEecCCCc-ccCcHHHHHHHHHHHHHH
Q 016721 195 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQF-SISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 195 aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqy-S~sTtgs~~~~~~~~~~~ 245 (384)
+..-|+|..++++++..+.|+++++++..-+.| ....+-.+-..+.+.+++
T Consensus 60 av~~G~~~a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~ 111 (252)
T 1efp_B 60 AVSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARA 111 (252)
T ss_dssp EEEEESGGGHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHH
T ss_pred EEEeCChhHHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHh
Confidence 455566678889999888899999999866766 444454444555555554
No 28
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.53 E-value=3.1e+02 Score=25.45 Aligned_cols=52 Identities=19% Similarity=0.180 Sum_probs=35.5
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
.++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+
T Consensus 69 rvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 69 RIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFKTVAQ 123 (294)
T ss_dssp SSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 56676553 678899998754 457999998887 44766666555555555544
No 29
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=28.94 E-value=2.8e+02 Score=25.91 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=36.2
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHH
Q 016721 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~ 245 (384)
..++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+.
T Consensus 79 grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 79 GKIKLIAHV--GCVSTAESQQLAASAKRYGFDAVSAVT--PFYYPFSFEEHCDHYRAIIDS 135 (303)
T ss_dssp TTSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhCCCCEEEecC--CCCCCCCHHHHHHHHHHHHHh
Confidence 356676664 678899998754 456999998887 446666665555555555443
No 30
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=28.77 E-value=3.2e+02 Score=25.53 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=35.2
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
.++|..| -+..+++++++.. .+.|++-++++| |.|...+-...++.+.+..+
T Consensus 85 rvpviaG--vg~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 85 RAKLIAG--VGTNNTRTSVELAEAAASAGADGLLVVT--PYYSKPSQEGLLAHFGAIAA 139 (304)
T ss_dssp TSEEEEE--CCCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEec--CCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 5667655 3678899998754 456999998887 44666665555555555444
No 31
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.59 E-value=2.9e+02 Score=25.54 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=36.0
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~ 245 (384)
.++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+.
T Consensus 69 r~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia~a 124 (289)
T 2yxg_A 69 RVQVIAGA--GSNCTEEAIELSVFAEDVGADAVLSIT--PYYNKPTQEGLRKHFGKVAES 124 (289)
T ss_dssp SSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEeC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHh
Confidence 56676654 678899998754 456999998887 447666666556655555443
No 32
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=28.50 E-value=2.4e+02 Score=26.01 Aligned_cols=52 Identities=13% Similarity=0.022 Sum_probs=38.1
Q ss_pred EeeecCCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHHh
Q 016721 194 VGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRED 246 (384)
Q Consensus 194 ~aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~~ 246 (384)
.+..-|+|..++++++..+.|+++++++. -|.|....+-.+-..+.+.+++.
T Consensus 60 ~av~~G~~~~~~~lr~ala~GaD~vi~v~-d~~~~~~~~~~~a~~La~~i~~~ 111 (264)
T 1o97_C 60 VVVSVGPDRVDESLRKCLAKGADRAVRVW-DDAAEGSDAIVVGRILTEVIKKE 111 (264)
T ss_dssp EEEEESCGGGHHHHHHHHHTTCSEEEEEC-CGGGTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEeCchhHHHHHHHHHhcCCCEEEEEc-CcccccCCHHHHHHHHHHHHHhc
Confidence 34556777789999999889999999997 66666556655556666666553
No 33
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.26 E-value=3e+02 Score=25.50 Aligned_cols=53 Identities=13% Similarity=-0.011 Sum_probs=35.3
Q ss_pred CCceEEEeeecCCCCHHHHHHHHH---hcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 188 LPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eaL~~L~---~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
..++|..|- +..+++++++..+ +.|++-++++| |.|...+-...++.+.+..+
T Consensus 72 grvpviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 72 DQIALIAQV--GSVNLKEAVELGKYATELGYDCLSAVT--PFYYKFSFPEIKHYYDTIIA 127 (293)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356676654 7788999987543 46999998887 44666665555555555444
No 34
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=27.98 E-value=3.2e+02 Score=25.70 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=35.2
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~ 245 (384)
.++|..| -+..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+.
