BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016722
(384 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351726622|ref|NP_001236365.1| squalene synthase [Glycine max]
gi|2463569|dbj|BAA22559.1| squalene synthase [Glycine max]
Length = 413
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/376 (88%), Positives = 358/376 (95%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLKMA+R AEKQIPPEPHWAFCY+MLHKVSRSFALVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGI 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWS+YVNKL
Sbjct: 181 SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMH EDCLKYM+ALRD IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHPEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+PK++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|255641455|gb|ACU21003.1| unknown [Glycine max]
Length = 413
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/376 (88%), Positives = 358/376 (95%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLKMA+R AEKQIPPEPHWAF Y+MLHKVSRSFALVIQQLGT
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFRYTMLHKVSRSFALVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWS+YVNKL
Sbjct: 181 SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMH EDCLKYM+ALRD IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+PK++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|295822131|gb|ADG36719.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822135|gb|ADG36721.1| squalene synthase 2 [Glycyrrhiza uralensis]
Length = 412
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/380 (87%), Positives = 359/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|356538706|ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]
Length = 413
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/376 (87%), Positives = 356/376 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++PDD YPLLKLKMA+R AEKQIPPEPHWAFCY+MLHKVSRSFALVIQQLGT
Sbjct: 1 MGSLGAILKNPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMH EDCL YM+ALRD IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHAEDCLTYMAALRDPPIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATK LSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTTTMADVYGAFFDFASMLESKVDKNDPNATKALSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|241062156|gb|ACS66749.1| squalene synthase [Glycyrrhiza uralensis]
gi|295822123|gb|ADG36715.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822125|gb|ADG36716.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822133|gb|ADG36720.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822137|gb|ADG36722.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822139|gb|ADG36723.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822141|gb|ADG36724.1| squalene synthase 2 [Glycyrrhiza uralensis]
Length = 412
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/380 (86%), Positives = 359/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYE+NS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEDNSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|133917208|emb|CAJ77653.1| squalene synthase 2 [Glycyrrhiza uralensis]
Length = 412
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/380 (86%), Positives = 359/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMA+FICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMARFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYE+NS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEDNSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|223972398|dbj|BAH23428.1| squalene synthetase [Euphorbia tirucalli]
gi|223972400|dbj|BAH23429.1| squalene synthetase [Euphorbia tirucalli]
Length = 411
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/376 (87%), Positives = 356/376 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+LRHPDD YPLLKLKMAS+ AEKQIP +PHW FCYSMLHKVSRSFALVIQQLGT
Sbjct: 1 MGSLGAILRHPDDFYPLLKLKMASKHAEKQIPAQPHWGFCYSMLHKVSRSFALVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH+H+YDREWHFSCGTK+YKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHKHIYDREWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIE+ITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKSYQEAIENITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLFYASG+EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFYASGSEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H++DCLKYMSALRD AIFRFC IPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALIHMDDCLKYMSALRDPAIFRFCGIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS ++K K+++NDPNA KTL+R+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTRTMADVYRAFFDFSCMMKSKVDRNDPNAEKTLNRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA+QK C DSG+LNKR
Sbjct: 361 EAVQKTCKDSGMLNKR 376
>gi|133917969|emb|CAJ77655.1| squalene synthase 2 [Glycyrrhiza eurycarpa]
Length = 412
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/380 (86%), Positives = 358/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYE+NS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEDNSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K+ KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLESKVVKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|253993200|gb|ACT52825.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822121|gb|ADG36714.1| squalene synthase 2 [Glycyrrhiza uralensis]
Length = 412
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/380 (86%), Positives = 358/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYE+NS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEDNSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M VY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMAGVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|295822127|gb|ADG36717.1| squalene synthase 2 [Glycyrrhiza uralensis]
gi|295822129|gb|ADG36718.1| squalene synthase 2 [Glycyrrhiza uralensis]
Length = 412
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/380 (86%), Positives = 358/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVA LVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVARLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYE+NS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEDNSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|224924202|gb|ACN69082.1| squalene synthase [Diospyros kaki]
Length = 415
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/376 (86%), Positives = 358/376 (95%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSLAA+LRHPDD+YPL+KLKMA+R AEKQIPPEPHWAFCY+MLHKVSRSF LVIQQLGT
Sbjct: 1 MGSLAAMLRHPDDVYPLVKLKMAARHAEKQIPPEPHWAFCYTMLHKVSRSFGLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI T+VKVPIL+AFH H+YDR+WHFSCGT+EYKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILLAFHHHIYDRDWHFSCGTREYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLELGKGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYE+NS K+VQCLNDMVTNAL+HV+DCLKYMSALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEKNSVKSVQCLNDMVTNALIHVDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVID+T ++DVY AF+DFS +LK K+ KNDPN+TKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDQTKTISDVYGAFFDFSCMLKSKVEKNDPNSTKTLSRI 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCRESGTLSKR 376
>gi|1449165|dbj|BAA13084.1| squalene synthase [Glycyrrhiza glabra]
Length = 412
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/380 (86%), Positives = 358/380 (94%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK+A+RQAEKQIP EPHW+FCY+MLHKVSRSFA VIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YD +WHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDCDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMA+FICKEVE++DDYDEYC+YVAGLVG+GL
Sbjct: 121 QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAEFICKEVETVDDYDEYCHYVAGLVGMGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMH EDCLKYM+ALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIE+FRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIELFRGVVKMRRGLTAKVIDRTKTMGDVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFKIL 380
EAIQK C +SG+LNKR +L
Sbjct: 361 EAIQKTCRESGLLNKRKSLL 380
>gi|255543839|ref|XP_002512982.1| farnesyl-diphosphate farnesyltransferase, putative [Ricinus
communis]
gi|223547993|gb|EEF49485.1| farnesyl-diphosphate farnesyltransferase, putative [Ricinus
communis]
Length = 412
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/376 (86%), Positives = 353/376 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGS+ A+LRHPDD YPLLKLKMA+R AEKQIPPEP W FCYSMLHKVSRSFALVIQQLGT
Sbjct: 1 MGSVGAILRHPDDFYPLLKLKMAARNAEKQIPPEPRWGFCYSMLHKVSRSFALVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI FH+H+Y+ EWHFSCGTK+YKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILIDFHKHIYNPEWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKSYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASGTEDLAPD+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWP +IWSKYV KL
Sbjct: 181 SKLFHASGTEDLAPDTLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPHQIWSKYVTKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H++DCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALIHMDDCLKYMSALRDPSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+EVFRGVVKMRRGLTAKVIDRT M DVY AFYDFS +LK K+ NDPNA KTLSR+
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFYDFSCMLKSKVEMNDPNAEKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA+QK+C +SG+L++R
Sbjct: 361 EALQKSCRESGLLSRR 376
>gi|110293133|gb|ABG66304.1| squalene synthase [Polygala tenuifolia]
Length = 413
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/376 (85%), Positives = 351/376 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL AVL+HPDD YPLLKLK+A R AEKQIP EPHW F YSMLHKVSRSFALVIQQL T
Sbjct: 1 MGSLGAVLKHPDDFYPLLKLKLAVRHAEKQIPHEPHWGFSYSMLHKVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTS+PTDVKVPIL AFHRH+YDREWHFSCGTKEYKVLMD
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSVPTDVKVPILKAFHRHIYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL KGYQ+AIEDIT+RMG GMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELDKGYQEAIEDITQRMGVGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLA D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASSKEDLASDNLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK+EENSDKAVQCLNDMVTNALMH EDCLKY+SAL+D AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKHEENSDKAVQCLNDMVTNALMHAEDCLKYVSALKDLAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN++VFRGVVKMRRGLTAKVI +TN M DVY AFYDFS +LK K+++NDPNATKTLSR+
Sbjct: 301 YNNVQVFRGVVKMRRGLTAKVIHQTNTMADVYGAFYDFSCMLKSKVDRNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
E+IQ+ C+DS ++NKR
Sbjct: 361 ESIQRTCLDSRLINKR 376
>gi|295822097|gb|ADG36702.1| squalene synthase 1 [Glycyrrhiza uralensis]
gi|295822113|gb|ADG36710.1| squalene synthase 1 [Glycyrrhiza uralensis]
gi|295822117|gb|ADG36712.1| squalene synthase 1 [Glycyrrhiza uralensis]
gi|295822119|gb|ADG36713.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|295822103|gb|ADG36705.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWP++IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPQQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|432139331|gb|AGB05603.1| squalene synthase [Camellia oleifera]
Length = 414
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/376 (85%), Positives = 352/376 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPL+KLKMA+R+AEK IPPEPHW FCYSMLHKVSRSFALVIQQL T
Sbjct: 1 MGSLGAILKHPDDFYPLMKLKMAARRAEKNIPPEPHWGFCYSMLHKVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI T+VKVPIL+AFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILMAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAF ELG+GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFSELGRGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK +ENS KAV+CLNDMVTNAL+HVEDCL YMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKDKENSVKAVECLNDMVTNALIHVEDCLTYMSALRDPSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK K+NK+DPNA K LSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCMLKSKVNKSDPNAMKALSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG LNKR
Sbjct: 361 EAIQKICRESGTLNKR 376
>gi|241062166|gb|ACS66750.1| squalene synthase [Glycyrrhiza uralensis]
Length = 413
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/376 (86%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETADDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|253993202|gb|ACT52826.1| squalene synthase 1 [Glycyrrhiza uralensis]
gi|295822093|gb|ADG36700.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDT I TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTGIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|327243159|gb|AEA41712.1| squalene synthase [Eleutherococcus senticosus]
gi|327243163|gb|AEA41714.1| squalene synthase [Eleutherococcus senticosus]
gi|327243167|gb|AEA41716.1| squalene synthase [Eleutherococcus senticosus]
Length = 415
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/378 (85%), Positives = 351/378 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI T+VKVPILIAFHRH+YD +WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILIAFHRHIYDNDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GY+DAIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYKDAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGLEDLATDSVSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVK+RRGLTAKVIDRTN M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKLRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK+C +SG L + K
Sbjct: 361 EAIQKSCKNSGALTTKRK 378
>gi|295822107|gb|ADG36707.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/376 (86%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDT I TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTGIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|295822101|gb|ADG36704.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITK MGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKGMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|332071088|gb|AED99863.1| squalene synthase [Panax quinquefolius]
Length = 415
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSIPT+VKVPIL+AFHRH+YD++WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVT+AL+H EDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NN +VFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCKESGTLSKR 376
>gi|133917206|emb|CAJ77652.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+ RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIARHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVF GVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFGGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|295822111|gb|ADG36709.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 410
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITK MGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKGMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNK+
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKI 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|225427738|ref|XP_002266150.1| PREDICTED: squalene synthase [Vitis vinifera]
gi|297744746|emb|CBI38008.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/376 (85%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L HPDD+YPLLKLKMA R AEKQIPPEPHWAFCY++LHKVSRSF LVIQQLGT
Sbjct: 1 MGSLGAILTHPDDIYPLLKLKMAVRHAEKQIPPEPHWAFCYTLLHKVSRSFGLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNA+CIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHF+CGTK+YKVLMD
Sbjct: 61 ELRNAICIFYLVLRALDTVEDDTSIRTDVKVPILIAFHRHIYDRDWHFACGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL +GYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELERGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASKLEDLASDELSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK EENS KAVQCLNDMVTNAL+H+EDCL YMSAL+ AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKEEENSIKAVQCLNDMVTNALIHMEDCLTYMSALQSPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK K++KNDPNATK LSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKAMSDVYGAFFDFSCMLKSKVDKNDPNATKALSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA+QK C +SG L KR
Sbjct: 361 EAVQKICRESGALTKR 376
>gi|1449163|dbj|BAA13083.1| squalene synthase [Glycyrrhiza glabra]
Length = 413
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPD++YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDEVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVK PILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKEPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITK MGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKEMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|327243161|gb|AEA41713.1| squalene synthase [Eleutherococcus senticosus]
gi|327243165|gb|AEA41715.1| squalene synthase [Eleutherococcus senticosus]
gi|327243169|gb|AEA41717.1| squalene synthase [Eleutherococcus senticosus]
Length = 415
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/378 (85%), Positives = 350/378 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI T+VKVPILIAFHRH+YD +WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILIAFHRHIYDNDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GY+DAIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYKDAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWS YV+KL
Sbjct: 181 SKLFHASGLEDLATDSVSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSIYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVK+RRGLTAKVIDRTN M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKLRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK+C +SG L + K
Sbjct: 361 EAIQKSCKNSGALTTKRK 378
>gi|353743072|gb|AER23670.1| squalene synthase [Eleutherococcus senticosus]
Length = 414
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/376 (85%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQL
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLDA 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSIPT+VKVPIL+AFHRH+YD++WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG G+Q+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGFQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 ENLKYEENSAKAVQCLNDMVTNALLHAEDCLKYMSNLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCKESGTLSKR 376
>gi|295822099|gb|ADG36703.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/376 (86%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITK MGAGMAKFIC EVE++DDYDE+C+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKGMGAGMAKFICNEVETVDDYDEHCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|75859951|gb|ABA29019.1| squalene synthase [Panax notoginseng]
Length = 415
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSIPT+VKVPIL+AFHRH+YD++WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGNGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAV+CLNDMVTNAL+H EDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVRCLNDMVTNALVHAEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NN +VFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCKESGTLSKR 376
>gi|28208268|dbj|BAC56854.1| squalene synthase [Lotus japonicus]
Length = 413
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/376 (85%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+++HPDDLYPLLKLKMA+R AEKQIP EPHW FCYSMLHKVSRSFALVIQQL T
Sbjct: 1 MGSLGAIVKHPDDLYPLLKLKMAARHAEKQIPSEPHWGFCYSMLHKVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDTSI T+VKVPIL AFHRH+YDR+WHFSCGTKEYKVLM
Sbjct: 61 DLRNAVCIFYLVLRALDTVEDDTSIATEVKVPILKAFHRHIYDRDWHFSCGTKEYKVLMG 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFH VSTAFLEL K YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHLVSTAFLELAKNYQEAIEDITDRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG E+LA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKENLAADSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMH EDCLKYMS LRD +IFRFCAIPQIMAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMSDLRDDSIFRFCAIPQIMAIGTLAIC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+EVFRGVVKMRRGLTAKVIDRT + DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFASMLESKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
AIQK C +SG+LNKR
Sbjct: 361 VAIQKTCRESGLLNKR 376
>gi|55710094|gb|AAV58897.1| squalene synthase [Centella asiatica]
Length = 415
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/378 (85%), Positives = 348/378 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLKMA+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI T+VKVPIL AFHRH+YD WHFSCGTKEYK+LMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILKAFHRHIYDNNWHFSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GY++AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IW+KYVNKL
Sbjct: 181 SKLFHASGAEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRKIWNKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN++VFRGVVKMRRGLTAKVIDRTN M+DVY AFYDFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNLQVFRGVVKMRRGLTAKVIDRTNKMSDVYGAFYDFSCMLKTKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK C +SGV+ K
Sbjct: 361 EAIQKKCKESGVITPNRK 378
>gi|295822091|gb|ADG36699.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/376 (86%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDT I TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTGIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+ +KR
Sbjct: 361 EAIQKTCRESGLPSKR 376
>gi|285013332|gb|ADC32654.1| squalene synthase [Aralia elata]
Length = 414
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/376 (84%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSIPT+VKVPIL+AFHRH+Y+++WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYEKDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHH+S AFLELG GYQ+AIEDIT RMGAGMAKFICKEVE++ DYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHLSNAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETVGDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+ WSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQSWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTNALLHAEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCKESGTLSKR 376
>gi|343466173|gb|AEM42980.1| squalene synthase [Siraitia grosvenorii]
Length = 417
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 346/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+LRHPDD YPLLKLKMA+R AEKQIPPEPHW FCY+MLHKVSRSFALVIQQL
Sbjct: 1 MGSLGAILRHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLAP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNA+CIFYLVLRALDTVEDDTSI TD+KVPIL AFH H+Y+R+WHFSCGTK+YKVLMD
Sbjct: 61 ELRNAICIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGKGYQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLAPDSLSNSMGL LQKTNIIRDYLEDINEIPK RMFWPREIW KY +KL
Sbjct: 181 SKLFHASDLEDLAPDSLSNSMGLLLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED KYEENS KAVQCLND+VTNAL HVEDCLKYMS LRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+EVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N +DPNATKTLSR+
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTQTMADVYGAFFDFSVMLKAKVNSSDPNATKTLSRI 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C SG+LNKR
Sbjct: 361 EAIQKTCEQSGLLNKR 376
>gi|133917210|emb|CAJ77654.1| squalene synthase 1 [Glycyrrhiza eurycarpa]
Length = 413
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/376 (86%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+ RHPDD+YPLLKLKMA+R AEKQIP EPH AFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIARHPDDVYPLLKLKMAARHAEKQIPEEPHRAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVF GVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFGGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|407280556|gb|AFT92039.1| squalene synthase [Euphorbia pekinensis]
Length = 411
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/384 (83%), Positives = 353/384 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLKMA++ AEK IP PHW FCYSMLHKVSRSF+LVIQQLGT
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKMAAKNAEKHIPALPHWGFCYSMLHKVSRSFSLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+A+CIFYLVLRALDTVEDDTSIPTDVKVPILIAFH+HVYDREWHF CGTKEYKV MD
Sbjct: 61 ELRDAICIFYLVLRALDTVEDDTSIPTDVKVPILIAFHKHVYDREWHFPCGTKEYKVPMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQD IEDI KRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLG
Sbjct: 121 QFHHVSTAFLELGKSYQDVIEDIAKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGH 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF ASG EDLAPD+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFDASGFEDLAPDNLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEE+S KAVQCLNDMVTNAL+H++DCLKYMSALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEEDSVKAVQCLNDMVTNALIHMDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKV+DRT M DVY AF+DFS ++K K+++NDPNA KTL+R+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVVDRTRTMADVYRAFFDFSCMMKSKVDRNDPNAEKTLNRL 360
Query: 361 EAIQKACMDSGVLNKRFKILHYSK 384
EA+QK C +SG+LNKR ++ SK
Sbjct: 361 EAVQKTCKESGLLNKRKSYVNGSK 384
>gi|295822095|gb|ADG36701.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 413
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/376 (86%), Positives = 345/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDT I TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTGIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIE ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELEKNYQAAIESITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KND NATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDLNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+ +KR
Sbjct: 361 EAIQKTCRESGLSSKR 376
>gi|295822109|gb|ADG36708.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 410
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/376 (85%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPGEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTA LEL K YQ AIE+ITK MGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTALLELEKNYQAAIENITKGMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNK+
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKI 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT + DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTIADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKTCRESGLLSKR 376
>gi|320445235|gb|ADW27427.1| squalene synthase [Astragalus membranaceus]
Length = 413
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/376 (84%), Positives = 350/376 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++PDD YPLLKLKMA+R AEKQIPPEPHW FCY+MLHKVSRSF LV QQL T
Sbjct: 1 MGSLGAILKNPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVFQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLR LDTVEDDTSI T+VKVPILIAFHRH+YD +WHF CGTKEYKVLM+
Sbjct: 61 ELRNAVCIFYLVLRGLDTVEDDTSIATEVKVPILIAFHRHIYDHDWHFLCGTKEYKVLME 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSAAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETLDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDL PDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLFPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYEENS +AVQCLNDM+TNAL+H EDCLKYMSALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EELKYEENSVEAVQCLNDMITNALIHAEDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIVVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASLLECKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKNCRESGLLSKR 376
>gi|259014869|gb|ACV88718.1| squalene synthase [Panax ginseng]
Length = 415
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/378 (84%), Positives = 349/378 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIP EPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI T+VKVPIL+AFHRH+YD +WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFL+LG GY++AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSGYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIM+IGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMSIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVKMRRGLTAKVIDRTN M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK C +SG L + K
Sbjct: 361 EAIQKICKNSGALTTKRK 378
>gi|319431006|gb|ADV57358.1| squalene synthase [Astragalus membranaceus]
Length = 405
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/376 (84%), Positives = 350/376 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++PDD YPLLKLKMA+R AEKQIPPEPHW FCY+MLHKVSRSF LV QQL T
Sbjct: 1 MGSLGAILKNPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFGLVFQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLR LDTVEDDTSI T+VKVPILIAFHRH+YD +WHF CGTKEYKVLM+
Sbjct: 61 ELRNAVCIFYLVLRGLDTVEDDTSIATEVKVPILIAFHRHIYDHDWHFLCGTKEYKVLME 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLELGK YQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSAAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETLDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDL PDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGSEDLFPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYEENS +AVQCLNDM+TNAL+H EDCLKYMSALRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EELKYEENSVEAVQCLNDMITNALIHAEDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKTLSR+
Sbjct: 301 YNNIVVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASLLECKVDKNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 361 EAIQKNCRESGLLSKR 376
>gi|1552717|gb|AAB08578.1| squalene synthase [Nicotiana tabacum]
Length = 411
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++PDDLYPL+KLK+A+R AEKQIPP PHW FCYSMLHKVSRSFALVIQQL
Sbjct: 1 MGSLRAILKNPDDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYE+NS KAVQCLNDMVTNAL HVEDCL YMSALRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVID+T + DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKVIDQTRTIADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAI K C DSG LNKR
Sbjct: 361 EAILKTCRDSGTLNKR 376
>gi|4426953|gb|AAD20626.1| squalene synthase [Capsicum annuum]
Length = 411
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 345/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSRSFALVIQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+H+YDREWHFSCGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHIYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKNYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYEENS KAVQCLNDMVTNAL HVEDCL YMS LRD AIFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EELKYEENSVKAVQCLNDMVTNALSHVEDCLIYMSNLRDPAIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAK IDRT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKAIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAI K C DSG LNKR
Sbjct: 361 EAILKTCRDSGTLNKR 376
>gi|449464850|ref|XP_004150142.1| PREDICTED: squalene synthase-like [Cucumis sativus]
gi|449520603|ref|XP_004167323.1| PREDICTED: squalene synthase-like [Cucumis sativus]
Length = 417
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/376 (84%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIPPEPHW FCY+MLHKVSRSFALVIQQL
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI TD+KVPIL AFH H+Y+R+WHFSCGTK+YKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLELGKGYQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+A+ EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KY +KL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED KYEENS KAVQCLND+VTNAL HVEDCLKYMS LRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+EVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPNA+KTLSR+
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C SG+LN+R
Sbjct: 361 EAIQKTCKQSGILNRR 376
>gi|404515730|gb|AFR77735.1| squalene synthase, partial [Camellia oleifera]
Length = 413
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/383 (84%), Positives = 351/383 (91%), Gaps = 7/383 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPL+KLKMA+R+AEK IPPEPHW FCYSMLHKVSRSFALVIQQL T
Sbjct: 1 MGSLGAILKHPDDFYPLMKLKMAARRAEKNIPPEPHWGFCYSMLHKVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSI T+VKVPIL+AFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILMAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAF ELG+GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFSELGRGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQ-------KTNIIRDYLEDINEIPKCRMFWPREIW 233
SKLF+ASG+EDLA DSLSNSMGLFLQ KTNIIRDYLEDINEIPK RMFWPR+IW
Sbjct: 181 SKLFHASGSEDLASDSLSNSMGLFLQVFLLTCIKTNIIRDYLEDINEIPKSRMFWPRQIW 240
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKYVNKLEDLK +ENS KAV+CLNDMVTNAL+HVEDCL YMSALRD +IFRFCAIPQIMA
Sbjct: 241 SKYVNKLEDLKDKENSVKAVECLNDMVTNALIHVEDCLTYMSALRDPSIFRFCAIPQIMA 300
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNA 353
IGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT M+DVY F+DFS +LK K+NK+DPNA
Sbjct: 301 IGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTKTMSDVYGGFFDFSCMLKSKVNKSDPNA 360
Query: 354 TKTLSRVEAIQKACMDSGVLNKR 376
K LSR+EAIQK C +SG LNKR
Sbjct: 361 MKALSRLEAIQKICRESGTLNKR 383
>gi|2780361|dbj|BAA24289.1| squalene synthase [Panax ginseng]
gi|41224629|dbj|BAD08242.1| squalene synthase [Panax ginseng]
Length = 415
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/376 (84%), Positives = 348/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HP+D YPLLKLK A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPEDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSIPT+VKVPIL+AFHRH+YD++WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GYQ+AIEDIT RMGAGMAKFICKEVE+I+DYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVT+AL+H EDCLKYMS LR AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NN +VFRGVVKMRRGLTAKVID+T M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCKESGTLSKR 376
>gi|123718158|emb|CAJ58418.1| squalene synthase [Panax quinquefolius]
Length = 415
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/378 (84%), Positives = 349/378 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIP EPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI T+VKVPIL+AFHRH+YD +WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFL+LG GY++AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSGYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQI++IGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIVSIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVKMRRGLTAKVIDRTN M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK C +SG L + K
Sbjct: 361 EAIQKICKNSGALTTKRK 378
>gi|295822105|gb|ADG36706.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 412
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/376 (86%), Positives = 347/376 (92%), Gaps = 1/376 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A++RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIVRHPDDVYPLLKLKMAARHAEKQIPAEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHH STAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHDSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKY ENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKY-ENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 299
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVF GVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 300 YNNIEVFGGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 359
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 360 EAIQKTCRESGLLSKR 375
>gi|5360655|dbj|BAA82093.1| squalene synthase [Solanum tuberosum]
Length = 411
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/376 (85%), Positives = 346/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSRSFALVIQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHF+CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASGTEDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLN+MVTNAL HVEDCL YM LRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNEMVTNALSHVEDCLTYMFNLRDPSIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
+AI K C DSG LNKR
Sbjct: 361 DAILKTCRDSGTLNKR 376
>gi|148613820|gb|ABQ96265.1| squalene synthase [Psammosilene tunicoides]
Length = 414
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/376 (84%), Positives = 352/376 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++PD+ YPLLKLKMA ++AEKQIP E HW FCYSMLHKVSRSFALVIQQLGT
Sbjct: 1 MGSLGAILKYPDEFYPLLKLKMAIKEAEKQIPQEHHWGFCYSMLHKVSRSFALVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYLVLRALDTVEDDTSI T+VKVPIL AFH+H+YDR+WHFSCGTK YKVLMD
Sbjct: 61 ELRNAVCVFYLVLRALDTVEDDTSIATEVKVPILRAFHQHIYDRDWHFSCGTKHYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLEL +GYQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELDRGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ SG ED+A D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYV+KL
Sbjct: 181 SKLFHNSGLEDMATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYE+NS+KAVQCLNDMVTNAL+HVED L YMSALRDHAIFRFCAIPQIMAIGTLALC
Sbjct: 241 EELKYEQNSEKAVQCLNDMVTNALLHVEDSLTYMSALRDHAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVKMRRGLTA VI++TN+M DVY AF+DF+ +LKPK++K DPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAIVIEQTNSMADVYGAFFDFACMLKPKVDKRDPNATKTLSRI 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C DSG LNKR
Sbjct: 361 EAIQKICRDSGTLNKR 376
>gi|386649283|gb|AFJ15526.1| squalene synthase [Azadirachta indica]
Length = 392
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/355 (91%), Positives = 334/355 (94%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
MA R AEKQIPPEPHW FCYSMLHKVSRSF LVIQQLGTDLRNAVCIFYLVLRALDTVED
Sbjct: 1 MAVRHAEKQIPPEPHWGFCYSMLHKVSRSFGLVIQQLGTDLRNAVCIFYLVLRALDTVED 60
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIE 141
DTSIP DVKVPILIAF HVYDR WHFSCGTKEYKVLMDQFH VSTAFLELGKGYQ+AIE
Sbjct: 61 DTSIPADVKVPILIAFRHHVYDRNWHFSCGTKEYKVLMDQFHLVSTAFLELGKGYQEAIE 120
Query: 142 DITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSM 201
DITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASG EDL P +LSNSM
Sbjct: 121 DITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGKEDLVPVTLSNSM 180
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLKYEENS KAVQCLNDMVT
Sbjct: 181 GLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSVKAVQCLNDMVT 240
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
NAL HVEDCLKYMSALRD AIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK
Sbjct: 241 NALNHVEDCLKYMSALRDPAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKA 300
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
IDRTN M DVY AFYDFS +LKPKIN+NDPNATKTLSRVEAIQKACM+SG+LN+R
Sbjct: 301 IDRTNKMADVYGAFYDFSCMLKPKINENDPNATKTLSRVEAIQKACMESGLLNRR 355
>gi|295822115|gb|ADG36711.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 412
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/376 (86%), Positives = 346/376 (92%), Gaps = 1/376 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+ RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIARHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHFSCGTKEYKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHH STAFLEL K YQ AIE+ITKRMGAGMAKFIC EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHDSTAFLELEKNYQAAIENITKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKY ENS KAVQCLNDMVTNAL+H EDCLKYMSALRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKY-ENSVKAVQCLNDMVTNALLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTLALC 299
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVF GVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++KNDPNATKTLSR+
Sbjct: 300 YNNIEVFGGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVDKNDPNATKTLSRL 359
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L+KR
Sbjct: 360 EAIQKTCRESGLLSKR 375
>gi|169742866|gb|ACA66014.1| squalene synthase [Panax ginseng]
Length = 415
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/376 (83%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HP+D YPLLKLK A+R AEKQIPPEPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPEDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSIPT+VKVPIL+AFHRH+YD++WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELG GYQ+AIEDIT RMGAGMAKFICKEVE+I+DYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDPLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVT+AL+H EDCLKYMS LR A+FRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAVFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NN +VFRGVVKMRRGLTAKVID+T M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG L+KR
Sbjct: 361 EAIQKTCKESGTLSKR 376
>gi|370344486|gb|AEX26929.1| squalene synthase 1-1 [Solanum tuberosum]
Length = 411
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/376 (84%), Positives = 345/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSR FALVIQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRGFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHF+CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASGTEDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLN+MVTNAL HVEDCL YM LRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNEMVTNALSHVEDCLTYMFNLRDPSIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
+AI K C DSG LNKR
Sbjct: 361 DAILKTCRDSGTLNKR 376
>gi|224105315|ref|XP_002313765.1| predicted protein [Populus trichocarpa]
gi|222850173|gb|EEE87720.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/376 (83%), Positives = 346/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HP DLYPLLKLKMA++ A KQIP EPHWAFCYSMLH+VSRSFA VIQQLGT
Sbjct: 1 MGSLGAILKHPADLYPLLKLKMAAKHAAKQIPSEPHWAFCYSMLHRVSRSFAFVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH+YDR WHFSCGT +Y+VLMD
Sbjct: 61 ELRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDRNWHFSCGTNDYRVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFH VSTAFLEL KGYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHDVSTAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLA DS+SNSMGLFLQKTNIIRDYLEDINEIP RMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASELEDLASDSISNSMGLFLQKTNIIRDYLEDINEIPMSRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS +AVQCLNDMVTN+L+HV+DCLKYMSALR+ AIFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVEAVQCLNDMVTNSLIHVDDCLKYMSALREPAIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVKMRRGLTA++ RT M DVY AF+DFS +LK K+++NDPNATKTLS +
Sbjct: 301 YNNINVFRGVVKMRRGLTAQIFHRTKTMADVYGAFFDFSCMLKSKVDRNDPNATKTLSSL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA+QK C +SG LNKR
Sbjct: 361 EAVQKTCRESGALNKR 376
>gi|229893914|gb|ACQ90302.1| squalene synthase [Gynostemma pentaphyllum]
Length = 417
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/376 (84%), Positives = 345/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGS A+LRHPDD YPLLKLKMA+R AEKQIP EPHW FCY+MLHKVSRSFALVIQQL
Sbjct: 1 MGSFGAILRHPDDFYPLLKLKMAARNAEKQIPQEPHWGFCYTMLHKVSRSFALVIQQLQP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSI TD+KVPILI FHRH+Y+R+WHFSCGTK YKVLMD
Sbjct: 61 QLRNAVCIFYLVLRALDTVEDDTSIETDIKVPILINFHRHIYNRDWHFSCGTKHYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLEL KGYQ+AI D+T RMGAGMAKFICKEVE+I+DYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELEKGYQEAIGDVTNRMGAGMAKFICKEVETIEDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+EDLA DS+SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGSEDLASDSISNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAV CLNDMVTNAL+HVEDCL YMS L+D +IFRFCAIPQIMAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVHCLNDMVTNALIHVEDCLIYMSNLKDLSIFRFCAIPQIMAIGTLAIC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+ ++DPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVKRSDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C SG+LNKR
Sbjct: 361 EAIQKTCQQSGLLNKR 376
>gi|350535625|ref|NP_001234716.1| squalene synthase [Solanum lycopersicum]
gi|262090328|gb|ACY25092.1| squalene synthase [Solanum lycopersicum]
Length = 411
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/376 (85%), Positives = 344/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSRSFALVIQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHF+CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL HVEDCL YM L D AIFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALSHVEDCLTYMFNLHDPAIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
+AI K C DSG LNKR
Sbjct: 361 DAILKTCRDSGTLNKR 376
>gi|27475614|emb|CAD23250.1| farnesyl-diphosphate farnesyltransferase [Medicago truncatula]
Length = 413
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/376 (83%), Positives = 346/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGS+ A+L++PDD +PLLKLK+A+R AEKQIPPEPHW FCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSIKAILKNPDDFFPLLKLKIAARNAEKQIPPEPHWGFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSI TDVKVPILI FHRH+YD +WHF CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIETDVKVPILIDFHRHIYDNDWHFGCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLELGK YQDAIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSKAFLELGKNYQDAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLFYASG EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFYASGKEDLATDKLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVSKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H +DCL+YMSALRD + FRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHADDCLQYMSALRDSSNFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKT SR+
Sbjct: 301 YNNIGVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASVLESKVDKNDPNATKTSSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|147864614|emb|CAN81937.1| hypothetical protein VITISV_028001 [Vitis vinifera]
Length = 431
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/394 (81%), Positives = 349/394 (88%), Gaps = 18/394 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L HPDD+YPLLKLKMA R AEKQIPPEPHWAFCY++LHKVSRSF LVIQQLGT
Sbjct: 1 MGSLGAILTHPDDIYPLLKLKMAVRHAEKQIPPEPHWAFCYTLLHKVSRSFGLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNA+CIFYLVLRALDTVEDDTSI TDVKVPILIAFHRH+YDR+WHF+CGTK+YKVLMD
Sbjct: 61 ELRNAICIFYLVLRALDTVEDDTSIRTDVKVPILIAFHRHIYDRDWHFACGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL +GYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELERGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASKLEDLASDELSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK EENS KAVQCLNDMVTNAL+H+EDCL YMSAL+ AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKEEENSIKAVQCLNDMVTNALIHMEDCLTYMSALQSPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP---------------- 344
YNNIEVFRGVVKMRRGLTAKVIDRT M+DVY AF+DFS +LK
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKAMSDVYGAFFDFSCMLKSKXRRLFICTIRDALAS 360
Query: 345 --KINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
K++KNDPNATK LSR+EA+QK C +SG L KR
Sbjct: 361 KEKVDKNDPNATKALSRLEAVQKICRESGALTKR 394
>gi|357473511|ref|XP_003607040.1| Squalene synthase [Medicago truncatula]
gi|355508095|gb|AES89237.1| Squalene synthase [Medicago truncatula]
Length = 423
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/376 (83%), Positives = 346/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGS+ A+L++PDD +PLLKLK+A+R AEKQIPPEPHW FCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSIKAILKNPDDFFPLLKLKIAARNAEKQIPPEPHWGFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSI TDVKVPILI FHRH+YD +WHF CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIETDVKVPILIDFHRHIYDNDWHFGCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLELGK YQDAIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSKAFLELGKNYQDAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLFYASG EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFYASGKEDLATDKLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVSKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H +DCL+YMSALRD + FRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHADDCLQYMSALRDSSNFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKT SR+
Sbjct: 301 YNNIGVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASVLESKVDKNDPNATKTSSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|290760240|gb|ADD54645.1| squalene synthase [Bruguiera gymnorhiza]
Length = 416
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/375 (84%), Positives = 346/375 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+ +HPDDLYPLLKLKMA + AEKQIPP+PHW FCY+MLHKVSRSFALVIQQLG
Sbjct: 1 MGSLGAIFKHPDDLYPLLKLKMAMKHAEKQIPPQPHWGFCYTMLHKVSRSFALVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVC+FYLVLRALDTVEDDTSI TDVKVPILIAFH H+YDR+WHFSCGTK+YKVLMD
Sbjct: 61 QLRDAVCVFYLVLRALDTVEDDTSIATDVKVPILIAFHHHLYDRDWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
FHHVSTAF ELGKG+Q+AIE+ITKRMGAGMAKFI KEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 LFHHVSTAFSELGKGHQEAIEEITKRMGAGMAKFISKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE WSKYV+KL
Sbjct: 181 SKLFHASQLEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRETWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTN+L+HV+DCLKYMSAL+D AIFRFCAIPQIMAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNSLIHVDDCLKYMSALQDPAIFRFCAIPQIMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K++K+DPNATKTLSR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKAKVDKSDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNK 375
EAIQK C SG L K
Sbjct: 361 EAIQKTCRASGFLTK 375
>gi|370344514|gb|AEX26930.1| squalene synthase 1-2 [Solanum tuberosum]
Length = 411
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/376 (84%), Positives = 345/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSRSFALVIQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHF+CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASGTEDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLN+MVTNAL HVEDCL YM LRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNEMVTNALSHVEDCLTYMFNLRDPSIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