T Consensus 92 rvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a 147 (314)
T 3qze_A 92 RIPVIAG--TGANSTREAVALTEAAKSGGADACLLVT--PYYNKPTQEGMYQHFRHIAEA 147 (314)
T ss_dssp SSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHh
Confidence 4666554 5678899988754 457999998886 446666655555555555443
No 35
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=27.49 E-value=3.4e+02 Score=25.19 Aligned_cols=52 Identities=15% Similarity=0.123 Sum_probs=34.9
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
.++|..| -+..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+
T Consensus 76 rvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 130 (297)
T 3flu_A 76 RVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVV--PYYNKPSQEGIYQHFKTIAE 130 (297)
T ss_dssp SSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 5667665 4678899998854 457999998887 44665665555555555444
No 36
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=27.33 E-value=38 Score=33.02 Aligned_cols=68 Identities=18% Similarity=0.301 Sum_probs=37.2
Q ss_pred CEEEecCCCCCHHHHHHHHHHHH---HHHhhcCCCCceEEEEeeCCCchhhhc---cCC-------CchHHHHHHHHHHH
Q 016721 253 PVSIIRSWYQREGYVNSMADLIQ---KELGKFQKPEEVMIFFSAHGVPVSYVE---KAG-------DPYRDQMEECIYLI 319 (384)
Q Consensus 253 ~l~~I~~~~~~p~yI~ala~~I~---~~l~~~~~~~~~~LLFSaHGlP~~~v~---~~G-------DpY~~q~~~T~~~i 319 (384)
++.+..+-=-+|.-++.|.++=- +.+.+. +++..+||+|||+|....+ ++| -|+...++..++..
T Consensus 44 ~iy~~g~IVHN~~Vv~~L~~~Gv~~ve~l~ev--~~g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP~V~Kvh~~v~~~ 121 (328)
T 3szu_A 44 PIYVRHEVVHNRYVVDSLRERGAIFIEQISEV--PDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARA 121 (328)
T ss_dssp CEEEESCSSSCHHHHHHHHHTTEEEESSGGGS--CTTCEEEECTTCCCHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHH
T ss_pred CEEEeCCCccCHHHHHHHHHCCCEEecchhhC--CCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCcchHHHHHHHHHH
Confidence 35555555555555555543200 112222 2345799999999987532 234 36766666666555
Q ss_pred HHH
Q 016721 320 MQR 322 (384)
Q Consensus 320 ~~~ 322 (384)
.++
T Consensus 122 ~~~ 124 (328)
T 3szu_A 122 SRR 124 (328)
T ss_dssp HHH
T ss_pred HhC
Confidence 554
No 37
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=26.81 E-value=59 Score=26.30 Aligned_cols=40 Identities=15% Similarity=0.349 Sum_probs=28.5
Q ss_pred HHHhcCCCceEEEeeecCCCCHHHHHHHHHhcCCCEEEEEec
Q 016721 182 ALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPL 223 (384)
Q Consensus 182 ~L~~~g~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~IvvlPL 223 (384)
.|.+.|+++.| +-+|+-.|+-++.+.++. .++++|+++=.
T Consensus 34 ~L~~~Gi~v~v-i~~r~~~P~d~~~l~~~~-~~~~~vvvvE~ 73 (118)
T 3ju3_A 34 DLKEEGISANL-LYLKMFSPFPTEFVKNVL-SSANLVIDVES 73 (118)
T ss_dssp HHHHTTCCEEE-EEECSSCSCCHHHHHHHH-TTCSCCCCCCC
T ss_pred HHHHCCCceEE-EEECeEecCCHHHHHHHH-cCCCEEEEEEC
Confidence 56666766554 667888899888888876 46777776644
No 38
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=26.74 E-value=2.7e+02 Score=25.81 Aligned_cols=51 Identities=16% Similarity=0.190 Sum_probs=34.4
Q ss_pred CceEEEeeecCCCCHHHHHHHHH---hcCCCEEEEEecCCCcccCcHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNIF 243 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L~---~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~ 243 (384)
.++|..|- +..+++++++..+ +.|++-++++| |.|...|-...++.+.+..