++NIE FRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 HDNIEAFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
+AI K C DSG LNKR
Sbjct: 361 DAILKTCRDSGTLNKR 376
>gi|323408831|gb|ADX01171.1| putative squalene synthase [Bacopa monnieri]
Length = 414
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/384 (83%), Positives = 348/384 (90%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYP++KLK+A R AEKQIPPEPHW FCY+MLHKVSRSFALVIQQL T
Sbjct: 1 MGSLRAILKHPDDLYPMVKLKLAVRNAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLR+AV IFYLVLRALDTVEDDTSI +VKVPIL AFHRH+YDREWHF+CGTK+YKVLMD
Sbjct: 61 DLRDAVRIFYLVLRALDTVEDDTSISAEVKVPILKAFHRHIYDREWHFACGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLELG GYQ+AIEDIT RMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNALMHVEDC+KYMSAL D AIFRFCAIPQ+MAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALMHVEDCIKYMSALGDPAIFRFCAIPQVMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVKMRRGLTAKVIDRT +M DVY AFYDFS +LK K+ +DPNA KT R+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTKSMADVYGAFYDFSRMLKSKVEDSDPNARKTKDRL 360
Query: 361 EAIQKACMDSGVLNKRFKILHYSK 384
EAI K C +SG LN+R + SK
Sbjct: 361 EAILKICRESGTLNQRKSYIIQSK 384
>gi|224077896|ref|XP_002305455.1| predicted protein [Populus trichocarpa]
gi|222848419|gb|EEE85966.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/376 (84%), Positives = 349/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HP D+YPLLKLKMA++ AEKQIP EPHWAFCYSML +VSRSFALVIQQL T
Sbjct: 1 MGSLGAILKHPVDIYPLLKLKMAAKHAEKQIPREPHWAFCYSMLPRVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYLVLRALDTVEDDTSIPTDVKVPILIAFHRH+YD +WHFSCGTKEYKVLMD
Sbjct: 61 ELRNAVCVFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDHDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFH+VS AFLELGKGYQ+AIEDITKRMGAGMAKFI KEVESIDDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHNVSNAFLELGKGYQEAIEDITKRMGAGMAKFILKEVESIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLAPDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGLEDLAPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H++DCLKY+S LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALIHMDDCLKYLSELRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+ VFRGVVKMRRGLTA+VI +T M DVY AF+DFS +LK K++ +DPNA KTLSR+
Sbjct: 301 YNNVNVFRGVVKMRRGLTAQVIHQTKTMDDVYGAFFDFSCMLKFKVDNSDPNAIKTLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA QK+C +SG LNKR
Sbjct: 361 EAAQKSCRESGALNKR 376
>gi|270303610|gb|ACZ71037.1| squalene synthase [Panax ginseng]
Length = 415
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/378 (83%), Positives = 346/378 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIP EPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI T+VKVPI++AFH H+YD +WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFL+LG Y++AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVKMRRGLTAKVIDRTN M+DVY F+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGTFFDFSCMLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK C +SG L + K
Sbjct: 361 EAIQKICKNSGALTTKRK 378
>gi|1706774|sp|P53800.1|FDFT_NICBE RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|1184109|gb|AAA87048.1| squalene synthetase [Nicotiana benthamiana]
Length = 411
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/376 (84%), Positives = 345/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++P+DLYPL+KLK+A+R AEKQIPP P+W FCYSMLHKVSRSFALVIQQL
Sbjct: 1 MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPNWGFCYSMLHKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+AS EDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASEKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+LKYE+NS KAVQCLNDMVTNAL HVEDCL YMSALRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EELKYEDNSAKAVQCLNDMVTNALPHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVIDRT + DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKVIDRTRTIADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
E I K C DSG LNKR
Sbjct: 361 EVILKTCRDSGTLNKR 376
>gi|321265874|gb|ADW78251.1| squalene synthase [Withania somnifera]
gi|380751381|gb|ADO22708.1| squalene synthase [Withania somnifera]
Length = 413
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/378 (84%), Positives = 345/378 (91%), Gaps = 2/378 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHWAFCY ML KVSRSFAL IQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWAFCYLMLQKVSRSFALAIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC--GTKEYKVL 118
+LR+AVCIFYLVLRALDTVEDDTSIP DVKVPILI+FH+HVYDREWHFS GTKEYKVL
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPADVKVPILISFHQHVYDREWHFSLLGGTKEYKVL 120
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 178
MDQFHHVSTAFLELGK YQ AI+DIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGL
Sbjct: 121 MDQFHHVSTAFLELGKHYQQAIQDITLRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGL 180
Query: 179 GLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
GLSKLF+ASG EDLAPDSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVN
Sbjct: 181 GLSKLFHASGKEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVN 240
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLEDLKYEENS KAVQCLNDMVTNAL HVEDCL YMS LRD AIFRFC IPQ+MAIGTLA
Sbjct: 241 KLEDLKYEENSVKAVQCLNDMVTNALSHVEDCLTYMSNLRDPAIFRFCGIPQVMAIGTLA 300
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
+CY+NIEVFRGVVKMRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPN+TKTL
Sbjct: 301 MCYDNIEVFRGVVKMRRGLTAKVIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNSTKTLK 360
Query: 359 RVEAIQKACMDSGVLNKR 376
++EAI K C +SG+LNKR
Sbjct: 361 KLEAILKTCRNSGMLNKR 378
>gi|370344569|gb|AEX26932.1| squalene synthase [Solanum chacoense]
Length = 411
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/376 (84%), Positives = 343/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L++PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSRSFALVIQQL
Sbjct: 1 MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHF+CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLE GK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLEHGKLYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASGTEDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKY ENS KAVQCLN+MVTNAL HVEDCL YM LRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYVENSVKAVQCLNEMVTNALSHVEDCLTYMFNLRDPSIFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVI RT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKVIGRTKTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
+AI K C DSG LNKR
Sbjct: 361 DAILKTCRDSGTLNKR 376
>gi|159895663|gb|ABX10442.1| squalene synthase 2 [Gossypium hirsutum]
Length = 412
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/376 (84%), Positives = 347/376 (92%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+++HP D YPLLKLKMASR AE+QIP EPHWAFC+SMLHKVSRSFALVIQQL T
Sbjct: 1 MGSLGALVKHPGDFYPLLKLKMASRHAERQIPSEPHWAFCFSMLHKVSRSFALVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+L+NAVCIFYLVLRALDTVEDDTS+ TD+KVPIL F+RH+YDR+WHFSCGTK YKVLMD
Sbjct: 61 ELKNAVCIFYLVLRALDTVEDDTSVATDIKVPILEEFYRHIYDRDWHFSCGTKNYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLEL KGYQ+AIEDITKRMGAGMAKFICKEVE++ DYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETVGDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LF+A GTEDLAPD+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IW KYVNKL
Sbjct: 181 SQLFHACGTEDLAPDTLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWGKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HV+DCLKYMSAL D AIFRFCAIPQ+MAIGTLALC
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALIHVDDCLKYMSALPDPAIFRFCAIPQVMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVKMRRGLTAKVIDRTN M DVY AFYDFS +LK K++KNDP A KT SR+
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNTMADVYGAFYDFSCMLKAKVDKNDPCAQKTSSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
++I K C DSGVLN+R
Sbjct: 361 DSILKTCRDSGVLNER 376
>gi|123718160|emb|CAJ58419.1| squalene synthase [Panax quinquefolius]
Length = 415
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/378 (83%), Positives = 345/378 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDD YPLLKLK+A+R AEKQIP EPHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRA DTVEDDTSI T+VKVPI++AFH H+YD +WHFSCGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRAFDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFL+LG GY++AIEDIT RMGAGMAKF+CKEVE+IDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSGYKEAIEDITMRMGAGMAKFLCKEVETIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG ED A DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWP +IWSKYV+KL
Sbjct: 181 SKLFHASGAEDFATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPCQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVKMRRGLTAKVIDRTN M+DVY AF+DFS +LK K++ NDPNATKTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQK C +SG L + K
Sbjct: 361 EAIQKICKNSGALTTKRK 378
>gi|388497714|gb|AFK36923.1| unknown [Medicago truncatula]
Length = 413
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/376 (82%), Positives = 344/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGS+ A+L++PDD +PLLKLK+A+R AEKQIPPEPHW FCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSIKAILKNPDDFFPLLKLKIAARNAEKQIPPEPHWGFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSI TDVKVPILI FHRH+YD + HF CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIETDVKVPILIDFHRHIYDNDRHFGCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLELGK YQDAIED+TKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSKAFLELGKNYQDAIEDLTKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLFYASG EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFYASGKEDLATDKLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVSKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H DCL+YMSALRD + FRFCAIPQ+MAIGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALLHAGDCLQYMSALRDSSNFRFCAIPQVMAIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVKMRRGLTAKVIDRT M DVY AF+DF+++L+ K++KNDPNATKT SR+
Sbjct: 301 YNNIGVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASVLESKVDKNDPNATKTSSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQK C +SG+L KR
Sbjct: 361 EAIQKTCRESGLLTKR 376
>gi|38426488|gb|AAR20329.1| squalene synthase [Artemisia annua]
Length = 418
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/376 (82%), Positives = 344/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
M SL AVL+HPDD YPLLKLKMA+++AEKQIP +PHWAF YSMLHKVSRSFALVIQQL
Sbjct: 1 MSSLKAVLKHPDDFYPLLKLKMAAKKAEKQIPSQPHWAFSYSMLHKVSRSFALVIQQLNP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI D+KVPILIAFH+H+Y+R+WHF+CGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIAADIKVPILIAFHKHIYNRDWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL +GYQ+AIEDIT RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG+GL
Sbjct: 121 QFHHVSTAFLELKRGYQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF++SGTE L DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKL
Sbjct: 181 SKLFHSSGTEILFSDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS+KAVQCLNDMVTNAL+H+EDCLKYMS L+D AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSEKAVQCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVK+RRGLTAKVIDRT M DVY AF DFS++LK K++ +DPNA T++R+
Sbjct: 301 YNNIEVFRGVVKLRRGLTAKVIDRTKTMADVYQAFSDFSDMLKSKVDMHDPNAQTTITRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA QK C DSG L+ R
Sbjct: 361 EAAQKICKDSGTLSNR 376
>gi|260506054|gb|ACX42423.1| squalene synthase [Bupleurum chinense]
Length = 414
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/376 (82%), Positives = 343/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK A + AEKQIPP+PHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKYAVKHAEKQIPPQPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI ++VKVPIL+ FHRH+Y+ WHFSCGTKEYK+LMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILMEFHRHIYNSSWHFSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELGKGYQ+AIEDIT RMGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD A FRFCAIPQIMAIGTL+LC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSDLRDPANFRFCAIPQIMAIGTLSLC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAK+IDRT M+DVY AF+DFS +LK K++ +DP+A TLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKIIDRTKTMSDVYGAFFDFSCLLKAKVDHDDPSAKITLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQ+ C +SG L KR
Sbjct: 361 EAIQQTCKNSGTLTKR 376
>gi|260506058|gb|ACX42425.1| squalene synthase [Bupleurum chinense]
Length = 414
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/376 (82%), Positives = 343/376 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK A + AEKQIPP+PHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKYAVKHAEKQIPPQPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI ++VKVPIL+ FHRH+Y+ WHFSCGTKEYK+LMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILMEFHRHIYNNSWHFSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELGKGYQ+AIEDIT RMGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD A FRFCAIPQIMAIGTL+LC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSDLRDPANFRFCAIPQIMAIGTLSLC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAK+IDRT M+DVY AF+DFS +LK K++ +DP+A TLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKIIDRTKTMSDVYGAFFDFSCLLKAKVDHDDPSAKITLSRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAIQ+ C +SG L KR
Sbjct: 361 EAIQQTCKNSGTLTKR 376
>gi|38426486|gb|AAR20328.1| squalene synthase [Artemisia annua]
Length = 413
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/375 (82%), Positives = 343/375 (91%)
Query: 2 GSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD 61
SL AVL+HPDD YPLLKLKMA+++AEKQIP +PHWAF YSMLHKVSRSFALVIQQL
Sbjct: 1 SSLKAVLKHPDDFYPLLKLKMAAKKAEKQIPSQPHWAFSYSMLHKVSRSFALVIQQLNPQ 60
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
LR+AVCIFYLVLRALDTVEDDTSI D+KVPILIAFH+H+Y+R+WHF+CGTKEYKVLMDQ
Sbjct: 61 LRDAVCIFYLVLRALDTVEDDTSIAADIKVPILIAFHKHIYNRDWHFACGTKEYKVLMDQ 120
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
FHHVSTAFLEL +GYQ+AIEDIT RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG+GLS
Sbjct: 121 FHHVSTAFLELKRGYQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLS 180
Query: 182 KLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE 241
KLF++SGTE L DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE
Sbjct: 181 KLFHSSGTEILFSDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLE 240
Query: 242 DLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCY 301
DLKYEENS+KAVQCLNDMVTNAL+H+EDCLKYMS L+D AIFRFCAIPQIMAIGTLALCY
Sbjct: 241 DLKYEENSEKAVQCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQIMAIGTLALCY 300
Query: 302 NNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVE 361
NNIEVFRGVVK+RRGLTAKVIDRT M DVY AF DFS++LK K++ +DPNA T++R+E
Sbjct: 301 NNIEVFRGVVKLRRGLTAKVIDRTKTMADVYQAFSDFSDMLKSKVDMHDPNAQTTITRLE 360
Query: 362 AIQKACMDSGVLNKR 376
A QK C DSG L+ R
Sbjct: 361 AAQKICKDSGTLSNR 375
>gi|238818585|gb|ACR57219.1| squalene synthase [Salvia miltiorrhiza]
Length = 413
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/376 (83%), Positives = 341/376 (90%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+LRHPDDLYPLLKLK A+R AEKQIPPEPHW FCY+MLHKVSRSF LVIQQL T
Sbjct: 1 MGSLRAILRHPDDLYPLLKLKYAARNAEKQIPPEPHWGFCYTMLHKVSRSFGLVIQQLDT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLR+A+CIFYLVLRALDTVEDDTSI T++KVPIL+AFHRH++DREWHFSCGTKEY+VLMD
Sbjct: 61 DLRDAICIFYLVLRALDTVEDDTSIATELKVPILMAFHRHIFDREWHFSCGTKEYRVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL GYQDAIEDIT RMGAGMAKFICKEVE+ +DYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELAPGYQDAIEDITMRMGAGMAKFICKEVETTNDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA D++SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKL
Sbjct: 181 SKLFHASGKEDLATDAMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK +ENS KAVQCLNDMVTNAL+HVEDCLKYMS LRD AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKSQENSVKAVQCLNDMVTNALVHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAK+IDRT M DVY AFYDFS +LK K++ DPNA T R+
Sbjct: 301 YDNIEVFRGVVKMRRGLTAKIIDRTKTMFDVYGAFYDFSRMLKFKVDDKDPNAGTTKDRL 360
Query: 361 EAIQKACMDSGVLNKR 376
++I K C DSG LN R
Sbjct: 361 DSILKICRDSGTLNDR 376
>gi|260506059|gb|ACX42426.1| squalene synthase [Bupleurum chinense]
Length = 415
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/375 (82%), Positives = 342/375 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L+HPDDLYPLLKLK A + AEKQIPP+PHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAILKHPDDLYPLLKLKYAVKHAEKQIPPQPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI ++VKVPIL+ FHRH+Y+ WHFSCGTKEYK+LMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILMEFHRHIYNNSWHFSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELGKGYQ+AIEDIT RMGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD A FRFCAIPQIMAIGTL+LC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSDLRDPANFRFCAIPQIMAIGTLSLC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAK+IDRT M+DVY AF+DFS +LK K++ +DP+A TLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKIIDRTKTMSDVYGAFFDFSCLLKAKVDHDDPSAKITLSRL 360
Query: 361 EAIQKACMDSGVLNK 375
EAIQ+ C +SG L K
Sbjct: 361 EAIQQTCKNSGTLTK 375
>gi|66393825|gb|AAY46017.1| squalene synthase [Bupleurum falcatum]
Length = 415
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/378 (82%), Positives = 341/378 (90%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A L+HPDDLYPLLKLK A + AEKQIPP+PHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAFLKHPDDLYPLLKLKYAVKHAEKQIPPQPHWAFCYSMLHKVSRSFGLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI ++VKVPIL+ FHRH+Y+ WHFSCGTKEYK+LMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILMEFHRHIYNNSWHFSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
FHHVS AFLELGKGYQ+AIEDIT RMGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGL
Sbjct: 121 GFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IWSKYV+KL
Sbjct: 181 SKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD A FRFCAIPQIMAIGTL+LC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSDLRDPANFRFCAIPQIMAIGTLSLC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAK+IDRT M+DVY AF+DFS +LK K++ +DP+A TLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKIIDRTKTMSDVYGAFFDFSCLLKAKVDHDDPSAKITLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQ+ C +SG L K K
Sbjct: 361 EAIQQTCKNSGTLTKSRK 378
>gi|15236168|ref|NP_195190.1| Squalene synthase [Arabidopsis thaliana]
gi|1706772|sp|P53799.1|FDFT_ARATH RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|798820|emb|CAA60385.1| farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana]
gi|806325|dbj|BAA06103.1| squalene synthase [Arabidopsis thaliana]
gi|2232212|gb|AAB62242.1| squalene synthase 1 [Arabidopsis thaliana]
gi|3096933|emb|CAA18843.1| farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana]
gi|4098519|gb|AAD00296.1| squalene synthase [Arabidopsis thaliana]
gi|7270414|emb|CAB80181.1| farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana]
gi|20466804|gb|AAM20719.1| putative squalene synthase [Arabidopsis thaliana]
gi|28059678|gb|AAO30082.1| putative squalene synthase [Arabidopsis thaliana]
gi|332661003|gb|AEE86403.1| Squalene synthase [Arabidopsis thaliana]
Length = 410
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/378 (80%), Positives = 346/378 (91%), Gaps = 2/378 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL +LR+PDD+YPLLK+K A +AEKQIPPEPHW FCYSMLHKVSRSF+LVIQQL T
Sbjct: 1 MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYLVLRALDTVEDDTSIPTD KVPILIAFHRH+YD +WH+SCGTKEYK+LMD
Sbjct: 61 ELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLEL KGYQ+AIE+IT+RMGAGMAKFIC+EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
SKLF A+G+E L PD ++SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KY +
Sbjct: 181 SKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLEDLKYEEN++K+VQCLN+MVTNALMH+EDCLKYM +LRD +IFRFCAIPQIMAIGTLA
Sbjct: 241 KLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGTLA 300
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
LCYNN +VFRGVVK+RRGLTAKVIDRT M DVY AFYDFS +LK K++KNDPNA+KTL+
Sbjct: 301 LCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKTLN 360
Query: 359 RVEAIQKACMDSGVLNKR 376
R+EA+QK C D+GVL R
Sbjct: 361 RLEAVQKLCRDAGVLQNR 378
>gi|297802498|ref|XP_002869133.1| hypothetical protein ARALYDRAFT_912921 [Arabidopsis lyrata subsp.
lyrata]
gi|297314969|gb|EFH45392.1| hypothetical protein ARALYDRAFT_912921 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/378 (80%), Positives = 346/378 (91%), Gaps = 2/378 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL +LR+PDD+YPLLK+K A +AEKQIPPEPHW FCYSMLHKVSRSF+LVIQQL T
Sbjct: 1 MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYLVLRALDTVEDDTSIPTD KVPILIAFHRH+Y+ +WH+SCGT EYKVLMD
Sbjct: 61 ELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYNTDWHYSCGTNEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLEL KGYQ+AIE+IT+RMGAGMAKFIC+EVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
SKLF A+G+E L PD ++SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KY +
Sbjct: 181 SKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLEDLKYEENS K+VQCLN+MVTNAL+H+EDCLKYM+ALRD +IFRFCAIPQIMAIGTLA
Sbjct: 241 KLEDLKYEENSTKSVQCLNEMVTNALIHIEDCLKYMAALRDPSIFRFCAIPQIMAIGTLA 300
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
LCYNN++VFRGVVK+RRGLTAKVIDRT M DVY AFYDFS +LK K++ NDPNA+KTL+
Sbjct: 301 LCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDNNDPNASKTLN 360
Query: 359 RVEAIQKACMDSGVLNKR 376
R+EA+QK C D+GVL+ R
Sbjct: 361 RLEAVQKLCKDTGVLHNR 378
>gi|15080761|gb|AAG14896.2|AF302464_1 squalene synthase [Artemisia annua]
gi|15217159|gb|AAK92539.1|AF405310_1 squalene synthase [Artemisia annua]
Length = 418
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/376 (80%), Positives = 341/376 (90%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
M SL AVL+HPDD YPLLKLKMA+++AEKQIP +PHWAF YSMLHKVSRSFALVIQQL
Sbjct: 1 MSSLKAVLKHPDDFYPLLKLKMAAKKAEKQIPSQPHWAFSYSMLHKVSRSFALVIQQLNP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI D+KVPILIAFH+H+Y+R+WHF+CGTKEYKVLMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSIAADIKVPILIAFHKHIYNRDWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL +GYQ+AI DIT RM AGMAKFICKEVE++DDYDE+C+YVAGLVG+GL
Sbjct: 121 QFHHVSTAFLELKRGYQEAIGDITMRMSAGMAKFICKEVETVDDYDEFCHYVAGLVGIGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF++SGTE L DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREI SKYVNKL
Sbjct: 181 SKLFHSSGTEILFSDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIRSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEE+S+KAVQCLNDMVTNAL+H+EDCLKYMS L+D AIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEEDSEKAVQCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVK+RRGLTAKVIDRT M DVY AF DFS++LK K++ +DPNA T++R+
Sbjct: 301 YNNIEVFRGVVKLRRGLTAKVIDRTKTMADVYQAFSDFSDMLKSKVDMHDPNAQTTITRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EA QK C DSG L+ R
Sbjct: 361 EAAQKICKDSGTLSNR 376
>gi|414073181|gb|AFI33135.2| squalene synthase, partial [Eriobotrya japonica]
Length = 387
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/350 (87%), Positives = 331/350 (94%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
AEKQIP EPHWAFCY+ML KVSRSFALVIQQLGT+LRNAVCIFYLVLRALDTVEDDTSI
Sbjct: 2 AEKQIPAEPHWAFCYTMLQKVSRSFALVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIA 61
Query: 87 TDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
TDVKVPIL+AFHRH+YD EWHF+CGT YKVLMD+FHHVSTAFLELGKGYQ+AIEDITKR
Sbjct: 62 TDVKVPILLAFHRHIYDPEWHFACGTNNYKVLMDEFHHVSTAFLELGKGYQEAIEDITKR 121
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
MGAGMAKFI KEVE+IDDYDEYC+YVAGLVGLGLSKLF+A+G EDLA DSLSNSMGLFLQ
Sbjct: 122 MGAGMAKFIMKEVETIDDYDEYCHYVAGLVGLGLSKLFHAAGKEDLASDSLSNSMGLFLQ 181
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMH 266
KTNIIRDYLEDINEIPK RMFWPR+IWSKYVNKLEDLKYEENS+KAVQCLNDMVTNAL+H
Sbjct: 182 KTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALIH 241
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTN 326
+EDCLKYM+ALRD AIF+FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTA+VIDRT
Sbjct: 242 MEDCLKYMAALRDPAIFKFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAEVIDRTK 301
Query: 327 NMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
+M DVY AF+DFS+IL K++KNDPNATK+LSRVEA+QK C DSG L+KR
Sbjct: 302 SMDDVYGAFFDFSSILNSKVDKNDPNATKSLSRVEAVQKLCRDSGALSKR 351
>gi|289467501|gb|ADC95435.1| squalene synthase [Withania somnifera]
Length = 411