T Consensus 70 r~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia 123 (292)
T 2ojp_A 70 RIPVIAGT--GANATAEAISLTQRFNDSGIVGCLTVT--PYYNRPSQEGLYQHFKAIA 123 (292)
T ss_dssp SSCEEEEC--CCSSHHHHHHHHHHTTTSSCSEEEEEC--CCSSCCCHHHHHHHHHHHH
T ss_pred CCcEEEec--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 56676554 7789999988654 46999998887 4476666555555554443
No 39
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.69 E-value=2.6e+02 Score=25.75 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=35.6
Q ss_pred eeecCCCCHHHHHHHHHhcCCCEEEEEecCCCc-ccCcHHHHHHHHHHHHHH
Q 016721 195 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQF-SISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 195 aMrY~~P~i~eaL~~L~~~G~~~IvvlPLyPqy-S~sTtgs~~~~~~~~~~~ 245 (384)
+..-|+|..++++++..+.|+++++++..-+.| ....+-.+-+.+.+.+++
T Consensus 63 av~~G~~~a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~ 114 (255)
T 1efv_B 63 AVSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEK 114 (255)
T ss_dssp EEEEESTTHHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCChhHHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHh
Confidence 455667788999999888899999999866655 334444444455555554
No 40
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=26.51 E-value=3.3e+02 Score=25.40 Aligned_cols=52 Identities=12% Similarity=0.173 Sum_probs=34.9
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
.++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+
T Consensus 81 rvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 135 (301)
T 1xky_A 81 RVPVIAGT--GSNNTHASIDLTKKATEVGVDAVMLVA--PYYNKPSQEGMYQHFKAIAE 135 (301)
T ss_dssp SSCEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CceEEeCC--CCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 56676553 678899998754 457999988887 44766665555555555443
No 41
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=25.51 E-value=4.2e+02 Score=24.74 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceEEEeeecCCCCHHHHHHHHHhcCCCEEEE
Q 016721 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVV 220 (384)
Q Consensus 169 ~~~T~~qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eaL~~L~~~G~~~Ivv 220 (384)
..+.+..++.+++.+.+.|.++.....+..+.......+.++++.+.+-|++
T Consensus 174 ~~~g~~~~~~~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~~d~v~~ 225 (419)
T 3h5l_A 174 GIYSVNIANAIRDGAGEYGYDVSLFETVAIPVSDWGPTLAKLRADPPAVIVV 225 (419)
T ss_dssp SHHHHHHHHHHHHHGGGGTCEEEEEEECCSSCSCCHHHHHHHHHSCCSEEEE
T ss_pred cchhHHHHHHHHHHHHHcCCeEEEEecCCCCCccHHHHHHHHHhcCCCEEEE
Confidence 4677888888998998877654333344445677888999999999885444
No 42
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=24.95 E-value=3.6e+02 Score=25.35 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=34.9
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
..++|..|- +. +++++++.. .+.|++-++++| |.|...+-...++.+.+..+
T Consensus 80 grvpViaGv--g~-st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 80 GRATVVAGI--GY-SVDTAIELGKSAIDSGADCVMIHQ--PVHPYITDAGAVEYYRNIIE 134 (314)
T ss_dssp TSSEEEEEE--CS-SHHHHHHHHHHHHHTTCSEEEECC--CCCSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEecC--Cc-CHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356777765 56 899988754 457999988887 44666665555555555444
No 43
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=24.23 E-value=2.9e+02 Score=25.84 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=33.2
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIF 243 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~ 243 (384)
.++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..
T Consensus 81 rvpViaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va 134 (306)
T 1o5k_A 81 KIPVIVGA--GTNSTEKTLKLVKQAEKLGANGVLVVT--PYYNKPTQEGLYQHYKYIS 134 (306)
T ss_dssp SSCEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHH
T ss_pred CCeEEEcC--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 46666554 677889988754 346999888887 4466666555555444443
No 44
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=24.15 E-value=3.5e+02 Score=25.45 Aligned_cols=53 Identities=19% Similarity=0.207 Sum_probs=35.4
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~ 245 (384)
.++|..| -+..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+.
T Consensus 91 rvpViaG--vg~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~a 146 (315)
T 3si9_A 91 RVPVVAG--AGSNSTSEAVELAKHAEKAGADAVLVVT--PYYNRPNQRGLYTHFSSIAKA 146 (315)
T ss_dssp SSCBEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEe--CCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHc
Confidence 5666655 4678899998754 457999998887 446666655555555555443
No 45
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=23.76 E-value=2.9e+02 Score=25.69 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=35.8
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~ 245 (384)
.++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+.
T Consensus 69 rvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a 124 (297)
T 2rfg_A 69 RVPVIAGA--GSNNPVEAVRYAQHAQQAGADAVLCVA--GYYNRPSQEGLYQHFKMVHDA 124 (297)
T ss_dssp SSCBEEEC--CCSSHHHHHHHHHHHHHHTCSEEEECC--CTTTCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEcc--CCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHh
Confidence 45666553 678899998754 456999988887 457666666666666555443
No 46
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=23.69 E-value=3.8e+02 Score=24.73 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=34.3
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
.++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+
T Consensus 69 r~pviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia~ 123 (292)
T 2vc6_A 69 RVPVIAGA--GSNSTAEAIAFVRHAQNAGADGVLIVS--PYYNKPTQEGIYQHFKAIDA 123 (292)
T ss_dssp SSCBEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEec--CCccHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 45666553 677889988754 457999988887 44666665555555555444
No 47
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=23.52 E-value=3.4e+02 Score=24.47 Aligned_cols=101 Identities=9% Similarity=0.121 Sum_probs=60.6
Q ss_pred hhhcccC--CCCchhHHHHHHHHHHHHHHHhc-CCCceEEEeeec-CCCCHHHHHHHHHhcCCCEEEEEecCCCcccCcH
Q 016721 157 EGYAAIG--GGSPLRKITDEQAQALKTALEAK-NLPVNVYVGMRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTT 232 (384)
Q Consensus 157 ~~Y~~Ig--ggSPL~~~T~~qa~~L~~~L~~~-g~~~~V~~aMrY-~~P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTt 232 (384)
..|+-.+ .-||=..=.++.++ -|.+. ++...++.|=-| ..|...++|+.|.+.|++ |-.|- .
T Consensus 98 ~~Y~vTwy~SWSPC~~CA~~v~~----FL~~~~~v~L~If~aRLY~~~~~~~~gLr~L~~aG~~---v~iM~-------~ 163 (203)
T 3v4k_A 98 QDYRVTCFTSWSPCFSCAQEMAK----FISKNKHVSLCIKTARIYDDQGRCQEGLRTLAEAGAK---ISIMT-------Y 163 (203)
T ss_pred CeEEEEEEEeCCChHHHHHHHHH----HHhhCCCeEEEEEEEeecccCchHHHHHHHHHHCCCe---EEecC-------H
Confidence 4576664 35788775555444 66554 567778876544 479999999999999975 22232 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCEEEecCCCCCHHHHHHHHHHHHHHH
Q 016721 233 GSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKEL 278 (384)
Q Consensus 233 gs~~~~~~~~~~~~~~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l 278 (384)
......++..+...+ .--.+|.+-+...+.+..++++-|
T Consensus 164 ~ef~~CW~~FV~nqg-------~pF~PW~~L~en~~~l~~~L~~IL 202 (203)
T 3v4k_A 164 SEFKHCWDTFVDHQG-------APFQPWDGLDEHSQDLSGRLRAIL 202 (203)
T ss_pred HHHHHHHHHHccCCC-------CCCCchhHHHHHHHHHHHHHHHHh
Confidence 221222323222211 113458888888888887776654