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/376 (82%), Positives = 333/376 (88%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG++ A+L++PDDLYPL+KLK+A+R AEKQIPPEPHWAFCY ML KVSRSFALVIQQL
Sbjct: 1 MGTVRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWAFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIP DVKVPILI+FH+HVYDREWHFSCGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPADVKVPILISFHQHVYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLELGK YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAG VGLGL
Sbjct: 121 QFHHVSTAFLELGKHYQQAIEDITLRMGAGMAKFICKEVETTDDYDEYCHYVAGYVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S LF+ASG EDLAPDSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SILFHASGKEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL HVEDCL YM LRD AI R IPQ+M IGTLA+C
Sbjct: 241 EDLKYEENSVKAVQCLNDMVTNALSHVEDCLTYMPNLRDPAICRLRGIPQVMVIGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y NIEVF MRRGLTAKVIDRT M DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 301 YYNIEVFSRSGSMRRGLTAKVIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
EAI K C +SG LNKR
Sbjct: 361 EAILKTCRNSGTLNKR 376
>gi|260506056|gb|ACX42424.1| squalene synthase [Bupleurum chinense]
Length = 415
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/378 (79%), Positives = 339/378 (89%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A L+HPDDLYPLLKLK A + AEKQIPP+PHWAFCYSMLHKVSRSF LVIQQLG
Sbjct: 1 MGSLGAFLKHPDDLYPLLKLKYAVKLAEKQIPPQPHWAFCYSMLHKVSRSFCLVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVCIFYLVLRALDTVEDDTSI ++VKVPIL+ FHRH+Y+ WHFSCGTKEYK+LMD
Sbjct: 61 QLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILMEFHRHIYNNSWHFSCGTKEYKILMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVS AFLELGKGYQ+AIEDIT RMGAGMAKFIC+EVESIDDYDEYC++VAGLVGLG+
Sbjct: 121 EFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFICQEVESIDDYDEYCHHVAGLVGLGM 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+A G EDLA D+LSNSMG+FLQKTNIIRDYLEDINEIPK R+FWPR+IWSKYV+KL
Sbjct: 181 SKLFHALGAEDLATDALSNSMGIFLQKTNIIRDYLEDINEIPKSRIFWPRQIWSKYVDKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS KAVQCLNDMVTNAL+H EDCLKYMS LRD FRFCAI QIMAIGTL+LC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSDLRDPGNFRFCAISQIMAIGTLSLC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNI+VFRGVVKMRRGLTAK+IDRT M+DVY AF+DFS +LK K++ +DP+A TLSR+
Sbjct: 301 FNNIQVFRGVVKMRRGLTAKIIDRTKTMSDVYDAFFDFSCLLKAKVDHDDPSAKITLSRL 360
Query: 361 EAIQKACMDSGVLNKRFK 378
EAIQ+ C +SG L K K
Sbjct: 361 EAIQQTCKNSGTLTKSRK 378
>gi|395406304|gb|AFN61199.1| squalene synthase [Chlorophytum borivilianum]
Length = 410
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/384 (79%), Positives = 350/384 (91%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+ A+L+HPDD YP++KL MA + A KQIPP+PHWAFCY+MLHKVSRSFALVIQQL
Sbjct: 1 MGTFGAILKHPDDFYPIMKLAMAMKSAAKQIPPQPHWAFCYTMLHKVSRSFALVIQQLDV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYLVLRALDTVEDDTSIPTDVKVPIL +FHRH+YD EWHFSCGTK+YKVLMD
Sbjct: 61 NLRDAVCVFYLVLRALDTVEDDTSIPTDVKVPILNSFHRHIYDCEWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVSTAFLELGKGYQ+AIEDIT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDL+ DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+IW+KY +KL
Sbjct: 181 SKLFHASGKEDLSSDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWNKYADKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED KYEENS+KAVQCLNDMVTNAL H EDCL+YMSAL+D AIFRFCAIPQ+MAIGTLALC
Sbjct: 241 EDFKYEENSEKAVQCLNDMVTNALDHAEDCLQYMSALKDIAIFRFCAIPQVMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN++VFRGVVKMRRGLTAKVID+T M+DVY AF++FS+++K K+N DPNA TL R+
Sbjct: 301 YNNVKVFRGVVKMRRGLTAKVIDQTRTMSDVYGAFFEFSSLMKTKVNDLDPNAALTLKRI 360
Query: 361 EAIQKACMDSGVLNKRFKILHYSK 384
EAIQK+C+ SG L+KR L+ S+
Sbjct: 361 EAIQKSCISSGNLDKRGCSLYKSQ 384
>gi|62945917|gb|AAY22201.1| squalene synthase [Datura inoxia]
Length = 387
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/353 (86%), Positives = 323/353 (91%)
Query: 24 SRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDT 83
+R AEKQIPPEPHW FCY MLHKVSRSFALVIQQL +LR+AVCIFYLVLRALDTVEDDT
Sbjct: 1 ARHAEKQIPPEPHWGFCYLMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDT 60
Query: 84 SIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI 143
SIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK YQ AIEDI
Sbjct: 61 SIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKHYQQAIEDI 120
Query: 144 TKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGL 203
T RMGAGMAKFICKEVE+ +DYDEYC+YVAGLVGLGLSKLF+ASG EDLA DSLSNSMGL
Sbjct: 121 TMRMGAGMAKFICKEVETTNDYDEYCHYVAGLVGLGLSKLFHASGKEDLASDSLSNSMGL 180
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
FLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKLE+LKYEENS KAVQCLNDMVTNA
Sbjct: 181 FLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKLEELKYEENSVKAVQCLNDMVTNA 240
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVID 323
L HVEDCL YMS LRD AIFRFCAIPQ+MAIGTLA+CY+NIEVFRGVVKMRRGLTAKVID
Sbjct: 241 LSHVEDCLTYMSNLRDPAIFRFCAIPQVMAIGTLAMCYDNIEVFRGVVKMRRGLTAKVID 300
Query: 324 RTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
RT M DVY AF+DFS +LK K+N N PNATKTL +EA+ K C DSG LNKR
Sbjct: 301 RTRTMEDVYGAFFDFSCMLKSKVNNNGPNATKTLKGLEAVLKTCRDSGTLNKR 353
>gi|427542512|gb|AFY63035.1| squalene synthase [Alisma orientale]
Length = 409
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 293/376 (77%), Positives = 336/376 (89%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG + A+L HP+DL LLKLK+A R+ EKQIPPEPHW F Y+ML +VSRSFA+VIQQLG
Sbjct: 1 MGVVGAILEHPEDLVALLKLKVAVRKIEKQIPPEPHWGFSYTMLQRVSRSFAIVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLR LDT+EDDTSIPTD K+PIL +FH+H+YD +WHFSCG K+YKVLMD
Sbjct: 61 ELRNAVCIFYLVLRGLDTIEDDTSIPTDTKLPILNSFHQHIYDPDWHFSCGVKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
FH+VS AFLEL K Y+DAIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGL
Sbjct: 121 NFHYVSNAFLELDKSYKDAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG+E LA DSLSNSMGLFLQKTNIIRDYLEDINE+PK RMFWPREIWSKY +KL
Sbjct: 181 SKLFHASGSEKLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKSRMFWPREIWSKYADKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEE+SDKAV+CLNDMVT+AL H EDCL+YMS L+D +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEESSDKAVECLNDMVTDALRHAEDCLQYMSDLQDISIFRFCAIPQIMAIGTLALC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
+NNIEVF+GVVKMRRGL AK+ID+T MTDVY AFY FS++LK KIN DPNA+ TL R+
Sbjct: 301 FNNIEVFQGVVKMRRGLAAKIIDQTKTMTDVYNAFYGFSHLLKSKINYKDPNASLTLKRL 360
Query: 361 EAIQKACMDSGVLNKR 376
+ IQK C+DSG+L+KR
Sbjct: 361 DVIQKVCLDSGLLDKR 376
>gi|297802496|ref|XP_002869132.1| squalene synthase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297314968|gb|EFH45391.1| squalene synthase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 291/378 (76%), Positives = 334/378 (88%), Gaps = 2/378 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL+ +LRHPD+LYPLLKLK+A +A+KQIP EPH AFCYSMLHKVS+SF+LVIQQLGT
Sbjct: 1 MGSLSTILRHPDELYPLLKLKLAITKAQKQIPLEPHLAFCYSMLHKVSKSFSLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYL+LRALDTVEDDTSIP + KVPILIAFHRH+YD WHFSCGTK+YKVLMD
Sbjct: 61 ELRNAVCVFYLILRALDTVEDDTSIPMETKVPILIAFHRHLYDGGWHFSCGTKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFLEL KGYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+Y AGLVGLGL
Sbjct: 121 QFHHVSAAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
SK+F AS E L PD +SNS GLFLQKTNII+DYLEDINEIPK RMFWPREIW KYV+
Sbjct: 181 SKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDYLEDINEIPKSRMFWPREIWGKYVD 240
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLEDLK EE S +AVQCLN+MVTNAL HVEDCLK +++LRD AIF+ CAIPQI+AIGTL
Sbjct: 241 KLEDLKNEEKSTQAVQCLNEMVTNALTHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLT 300
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
LCYNN++VFRG V++RRGL AKVID T M DVY AFYDFS +L+ K++KNDPNA KTL+
Sbjct: 301 LCYNNVQVFRGAVRLRRGLIAKVIDLTKTMDDVYGAFYDFSCMLQTKVDKNDPNAMKTLN 360
Query: 359 RVEAIQKACMDSGVLNKR 376
R+E I+K C ++GV++KR
Sbjct: 361 RLETIKKVCKENGVIHKR 378
>gi|2228795|gb|AAB61927.1| squalene synthase 2 [Arabidopsis thaliana]
Length = 413
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 289/378 (76%), Positives = 335/378 (88%), Gaps = 2/378 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL+ +LRHPD+LYPLLKLK+A +A+KQIP EPH AFCYS+LHKVS+SF+LVIQQLGT
Sbjct: 1 MGSLSTILRHPDELYPLLKLKLAITKAQKQIPLEPHLAFCYSILHKVSKSFSLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYL+LRALDTVEDDTS+P ++KVPILIAFHRH+YD +WHFSCGTKEYK+LMD
Sbjct: 61 ELRNAVCVFYLILRALDTVEDDTSVPVEIKVPILIAFHRHIYDGDWHFSCGTKEYKLLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFL+L KGYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+Y AGLVGLGL
Sbjct: 121 QFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
SK+F AS E L PD +SNS GLFLQKTNII+DYLEDINE PK RMFWPREIW KYV+
Sbjct: 181 SKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDYLEDINERPKSRMFWPREIWGKYVD 240
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLED K EE + KAVQCLN+MVTNAL HVEDCLK +++LRD AIF+ CAIPQI+AIGTL
Sbjct: 241 KLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLT 300
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
LCYNN++VFRGVV+MRRGL AKVIDRT M DVY AFYDFS +L+ K++ NDPNA KTL+
Sbjct: 301 LCYNNVQVFRGVVRMRRGLIAKVIDRTKTMDDVYGAFYDFSCMLQTKVDNNDPNAMKTLN 360
Query: 359 RVEAIQKACMDSGVLNKR 376
R+E I+K C ++GVL+KR
Sbjct: 361 RLETIKKVCRENGVLHKR 378
>gi|115456049|ref|NP_001051625.1| Os03g0805100 [Oryza sativa Japonica Group]
gi|2463565|dbj|BAA22557.1| squalene synthase [Oryza sativa Japonica Group]
gi|41469400|gb|AAS07223.1| squalene synthase [Oryza sativa Japonica Group]
gi|108711634|gb|ABF99429.1| Squalene synthetase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550096|dbj|BAF13539.1| Os03g0805100 [Oryza sativa Japonica Group]
gi|215769077|dbj|BAH01306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 403
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/379 (75%), Positives = 334/379 (88%)
Query: 6 AVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
VL P+++ PL+KL++A+ + ++QIPPE HWAF Y+ML +VSRSFALVIQQLG DLRNA
Sbjct: 2 GVLSRPEEVLPLVKLRVAAGRIKRQIPPEEHWAFAYTMLQRVSRSFALVIQQLGPDLRNA 61
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDTVEDDTSIP VKVPIL FHRH+Y+R+WH+SCGTK+YK+LMD+F V
Sbjct: 62 VCIFYLVLRALDTVEDDTSIPAAVKVPILKEFHRHIYNRDWHYSCGTKDYKLLMDKFRLV 121
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
STAFLELG+GYQ+AIE+IT+ MGAGMAKFICKEVE++DDY+EYC+YVAGLVG GLS+LF+
Sbjct: 122 STAFLELGQGYQEAIEEITRLMGAGMAKFICKEVETVDDYNEYCHYVAGLVGYGLSRLFH 181
Query: 186 ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY 245
A GTEDLA DSLSNSMGLFLQK NIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLKY
Sbjct: 182 AGGTEDLASDSLSNSMGLFLQKINIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKY 241
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
EENS+KAVQCLNDMVTNAL H EDCL+YMSAL+DHAIFRFCAIPQIMAIGT A+CYNN+
Sbjct: 242 EENSEKAVQCLNDMVTNALSHAEDCLQYMSALKDHAIFRFCAIPQIMAIGTCAICYNNVN 301
Query: 306 VFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
VFRGVVKMRRGLTA+VID TN M+DVY AFY+FS++++ KI+ NDPNA+ T RV+AI++
Sbjct: 302 VFRGVVKMRRGLTARVIDETNTMSDVYTAFYEFSSLIESKIDNNDPNASLTRKRVDAIKR 361
Query: 366 ACMDSGVLNKRFKILHYSK 384
C S L +R L SK
Sbjct: 362 TCKSSCSLKRRGYDLEKSK 380
>gi|212275798|ref|NP_001130502.1| uncharacterized protein LOC100191601 [Zea mays]
gi|194689326|gb|ACF78747.1| unknown [Zea mays]
Length = 403
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 283/376 (75%), Positives = 336/376 (89%), Gaps = 4/376 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L+ P+++ L+KL++A+ Q ++QIPPE HWAF YSML KVSRSFALVIQQLG
Sbjct: 1 MGALS----RPEEVLALVKLRVAAGQIKRQIPPEEHWAFAYSMLQKVSRSFALVIQQLGP 56
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSIPT+VKVPIL F+RHVY+R+WH+SCGT YKVLMD
Sbjct: 57 ELRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHVYNRDWHYSCGTNHYKVLMD 116
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FH VSTAFLELG+GYQ AIE+IT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG GL
Sbjct: 117 KFHLVSTAFLELGQGYQKAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGL 176
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LFYA+GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKY +KL
Sbjct: 177 SRLFYAAGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKL 236
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED KYEEN++KAVQCLND+VTNAL+H E+CL+YMSAL++HAIFRFCA+PQIMAIGT ALC
Sbjct: 237 EDFKYEENTEKAVQCLNDIVTNALIHAEECLQYMSALKNHAIFRFCAVPQIMAIGTCALC 296
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+ VFRGVVKMRRGLTA++ID TN+M+DVY AFY+FS++++ KI+ NDPNA T V
Sbjct: 297 YNNVHVFRGVVKMRRGLTARIIDETNSMSDVYTAFYEFSSLIESKIDDNDPNAALTRRHV 356
Query: 361 EAIQKACMDSGVLNKR 376
+I++ C SG++ +R
Sbjct: 357 NSIKQTCKSSGLVKRR 372
>gi|242037729|ref|XP_002466259.1| hypothetical protein SORBIDRAFT_01g004550 [Sorghum bicolor]
gi|241920113|gb|EER93257.1| hypothetical protein SORBIDRAFT_01g004550 [Sorghum bicolor]
Length = 403
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 283/376 (75%), Positives = 334/376 (88%), Gaps = 4/376 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L+ P+++ L+KL++A+ Q ++QIPPE HWAF YSML KVSRSFALVIQQL
Sbjct: 1 MGALS----RPEEVLALVKLRVAAGQIKRQIPPEEHWAFGYSMLQKVSRSFALVIQQLPP 56
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDDTSIPT+VKVPIL F+RH+Y+R+WHFSCGT Y+VLMD
Sbjct: 57 QLRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHIYNRDWHFSCGTNHYRVLMD 116
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
FHHVSTAFLELG+GYQ AIE+IT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG GL
Sbjct: 117 NFHHVSTAFLELGQGYQKAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGL 176
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LFYA+GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIP+ RMFWPREIWSKY +KL
Sbjct: 177 SRLFYATGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPRSRMFWPREIWSKYADKL 236
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED KYEENS+KAVQCLND+VTNAL+H E+CL+YMSAL+ HAIFRFCAIPQIMAIGT ALC
Sbjct: 237 EDFKYEENSEKAVQCLNDLVTNALIHAEECLQYMSALKGHAIFRFCAIPQIMAIGTCALC 296
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+ VFRGVVKMRRGLTA++ID TN+M DVY +FY+FS++++ KI+ NDPNA T RV
Sbjct: 297 YNNVHVFRGVVKMRRGLTARIIDETNSMADVYTSFYEFSSLIESKIDDNDPNAALTRRRV 356
Query: 361 EAIQKACMDSGVLNKR 376
++I++ C SG++ +R
Sbjct: 357 DSIKQTCKSSGLVKRR 372
>gi|145353033|ref|NP_195191.2| squalene synthase 2 [Arabidopsis thaliana]
gi|5678626|emb|CAA18844.2| putative squalene synthase [Arabidopsis thaliana]
gi|7270415|emb|CAB80182.1| putative squalene synthase [Arabidopsis thaliana]
gi|332661004|gb|AEE86404.1| squalene synthase 2 [Arabidopsis thaliana]
Length = 413
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 288/378 (76%), Positives = 335/378 (88%), Gaps = 2/378 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL+ +LRHPD+LYPLLKLK+A +A+KQIP EPH AFCYS+LHKVS+SF+LVIQQLGT
Sbjct: 1 MGSLSTILRHPDELYPLLKLKLAITKAQKQIPLEPHLAFCYSILHKVSKSFSLVIQQLGT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYL+LRALDTVEDDTS+P ++KVPILIAFHRH+YD +WHFSCGTKEYK+LMD
Sbjct: 61 ELRNAVCVFYLILRALDTVEDDTSVPVEIKVPILIAFHRHIYDGDWHFSCGTKEYKLLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVS AFL+L KGYQ+AIEDITKRMGAGMAKFICKEVE+IDDYDEYC+Y AGLVGLGL
Sbjct: 121 QFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
SK+F AS E L PD +SNS GLFLQKTNII+DYLEDINE PK RMFWPREIW KYV+
Sbjct: 181 SKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDYLEDINERPKSRMFWPREIWGKYVD 240
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLED K EE + KAVQCLN+MVTNAL HVEDCLK +++LRD AIF+ CAIPQI+AIGTLA
Sbjct: 241 KLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLA 300
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
LCYNN++VFRGVV++RRGL AKVIDRT M DVY AFYDFS +L+ K++ NDPNA KTL+
Sbjct: 301 LCYNNVQVFRGVVRLRRGLIAKVIDRTKTMDDVYGAFYDFSCMLQTKVDNNDPNAMKTLN 360
Query: 359 RVEAIQKACMDSGVLNKR 376
R+E I+K C ++G L+KR
Sbjct: 361 RLETIKKFCKENGGLHKR 378
>gi|414873457|tpg|DAA52014.1| TPA: hypothetical protein ZEAMMB73_299336 [Zea mays]
Length = 403
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 281/371 (75%), Positives = 331/371 (89%)
Query: 6 AVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L P+++ L+KL++A+ Q ++QIPPE HWAF YSML KVSRSFALVIQQLG +LRNA
Sbjct: 2 GALSRPEEVLALVKLRVAAGQIKRQIPPEEHWAFAYSMLQKVSRSFALVIQQLGPELRNA 61
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDTVEDDTSIPT+VKVPIL F+RHVY+R+WH+SCGT YKVLMD+FH V
Sbjct: 62 VCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHVYNRDWHYSCGTNHYKVLMDKFHLV 121
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
STAFLELG+GYQ AIE+IT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG GLS+LFY
Sbjct: 122 STAFLELGQGYQKAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGLSRLFY 181
Query: 186 ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY 245
A+GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKY +KLED KY
Sbjct: 182 AAGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFKY 241
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
EEN++KAVQCLND+VTNAL+H E+CL+YMSAL++HAIF FCAIPQIMAIGT ALCYNN+
Sbjct: 242 EENTEKAVQCLNDIVTNALIHAEECLQYMSALKNHAIFHFCAIPQIMAIGTCALCYNNVH 301
Query: 306 VFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
VFRGVVKMRRGLTA++ID TN+M+DVY AFY+FS++++ KI+ NDPNA T V +I++
Sbjct: 302 VFRGVVKMRRGLTARIIDETNSMSDVYTAFYEFSSLIESKIDDNDPNAALTRRHVNSIKQ 361
Query: 366 ACMDSGVLNKR 376
C SG++ +R
Sbjct: 362 TCKSSGLVKRR 372
>gi|162463458|ref|NP_001104839.1| squalene synthase1 [Zea mays]
gi|2463567|dbj|BAA22558.1| squalene synthase [Zea mays]
gi|224031363|gb|ACN34757.1| unknown [Zea mays]
gi|413932747|gb|AFW67298.1| Squalene synthase isoform 1 [Zea mays]
gi|413932748|gb|AFW67299.1| Squalene synthase isoform 2 [Zea mays]
Length = 401
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 281/376 (74%), Positives = 335/376 (89%), Gaps = 4/376 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L+ P+++ L+KL++A+ Q ++QIPPE HWAF YSML KVSRSFALVIQQLG
Sbjct: 1 MGALS----RPEEVLALVKLRVAAGQIKRQIPPEEHWAFAYSMLQKVSRSFALVIQQLGP 56
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVCIFYLVLRALDTVEDDTSIPT+VKVPIL F+RH+Y+R+WH+SCGT YK+LMD
Sbjct: 57 ELRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHIYNRDWHYSCGTNHYKMLMD 116
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+F HVSTAFLELG+GYQ AIE++T+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG GL
Sbjct: 117 KFRHVSTAFLELGEGYQKAIEEVTRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGL 176
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LFYA+GTEDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKY +KL
Sbjct: 177 SRLFYAAGTEDLALDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKL 236
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED KYEENS KAVQCLN+MVT+AL+H E+CL+YMSAL+D AIFRFCAIPQIMAIGT ALC
Sbjct: 237 EDFKYEENSKKAVQCLNNMVTDALIHAEECLQYMSALKDPAIFRFCAIPQIMAIGTCALC 296
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+ VFRGVVKMRRGLTA++ID TN+MTDVY AFY+FS++++ KI+ +DPNA T RV
Sbjct: 297 YNNVHVFRGVVKMRRGLTARIIDETNSMTDVYTAFYEFSSLIESKIDDSDPNAALTQRRV 356
Query: 361 EAIQKACMDSGVLNKR 376
++I++ C SG++ +R
Sbjct: 357 DSIKQTCKSSGLVKQR 372
>gi|222625999|gb|EEE60131.1| hypothetical protein OsJ_13016 [Oryza sativa Japonica Group]
Length = 413
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/389 (73%), Positives = 334/389 (85%), Gaps = 10/389 (2%)
Query: 6 AVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
VL P+++ PL+KL++A+ + ++QIPPE HWAF Y+ML +VSRSFALVIQQLG DLRNA
Sbjct: 2 GVLSRPEEVLPLVKLRVAAGRIKRQIPPEEHWAFAYTMLQRVSRSFALVIQQLGPDLRNA 61
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDTVEDDTSIP VKVPIL FHRH+Y+R+WH+SCGTK+YK+LMD+F V
Sbjct: 62 VCIFYLVLRALDTVEDDTSIPAAVKVPILKEFHRHIYNRDWHYSCGTKDYKLLMDKFRLV 121
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE----------VESIDDYDEYCYYVAGL 175
STAFLELG+GYQ+AIE+IT+ MGAGMAKFICKE VE++DDY+EYC+YVAGL
Sbjct: 122 STAFLELGQGYQEAIEEITRLMGAGMAKFICKEFHVQFLAVLSVETVDDYNEYCHYVAGL 181
Query: 176 VGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
VG GLS+LF+A GTEDLA DSLSNSMGLFLQK NIIRDYLEDINEIPK RMFWPREIWSK
Sbjct: 182 VGYGLSRLFHAGGTEDLASDSLSNSMGLFLQKINIIRDYLEDINEIPKSRMFWPREIWSK 241
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
YVNKLEDLKYEENS+KAVQCLNDMVTNAL H EDCL+YMSAL+DHAIFRFCAIPQIMAIG
Sbjct: 242 YVNKLEDLKYEENSEKAVQCLNDMVTNALSHAEDCLQYMSALKDHAIFRFCAIPQIMAIG 301
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
T A+CYNN+ VFRGVVKMRRGLTA+VID TN M+DVY AFY+FS++++ KI+ NDPNA+
Sbjct: 302 TCAICYNNVNVFRGVVKMRRGLTARVIDETNTMSDVYTAFYEFSSLIESKIDNNDPNASL 361
Query: 356 TLSRVEAIQKACMDSGVLNKRFKILHYSK 384
T RV+AI++ C S L +R L SK
Sbjct: 362 TRKRVDAIKRTCKSSCSLKRRGYDLEKSK 390
>gi|326511393|dbj|BAJ87710.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532364|dbj|BAK05111.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 275/379 (72%), Positives = 328/379 (86%)
Query: 6 AVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
VL P+++ L++LK+A+ + +QIPPE HWAF Y ML +VSRSFALVIQQLG +LRNA
Sbjct: 2 GVLSRPEEVAALVRLKVAAGRIRRQIPPEAHWAFAYDMLQRVSRSFALVIQQLGPELRNA 61
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VC+FYLVLRALDTVEDDT IP +VK+PIL F+RH+Y+ +W FSCG +Y+VLMD F V
Sbjct: 62 VCVFYLVLRALDTVEDDTGIPNEVKLPILRDFYRHIYNPDWLFSCGANDYRVLMDNFRQV 121
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
STAFLELG+GYQ AIE+IT+RMG GMAKFIC EV++IDDYDEYC+YVAGLVG GLS+LF+
Sbjct: 122 STAFLELGEGYQKAIEEITRRMGEGMAKFICMEVQTIDDYDEYCHYVAGLVGYGLSRLFH 181
Query: 186 ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY 245
A+GTEDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV+KLEDLKY
Sbjct: 182 ATGTEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVDKLEDLKY 241
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
EENS+KAVQCLNDMVTNAL+H DCL+YMSAL+D++ FRFCAIPQIMAIGT A+CYNN++
Sbjct: 242 EENSEKAVQCLNDMVTNALIHAHDCLQYMSALKDNSNFRFCAIPQIMAIGTCAICYNNVK 301
Query: 306 VFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
VFRGVVKMRRGLTA++ID T +++DVY AFY+FS++L+ KI+ NDPNA T RV+AI+K
Sbjct: 302 VFRGVVKMRRGLTARIIDETKSISDVYSAFYEFSSLLESKIDDNDPNAALTRKRVDAIKK 361
Query: 366 ACMDSGVLNKRFKILHYSK 384
C SG+L +R L SK
Sbjct: 362 TCKSSGLLKRRGYDLEKSK 380
>gi|1389893|gb|AAB02945.1| squalene synthase [Nicotiana tabacum]
Length = 376
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/376 (76%), Positives = 312/376 (82%), Gaps = 35/376 (9%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++PDDLYPL+KLK+A+R AEKQIPP PHW FCYSMLHKVSRSFALVIQQL
Sbjct: 1 MGSLRAILKNPDDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQ
Sbjct: 181 SKLFHASGKEDLASDSLSNSMGLFLQ---------------------------------- 206
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
+LKYE+NS KAVQCLNDMVTNAL HVEDCL YMSALRD +IFRFCAIPQ+MAIGTLA+C
Sbjct: 207 -ELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC 265
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
Y+NIEVFRGVVKMRRGLTAKVID+T + DVY AF+DFS +LK K+N NDPNATKTL R+
Sbjct: 266 YDNIEVFRGVVKMRRGLTAKVIDQTRTIADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL 325
Query: 361 EAIQKACMDSGVLNKR 376
EAI K C DSG LNKR
Sbjct: 326 EAILKTCRDSGTLNKR 341
>gi|357125055|ref|XP_003564211.1| PREDICTED: squalene synthase-like [Brachypodium distachyon]
Length = 402
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 271/384 (70%), Positives = 329/384 (85%), Gaps = 4/384 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L+ P+++ PL+K+ A+ + +QIPP+ HWAF Y ML KVSRSFALVIQQLG
Sbjct: 1 MGALS----RPEEVAPLVKMAAAAWRIRRQIPPQEHWAFAYDMLQKVSRSFALVIQQLGP 56
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLRALDTVEDDT +PT+VK+PIL F+RH+Y+ +WHFSCG Y+VLMD
Sbjct: 57 DLRNAVCIFYLVLRALDTVEDDTGVPTEVKLPILQEFYRHIYNPDWHFSCGRGHYRVLMD 116
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
F HVS AFLEL +GYQ+AIE+IT+RMGAGMA +ICKEVE++DDY+EYC+YVAGLVG GL
Sbjct: 117 NFRHVSIAFLELDQGYQNAIEEITRRMGAGMAIYICKEVETVDDYNEYCHYVAGLVGYGL 176
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LF+A+GTEDLA D LSNSMGLFLQKTNIIRDYLEDINEIP+CRMFWPREIWSKY ++L
Sbjct: 177 SRLFHATGTEDLASDQLSNSMGLFLQKTNIIRDYLEDINEIPRCRMFWPREIWSKYADEL 236
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLKYEENS++AVQCLNDMVTNAL+H EDCL+YMSAL+D+A FRFCAIPQIMAIGT A C
Sbjct: 237 EDLKYEENSERAVQCLNDMVTNALIHAEDCLQYMSALKDNANFRFCAIPQIMAIGTCAQC 296
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN++VFR VVKMRRGLTA+++D T +M+DVY AFY+FS++L+ KI+ NDP+A T RV
Sbjct: 297 YNNVQVFRRVVKMRRGLTARIMDETKSMSDVYTAFYEFSSLLESKIDDNDPSAAITRERV 356
Query: 361 EAIQKACMDSGVLNKRFKILHYSK 384
+AI+K C SG+L +R L S+
Sbjct: 357 DAIKKRCRSSGLLKRRGYDLQKSQ 380
>gi|116788032|gb|ABK24732.1| unknown [Picea sitchensis]
Length = 409
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/376 (72%), Positives = 320/376 (85%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGS+ +L+HP+D+ L+++K+A A KQIP EP AFC++ML +VSRSFA VIQQLG