No 48
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.60 E-value=3.3e+02 Score=22.61 Aligned_cols=23 Identities=13% Similarity=0.076 Sum_probs=18.7
Q ss_pred CCch--hHHHHHHHHHHHHHHHhcC
Q 016721 165 GSPL--RKITDEQAQALKTALEAKN 187 (384)
Q Consensus 165 gSPL--~~~T~~qa~~L~~~L~~~g 187 (384)
+||- ...|+..++.+.+.|.+.|
T Consensus 9 ~S~~~~~s~t~~la~~~~~~l~~~g 33 (201)
T 1t5b_A 9 SSILAGYSQSGQLTDYFIEQWREKH 33 (201)
T ss_dssp CCSSGGGCHHHHHHHHHHHHHHHHC
T ss_pred eCCCCCCChHHHHHHHHHHHHHHhC
Confidence 5776 4789999999998888765
No 49
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=22.52 E-value=3.6e+02 Score=26.47 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=19.7
Q ss_pred CCCCCeeEEEecC-------ccCCCCCCCcHHHHHHHHHhCCCCeE
Q 016721 327 GINNDHTLAYQSR-------VGPVKWLKPYTDEVLVELGQKGVKSL 365 (384)
Q Consensus 327 g~~~~~~lafQSr-------~G~~~WL~P~t~d~L~~L~~~Gvk~V 365 (384)
|+ +.+.++-||- +++.. ..-.+.+.++.+.+.|+++|
T Consensus 163 G~-~rislGvQS~~~~~l~~i~R~~-~~~~~~~ai~~~r~~G~~~v 206 (457)
T 1olt_A 163 GF-NRLSMGVQDFNKEVQRLVNREQ-DEEFIFALLNHAREIGFTST 206 (457)
T ss_dssp TC-CEEEEEEECCCHHHHHHHTCCC-CHHHHHHHHHHHHHTTCCSC
T ss_pred CC-CEEEEeeccCCHHHHHHhCCCC-CHHHHHHHHHHHHHcCCCcE
Confidence 55 4567777773 12211 12345556666666676644
No 50
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=22.50 E-value=3.8e+02 Score=25.55 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=34.4
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~ 244 (384)
.++|..| -+..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+
T Consensus 100 rvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA~ 154 (343)
T 2v9d_A 100 RVPVLIG--TGGTNARETIELSQHAQQAGADGIVVIN--PYYWKVSEANLIRYFEQVAD 154 (343)
T ss_dssp SSCEEEE--CCSSCHHHHHHHHHHHHHHTCSEEEEEC--CSSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 5666655 4668899988754 346999988887 44666665555555555443
No 51
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=21.41 E-value=4.7e+02 Score=23.83 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHHhccCCCCCEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 016721 201 PFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (384)
Q Consensus 201 P~i~eaL~~L~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~~~~~~~~~l~~I~~~~~~p~yI~ala~~I~~~l~~ 280 (384)
+..++-++.|++.|++-|-+ |+. ++... +. -.+|.-++.+++.+-+.|..+.+
T Consensus 41 ~~~~~d~~~l~~~G~n~vRi-~i~--w~~~~------------------~~-----~~~~~~~~~~~~~~d~~v~~a~~- 93 (320)
T 3nco_A 41 YIEDEYFKIIKERGFDSVRI-PIR--WSAHI------------------SE-----KYPYEIDKFFLDRVKHVVDVALK- 93 (320)
T ss_dssp CCCHHHHHHHHHHTCCEEEE-CCC--GGGSB------------------CS-----STTCCBCHHHHHHHHHHHHHHHH-
T ss_pred cCCHHHHHHHHHCCCCEEEE-eee--hHHhc------------------CC-----CCCCccCHHHHHHHHHHHHHHHH-
Confidence 44578899999999987766 432 11000 00 01244466666666655555443
Q ss_pred cCCCCceEEEEeeCCCchhhhccCCCchHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCC-------cHHHH
Q 016721 281 FQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKP-------YTDEV 353 (384)
Q Consensus 281 ~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~T~~~i~~~L~~~g~~~~~~lafQSr~G~~~WL~P-------~t~d~ 353 (384)
. ...+|+..|..+.-. ...+.+.+...+..+.|+++++ + .+-.+.|+- +.+++... ...+.