Sbjct: 1 MGSIRTILKHPEDVPALVRMKIAQTHALKQIPSEPDLAFCFTMLQRVSRSFAFVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
DLRNAVCIFYLVLR LDTVEDDTSIP D K+PIL AF++H+YD WHFSCG K+YK LM+
Sbjct: 61 DLRNAVCIFYLVLRGLDTVEDDTSIPLDTKLPILEAFYKHIYDPSWHFSCGVKDYKELME 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+FHHVST FL LG+GYQ+AIE+ITKRMGAGMAKFIC EVES++DYDEYC+YVAGLVG GL
Sbjct: 121 KFHHVSTTFLRLGRGYQEAIEEITKRMGAGMAKFICSEVESVEDYDEYCHYVAGLVGYGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LF+A+ EDL PDSLSNSMGLFLQKTNIIRDYLEDINEIP RMFWPREIW+KYV+KL
Sbjct: 181 SRLFHAAQLEDLQPDSLSNSMGLFLQKTNIIRDYLEDINEIPAPRMFWPREIWAKYVSKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK EE S +AVQCLN+MVTNAL H DCLKY+S LRD AIFRFCAIPQIMAIGTL C
Sbjct: 241 EDLKEEEWSKEAVQCLNEMVTNALKHANDCLKYLSDLRDPAIFRFCAIPQIMAIGTLERC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNIEVFRGVVK+RRGLTAK+++RTN M DVY AF+DFS L K+ ++DPNA +TL+ +
Sbjct: 301 YNNIEVFRGVVKIRRGLTAKIMERTNTMADVYGAFFDFSRSLASKVPEDDPNAKETLNCI 360
Query: 361 EAIQKACMDSGVLNKR 376
+ IQ+ C SG+L +R
Sbjct: 361 DEIQRTCKASGLLARR 376
>gi|115471061|ref|NP_001059129.1| Os07g0200700 [Oryza sativa Japonica Group]
gi|34394799|dbj|BAC84212.1| putative squalene synthase [Oryza sativa Japonica Group]
gi|113610665|dbj|BAF21043.1| Os07g0200700 [Oryza sativa Japonica Group]
gi|215693272|dbj|BAG88654.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636626|gb|EEE66758.1| hypothetical protein OsJ_23470 [Oryza sativa Japonica Group]
Length = 410
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/380 (70%), Positives = 324/380 (85%), Gaps = 6/380 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPP----EPHWAFCYSMLHKVSRSFALVIQ 56
MG + A+L + L++L+ A+ + +++ + HWAF YSMLH+VSRSFA+VIQ
Sbjct: 1 MGVVGALL--GPEAEALVRLRAAAWRLRREVAAATDDDEHWAFAYSMLHRVSRSFAIVIQ 58
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK 116
QLG DLRNAVC+FYLVLRALDTVEDDTSIPT++KVPIL FHRH+Y+R+WHFSCGTK+ K
Sbjct: 59 QLGPDLRNAVCVFYLVLRALDTVEDDTSIPTEIKVPILQEFHRHIYNRDWHFSCGTKDCK 118
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLV 176
+LMD+FH+V TAFLELG GYQ+AIE+IT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLV
Sbjct: 119 ILMDKFHYVLTAFLELGSGYQEAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLV 178
Query: 177 GLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
G+GLS+LF+A+G EDLAP+SLSNSMGLFLQK NI RDYLEDINEIPK RMFWPREIWSKY
Sbjct: 179 GIGLSRLFHAAGLEDLAPESLSNSMGLFLQKVNITRDYLEDINEIPKSRMFWPREIWSKY 238
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+KLEDLKYE NS KAV+CLN+MVTN L+H EDCL+YMSAL+D I RFCAIPQ+MA+ T
Sbjct: 239 VDKLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCLRYMSALKDITILRFCAIPQVMALAT 298
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKT 356
ALCYNN+ VFRGVVK+RRGLTA++I+ TN+M DVY AFY+FS++L KI+ NDPNA+ T
Sbjct: 299 YALCYNNVNVFRGVVKLRRGLTARIINETNSMADVYTAFYEFSSLLAEKIDDNDPNASLT 358
Query: 357 LSRVEAIQKACMDSGVLNKR 376
RV AI++ C SG+L R
Sbjct: 359 RKRVNAIKETCKSSGLLKIR 378
>gi|112253710|gb|ABI14439.1| squalene synthase [Taxus cuspidata]
Length = 409
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 268/376 (71%), Positives = 313/376 (83%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
M S+ A+L+HP+D+ LLK+K A+ A KQIP +P AFCY+ML KVSRSFA VIQQLG
Sbjct: 1 MASIGAILKHPEDVPALLKMKFAAAHASKQIPLDPDLAFCYTMLQKVSRSFAFVIQQLGL 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LRNAVC+FYLVLR LDTVEDD SIP D K+PIL FH+H+YD WHFSCG +YK LMD
Sbjct: 61 ELRNAVCVFYLVLRGLDTVEDDMSIPVDTKLPILTNFHQHIYDPSWHFSCGVNDYKELMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFL LGK YQ+ IE+ITKRMGAGMAKFI +EVES++DYDEYC+YVAGLVGLGL
Sbjct: 121 QFHHVSTAFLALGKRYQEGIEEITKRMGAGMAKFIRQEVESVEDYDEYCHYVAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LF A+ EDLAPD LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWP EIWSKYV L
Sbjct: 181 SRLFRAACLEDLAPDFLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPHEIWSKYVPNL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
EDLK EE S +AVQCLN+M+TNAL H DCLKYM+AL++ AIFRFCAIPQIMA+ TL +C
Sbjct: 241 EDLKEEECSKEAVQCLNEMITNALKHANDCLKYMAALKNPAIFRFCAIPQIMALATLEIC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN++VFR VVK+RRGLTAK++DRT +M DVY AF+DFS L K+ K+DPNAT TL +
Sbjct: 301 YNNLQVFRRVVKIRRGLTAKIMDRTKSMADVYEAFFDFSGSLASKVPKDDPNATVTLKYI 360
Query: 361 EAIQKACMDSGVLNKR 376
+ IQ+ C SG++ KR
Sbjct: 361 DEIQRTCNASGLMAKR 376
>gi|357114995|ref|XP_003559279.1| PREDICTED: squalene synthase-like [Brachypodium distachyon]
Length = 403
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/363 (71%), Positives = 310/363 (85%), Gaps = 3/363 (0%)
Query: 17 LLKLKMASRQAEKQIPP---EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVL 73
L+KL++A+ + + QIPP E HWAF Y ML KVSRSFA VIQQLG DLRNAVCIFYL+L
Sbjct: 10 LVKLRVAAGRVKLQIPPQEEEEHWAFAYDMLQKVSRSFAFVIQQLGPDLRNAVCIFYLLL 69
Query: 74 RALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELG 133
RALDTVEDDTSIPT+VK+ IL FHRHVY+ WH+SCGT Y+VLMD+F +VSTAFLEL
Sbjct: 70 RALDTVEDDTSIPTEVKLTILQEFHRHVYNPSWHYSCGTGNYRVLMDKFRYVSTAFLELD 129
Query: 134 KGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+G Q+AI++ITKRMG GM+KFICKEVE++DDYDEYC+Y AGLVG GLS+LF+A+GTE+LA
Sbjct: 130 QGCQEAIKEITKRMGEGMSKFICKEVETVDDYDEYCHYAAGLVGYGLSRLFHAAGTENLA 189
Query: 194 PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
D LSNSMGLFLQK +II DY EDI+EIPK RMFWPREIWSKYV KLEDLKY+ENS+KAV
Sbjct: 190 SDQLSNSMGLFLQKIHIIGDYFEDISEIPKRRMFWPREIWSKYVEKLEDLKYKENSEKAV 249
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKM 313
QCLNDMVTNAL+H +DCL+YMSAL+D +FR CAIPQIMA+G A+CYNN+ VFRG+VKM
Sbjct: 250 QCLNDMVTNALIHAKDCLQYMSALKDDTVFRLCAIPQIMAMGNFAICYNNVNVFRGLVKM 309
Query: 314 RRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVL 373
R GLTA+VID T +M+DVY AFY+FS++L+ KI+ NDP+A T RV+AI+K C SG+L
Sbjct: 310 RHGLTARVIDETKSMSDVYTAFYEFSSLLESKIDDNDPSAALTRKRVDAIKKTCKSSGLL 369
Query: 374 NKR 376
+R
Sbjct: 370 KRR 372
>gi|20976923|gb|AAM27472.1| squalene synthase [Nicotiana tabacum]
Length = 290
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/290 (87%), Positives = 272/290 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+L++P+DLYPL+KLK+A+R AEKQIPP PHW FCYSMLHKVSRSFALVIQQL
Sbjct: 1 MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVSTAFLEL K YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+Y AGLVGLGL
Sbjct: 121 QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYEAGLVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
SKLF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINE+PKCRMFWPREIWSKYVNKL
Sbjct: 181 SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
E+LKYE+NS KAVQCLNDMVTNAL HVEDCL YMSALRD +IFRFCAIPQ
Sbjct: 241 EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQ 290
>gi|371927252|gb|AEX58673.1| squalene synthase [Huperzia serrata]
Length = 420
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/376 (66%), Positives = 298/376 (79%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG L VL+HP+++ LLK+K + + + Q+P +PH +FCY ML KVSRSFA+VIQQLG
Sbjct: 1 MGVLTTVLQHPNEVPALLKMKFMASRLKWQLPSDPHRSFCYEMLQKVSRSFAVVIQQLGP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYLVLR LDTVEDD SIP D KVPIL AFH +YD W F CG K+YKVLMD
Sbjct: 61 NLRDAVCVFYLVLRGLDTVEDDMSIPLDTKVPILKAFHETIYDPAWRFVCGEKDYKVLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QFHHVST FL L K +QD I +IT+RMG GMAKFI EVE+I+DY+EYC+YVAGLVG+GL
Sbjct: 121 QFHHVSTTFLNLDKKFQDVIAEITQRMGNGMAKFIVTEVETIEDYNEYCHYVAGLVGIGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
S+LF+ASG EDLA DSLSNSMGLFLQKTNIIRDYLEDINE P RMFWP EIW KY +L
Sbjct: 181 SRLFHASGLEDLATDSLSNSMGLFLQKTNIIRDYLEDINEEPAPRMFWPHEIWGKYSARL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
D K E+ SD ++ CLNDM+TNAL H D L+YMSALRD AIFRFCAIPQIMAI TLA C
Sbjct: 241 ADFKEEKKSDVSLACLNDMITNALEHAIDSLQYMSALRDGAIFRFCAIPQIMAIATLAAC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI+VFRGVVK+RRGL AK++ T++M DVY FYDFSN+L KI+K DP+++ T+ V
Sbjct: 301 YNNIQVFRGVVKIRRGLAAKIVLETSSMKDVYSTFYDFSNMLTAKIDKQDPSSSTTMKHV 360
Query: 361 EAIQKACMDSGVLNKR 376
E I C SG+ + R
Sbjct: 361 ENILSTCRASGIPHNR 376
>gi|206573500|gb|ACI14294.1| squalene synthase [Linum usitatissimum]
Length = 271
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/271 (88%), Positives = 258/271 (95%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
AEKQIPP PHW FCY+ML KVSRSFALVIQQLGT+LR+AVCIFYLVLRALDTVEDDTSI
Sbjct: 1 AEKQIPPHPHWGFCYTMLLKVSRSFALVIQQLGTELRDAVCIFYLVLRALDTVEDDTSIA 60
Query: 87 TDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
T+VKVPIL FHRH+YD+EWHFSCGTK+YKVLMD+FHHVSTAFLELG+GYQ+AIEDITKR
Sbjct: 61 TEVKVPILNDFHRHIYDQEWHFSCGTKDYKVLMDEFHHVSTAFLELGRGYQEAIEDITKR 120
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
MG GMAKFI KEVES+DDYDEYC+YVAGLVGLGLSKLF+ASG EDLAPD LSNSMGLFLQ
Sbjct: 121 MGDGMAKFILKEVESLDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDDLSNSMGLFLQ 180
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMH 266
KTNIIRDYLEDINEIPK RMFWPREIWSKYV+KLEDLKYEENS KAVQCLNDMVTNAL+H
Sbjct: 181 KTNIIRDYLEDINEIPKSRMFWPREIWSKYVSKLEDLKYEENSVKAVQCLNDMVTNALIH 240
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
++DC+KY+SALRD AIFRFCAIPQIMAIGTL
Sbjct: 241 MDDCVKYLSALRDPAIFRFCAIPQIMAIGTL 271
>gi|125546109|gb|EAY92248.1| hypothetical protein OsI_13969 [Oryza sativa Indica Group]
Length = 397
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/316 (74%), Positives = 270/316 (85%), Gaps = 10/316 (3%)
Query: 79 VEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQD 138
EDDTSIP VKVPIL FHRH+Y+R+WH+SCGTK+YK+LMD+F VSTAFLELG+GYQ+
Sbjct: 59 AEDDTSIPAAVKVPILKEFHRHIYNRDWHYSCGTKDYKLLMDKFRLVSTAFLELGQGYQE 118
Query: 139 AIEDITKRMGAGMAKFICKE----------VESIDDYDEYCYYVAGLVGLGLSKLFYASG 188
AIE+IT+ MGAGMAKFICKE VE++DDY+EYC+YVAGLVG GLS+LF+A G
Sbjct: 119 AIEEITRLMGAGMAKFICKEFHVQFLAVLSVETVDDYNEYCHYVAGLVGYGLSRLFHAGG 178
Query: 189 TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
TEDLA DSLSNSMGLFLQK NIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLKYEEN
Sbjct: 179 TEDLASDSLSNSMGLFLQKINIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEEN 238
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR 308
S+KAVQCLNDMVTNAL H EDCL+YMSAL+DHAIFRFCAIPQIMAIGT A+CYNN+ VFR
Sbjct: 239 SEKAVQCLNDMVTNALSHAEDCLQYMSALKDHAIFRFCAIPQIMAIGTCAICYNNVNVFR 298
Query: 309 GVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACM 368
GVVKMRRGLTA+VID TN M+DVY AFY+FS++++ KI+ NDPNA+ T RV+AI++ C
Sbjct: 299 GVVKMRRGLTARVIDETNTMSDVYTAFYEFSSLIESKIDNNDPNASLTRKRVDAIKRTCK 358
Query: 369 DSGVLNKRFKILHYSK 384
S L +R L SK
Sbjct: 359 SSCSLKRRGYDLEKSK 374
>gi|168046876|ref|XP_001775898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672730|gb|EDQ59263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/383 (60%), Positives = 294/383 (76%), Gaps = 1/383 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG + +++HPD++ PL+KLK+A+ +A+K IP +P+ AFCY ML +VSRSF++VIQQL
Sbjct: 1 MGIIGTLVKHPDEIPPLIKLKIAAHRAQKAIPKDPNLAFCYRMLTRVSRSFSIVIQQLSP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYLVLR LDTVEDD +IP D+KVPIL AFH+H+YD W FSCG K+YK LM+
Sbjct: 61 ELRDAVCVFYLVLRGLDTVEDDMAIPIDIKVPILKAFHKHIYDPSWKFSCGEKDYKELMN 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+F VS AFL L +GYQ I ++T+RMG GMAKFI EV ++DDYDEYC+YVAG+VGLGL
Sbjct: 121 KFELVSNAFLNLEEGYQKVIAEMTERMGNGMAKFIESEVSTVDDYDEYCHYVAGIVGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
++LF+ASG E PD LSNSMGLFLQKTNIIRDYLEDINEIP RMFWP E+W KY KL
Sbjct: 181 TRLFHASGLEAFKPDDLSNSMGLFLQKTNIIRDYLEDINEIPAPRMFWPHEVWGKYATKL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED K+E+NS A++CLN ++TNAL H DCLKYM + RFCAIPQIMAI TLA C
Sbjct: 241 EDFKHEDNSQNALRCLNALITNALAHATDCLKYMEDINQEDNLRFCAIPQIMAIATLAEC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVK+RRG+TAK++ +T M DVY F+DFS + KI+ ND +A+ T +
Sbjct: 301 YNNINVFRGVVKIRRGITAKIM-QTRTMGDVYGTFFDFSKKIAAKIDDNDDSASVTRKHI 359
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
E IQ+ C + ++ I +YS
Sbjct: 360 EDIQEYCESHLLEPEKSYIQNYS 382
>gi|145346006|ref|XP_001417488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577715|gb|ABO95781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 456
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/371 (57%), Positives = 285/371 (76%), Gaps = 5/371 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L AVL HP D+ PL+++KM + A K++P +P A+CY +L+KVSRSFA+VIQ+L
Sbjct: 1 MGALRAVLSHPGDVAPLVRVKMMA-NAAKRLPKDPDLAYCYDVLNKVSRSFAIVIQRLDA 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYLVLRALDTVEDD SIP + KVP L+AFH ++YD + CG K YK LM
Sbjct: 60 ELRDAVCVFYLVLRALDTVEDDMSIPIERKVPDLLAFHEYIYDANYSADCGEKHYKDLMK 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+ V++ FL L K Y+ I DITKRMG GMAKFI KEV + D+DEYC+YVAGLVG+GL
Sbjct: 120 NYPRVTSVFLGLKKEYRTVIADITKRMGHGMAKFIEKEVMDMADFDEYCHYVAGLVGIGL 179
Query: 181 SKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S L+ S E + + LSN+MGLFLQKTNIIRDYLEDI E+P RMFWPR +WSKY
Sbjct: 180 SNLWGVSKMESAEFVGEEKLSNAMGLFLQKTNIIRDYLEDIQELPAPRMFWPRSVWSKYA 239
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+L+DL++EEN +KAVQC+N+++TNAL H DCLKYMS +++ +IFRFCAIPQ+MAI TL
Sbjct: 240 EELDDLQHEENREKAVQCMNELITNALSHSLDCLKYMSRVKEISIFRFCAIPQVMAIATL 299
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN-KNDPNATKT 356
A CY N VF+GVVK+RRGL+A+++ + NNM ++ F F+N L K++ K+DPN +T
Sbjct: 300 AECYGNENVFKGVVKIRRGLSARIMLKCNNMLELASGFKHFANELVHKVDPKSDPNGEET 359
Query: 357 LSRVEAIQKAC 367
++R+EA+++AC
Sbjct: 360 MARIEALEEAC 370
>gi|168007955|ref|XP_001756673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692269|gb|EDQ78627.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/367 (56%), Positives = 272/367 (74%), Gaps = 1/367 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG + A+L++P+DL+ LLKLKMAS A + IP +P+ AFCY ML +VS SF++VI QL
Sbjct: 1 MGIIGAILKNPEDLHHLLKLKMASAAANRAIPSDPNLAFCYQMLRRVSGSFSIVILQLEP 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVC+FYLVLR L VEDD +IP D+KV +L H+ ++DR++HF CG +YK+LMD
Sbjct: 61 GLRNAVCVFYLVLRGLQAVEDDLTIPYDLKVELLRNLHKKIFDRDFHFPCGNNDYKLLMD 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+F+ V AFL L GYQ+ I +IT+RMG GM K++ E+ S +DY+EYC++ AGL+GLGL
Sbjct: 121 KFYLVILAFLGLTTGYQEVITEITERMGEGMVKYLNTEIISREDYNEYCHFSAGLMGLGL 180
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
+++FY +G E PD LSN+MGLFLQKTN+IRDYLE+IN P R+ WP+E+WSKY +K
Sbjct: 181 TRIFYTAGMEQFTPDYLSNAMGLFLQKTNVIRDYLENINAQPTSRLRWPKEVWSKYADKP 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E E N + + CLN+MVT+AL H DCL YM+AL+D RFCA QI A+GTLA+C
Sbjct: 241 EAFMDETNYKQGLHCLNEMVTDALSHGLDCLHYMAALQDQPNLRFCATFQITALGTLAMC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN+EVFRG V+MRRGLTAK++D NM DVY AFYDF+ ++ KI+K DP+A T V
Sbjct: 301 YNNVEVFRGSVRMRRGLTAKILD-VKNMVDVYGAFYDFTRLIAAKIDKTDPSAVTTHKFV 359
Query: 361 EAIQKAC 367
+ I+ C
Sbjct: 360 DDIRSIC 366
>gi|224028763|gb|ACN33457.1| unknown [Zea mays]
Length = 275
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/258 (77%), Positives = 235/258 (91%)
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGL 178
MD+FH VSTAFLELG+GYQ AIE+IT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG
Sbjct: 1 MDKFHLVSTAFLELGQGYQKAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGY 60
Query: 179 GLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
GLS+LFYA+GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKY +
Sbjct: 61 GLSRLFYAAGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYAD 120
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLED KYEEN++KAVQCLND+VTNAL+H E+CL+YMSAL++HAIFRFCAIPQIMAIGT A
Sbjct: 121 KLEDFKYEENTEKAVQCLNDIVTNALIHAEECLQYMSALKNHAIFRFCAIPQIMAIGTCA 180
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
LCYNN+ VFRGVVKMRRGLTA++ID TN+M+DVY AFY+FS++++ KI+ NDPNA T
Sbjct: 181 LCYNNVHVFRGVVKMRRGLTARIIDETNSMSDVYTAFYEFSSLIESKIDDNDPNAALTRR 240
Query: 359 RVEAIQKACMDSGVLNKR 376
V +I++ C SG++ +R
Sbjct: 241 HVNSIKQTCKSSGLVKRR 258
>gi|302780353|ref|XP_002971951.1| hypothetical protein SELMODRAFT_96714 [Selaginella moellendorffii]
gi|300160250|gb|EFJ26868.1| hypothetical protein SELMODRAFT_96714 [Selaginella moellendorffii]
Length = 392
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/392 (56%), Positives = 278/392 (70%), Gaps = 16/392 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG + A++RHP +L LL++K+A+ +A P +PH A+CY +L VSRSFA+V+Q L
Sbjct: 1 MGMVEALIRHPGELPALLQMKLAAARAAHAFPADPHMAYCYRILLLVSRSFAVVVQHLNQ 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
++R+AVCIFY+VLRALDTVEDD SIP + K +L F++H+ D W F C Y VLM
Sbjct: 61 EIRDAVCIFYVVLRALDTVEDDMSIPVETKTTVLEEFYKHLEDPSWRFVCKWNFYIVLMK 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-VESIDDYDEYCYYVAGLVGLG 179
F+H+S AFL+L K YQ I DITKRMG GMA+FI KE V ++ DYD+YCYYVAGLVG+G
Sbjct: 121 NFNHLSLAFLQLSKEYQCVISDITKRMGYGMAEFIRKEVVVTVSDYDKYCYYVAGLVGVG 180
Query: 180 LSKLFYASGTED-------------LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
LS LF +S ED L P+ + SMG FLQK NIIRDYLEDINE+P RM
Sbjct: 181 LSHLFNSSRLEDLDQRLIEPDNDQSLVPEYPAISMGRFLQKVNIIRDYLEDINELPAPRM 240
Query: 227 FWPREIWSKY--VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
FWPREIW KY + L D + E N +AV+CLNDM+T+ L H +CL YMS L++ ++FR
Sbjct: 241 FWPREIWGKYAPTSLLSDFRDESNEKEAVECLNDMITDCLRHAPECLFYMSKLKNPSVFR 300
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCA+PQ+MAI T A+CYNN +VFRGVVK+RRG TAK+I TNNM DV AFYDF++IL
Sbjct: 301 FCAVPQVMAIATAAVCYNNPQVFRGVVKIRRGTTAKIIVTTNNMADVCGAFYDFASILAS 360
Query: 345 KINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
KINKNDP+A RVE I KAC G+ + R
Sbjct: 361 KINKNDPSALIAAERVENIFKACRQYGLSSSR 392
>gi|303277505|ref|XP_003058046.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460703|gb|EEH57997.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 454
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/370 (55%), Positives = 270/370 (72%), Gaps = 4/370 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L +L+HP D PL+++KM + +A K++P EP+ AFCY ML+KVSRSFA+VIQQL
Sbjct: 1 MGALTLLLKHPSDFIPLVRVKMMADKA-KKLPKEPNLAFCYDMLNKVSRSFAIVIQQLPH 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+L++AVCIFYLVLRALDT+EDD +IP K P L FH+ +YD ++ + CG K YK LMD
Sbjct: 60 ELQDAVCIFYLVLRALDTIEDDMAIPEKTKCPELEKFHQKIYDPKYVYPCGEKHYKRLMD 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
++ V+ FL L K YQD I DITKRMG GM+ FI +EV S+ D+DEYC+YVAGLVG+GL
Sbjct: 120 EYTKVTAVFLSLKKEYQDVIADITKRMGKGMSNFIRREVVSLKDWDEYCHYVAGLVGIGL 179
Query: 181 SKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S L+ S ED ++LSNSMGLFLQKTNIIRDYLEDI E P RMFWP+ IWSKY
Sbjct: 180 SNLWANSLLEDKRFAKEENLSNSMGLFLQKTNIIRDYLEDIVEEPAPRMFWPKCIWSKYG 239
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
L+ ++ EN D AV C+N ++TNAL H D L YM L++ +FRFCAIPQ+MAI TL
Sbjct: 240 ETLDVFRHPENRDAAVSCMNHLITNALEHGLDSLAYMKQLKNIDVFRFCAIPQVMAIATL 299
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
A CY+N +VF GVVK+RRGL+A+++ +T ++ DV + F +S ++ K+N DPNAT+T
Sbjct: 300 AECYDNGKVFEGVVKIRRGLSAQIMLKTLDIYDVAVQFKSYSAVIASKVNDRDPNATETR 359
Query: 358 SRVEAIQKAC 367
+ AI C
Sbjct: 360 KNLSAIVAKC 369
>gi|412985809|emb|CCO17009.1| squalene synthase [Bathycoccus prasinos]
Length = 462
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/362 (55%), Positives = 266/362 (73%), Gaps = 6/362 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+++ +LRHP D++PLL++K + +A K++P E + AFCY ML+KVSRSFA+VIQQL
Sbjct: 1 MGAISVLLRHPFDVFPLLRVKKMADEA-KKLPKEENLAFCYDMLNKVSRSFAIVIQQLDE 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREW-HFSCGTKEYKVLM 119
+LR+AVCIFYLVLRALDT+EDD +I KVP L+ FH +YD E+ H +CG K YK LM
Sbjct: 60 ELRDAVCIFYLVLRALDTIEDDMAIDNAEKVPQLLKFHEDIYDPEYKHLTCGEKHYKTLM 119
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLG 179
++ V+ FL L K Y+D I DIT+RMG GMA FI EV ++ D+D YC+YVAGLVG+G
Sbjct: 120 VEYPKVTNVFLRLKKPYKDVIADITRRMGKGMADFIESEVNTLKDWDVYCHYVAGLVGIG 179
Query: 180 LSKLFYASGTED----LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
LS L+ S E+ + LSN+MGLFLQKTNI+RDYLEDI EIP+ RMFWPR +W K
Sbjct: 180 LSDLWAGSKLEEKKFKTEMEDLSNAMGLFLQKTNIVRDYLEDIQEIPRPRMFWPRVVWGK 239
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
Y L+DL+Y++N AV CLN+++TNAL H D L+YMS ++ +IFRFCAIPQ+MAI
Sbjct: 240 YATSLDDLQYKKNRTNAVHCLNELITNALTHACDSLEYMSRVKTPSIFRFCAIPQVMAIA 299
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
TLA CY+N +VF GVVK+RRGL+A+++ +N+ + F F ILK K+ K DPN +
Sbjct: 300 TLAECYDNGKVFEGVVKIRRGLSARIMLSSNDTYQIGQGFKHFVKILKNKVRKEDPNRKE 359
Query: 356 TL 357
T+
Sbjct: 360 TM 361
>gi|384253425|gb|EIE26900.1| farnesyl-diphosphate farnesyltransferase [Coccomyxa subellipsoidea
C-169]
Length = 347
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/345 (59%), Positives = 253/345 (73%), Gaps = 4/345 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG L VL HPD+L PL+++ A+++A K +P + AFCY ML++VSRSFA+VIQ+L T
Sbjct: 1 MGKLREVLEHPDELIPLVQMAFAAKRA-KVLPKDKSLAFCYDMLNRVSRSFAVVIQRLPT 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYLVLRALDTVEDD ++P KVP+L FH +YDR W SCG Y LM
Sbjct: 60 ELRDAVCLFYLVLRALDTVEDDMAVPVATKVPLLRVFHEKIYDRSWKMSCGYGPYVDLMQ 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
Q+ V+ AFL L YQ I DIT+RMG GMA+FI KEV S+ DYD YC+YVAGLVG+GL
Sbjct: 120 QYSLVTDAFLRLKPMYQKVIADITRRMGEGMAEFIEKEVISVKDYDLYCHYVAGLVGIGL 179
Query: 181 SKLFYASG--TEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF +S +E+ A + L+N MGLFLQKTNIIRDYLEDINE P RMFWP+E+W +Y
Sbjct: 180 SQLFASSQLESEEFADMEFLANHMGLFLQKTNIIRDYLEDINEEPAPRMFWPKEVWGRYT 239
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
KL+ K ENS A+ CLN++VT+AL H L YM+ LRD +FRFCAIPQ+MAIGTL
Sbjct: 240 RKLDSFKAPENSAAALGCLNELVTDALCHAPHSLAYMAKLRDQDVFRFCAIPQVMAIGTL 299
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
ALCYNN VF GVVKMRRG TAK + + +M D+Y AF F+ L
Sbjct: 300 ALCYNNHRVFTGVVKMRRGETAKYVQQLGSMADLYEAFDHFAGSL 344
>gi|159490972|ref|XP_001703447.1| farnesyl-diphosphate farnesyltransferase [Chlamydomonas
reinhardtii]
gi|158280371|gb|EDP06129.1| farnesyl-diphosphate farnesyltransferase [Chlamydomonas
reinhardtii]
Length = 378
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/370 (54%), Positives = 255/370 (68%), Gaps = 4/370 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG L +L HP+++ PLL++ A+++A K +P +P AFCY ML+ VSRSFA+VIQQL
Sbjct: 1 MGKLGELLSHPNEIMPLLRMYRAAKRATK-LPKDPDLAFCYGMLNDVSRSFAIVIQQLPN 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+++C+FYLVLR LDTVEDD ++ D K+P L FH +YDR + CG YK LM
Sbjct: 60 PLRDSICVFYLVLRGLDTVEDDMALDVDFKLPELRRFHERIYDRGFTMECGYNHYKRLMA 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QF V FL L +Q I DIT+RMG GMA+FI KEV ++ DYD+YC+YVAGLVG+GL
Sbjct: 120 QFGVVVNVFLALPPPHQAVIADITRRMGYGMAEFIEKEVVTVADYDKYCHYVAGLVGIGL 179
Query: 181 SKLFYASGTEDLA---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF ASG E + + L+N MGLFLQKTNIIRDYLEDI E P RMFWPR+IW KY
Sbjct: 180 SQLFAASGLEANSIGTEEDLANHMGLFLQKTNIIRDYLEDILEEPAPRMFWPRDIWGKYA 239
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
L D K N AV+CLNDM+T+AL H+ CL YM LR +FRFCAIPQIMA GTL
Sbjct: 240 PALADFKEPANRGAAVRCLNDMITDALRHLPYCLAYMEQLRHVMVFRFCAIPQIMAAGTL 299
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
A CYNN VF GVVKMRRG TA++ + N++ D+Y F F ++ K++ DP+ T
Sbjct: 300 AACYNNGRVFEGVVKMRRGETARIFETCNDLGDLYTWFLQFLAAMEAKVDPTDPSLPLTR 359
Query: 358 SRVEAIQKAC 367
R+ +KAC
Sbjct: 360 QRIAEARKAC 369
>gi|255075563|ref|XP_002501456.1| predicted protein [Micromonas sp. RCC299]
gi|226516720|gb|ACO62714.1| predicted protein [Micromonas sp. RCC299]
Length = 455
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/370 (54%), Positives = 267/370 (72%), Gaps = 4/370 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L+ +L+HP D+ PL ++K + QA K++P EP+ FCY ML+ VSRSFA+VIQQL
Sbjct: 1 MGALSLILKHPGDILPLYRVKCMADQA-KKLPKEPNLRFCYHMLNLVSRSFAIVIQQLPH 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+L++AVC+FYLVLRALDTVEDD SIP K L F + +YD E+ + CG K YKVLMD
Sbjct: 60 ELQDAVCVFYLVLRALDTVEDDMSIPDKPKCAELEIFWKKIYDPEYVYPCGEKHYKVLMD 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
++ V+ FL L K YQD I DITKRMGAGM+ FI +EV +++D+DEYC+YVAGLVG+GL
Sbjct: 120 EYPKVTAVFLSLKKEYQDVIADITKRMGAGMSNFIKREVVTLEDWDEYCHYVAGLVGIGL 179
Query: 181 SKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S L+ S ED + LSN+MGLFLQKTNIIRDYLEDI E P RMFWP+ IWSK+
Sbjct: 180 SNLWANSMLEDKRFAEMEDLSNAMGLFLQKTNIIRDYLEDIMEEPAPRMFWPKCIWSKHG 239
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
L+ K EN AV C+N+++TN L H D L+YM+ L++ +FRFCAIPQ+MAI T+
Sbjct: 240 KTLDAFKEPENRAAAVACMNELITNGLTHATDSLEYMTRLKNVDVFRFCAIPQVMAIATM 299
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
A CY+N +VF GVVK+RRGL+A+++ + DV + F ++ ++ K+ K DP+A KTL
Sbjct: 300 AECYDNGKVFEGVVKIRRGLSARIMLECEDKFDVAVMFKRYAQAIRDKVRKEDPSAKKTL 359
Query: 358 SRVEAIQKAC 367
+EAI K C
Sbjct: 360 KELEAIDKRC 369
>gi|302830378|ref|XP_002946755.1| hypothetical protein VOLCADRAFT_79344 [Volvox carteri f.
nagariensis]
gi|300267799|gb|EFJ51981.1| hypothetical protein VOLCADRAFT_79344 [Volvox carteri f.
nagariensis]
Length = 447
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/354 (57%), Positives = 249/354 (70%), Gaps = 8/354 (2%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG L VL HPD+ PL+++ A+++A + +P +P AFCY +L+ VSRSFA+VIQQL
Sbjct: 1 MGKLGEVLSHPDEFLPLVRMARAAQKATR-LPKDPDLAFCYGILNDVSRSFAIVIQQLPN 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+A+C+FYLVLR LDTVEDD ++ KVP L +FH +YDR + +CG K YK LM
Sbjct: 60 PLRDAICVFYLVLRGLDTVEDDMALEVSFKVPQLRSFHERIYDRGFTMACGYKHYKRLMA 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
QF V FL L +Q I DIT+RMG GMA FI KEVE++ DYD YC+YVAGLVG+GL
Sbjct: 120 QFGTVVNVFLSLEPAHQKVIADITRRMGHGMADFIEKEVEAVKDYDLYCHYVAGLVGIGL 179
Query: 181 SKLFYASGTEDLAPDS---LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF ASG E + S L+N MGLFLQKTNIIRDYLEDI E P RMFWPREIW +Y
Sbjct: 180 SQLFAASGLESPSIGSEEDLANHMGLFLQKTNIIRDYLEDIMEEPAPRMFWPREIWGRYG 239
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
LE K N +AVQCLN MVT+AL H+ CL+YM L+ +FRFCAIPQIMA GTL
Sbjct: 240 PSLEHFKDPVNRKQAVQCLNHMVTDALRHLPYCLQYMKQLKHVLVFRFCAIPQIMAAGTL 299
Query: 298 ALCYNNIEVFRG----VVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN 347
ALCYNN +VF G VVKMRRG TAKV + N+M D+Y F F +LK K++
Sbjct: 300 ALCYNNGKVFEGEMVCVVKMRRGQTAKVFETCNDMGDLYRWFIRFLEMLKTKVS 353
>gi|326512650|dbj|BAJ99680.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/238 (76%), Positives = 212/238 (89%)
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
MG GMAKFIC EV++IDDYDEYC+YVAGLVG GLS+LF+A+GTEDLAPD LSNSMGLFLQ
Sbjct: 1 MGEGMAKFICMEVQTIDDYDEYCHYVAGLVGYGLSRLFHATGTEDLAPDHLSNSMGLFLQ 60
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMH 266
KTNIIRDYLEDINEIPKCRMFWPREIWSKYV+KLEDLKYEENS+KAVQCLNDMVTNAL+H
Sbjct: 61 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVDKLEDLKYEENSEKAVQCLNDMVTNALIH 120
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTN 326
DCL+YMSAL+D++ FRFCAIPQIMAIGT A+CYNN++VFRGVVKMRRGLTA++ID T
Sbjct: 121 AHDCLQYMSALKDNSNFRFCAIPQIMAIGTCAICYNNVKVFRGVVKMRRGLTARIIDETK 180
Query: 327 NMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYSK 384
+++DVY AFY+FS++L+ KI+ NDPNA T RV+AI+K C SG+L +R L SK
Sbjct: 181 SISDVYSAFYEFSSLLESKIDDNDPNAALTRKRVDAIKKTCKSSGLLKRRGYDLEKSK 238
>gi|414873458|tpg|DAA52015.1| TPA: hypothetical protein ZEAMMB73_299336 [Zea mays]
Length = 261
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 177/230 (76%), Positives = 208/230 (90%)
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
MGAGMAKFICKEVE++DDYDEYC+YVAGLVG GLS+LFYA+GTEDLAPDSLSNSMGLFLQ
Sbjct: 1 MGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGLSRLFYAAGTEDLAPDSLSNSMGLFLQ 60
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMH 266
KTNIIRDYLEDINEIPK RMFWPREIWSKY +KLED KYEEN++KAVQCLND+VTNAL+H
Sbjct: 61 KTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFKYEENTEKAVQCLNDIVTNALIH 120
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTN 326
E+CL+YMSAL++HAIF FCAIPQIMAIGT ALCYNN+ VFRGVVKMRRGLTA++ID TN
Sbjct: 121 AEECLQYMSALKNHAIFHFCAIPQIMAIGTCALCYNNVHVFRGVVKMRRGLTARIIDETN 180
Query: 327 NMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
+M+DVY AFY+FS++++ KI+ NDPNA T V +I++ C SG++ +R
Sbjct: 181 SMSDVYTAFYEFSSLIESKIDDNDPNAALTRRHVNSIKQTCKSSGLVKRR 230
>gi|342209232|gb|AEL16716.1| squalene synthase-like 2 [Botryococcus braunii]
Length = 465
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/374 (50%), Positives = 244/374 (65%), Gaps = 8/374 (2%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
M L VL+HPD++ P+L++ + +A++ +P AFCY ML +VSRSF++VIQQL
Sbjct: 1 MVKLVEVLQHPDEIVPILQMLHKTYRAKRSYK-DPGLAFCYGMLQRVSRSFSVVIQQLPD 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+ +C+FYL+LRALDTVEDD ++P +VK+P+L FH H++DR W CG Y LM+
Sbjct: 60 ELRHPICVFYLILRALDTVEDDMNLPNEVKIPLLRTFHEHLFDRSWKLKCGYGPYVDLME 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESIDDYDEYCYYVAGLVGLG 179
+ V+ FL L G Q+ I D T+RMG GMA FI K EV S+ +YD YC+YVAGLVG
Sbjct: 120 NYPLVTDVFLTLSPGAQEVIRDSTRRMGNGMADFIGKDEVHSVAEYDLYCHYVAGLVGSA 179
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++K+F SG E +A L+N+MG FLQKTN+IRDYLEDINE P RMFWPREIW KY
Sbjct: 180 VAKIFVDSGLEKENLVAEVDLANNMGQFLQKTNVIRDYLEDINEEPAPRMFWPREIWGKY 239
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
+L D K N AVQCLN MVT+AL H E L + L++ I R C IP++M + T
Sbjct: 240 AQELADFKDPANEKAAVQCLNHMVTDALRHCEIGLNVIPLLQNIGILRSCLIPEVMGLRT 299
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN---KNDPNA 353
L LCYNN +VFRGVVKMRRG TAK+ + Y + +N L+ K DP
Sbjct: 300 LTLCYNNPQVFRGVVKMRRGETAKLFMSIYDKRSFYQTYLRLANELEAKCKGEASGDPMV 359
Query: 354 TKTLSRVEAIQKAC 367
TL V IQK+C
Sbjct: 360 ATTLKHVHGIQKSC 373
>gi|6636500|gb|AAF20201.1|AF205791_1 squalene synthase [Botryococcus braunii]
Length = 461
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 192/371 (51%), Positives = 250/371 (67%), Gaps = 12/371 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
L++PD+L P+L++ A + + + P + FCY +L+ VSRSFA+VIQQL LR+ VC
Sbjct: 11 LQNPDELIPVLRMIYADKFGKIK-PKDEDRGFCYEILNLVSRSFAIVIQQLPAQLRDPVC 69
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG-TKEYKVLMDQFHHVS 126
IFYLVLRALDTVEDD I K+P+L F+ + DR + + G K+Y L+DQ+ V+
Sbjct: 70 IFYLVLRALDTVEDDMKIAATTKIPLLRDFYEKISDRSFRMTAGDQKDYIRLLDQYPKVT 129
Query: 127 TAFLELGKGYQDAIEDITKRMGAGMAKFICKEV-ESIDDYDEYCYYVAGLVGLGLSKLFY 185
+ FL+L Q+ I DITKRMG GMA F+ K V +++ DYD YC+YVAG+VGLGLS+LF
Sbjct: 130 SVFLKLTPREQEIIADITKRMGNGMADFVHKGVPDTVGDYDLYCHYVAGVVGLGLSQLFV 189
Query: 186 ASGTEDLA---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
ASG + + + LSN MGLFLQKTNIIRDY EDINE+P RMFWPREIW KY N L +
Sbjct: 190 ASGLQSPSLTRSEDLSNHMGLFLQKTNIIRDYFEDINELPAPRMFWPREIWGKYANNLAE 249
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
K N A+ CLN+MVT+AL H CL+YMS + D IF FCAIPQ MA GTL+LCYN
Sbjct: 250 FKDPANKAAAMCCLNEMVTDALRHAVYCLQYMSMIEDPQIFNFCAIPQTMAFGTLSLCYN 309
Query: 303 NIEVFRG---VVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN---KNDPNATKT 356
N +F G VK+RRG TAK++ +NNM +Y F +F+ L+ + N DP+ T T
Sbjct: 310 NYTIFTGPKAAVKLRRGTTAKLMYTSNNMFAMYRHFLNFAEKLEVRCNTETSEDPSVTTT 369
Query: 357 LSRVEAIQKAC 367
L + I+ AC
Sbjct: 370 LEHLHKIKAAC 380
>gi|86129502|ref|NP_001034383.1| squalene synthase [Gallus gallus]
gi|53130606|emb|CAG31632.1| hypothetical protein RCJMB04_8p18 [Gallus gallus]
Length = 418
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/383 (49%), Positives = 253/383 (66%), Gaps = 13/383 (3%)
Query: 8 LRHPDDLYPLLKLKMAS-RQAEKQIPPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP+D+Y LL+ KM R ++ P+ CY L++ SRSFA VIQ L +LR
Sbjct: 8 LGHPEDIYHLLRFKMGGYRAVMPRMDPDSLGLGLRTCYRYLNQTSRSFAAVIQALDGELR 67
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+AVCIFYLVLRALDT+EDD +I DVKVP+L FH +++ EW + ++++ +++ F
Sbjct: 68 HAVCIFYLVLRALDTIEDDMTISLDVKVPMLNEFHSYLHQPEWKYMESKEKHRQVLEDFP 127
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L K YQD I DI +MG GMA+F+ K+V+S ++D YC+YVAGLVG+GLS+L
Sbjct: 128 TISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLVGIGLSRL 187
Query: 184 FYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWPRE+WS+Y KL
Sbjct: 188 FSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLE---GREFWPREVWSRYTKKL 244
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
DL EN D AVQC+N+++TNAL HV D L Y+S L++ ++F FCAIPQ+MAI TLA C
Sbjct: 245 SDLTKPENIDMAVQCMNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAAC 304
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VFRGVVK+R+G ++ NM V Y + + KI DP++ KT +
Sbjct: 305 YNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKTQQII 364
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
+I+ + SG + R HYS
Sbjct: 365 ASIRAMSLPSGPMASRH---HYS 384
>gi|387018808|gb|AFJ51522.1| Squalene synthase-like [Crotalus adamanteus]
Length = 418
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/393 (48%), Positives = 252/393 (64%), Gaps = 19/393 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE-------PHWAFCYSMLHKVSRSFAL 53
M L L HP+++Y L+K KM K + P+ CY L++ SRSFA
Sbjct: 1 MELLKKWLGHPEEIYNLVKFKMGGY---KTVMPKMDQDSLSDSLRICYKYLNQTSRSFAA 57
Query: 54 VIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTK 113
VIQ L DLR+AVCIFYLVLRALDTVEDD +I + K+P+L FH ++Y +W F +
Sbjct: 58 VIQALDGDLRHAVCIFYLVLRALDTVEDDMTISLEAKIPMLHNFHSYLYQPDWKFMDSKE 117
Query: 114 EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVA 173
+ + +++ F +S F L K YQD I DI +MG GMA+F+ K+V S + +D+YC+YVA
Sbjct: 118 KDRQVLEDFPTISLEFRNLAKVYQDVIADICHKMGLGMAEFLEKKVNSNEQWDKYCHYVA 177
Query: 174 GLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG+GLS+LF AS ED + D L+NSMGLFLQKTNIIRDYLED E R FWP+
Sbjct: 178 GLVGIGLSRLFSASELEDPVIGQDVELANSMGLFLQKTNIIRDYLEDQFE---GREFWPK 234
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
E+WSKYV KL DL EN DKAVQC+N+++TNAL HV D L Y+S L++ ++F FCAIPQ
Sbjct: 235 EVWSKYVKKLSDLAKPENIDKAVQCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQ 294
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
+MAI TLA CYNN ++F+GVVK+R+G ++ N+ V Y + + K+ D
Sbjct: 295 VMAIATLAACYNNQQIFKGVVKIRKGQAVTLMMDATNIEAVKTIMYQYMEEIYQKVPSTD 354
Query: 351 PNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
P++ KT V +Q + SG L + HYS
Sbjct: 355 PSSAKTQQIVNTVQSMSLPSGTLVSQ---THYS 384
>gi|168041548|ref|XP_001773253.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675448|gb|EDQ61943.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 320
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 237/367 (64%), Gaps = 54/367 (14%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG + +++HPD++ PL+KLK+ + +A++ IP +P+ AFCY ML +VSRSF++VIQQL T
Sbjct: 1 MGLMETLVKHPDEIRPLVKLKVDAMRAQRAIPKDPYLAFCYRMLMRVSRSFSIVIQQLRT 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYLVLR LDT+EDD +IP D+KVPIL +FH H+YD W F CG K+YK LM+
Sbjct: 61 ELRDAVCVFYLVLRGLDTIEDDMAIPIDIKVPILKSFHEHIYDPSWKFVCGEKDYKELMN 120
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+F VS AFL L +GYQ I ++T RMG GMAKFI EV ++ G+ +
Sbjct: 121 KFECVSNAFLNLDEGYQRVIAEMTNRMGVGMAKFIETEVCAM----------FGICEIPA 170
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
++F WP EIW K+ +L
Sbjct: 171 PRMF-------------------------------------------WPHEIWGKFGTRL 187
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED K EENS+ AV+CLN M+TNAL H DCLKY+ A +D + RFCAIPQIMAIGTLA C
Sbjct: 188 EDFKLEENSENAVRCLNAMITNALTHATDCLKYIEANKDESNLRFCAIPQIMAIGTLAEC 247
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNNI VFRGVVK+RRG+TAKV+ +T ++DVY F+DFS + KI +ND +A+ T +
Sbjct: 248 YNNINVFRGVVKIRRGITAKVM-QTKTISDVYGTFFDFSRKIAEKIGENDDSASATRKHI 306
Query: 361 EAIQKAC 367
E IQ+ C
Sbjct: 307 EDIQEYC 313
>gi|224048923|ref|XP_002186800.1| PREDICTED: squalene synthase [Taeniopygia guttata]
Length = 418
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/383 (49%), Positives = 250/383 (65%), Gaps = 13/383 (3%)
Query: 8 LRHPDDLYPLLKLKMAS-RQAEKQIPPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP+D+Y LL+ KM R ++ + CY L++ SRSFA VIQ L +LR
Sbjct: 8 LGHPEDIYNLLRFKMGGYRTVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQALDGELR 67
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+AVCIFYLVLRALDTVEDD SIP DVKVP+L FH ++Y +W ++ ++ + +++ F
Sbjct: 68 HAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSYLYQPDWKYTESKEKDRQVLEDFP 127
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L K YQD I DI +MG GMA+F+ K+V+S ++D+YC+YVAGLVG+GLS+L
Sbjct: 128 TISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSEREWDKYCHYVAGLVGIGLSRL 187
Query: 184 FYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWPRE+WS+Y KL
Sbjct: 188 FSASELEDSIVGQDTDLANSMGLFLQKTNIIRDYLEDQLE---GREFWPREVWSRYAKKL 244
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
D EN D AVQCLN+++TNAL HV D L Y+S L++ ++F FCAIPQ+MAI TL C
Sbjct: 245 SDFAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLTAC 304
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VFRGVVK+R+G ++ N+ V Y + + KI DP++ KT V
Sbjct: 305 YNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIVYQYVEEIYQKIPSTDPSSNKTQQVV 364
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
+I+ + + R HYS
Sbjct: 365 ASIRAVSLPGSPMASRH---HYS 384
>gi|327281725|ref|XP_003225597.1| PREDICTED: squalene synthase-like [Anolis carolinensis]
Length = 418
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/390 (48%), Positives = 251/390 (64%), Gaps = 13/390 (3%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA----EKQIPPEPHWAFCYSMLHKVSRSFALVIQ 56
M L L HP++LY L+K KM +A +Q CY L++ SRSFA VIQ
Sbjct: 1 MEVLKKWLGHPEELYNLVKFKMGGYKAVMPKMEQDSLSHSLRLCYKYLNQTSRSFAAVIQ 60
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK 116
L +LR+AVCIFYLVLRALDTVEDD +I + KVP+L FH ++Y +W F ++ K
Sbjct: 61 ALDGELRHAVCIFYLVLRALDTVEDDMTINLETKVPMLHNFHSYLYQPDWRFMESNEKDK 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLV 176
+++ F +S F L K Y+D I DI +MG GMA+F+ K+VES ++D+YC+YVAGLV
Sbjct: 121 QVLEDFPTISLEFRNLAKVYRDVIADICHKMGLGMAEFLEKKVESEKEWDKYCHYVAGLV 180
Query: 177 GLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G+GLS+LF AS ED + D+ L+NSMGLFLQKTNIIRDY ED R FWPRE+W
Sbjct: 181 GIGLSQLFSASKLEDPIVGQDTELANSMGLFLQKTNIIRDYYED---QLVGREFWPREVW 237
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKY K+ DL EN DKAV C+N+++TNAL HV D L Y+S L++ ++F FCAIPQ+MA
Sbjct: 238 SKYAKKVSDLAKPENIDKAVHCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMA 297
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNA 353
I TLA CYNN +VFRGVVK+R+G ++ N+ V Y + + KI DP++
Sbjct: 298 IATLAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSS 357
Query: 354 TKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
++T V +++ + G L R HYS
Sbjct: 358 SRTQQIVASVRSMSLPGGELVSR---THYS 384
>gi|74189702|dbj|BAE36836.1| unnamed protein product [Mus musculus]
Length = 416
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/383 (47%), Positives = 246/383 (64%), Gaps = 13/383 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP++ Y LL+ +M R+ Q CY L++ SRSFA VIQ L D+R
Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+A+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F
Sbjct: 67 HAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L + YQ I+DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRNLAEKYQTVIDDICHRMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D +NSMGLFLQKTNIIRDYLED E R FWP+E+W +Y+ KL
Sbjct: 187 FSASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGRYIKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED EN D AVQCLN+++TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI TLA C
Sbjct: 244 EDFAKSENVDVAVQCLNELITNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSKTKQVI 363
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
I+ + + L R HYS
Sbjct: 364 SKIRTQNLPNCQLISR---SHYS 383
>gi|449267315|gb|EMC78277.1| Squalene synthetase, partial [Columba livia]
Length = 394
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 233/347 (67%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L +LR+AVCIFYLVLRALDT+EDD +I DVKVP+L FH
Sbjct: 20 CYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLHEFHS 79
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y EW + ++ + +++ F +S F L K YQD I DI +MG GMA+F+ K+V
Sbjct: 80 FLYQPEWKYMESKEKDRQVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKV 139
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
+S ++D YC+YVAGLVG+GLS+LF AS ED + D+ L+NSMGLFLQKTNIIRDYLE
Sbjct: 140 DSQHEWDRYCHYVAGLVGIGLSRLFSASDLEDPIVGQDTELANSMGLFLQKTNIIRDYLE 199
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWPRE+WS+Y KL DL EN D AVQCLN++VTNAL HV D LKY+S
Sbjct: 200 DQQE---GREFWPREVWSRYAKKLSDLTKPENIDMAVQCLNELVTNALHHVPDVLKYLSR 256
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
L++ ++F FCAIPQ+MAI TLA CYNN +VFRGVVK+R+G ++ N+ V Y
Sbjct: 257 LKNQSVFNFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKSIMY 316
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + KI DP++ KT + +I+ G + R HYS
Sbjct: 317 QYVEEIYQKIPSTDPSSNKTQQVIASIRAMSSPGGPMVSRH---HYS 360
>gi|34328173|ref|NP_034321.2| squalene synthase [Mus musculus]
gi|341940699|sp|P53798.2|FDFT_MOUSE RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|26345014|dbj|BAC36156.1| unnamed protein product [Mus musculus]
gi|32493325|gb|AAH54722.1| Farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
gi|74142018|dbj|BAE41072.1| unnamed protein product [Mus musculus]
gi|74145098|dbj|BAE27418.1| unnamed protein product [Mus musculus]
gi|74177389|dbj|BAE34590.1| unnamed protein product [Mus musculus]
gi|74219800|dbj|BAE40489.1| unnamed protein product [Mus musculus]
gi|148704122|gb|EDL36069.1| farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
gi|187951003|gb|AAI38302.1| Farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
gi|187952867|gb|AAI38303.1| Farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
Length = 416
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/383 (47%), Positives = 246/383 (64%), Gaps = 13/383 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP++ Y LL+ +M R+ Q CY L++ SRSFA VIQ L D+R
Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+A+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F
Sbjct: 67 HAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L + YQ I+DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRNLAEKYQTVIDDICHRMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D +NSMGLFLQKTNIIRDYLED E R FWP+E+W +Y+ KL
Sbjct: 187 FSASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGRYIKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED EN D AVQCLN+++TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI TLA C
Sbjct: 244 EDFAKPENVDVAVQCLNELITNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSKTKQVI 363
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
I+ + + L R HYS
Sbjct: 364 SKIRTQNLPNCQLISR---SHYS 383
>gi|511932|dbj|BAA06102.1| squalene synthase [Mus musculus]
gi|1093943|prf||2105185A squalene synthase
Length = 416
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/383 (46%), Positives = 246/383 (64%), Gaps = 13/383 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP++ Y LL+ +M R+ Q CY L++ SRSFA VIQ L D+R
Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+A+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F
Sbjct: 67 HAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L + YQ I+DI +MG GMA+F+ K+V S D+D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRNLAEKYQTVIDDICHQMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D +NSMGLFLQKTNIIRDYLED E R FWP+E+W +Y+ KL
Sbjct: 187 FSASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGRYIKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED EN D AVQCLN+++TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI TLA C
Sbjct: 244 EDFAKPENVDVAVQCLNELITNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSKTKQVI 363
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
I+ + + L R HYS
Sbjct: 364 SKIRTQNLPNCQLISR---SHYS 383
>gi|9506591|ref|NP_062111.1| squalene synthase [Rattus norvegicus]
gi|399484|sp|Q02769.1|FDFT_RAT RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|207071|gb|AAA42179.1| squalene synthetase [Rattus norvegicus]
gi|51858605|gb|AAH81810.1| Farnesyl diphosphate farnesyl transferase 1 [Rattus norvegicus]
gi|149030261|gb|EDL85317.1| farnesyl diphosphate farnesyl transferase 1 [Rattus norvegicus]
Length = 416
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 249/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M R+ IP + CY L + SRSFA VIQ L D
Sbjct: 7 LGHPEEFYNLLRFRMGGRR--NFIPKMDRNSLSNSLKTCYKYLDQTSRSFAAVIQALDGD 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVC+FYL+LRA+DTVEDD +I + K+P+L FH +Y+ EW F+ ++++V+++
Sbjct: 65 IRHAVCVFYLILRAMDTVEDDMAISVEKKIPLLRNFHTFLYEPEWRFTESKEKHRVVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+W KYV
Sbjct: 185 RLFSASEFEDPIVGEDTECANSMGLFLQKTNIIRDYLEDQQE---GRQFWPQEVWGKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KLED EN D AV+CLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLEDFVKPENVDVAVKCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + ++ +DP+A+K
Sbjct: 302 ACYNNHQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRVPNSDPSASKAKQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 LISNIRTQSLPNCQLISR---SHYS 383
>gi|6002565|gb|AAF00038.1| squalene synthase [Mus musculus]
Length = 368
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 239/364 (65%), Gaps = 10/364 (2%)
Query: 8 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP++ Y LL+ +M R+ Q CY L++ SRSFA VIQ L D+R
Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+A+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F
Sbjct: 67 HAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L + YQ I+DI +MG GMA+F+ K+V S D+D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRNLAEKYQTVIDDICHQMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D +NSMGLFLQKTNIIRDYLED E R FWP+E+W +Y+ KL
Sbjct: 187 FSASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGRYIKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED EN D AVQCLN+++TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI TLA C
Sbjct: 244 EDFAKPENVDVAVQCLNELITNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSKTKQVI 363
Query: 361 EAIQ 364
I+
Sbjct: 364 SKIR 367
>gi|348587352|ref|XP_003479432.1| PREDICTED: squalene synthase-like [Cavia porcellus]
Length = 417
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 250/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M + K +P A CY L++ SRSFA+VIQ L D