T Consensus 94 ~----Gi~vildlh~~~~~~--~~~~~~~~~~~~~~~~ia~~~~--~--~~~vv~~~l--~NEP~~~~~~~~~~~~~~~~ 161 (320)
T 3nco_A 94 N----DLVVIINCHHFEELY--QAPDKYGPVLVEIWKQVAQAFK--D--YPDKLFFEI--FNEPAQNLTPTKWNELYPKV 161 (320)
T ss_dssp T----TCEEEEECCCCHHHH--HCHHHHHHHHHHHHHHHHHHHT--T--SCTTEEEEC--CSCCCTTSCHHHHHHHHHHH
T ss_pred C----CCEEEEEcCCCcccc--cCcHHHHHHHHHHHHHHHHHHc--C--CCceEEEEe--ccCCCCCCCHHHHHHHHHHH
Confidence 2 356888888876432 1112366677777777888773 1 123457765 44444321 24444
Q ss_pred HHHHHhCCCCeEEEEe
Q 016721 354 LVELGQKGVKSLLAIP 369 (384)
Q Consensus 354 L~~L~~~Gvk~VvVvP 369 (384)
++...+.+.+++++++
T Consensus 162 ~~~IR~~dp~~~i~v~ 177 (320)
T 3nco_A 162 LGEIRKTNPSRIVIID 177 (320)
T ss_dssp HHHHHHHCSSCCEEEE
T ss_pred HHHHHhcCCCcEEEEC
Confidence 5555555667777765
No 52
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=21.05 E-value=1.5e+02 Score=27.65 Aligned_cols=43 Identities=9% Similarity=0.072 Sum_probs=28.2
Q ss_pred HHHHHHhcCCCceEEEeeecCCC--------CHHHHHHHHHhcCCCEEEEE
Q 016721 179 LKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (384)
Q Consensus 179 L~~~L~~~g~~~~V~~aMrY~~P--------~i~eaL~~L~~~G~~~Ivvl 221 (384)
+-+...+.|..+..++++-|+.| ++.+.++++.+.|++.|.+-
T Consensus 129 ~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 129 VLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp HHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 33345566888888888887765 33444555668899876554
No 53
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=20.90 E-value=3.9e+02 Score=25.38 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=35.9
Q ss_pred CceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCcccCcHHHHHHHHHHHHHH
Q 016721 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (384)
Q Consensus 189 ~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~sTtgs~~~~~~~~~~~ 245 (384)
.++|..| -+..+++++++.. .+.|++-++++| |.|...|-...++.+.+..+.
T Consensus 103 rvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA~a 158 (332)
T 2r8w_A 103 RRTLMAG--IGALRTDEAVALAKDAEAAGADALLLAP--VSYTPLTQEEAYHHFAAVAGA 158 (332)
T ss_dssp SSEEEEE--ECCSSHHHHHHHHHHHHHHTCSEEEECC--CCSSCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHh
Confidence 5667665 3668899998754 456999988887 447666666666666555443
No 54
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=20.81 E-value=4.3e+02 Score=23.20 Aligned_cols=21 Identities=10% Similarity=-0.008 Sum_probs=15.4
Q ss_pred CHHHHHHHHHhcCCCEEEEEe
Q 016721 202 FTEEAVQQIKRDRITRLVVLP 222 (384)
Q Consensus 202 ~i~eaL~~L~~~G~~~IvvlP 222 (384)
.++++++.+++.|++.|=+..
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~ 36 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIELWG 36 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEEEH
T ss_pred CHHHHHHHHHHhCCCEEEEcc
Confidence 577788888888888776643
No 55
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.67 E-value=4.5e+02 Score=24.28 Aligned_cols=55 Identities=15% Similarity=0.255 Sum_probs=36.0
Q ss_pred CCCceEEEeeecCCCCHHHHHHHH---HhcCCCEEEEEecCCCccc-CcHHHHHHHHHHHHHH
Q 016721 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSI-STTGSSIRVLQNIFRE 245 (384)
Q Consensus 187 g~~~~V~~aMrY~~P~i~eaL~~L---~~~G~~~IvvlPLyPqyS~-sTtgs~~~~~~~~~~~ 245 (384)
+..++|..| -+..+++++++.. .+.|++-++++| |.|.. .|-...++.+.+..+.