Sbjct: 7 LGHPEEFYNLLRFRMGGKW--KVMPKMDQDALSSSMKTCYKYLNQTSRSFAVVIQALDGD 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
LR+AVC+FYLVLRALDT+EDD +I + KVP+L +FH +YD +W ++ +++ +++
Sbjct: 65 LRHAVCVFYLVLRALDTLEDDMTICLEKKVPLLQSFHTFLYDPDWRYTESKDKHRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRSLAEKYQTVIVDICQKMGNGMAEFLVKNVTSKQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ L+NS+GLFLQKTNIIRDYLED E R FWP+E+W +YV
Sbjct: 185 RLFSASEFEDPVVGEDTALANSLGLFLQKTNIIRDYLEDQQE---GREFWPQEVWGRYVR 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL DL EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA
Sbjct: 242 KLADLAKPENIDVAVQCLNELITNTLHHIPDIITYLSRLRNQSIFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VFRGVVK+RRG ++ NNM V + + + +I +DP++ KT
Sbjct: 302 ACYNNQQVFRGVVKIRRGQAVTLMMDANNMPAVKAMIFQYMEEIYHRIPSSDPSSEKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ S L R HYS
Sbjct: 362 IISTIRMQNFPSCQLVARS---HYS 383
>gi|395507319|ref|XP_003757973.1| PREDICTED: squalene synthase [Sarcophilus harrisii]
Length = 473
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 236/347 (68%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L +LRNAVCIFYLVLRALDTVEDD +I + KVP+L FH
Sbjct: 99 CYKYLNQTSRSFAAVIQALDNELRNAVCIFYLVLRALDTVEDDMTISMEKKVPLLQNFHS 158
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
++Y +W + ++ + +++ F VS F L + YQ I DI ++MG GMA+F+ K+V
Sbjct: 159 YLYQPDWRYMESNQKDRQVLEDFSTVSLEFRNLAESYQVVINDICQKMGHGMAEFLEKKV 218
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S+ ++++YC+YVAGLVG+GLS+LF AS ED + DS L+NSMGLFLQKTNIIRDYLE
Sbjct: 219 NSVQEWEKYCHYVAGLVGIGLSRLFSASELEDPIVGQDSKLANSMGLFLQKTNIIRDYLE 278
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
DI E R FWP+E+WS+Y KL DL EN D AV CLN+++TNAL H+ D L Y+S
Sbjct: 279 DIME---GREFWPQEVWSRYAKKLSDLAKPENIDLAVHCLNELITNALQHIPDVLTYLSQ 335
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VFRG VK+R+G ++ NM V Y
Sbjct: 336 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFRGRVKIRKGQAVTLMMEATNMPAVKAIMY 395
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I +DP+++KT + +++K + S L R HYS
Sbjct: 396 QYMEEIYQRIPSSDPSSSKTKQIISSVRKQNLPSCQLVSRN---HYS 439
>gi|354471592|ref|XP_003498025.1| PREDICTED: squalene synthase [Cricetulus griseus]
gi|344254253|gb|EGW10357.1| Squalene synthetase [Cricetulus griseus]
Length = 417
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/383 (46%), Positives = 246/383 (64%), Gaps = 13/383 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP++ Y LL+ +M R+ Q CY L++ SRSFA VIQ L ++R
Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFITKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEIR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+AVC+FYLVLRALDTVEDD SI + K+P+L FH +Y+ EW F+ T++ + +++ F
Sbjct: 67 HAVCVFYLVLRALDTVEDDMSISVEKKIPMLRNFHTFLYEPEWRFTESTQKDRQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L + YQ I DI ++MG GMA+F+ K V S D+D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRNLAEKYQTVIADICQKMGCGMAEFVDKHVTSKQDWDKYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F S ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+W +YV KL
Sbjct: 187 FSTSEFEDPLVGEDTECANSMGLFLQKTNIIRDYLEDQQE---GRAFWPQEVWGRYVKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
ED EN D AVQCLN+++TN L H+ + Y+S LR+ ++F FCAIPQ+MAI TLA C
Sbjct: 244 EDFAKPENIDVAVQCLNELITNTLHHIPHVITYLSRLRNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ NM V + + + +I +DP+++KT +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYIEEIHHRIPSSDPSSSKTKEVI 363
Query: 361 EAIQKACMDSGVLNKRFKILHYS 383
AI+ + + L R HYS
Sbjct: 364 SAIRTQSLPNCQLISR---SHYS 383
>gi|348524909|ref|XP_003449965.1| PREDICTED: squalene synthase-like [Oreochromis niloticus]
Length = 419
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/380 (47%), Positives = 247/380 (65%), Gaps = 17/380 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWA-------FCYSMLHKVSRSFALVIQQLGT 60
L HP++++ L K KM +A + P+ + CY L++ SRSFA VIQ L
Sbjct: 7 LGHPEEIFNLFKFKMGGCRA---VMPKLDYESMTESLRTCYLYLNQTSRSFAAVIQALDG 63
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDD +IP D KVP+L FH +Y EW F+ ++ + +++
Sbjct: 64 ELRHAVCIFYLVLRALDTVEDDMTIPLDKKVPMLNDFHTFLYQDEWCFTESQEKDRQVLE 123
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
F +S F L + Y+D I DI RMG GMA+F+ K+V S+ ++D+YC+YVAGLVG+GL
Sbjct: 124 DFPTISLEFRNLAQEYRDVISDICHRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGL 183
Query: 181 SKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWPRE WS++
Sbjct: 184 SRLFSASQLEDPEVGRDTELANSMGLFLQKTNIIRDYLEDTQE---GRAFWPREAWSQFA 240
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+LEDL E + A+ CLN +VT+AL HV D + Y+S LR+ ++F FCAIPQ+MAI TL
Sbjct: 241 GRLEDLAQPEKLESALSCLNLLVTDALHHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATL 300
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
+ CYNN VF+GVVK+R+G ++ NM+ V +S + K++ DP+ KTL
Sbjct: 301 STCYNNPMVFQGVVKIRKGQAVTLMMEATNMSAVQTIIAQYSQEILHKVSLTDPSREKTL 360
Query: 358 SRVEAI-QKACMDSGVLNKR 376
+ I +K+ + L R
Sbjct: 361 HILAVIREKSALSQSSLRSR 380
>gi|296221611|ref|XP_002756812.1| PREDICTED: squalene synthase isoform 2 [Callithrix jacchus]
Length = 417
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 249/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY+ L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYTYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F+ ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN + AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIELAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VFRGVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFRGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|321267598|ref|NP_001189454.1| squalene synthase [Danio rerio]
Length = 418
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/379 (46%), Positives = 253/379 (66%), Gaps = 16/379 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHW-------AFCYSMLHKVSRSFALVIQQLGT 60
L HP+++ L + K+ +A + P+ + CY+ L++ SRSFA VIQ L
Sbjct: 7 LGHPEEIINLFRYKLGGCRA---VMPKLDYDSMSDTLRTCYAYLNQTSRSFAAVIQALDG 63
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDD SIP + K+P+L FH +Y EW FS ++ + +++
Sbjct: 64 ELRHAVCIFYLVLRALDTVEDDMSIPLEQKLPLLQDFHTFLYQPEWSFSQSREKDRRVLE 123
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
F +S F LG+ Y++ I DI RMG GMA+F+ K+V S+ ++D+YC+YVAGLVG+GL
Sbjct: 124 DFPTISVEFRNLGQEYREVISDICHRMGVGMAEFLEKKVSSMKEWDKYCHYVAGLVGIGL 183
Query: 181 SKLFYASGTE--DLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF AS E ++ D+ L+NSMGLFLQKTNIIRDYLED + R FWP E WS+Y
Sbjct: 184 SRLFSASQLEEPEVGRDTELANSMGLFLQKTNIIRDYLEDQQQ---GRAFWPEEAWSQYA 240
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+ LEDL ++ A+ CLN +VT+AL HV D + Y+S LR+ ++F FCAIPQ+MAI TL
Sbjct: 241 SGLEDLAQPQHLSSALSCLNLLVTDALRHVPDVMLYLSRLRNQSVFNFCAIPQVMAIATL 300
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
+ CYNN +VF+GVVK+R+G ++ + NM+ VY +S+ + K++ +DP+ KTL
Sbjct: 301 SACYNNPQVFQGVVKIRKGQAVTLMMQATNMSAVYSIITQYSHEILQKVSISDPSREKTL 360
Query: 358 SRVEAIQKACMDSGVLNKR 376
+ I++ + G ++ R
Sbjct: 361 QILSVIREKSVHEGCVSSR 379
>gi|306966156|ref|NP_001135642.2| farnesyl-diphosphate farnesyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 416
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/377 (47%), Positives = 249/377 (66%), Gaps = 11/377 (2%)
Query: 8 LRHPDDLYPLLKLKM-ASRQAEKQIPPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP+++Y L++ KM A R + ++ P+ CY L++ SRSFA VIQ L +LR
Sbjct: 7 LGHPEEIYNLVRFKMGACRTVQPRLDPDSMSESLQTCYRYLNETSRSFAAVIQALDGELR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+AVCIFYLVLRALDTVEDD +I + K+P+L FH ++Y +W + ++ K +++ F
Sbjct: 67 HAVCIFYLVLRALDTVEDDMTIALETKIPMLHDFHTYLYQEDWRYMHSKEKDKQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F +L YQ+ I DI RMG GMA+++ K+VE++ ++D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRKLAVIYQEVIADICHRMGVGMAEYLEKKVETLQEWDQYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D+ LSNSMGLFLQKTNIIRDYLED E R FWP+E+W KY KL
Sbjct: 187 FSASELEDPIVGLDTKLSNSMGLFLQKTNIIRDYLEDQME---GREFWPKEVWGKYGKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
DL E AV C+N+++TNAL HV D L Y+S L++ ++F FCAIPQ+MAI TLA C
Sbjct: 244 SDLANPERIVPAVHCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ N+ V Y + + KI DP++ +T +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTMMMDATNIEAVRAIMYQYVEEIYQKIPLTDPSSGRTQHII 363
Query: 361 EAIQKACM-DSGVLNKR 376
+I+ + DSG L R
Sbjct: 364 VSIRNLSLSDSGSLASR 380
>gi|403307503|ref|XP_003944232.1| PREDICTED: squalene synthase isoform 1 [Saimiri boliviensis
boliviensis]
Length = 417
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 248/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F+ ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHTFLYQPDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|196008639|ref|XP_002114185.1| hypothetical protein TRIADDRAFT_27912 [Trichoplax adhaerens]
gi|190583204|gb|EDV23275.1| hypothetical protein TRIADDRAFT_27912 [Trichoplax adhaerens]
Length = 408
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/367 (46%), Positives = 238/367 (64%), Gaps = 10/367 (2%)
Query: 4 LAAVLRHPDDLYPLLKLK---MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
L + P + L++ + M + Q + P CY L SRSFA VIQ L
Sbjct: 3 LVKSITRPSEFLALIQFQFGAMKTVQIQDWTKLSPTLKRCYQFLVMTSRSFASVIQALDG 62
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+A+CIFYLVLRALDT+EDD +IP + K ++ H ++Y+ EW + + K++++
Sbjct: 63 ELRDAICIFYLVLRALDTLEDDMTIPVEEKTALMKELHENLYNPEWKYRRSQEVDKIVLE 122
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-CKEVESIDDYDEYCYYVAGLVGLG 179
+F +S F L K Y+D I++ITKRM GM K++ C +V S +D++EYC+YVAGLVG+G
Sbjct: 123 EFPVISAEFRNLDKSYRDVIQEITKRMADGMCKYLDCADVNSFEDWNEYCHYVAGLVGIG 182
Query: 180 LSKLFYASGTEDL---APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
LS++F AS ED + LSNSMGLFLQKTNIIRDYL DI E R FWP+E WSK+
Sbjct: 183 LSRIFSASKLEDEIVGEDEPLSNSMGLFLQKTNIIRDYLADIQE---GRKFWPKEAWSKF 239
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
+LED + N D+AV+CLN ++TNAL HV D +KY+S LR+ ++F FCAIPQ+MAIGT
Sbjct: 240 AKRLEDFQDASNRDEAVRCLNFLITNALHHVPDAIKYLSRLRNQSVFNFCAIPQVMAIGT 299
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKT 356
LA+CYNN +VF VVK+R+G ++ R ++ + F+DF+ + KNDP KT
Sbjct: 300 LAVCYNNPDVFTTVVKLRKGQAVYMMKRAVSLNAAKIIFHDFAAEIAKIAPKNDPTKDKT 359
Query: 357 LSRVEAI 363
L E I
Sbjct: 360 LQICETI 366
>gi|320170185|gb|EFW47084.1| farnesyl-diphosphate farnesyltransferase 1 [Capsaspora owczarzaki
ATCC 30864]
Length = 418
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/372 (48%), Positives = 243/372 (65%), Gaps = 18/372 (4%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQ 57
+A+++ HPD+L+ L K K Q + +P A CY +L SRSFA VIQ
Sbjct: 1 MASLILHPDELWALCKFKFLGGQ-QAIMPKNDLSALPESMQKCYRLLEATSRSFAAVIQA 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC-GTKEY- 115
L +LR A+CIFYLVLR LDT+EDD ++ +VKVP+L+ FH +Y W F+ G E
Sbjct: 60 LDGELRPAICIFYLVLRGLDTIEDDMTLANEVKVPLLVDFHEIIYKTGWTFNGNGPDEAD 119
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGL 175
+ L+ F V FL+L YQ+ I DITKRMG GM+KF+ +V + DDY+EYC+YVAGL
Sbjct: 120 RHLLVDFDVVIAEFLKLRPAYQEVIADITKRMGLGMSKFLGAQVHTKDDYNEYCHYVAGL 179
Query: 176 VGLGLSKLFYASGTEDLA---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG+GLSK+F ASG E A + LSNSMGLFLQKTNIIRDYLEDI + R+FWPR +
Sbjct: 180 VGIGLSKIFAASGLESEAVGTSEHLSNSMGLFLQKTNIIRDYLEDIID---GRIFWPRAV 236
Query: 233 WSKYV--NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
W KY KL+D + EN A+ CLND+VT+AL H+ D YMS+LR+ ++F FCAIPQ
Sbjct: 237 WIKYAPNGKLDDFRAPENKAAALACLNDLVTDALAHIPDVFAYMSSLRNQSVFNFCAIPQ 296
Query: 291 IMAIGTLALCYNNIEVF-RGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
+MAI TLAL Y+N +VF R VK+R+ L K++ NM ++Y F +F L+ ++
Sbjct: 297 VMAIATLALVYDNHQVFTRTGVKIRKALAVKLMMGATNMPNLYAIFGEFLANLESRVRTE 356
Query: 350 DPNATKTLSRVE 361
DP+ T++ +E
Sbjct: 357 DPSYEATVAAIE 368
>gi|197245548|gb|AAI68496.1| Unknown (protein for MGC:173117) [Xenopus (Silurana) tropicalis]
Length = 416
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 177/377 (46%), Positives = 249/377 (66%), Gaps = 11/377 (2%)
Query: 8 LRHPDDLYPLLKLKM-ASRQAEKQIPPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP+++Y L++ KM A R + ++ P+ CY L++ SRSFA VIQ L +LR
Sbjct: 7 LGHPEEIYNLVRFKMGACRTVQPRLDPDSMSESLQTCYRYLNETSRSFAAVIQALDGELR 66
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+AVCIFYLVLRALDTVEDD +I + K+P+L FH ++Y +W + ++ K +++ F
Sbjct: 67 HAVCIFYLVLRALDTVEDDMTIALETKIPMLHDFHTYLYQEDWRYMHSKEKDKQVLEDFP 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F +L YQ+ I DI RMG GMA+++ K+VE++ ++D+YC+YVAGLVG+GLS+L
Sbjct: 127 TISLEFRKLAVIYQEVIADICHRMGVGMAEYLEKKVETLQEWDQYCHYVAGLVGIGLSRL 186
Query: 184 FYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F AS ED + D+ LSNSMGLFLQKTNIIRDYLED E R FWP+E+W KY KL
Sbjct: 187 FSASELEDPIVGLDTKLSNSMGLFLQKTNIIRDYLEDQME---GREFWPKEVWGKYGKKL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
DL E AV C+N+++TNAL HV D L Y+S L++ ++F FCAIPQ+MAI TLA C
Sbjct: 244 SDLANPERIVPAVHCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+GVVK+R+G ++ N+ V Y + + KI DP++ +T +
Sbjct: 304 YNNQQVFKGVVKIRKGQAVTMMMDATNIEAVRAIMYQYVEEIYQKIPLTDPSSGRTQHII 363
Query: 361 EAIQKACM-DSGVLNKR 376
+I+ + +SG L R
Sbjct: 364 VSIRNLSLSNSGSLASR 380
>gi|426220595|ref|XP_004004500.1| PREDICTED: squalene synthase [Ovis aries]
Length = 417
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/385 (47%), Positives = 248/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M R+ K IP CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F+ ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSKYV
Sbjct: 185 RLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDFAVQCLNELITNALHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TKT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPTSDPCSTKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLVSRS---HYS 383
>gi|330791198|ref|XP_003283681.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium purpureum]
gi|325086424|gb|EGC39814.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium purpureum]
Length = 411
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/371 (47%), Positives = 244/371 (65%), Gaps = 12/371 (3%)
Query: 8 LRHPDDLYPLLKLKMA-SRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HPD+ + LLK+ S + ++Q+ + +CY +L+K SRSFA VI +L +L++A
Sbjct: 4 LAHPDEFFSLLKIGYTESFKPKEQLKDNLTNKEWCYELLNKTSRSFAFVINELEVNLKDA 63
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH-FSCG-TKEYKVLMDQFH 123
+CIFYLVLR LDT+EDDT++ K+P++ F +Y + F G + K L+ F
Sbjct: 64 ICIFYLVLRGLDTIEDDTTVEIKTKLPVMTQFSEGLYQPGFKVFGYGMNNDEKNLVQNFD 123
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
V FL LG Y I DIT+RM GM++F+ K+V ++ ++D YC+YVAGLVG+GLS++
Sbjct: 124 KVVDVFLSLGDSYCTIIHDITRRMANGMSEFLQKQVVTLPEWDLYCHYVAGLVGIGLSRI 183
Query: 184 FYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F+ASG E D SN MGLFLQKTNIIRDYLEDINE R+FWPR++WS+Y L
Sbjct: 184 FHASGLESEWFATADEESNQMGLFLQKTNIIRDYLEDINE---NRIFWPRDVWSRYTLNL 240
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+ K + A+ CLND++TNAL H L YMS L++ + FCAIPQ+MAIGTL C
Sbjct: 241 ENFKDPKYQISALHCLNDLITNALSHAVVALDYMSRLKNDKVINFCAIPQVMAIGTLNAC 300
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNN--MTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
YNN VF GVVK+R+G A ++D N +T Y F+ F+N ++ K+ NDP+A KT+
Sbjct: 301 YNNYNVFTGVVKIRKGQRALIVDAIQNKGITGTYELFFKFANEMQQKVPLNDPSANKTIQ 360
Query: 359 RVEAIQKACMD 369
+E+IQK C++
Sbjct: 361 HLESIQKLCVE 371
>gi|281206584|gb|EFA80770.1| farnesyl-diphosphate farnesyltransferase [Polysphondylium pallidum
PN500]
Length = 428
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 245/383 (63%), Gaps = 24/383 (6%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L PD+LY LLK+ + K + E + +CY +L+K SRSFA VI +L L++A
Sbjct: 7 LSRPDELYSLLKIGYTEKFKPKNVIKEDLENKQWCYELLNKTSRSFAFVINELDPHLKDA 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH-FSCG-TKEYKVLMDQFH 123
+C+FYLVLR LDTVEDDT++ + K+P+L F +Y + F G + K+L++ F
Sbjct: 67 ICVFYLVLRGLDTVEDDTTVSLETKLPVLTKFAEGLYQPGFKVFGYGMNNDEKMLVENFD 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
V +L LG + I DITKRM GM++F+ KEV ++ ++D YC+YVAGLVG+GLSK+
Sbjct: 127 KVVDVYLSLGDRFCPIIHDITKRMAHGMSEFLQKEVVTLPEWDLYCHYVAGLVGIGLSKI 186
Query: 184 FYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F ASG E D SN MGLFLQKTNIIRDYLEDINE R+FWPREIWSKY KL
Sbjct: 187 FAASGLESEWFANADKESNDMGLFLQKTNIIRDYLEDINE---SRIFWPREIWSKYTAKL 243
Query: 241 EDLKYEENSDK------------AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAI 288
++ K +++ A+ CLND++TNAL H L YMS LR+ + FCAI
Sbjct: 244 DNFKNIQHAQSVSLMLIVTMIVIALNCLNDLITNALSHAIVSLDYMSRLRNPKVIGFCAI 303
Query: 289 PQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN--MTDVYLAFYDFSNILKPKI 346
PQ+MAIGTL+ CYNN VF GVVK+R+G A ++D N +T Y FY F+N + K+
Sbjct: 304 PQVMAIGTLSACYNNHGVFTGVVKIRKGQRALIVDTIQNKGITGTYELFYKFANEMVLKV 363
Query: 347 NKNDPNATKTLSRVEAIQKACMD 369
+DPNA KTL ++ IQK C++
Sbjct: 364 PASDPNAKKTLEHLDTIQKMCVE 386
>gi|291385794|ref|XP_002709483.1| PREDICTED: squalene synthase [Oryctolagus cuniculus]
Length = 417
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 247/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ ++ R+ K IP CY L++ SRSFA VI+ L +
Sbjct: 7 LSHPEEFYNLLRFRLGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + K+P+L FH +Y+ +W F ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISVEKKIPLLHNFHSFLYEPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQKVIADICRRMGMGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDIERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP++ KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISR---SHYS 383
>gi|332244654|ref|XP_003271489.1| PREDICTED: squalene synthase isoform 1 [Nomascus leucogenys]
Length = 417
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 246/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGTGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFTKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|61316445|ref|NP_001013022.1| squalene synthase [Bos taurus]
gi|50841455|tpe|CAE48363.1| TPA: FDFT1 protein [Bos taurus]
gi|296484951|tpg|DAA27066.1| TPA: squalene synthetase [Bos taurus]
Length = 417
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 247/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M R+ K IP CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F+ ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSKYV
Sbjct: 185 RLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TKT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLVSRS---HYS 383
>gi|66801783|ref|XP_629811.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium discoideum
AX4]
gi|74851174|sp|Q54DR1.1|FDFT_DICDI RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|60463199|gb|EAL61392.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium discoideum
AX4]
Length = 416
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/371 (47%), Positives = 242/371 (65%), Gaps = 12/371 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HPD+ LLK+ K E + +CY +L+K SRSFA VI +L L++A
Sbjct: 7 LAHPDEFLSLLKIGYTESFKPKSQLKENLGNKEWCYELLNKTSRSFAFVINELEPSLKDA 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH-FSCG-TKEYKVLMDQFH 123
+CIFYLVLR LDT+EDDT++ + K+P+L +F +Y + F G + K L++ F
Sbjct: 67 ICIFYLVLRGLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKNLVENFD 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
V FL LG GY I DIT+RM GM++F+ K V ++ ++D YC+YVAGLVG+GLSK+
Sbjct: 127 KVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGIGLSKI 186
Query: 184 FYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F+ASG E D SN MGLFLQKTNIIRDYLEDINE R+FWPR++W++Y L
Sbjct: 187 FHASGLESEWFATADDESNQMGLFLQKTNIIRDYLEDINE---KRIFWPRDVWARYTLHL 243
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
E+ K + A+ CLND++TNAL H L YMS L++ + FCAIPQ+MAIGTL C
Sbjct: 244 ENFKEAKYQIPALHCLNDLITNALSHALIALDYMSRLKNPQVINFCAIPQVMAIGTLNAC 303
Query: 301 YNNIEVFRGVVKMRRGLTAKVID--RTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
YNN VF GVVK+R+G A ++D ++ +T Y F+ F+N ++ K+ NDP+A KT+
Sbjct: 304 YNNYNVFTGVVKIRKGQRALIVDAIQSKGLTATYELFFKFANEMRHKVPPNDPSAKKTIQ 363
Query: 359 RVEAIQKACMD 369
+E+I+K C++
Sbjct: 364 HLESIEKLCIE 374
>gi|326916763|ref|XP_003204674.1| PREDICTED: squalene synthase-like [Meleagris gallopavo]
Length = 357
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/325 (52%), Positives = 222/325 (68%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
LR+AVCIFYLVLRALDT+EDD +I DVKVP+LI FH ++Y EW + ++++ +++
Sbjct: 5 LRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLIEFHSYLYQPEWKYMESKEKHRQVLED 64
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L K YQD I DI +MG GMA+F+ K+V+S ++D YC+YVAGLVG+GLS
Sbjct: 65 FPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLVGIGLS 124
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWPRE+WS+Y
Sbjct: 125 RLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLE---GREFWPREVWSRYTK 181
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL DL EN D AVQCLN+++TNAL HV D L Y+S L++ ++F FCAIPQ+MAI TLA
Sbjct: 182 KLSDLTKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLA 241
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VFRGVVK+R+G ++ NM V Y + + KI DP++ KT
Sbjct: 242 ACYNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKTQQ 301
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ +I+ + SG + R HYS