T Consensus 70 ~gr~pviaG--vg~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 70 IAPSRIVTG--VLVDSIEDAADQSAEALNAGARNILLAP--PSYFKNVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp CCGGGEEEE--ECCSSHHHHHHHHHHHHHTTCSEEEECC--CCSSCSCCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEe--CCCccHHHHHHHHHHHHhcCCCEEEEcC--CcCCCCCCHHHHHHHHHHHHHh
Confidence 335667666 3667899988754 356999888886 44666 5655555555555443
No 56
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=20.41 E-value=1.3e+02 Score=28.56 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=29.4
Q ss_pred HHHHHHhcCCCceEEEeeecCCC--------CHHHHHHHHHhcCCCEEEEE
Q 016721 179 LKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (384)
Q Consensus 179 L~~~L~~~g~~~~V~~aMrY~~P--------~i~eaL~~L~~~G~~~Ivvl 221 (384)
.-+...+.|.++.+++.|.|+.| ++.+.++++.+.|+++|.+-
T Consensus 127 ~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (307)
T 1ydo_A 127 VNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG 177 (307)
T ss_dssp HHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred HHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 33345566777888888887766 44556667778899876554
No 57
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=20.39 E-value=4.5e+02 Score=23.21 Aligned_cols=122 Identities=8% Similarity=0.063 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHhcCCCEEEEEec-CCCcccCcHHHHHHHHHHHHHHhccCCCCCEEEe-cC-----CC-CCHHHHHHHHH
Q 016721 201 PFTEEAVQQIKRDRITRLVVLPL-YPQFSISTTGSSIRVLQNIFREDAYLSRLPVSII-RS-----WY-QREGYVNSMAD 272 (384)
Q Consensus 201 P~i~eaL~~L~~~G~~~IvvlPL-yPqyS~sTtgs~~~~~~~~~~~~~~~~~~~l~~I-~~-----~~-~~p~yI~ala~ 272 (384)
..++++++.+++.|++.|=+.+- +|.+ +....+.+.+.+++.+ +.+..+ .. +. .++...+...+
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~~~~~l~~~g----l~i~~~~~~~~~~~l~~~d~~~r~~~~~ 88 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASPLPFY----SDIQINELKACAHGNG----ITLTVGHGPSAEQNLSSPDPDIRKNAKA 88 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTTGGGC----CHHHHHHHHHHHHHTT----CEEEEEECCCGGGCTTCSCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecCcccCCc----CHHHHHHHHHHHHHcC----CeEEEeecCCCCcCCCCCCHHHHHHHHH
Confidence 47899999999999998877653 2222 3445567777776643 344432 11 21 35655555555
Q ss_pred HHHHHHh---hcCCCCceEEEEeeCC-CchhhhccCCCch---HHHHHHHHHHHHHHHhhcCCCCCeeEEEecC
Q 016721 273 LIQKELG---KFQKPEEVMIFFSAHG-VPVSYVEKAGDPY---RDQMEECIYLIMQRLKDRGINNDHTLAYQSR 339 (384)
Q Consensus 273 ~I~~~l~---~~~~~~~~~LLFSaHG-lP~~~v~~~GDpY---~~q~~~T~~~i~~~L~~~g~~~~~~lafQSr 339 (384)
.+++.++ .++- + .++...|+ .|..+- .+..+ .+++.+..+.+++..... .+.+++...
T Consensus 89 ~~~~~i~~a~~lG~-~--~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~a~~~----Gv~l~lEn~ 153 (294)
T 3vni_A 89 FYTDLLKRLYKLDV-H--LIGGALYSYWPIDYT--KTIDKKGDWERSVESVREVAKVAEAC----GVDFCLEVL 153 (294)
T ss_dssp HHHHHHHHHHHHTC-C--EEEESTTSCSSCCTT--SCCCHHHHHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred HHHHHHHHHHHhCC-C--eeeccccCCCCCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHc----CCEEEEEec
Confidence 5555443 3332 2 34434564 332221 12233 344444555555554333 467888775
Done!