Sbjct: 302 IIASIRALSLPSGPMASRH---HYS 323
>gi|122138639|sp|Q32KR6.1|FDFT_BOVIN RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|81674847|gb|AAI09960.1| Farnesyl-diphosphate farnesyltransferase 1 [Bos taurus]
Length = 417
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 247/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M R+ K IP CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F+ ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSKYV
Sbjct: 185 RLFPASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TKT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLVSRS---HYS 383
>gi|126303285|ref|XP_001372440.1| PREDICTED: squalene synthase [Monodelphis domestica]
Length = 417
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/386 (46%), Positives = 244/386 (63%), Gaps = 17/386 (4%)
Query: 7 VLRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGT 60
+L HP++LY LL KM A K IP C+ L++ SRSFA VIQ L +
Sbjct: 6 LLGHPEELYNLLWYKMGG--ARKVIPKLDQDTLSDGLKTCFKYLNQTSRSFAAVIQALDS 63
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LRNAVCIFYLVLRALDTVEDD +I + KV +L FH ++Y +W + ++ + +++
Sbjct: 64 GLRNAVCIFYLVLRALDTVEDDMTISMEKKVTMLKNFHSYLYQPDWSYMESNEKDRQVLE 123
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
F VS F L + YQ I +I ++MG GMA+F+ K V SI ++D YC+YVAGLVG+GL
Sbjct: 124 DFSTVSLEFRNLEESYQVVIHEICQKMGNGMAEFLEKNVNSIQEWDMYCHYVAGLVGIGL 183
Query: 181 SKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
+LF AS ED + D L+NSMGLFLQKTNIIRDYLED E R FWP+E+WS+Y
Sbjct: 184 CRLFLASDLEDPIIGKDLELANSMGLFLQKTNIIRDYLEDTME---GREFWPQEVWSRYA 240
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
KL D EN D AV CLN+++TNAL H+ D L ++S LR+ ++F FCAIPQ+MAI TL
Sbjct: 241 KKLSDFTKPENIDLAVHCLNELITNALQHIPDILTFLSRLRNQSVFNFCAIPQVMAIATL 300
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
A CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 301 AACYNNQQVFKGKVKIRKGQAVTLMMEATNMPAVKAIMYQYMEEIYQRIPNSDPSSSKTK 360
Query: 358 SRVEAIQKACMDSGVLNKRFKILHYS 383
+ +++K S L R HYS
Sbjct: 361 QIISSVRKQNFPSCQLVSRN---HYS 383
>gi|395842323|ref|XP_003793967.1| PREDICTED: squalene synthase isoform 1 [Otolemur garnettii]
Length = 417
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 247/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ ++ ++ K +P CY L++ SRSFA VI+ L +
Sbjct: 7 LGHPEEFYNLLRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y+ +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYEPDWRFMDSKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+W +YV
Sbjct: 185 RLFSASEFEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWGRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRAQNLPTCQLISRS---HYS 383
>gi|386781654|ref|NP_001247653.1| squalene synthase [Macaca mulatta]
gi|402877483|ref|XP_003902455.1| PREDICTED: squalene synthase isoform 1 [Papio anubis]
gi|355697727|gb|EHH28275.1| Squalene synthase [Macaca mulatta]
gi|380788429|gb|AFE66090.1| squalene synthase [Macaca mulatta]
gi|383416581|gb|AFH31504.1| squalene synthase [Macaca mulatta]
gi|384945848|gb|AFI36529.1| squalene synthase [Macaca mulatta]
Length = 417
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 246/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|428181682|gb|EKX50545.1| farnesyl-diphosphate farnesyltransferase [Guillardia theta
CCMP2712]
Length = 557
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 182/384 (47%), Positives = 249/384 (64%), Gaps = 24/384 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEK---QIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L+ +LR P + L+KLK + +K Q + W FCY ML KVSRSFA+VIQQ
Sbjct: 1 MGVLSLLLR-PSEFTALIKLKRKISKWKKRASQQKRDADWLFCYDMLDKVSRSFAIVIQQ 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKV 117
LG +LRNAVCIFYLVLR LDT+EDD +I + K +L F++ + D ++ SCG K+ K+
Sbjct: 60 LGDELRNAVCIFYLVLRGLDTIEDDMAIDKETKTKLLSTFYQKLTDEKYCLSCGYKDEKI 119
Query: 118 LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG 177
L++ F HV+ + L YQ+ I DITK+M GM KF +V + DYD YC+YVAGLVG
Sbjct: 120 LVENFFHVTRGYNTLKPQYQEIICDITKKMAEGMEKFTKMKVVTTKDYDLYCHYVAGLVG 179
Query: 178 LGLSKLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEI-PKC---RMFWPR 230
+GLS LF ASG ED + ++L +N MGLFLQKTNIIRD+LED ++ P+ R+FWP+
Sbjct: 180 IGLSGLFAASGLEDPMVGENLETANHMGLFLQKTNIIRDFLEDHEDVNPETGDRRVFWPK 239
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
+IW KY + L + + +N AV CLNDMVTNAL H+ C++Y+S + D + F FCAIPQ
Sbjct: 240 DIWGKYTDDLANFTFGKNETLAVACLNDMVTNALQHLPYCVEYLSTISDESNFLFCAIPQ 299
Query: 291 IMAIGTLALCYNNIEVFRG-------------VVKMRRGLTAKVIDRTNNMTDVYLAFYD 337
+MA TL+LCY N +VF+G VK+R+GL+AK++ T +M V F D
Sbjct: 300 VMAAHTLSLCYANPDVFKGEIRKELGECRNTKPVKLRKGLSAKLMLDTVDMASVLDIFED 359
Query: 338 FSNILKPKINKNDPNATKTLSRVE 361
+ +I DP+A T++ V+
Sbjct: 360 TIESIADRIAPTDPSAKSTMAMVQ 383
>gi|296205388|ref|XP_002749744.1| PREDICTED: squalene synthase-like isoform 1 [Callithrix jacchus]
Length = 417
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/365 (46%), Positives = 239/365 (65%), Gaps = 14/365 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P C++ L++ SRSFA V Q L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCFTYLNQTSRSFAAVSQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F+ ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLYNFHSFLYQTDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQMVIADICRRMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 185 SLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN + AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIELAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VFRGVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFRGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAI 363
+ I
Sbjct: 362 IISTI 366
>gi|426358843|ref|XP_004046700.1| PREDICTED: squalene synthase isoform 1 [Gorilla gorilla gorilla]
Length = 417
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|431918314|gb|ELK17541.1| Squalene synthetase [Pteropus alecto]
Length = 418
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/372 (47%), Positives = 239/372 (64%), Gaps = 14/372 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M K IP CY L + SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLLRFQMGGWY--KVIPKMDQDSLSSSLKTCYKYLRQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I +VKVP+L FH ++Y+ W F + + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTINLEVKVPMLQNFHSYLYEPNWCFMESKERDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI ++MG GMA+F+ K+V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISFEFRNLAEKYQTVIADICRKMGCGMAEFLVKQVTSEQEWDQYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+EIWSKYV
Sbjct: 185 RLFSASELEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEIWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++T+AL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLSDFTKPENIDLAVQCLNELITSALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V + + + +I +D ++ KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYIEEIYHRIPDSDSSSDKTRQ 361
Query: 359 RVEAIQKACMDS 370
+ I+ + S
Sbjct: 362 IISTIRTQKLPS 373
>gi|301776579|ref|XP_002923714.1| PREDICTED: squalene synthase-like [Ailuropoda melanoleuca]
gi|281347693|gb|EFB23277.1| hypothetical protein PANDA_012895 [Ailuropoda melanoleuca]
Length = 417
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 247/385 (64%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L P++ Y LL+ +M R+ K IP CY L++ SRSFA VI+ L +
Sbjct: 7 LGRPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W + ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+WSKYV
Sbjct: 185 RLFSASELEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D +N D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP++ KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|67089147|ref|NP_004453.3| squalene synthase [Homo sapiens]
gi|197098646|ref|NP_001126476.1| squalene synthase [Pongo abelii]
gi|114623526|ref|XP_001141492.1| PREDICTED: squalene synthase isoform 13 [Pan troglodytes]
gi|397467302|ref|XP_003805363.1| PREDICTED: squalene synthase isoform 1 [Pan paniscus]
gi|585126|sp|P37268.1|FDFT_HUMAN RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|75054824|sp|Q5R6U3.1|FDFT_PONAB RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|292510|gb|AAA60582.1| squalene synthetase [Homo sapiens]
gi|307432|gb|AAA36645.1| squalene synthetase [Homo sapiens]
gi|13097747|gb|AAH03573.1| Farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
gi|20988196|gb|AAH29641.1| Farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
gi|30582247|gb|AAP35350.1| farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
gi|48146183|emb|CAG33314.1| FDFT1 [Homo sapiens]
gi|55731622|emb|CAH92517.1| hypothetical protein [Pongo abelii]
gi|60655561|gb|AAX32344.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
gi|119586032|gb|EAW65628.1| farnesyl-diphosphate farnesyltransferase 1, isoform CRA_a [Homo
sapiens]
gi|119586033|gb|EAW65629.1| farnesyl-diphosphate farnesyltransferase 1, isoform CRA_a [Homo
sapiens]
gi|123979588|gb|ABM81623.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
gi|123994413|gb|ABM84808.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
gi|261861550|dbj|BAI47297.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
gi|410223942|gb|JAA09190.1| farnesyl-diphosphate farnesyltransferase 1 [Pan troglodytes]
gi|410257332|gb|JAA16633.1| farnesyl-diphosphate farnesyltransferase 1 [Pan troglodytes]
gi|410307070|gb|JAA32135.1| farnesyl-diphosphate farnesyltransferase 1 [Pan troglodytes]
gi|410354375|gb|JAA43791.1| farnesyl-diphosphate farnesyltransferase 1 [Pan troglodytes]
Length = 417
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|435677|emb|CAA48896.1| farnesyl-diphosphate farnesyltransferase [Homo sapiens]
gi|739994|prf||2004281A squalene synthase
Length = 417
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|14328083|gb|AAH09251.1| Farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
Length = 417
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYRYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|30584837|gb|AAP36671.1| Homo sapiens farnesyl-diphosphate farnesyltransferase 1 [synthetic
construct]
gi|61372946|gb|AAX43943.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
gi|61372953|gb|AAX43944.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
Length = 418
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|440913586|gb|ELR63024.1| Squalene synthase [Bos grunniens mutus]
Length = 418
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/386 (47%), Positives = 246/386 (63%), Gaps = 18/386 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M R+ K IP CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMD 120
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F+ K+ +VL D
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLED 124
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GL
Sbjct: 125 FPTVISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGL 184
Query: 181 SKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E WSKYV
Sbjct: 185 SRLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQETWSKYV 241
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
KL D EN D AVQCLN+++TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI TL
Sbjct: 242 KKLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATL 301
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
A CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP +TKT
Sbjct: 302 AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQ 361
Query: 358 SRVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 QIISTIRTQNLPNCQLVSRS---HYS 384
>gi|410916583|ref|XP_003971766.1| PREDICTED: squalene synthase-like [Takifugu rubripes]
Length = 419
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/380 (46%), Positives = 245/380 (64%), Gaps = 17/380 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWA-------FCYSMLHKVSRSFALVIQQLGT 60
L HP++++ L+K KM A + P+ + CY L++ SRSFA VIQ L
Sbjct: 7 LGHPEEIFNLVKFKMGGCSA---VMPKLDYESMSESLRTCYVYLNQTSRSFAAVIQALDG 63
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDD SIP + KVP+L FH ++Y +W F+ ++ + +++
Sbjct: 64 ELRHAVCIFYLVLRALDTVEDDMSIPLNKKVPMLNDFHTYLYQHDWCFTKSQEKDRQVLE 123
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
F +S F L + Y+D I +I RMG GMA+F+ K+V S+ ++D YC+YVAGLVG+GL
Sbjct: 124 DFPTISLEFRNLAQDYRDVISEICHRMGVGMAEFLEKKVGSMKEWDLYCHYVAGLVGVGL 183
Query: 181 SKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
SKLF AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWP+E WS++
Sbjct: 184 SKLFSASKLEDPEVGQDTELANSMGLFLQKTNIIRDYLEDTQE---GRAFWPQEAWSQFA 240
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+LED + D A+ CLN +VT+AL HV D + Y+S LR+ ++F FCAIPQ+MAI TL
Sbjct: 241 GRLEDFAQPQKLDSALSCLNLLVTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATL 300
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
+ CYNN VF+GVVK+R+G ++ NM V +S + K++ DP+ KTL
Sbjct: 301 SSCYNNPMVFQGVVKIRKGQAVTLMMDATNMGAVQTIIAQYSQEIFQKVSLTDPSRDKTL 360
Query: 358 SRVEAIQ-KACMDSGVLNKR 376
+ IQ K+ + L R
Sbjct: 361 HILTVIQEKSTLSQSSLPSR 380
>gi|340376179|ref|XP_003386611.1| PREDICTED: squalene synthase-like [Amphimedon queenslandica]
Length = 410
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/366 (45%), Positives = 243/366 (66%), Gaps = 9/366 (2%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPE---PHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
L HP ++Y LL+ K+ + + P CY +L++ SRSFA VIQ L DLR
Sbjct: 7 LAHPTEIYALLQYKLVGQNVVHSLDTSSLSPDMQRCYELLNQTSRSFAAVIQALDGDLRP 66
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHH 124
AVCIFYLVLRALDT+EDD +IP D K+ +L AFH ++YD +W+F+ ++ K ++++F
Sbjct: 67 AVCIFYLVLRALDTIEDDMTIPPDTKIVLLKAFHTYLYDPKWNFTQSQEKDKAVLEEFPK 126
Query: 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLF 184
+S F +L YQ+ I +I ++MGAGM F+ +V +++++DEYC+YVAGLVG+GL++LF
Sbjct: 127 ISGEFRKLRSRYQEVISEIAQKMGAGMTVFLTNKVNTMEEWDEYCHYVAGLVGIGLTQLF 186
Query: 185 YASGTEDLAPDS---LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE 241
ASG ED + + L+NSMGLFLQKTNIIRDYLED I + R FWP+E WS++ N L
Sbjct: 187 AASGLEDPSIEGNTRLANSMGLFLQKTNIIRDYLED---IVQDREFWPKEAWSQFANDLR 243
Query: 242 DLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCY 301
D + A++CLN ++T+ L + D L+YMS +++ +IF FCAIPQ+MAI TLALCY
Sbjct: 244 DFQKPSKRRDAIRCLNFLITSTLKLLPDVLQYMSYIKNQSIFNFCAIPQMMAIATLALCY 303
Query: 302 NNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVE 361
NN +VF ++K+R+G ++I ++N+ + +S + KI+ DP+ +T S +
Sbjct: 304 NNGKVFEDMIKIRKGQAVQLIMQSNSSNSLQKIIAYYSKEIFNKIDSTDPSGEETRSILT 363
Query: 362 AIQKAC 367
I C
Sbjct: 364 HILLVC 369
>gi|264681450|ref|NP_001161120.1| squalene synthase [Sus scrofa]
gi|262072798|dbj|BAI47707.1| farnesyl-diphosphate farnesyltransferase 1 [Sus scrofa]
Length = 417
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 246/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ +M R+ K IP CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMNQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + K+P+L FH H+Y+ +W F+ ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISIEKKIPLLHNFHLHLYESDWRFTESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F ++ F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+Y AGLVG+GLS
Sbjct: 125 FPTIALEFRNLAEKYQVVIVDVCRKMGFGMAEFLNKHVTSEREWDKYCHYDAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WSKYV
Sbjct: 185 RLFSASELEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN++VT+ L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENVDLAVQCLNELVTSTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V + + + +I +DP + KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPDSDPYSAKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|913349|gb|AAB33404.1| squalene synthase [Homo sapiens]
Length = 417
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/385 (45%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYRYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I ++P+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSNPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|148688708|gb|EDL20655.1| mCG10034 [Mus musculus]
Length = 376
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 234/362 (64%), Gaps = 12/362 (3%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPHWA----FCYSMLHKVSRSFALVIQQLGTDLRNA 65
HP++ Y LL+ R AE P + CY L++ SRSFA VIQ L D+R+A
Sbjct: 9 HPEEFYNLLRFPHG-RPAEFYTQNGPGLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHA 67
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F +
Sbjct: 68 ICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKVRQVLEDFPTI 127
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
S F L + YQ I+DI RMG GMA+F+ K V S D+D+YC+YVAGLVG+GLS LF
Sbjct: 128 SLEFRNLAEKYQTVIDDICHRMGCGMAEFVDKGVTSKQDWDKYCHYVAGLVGIGLSCLFS 187
Query: 186 ASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
AS ED + D +NSMGLFLQKTNIIRDYLED E R FWPRE+W +Y+ KLED
Sbjct: 188 ASEFEDPIVGEDIECANSMGLFLQKTNIIRDYLEDQQE---GRKFWPREVWGRYI-KLED 243
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
EN D A+QCLN+++TNAL H+ D L Y+S L + ++F FCAIPQ MAI TLA CYN
Sbjct: 244 FAKPENVDVALQCLNELITNALQHIPDILTYLSRLWNQSVFNFCAIPQAMAIATLAACYN 303
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEA 362
N +VFRG+VK+R+G ++ NM + Y + + I +DP+++KT +
Sbjct: 304 NQQVFRGIVKIRKGQAVTLMMDATNMPAIKAIIYQYIEEIYHWIPNSDPSSSKTKQVISN 363
Query: 363 IQ 364
I+
Sbjct: 364 IR 365
>gi|441611252|ref|XP_004088003.1| PREDICTED: squalene synthase [Nomascus leucogenys]
Length = 402
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 230/347 (66%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 28 CYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 87
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V
Sbjct: 88 FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGTGMAEFLDKHV 147
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 148 TSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLE 207
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 208 DQQE---GREFWPQEVWSRYVKKLGDFTKPENIDLAVQCLNELITNALHHIPDVITYLSR 264
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y
Sbjct: 265 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIY 324
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I +DP+++KT + I+ + + L R HYS
Sbjct: 325 QYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRS---HYS 368
>gi|343961391|dbj|BAK62285.1| hypothetical protein [Pan troglodytes]
Length = 415
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/385 (45%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L H +Y +W F ++ + +++
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNLHSFLYQPDWRFMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 185 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 302 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|73993617|ref|XP_534557.2| PREDICTED: squalene synthase isoform 1 [Canis lupus familiaris]
Length = 417
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/385 (45%), Positives = 246/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L P++ Y LL+ +M R+ K IP CY L++ SRSFA VI+ L +
Sbjct: 7 LGRPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W + ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+WSKYV
Sbjct: 185 RLFSASELEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQRE---GREFWPQEVWSKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D +N D AVQCLN+++TNAL H+ + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPQNIDSAVQCLNELITNALHHIPHVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G+VK+R+G ++ NM V Y + + +I +DP++ KT
Sbjct: 302 ACYNNQQVFKGIVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|194208309|ref|XP_001915483.1| PREDICTED: squalene synthase-like [Equus caballus]
Length = 408
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 231/347 (66%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++R+AVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 34 CYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 93
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
++Y+ +W F ++ + +++ F +S F L + YQ I DI ++MG GMA+F+ K V
Sbjct: 94 YLYEPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGYGMAEFLDKHV 153
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED L + L +NSMGLFLQKTNIIRDYLE
Sbjct: 154 TSEREWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDLERANSMGLFLQKTNIIRDYLE 213
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWP+E+WSKYV KL D EN D AVQCLN+++TN L H+ D + Y+S
Sbjct: 214 DQRE---GREFWPQEVWSKYVKKLSDFAKPENIDSAVQCLNELITNTLHHIPDVITYLSR 270
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G ++ NM V Y
Sbjct: 271 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIY 330
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I +DP++ KT + I+ + + L R HYS
Sbjct: 331 QYMEEIYHRIPNSDPSSGKTRQIISTIRTQNLPNCQLISRS---HYS 374
>gi|355779505|gb|EHH63981.1| Squalene synthase [Macaca fascicularis]
Length = 468
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 230/347 (66%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 94 CYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 153
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V
Sbjct: 154 FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLDKHV 213
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 214 TSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLE 273
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 274 DQQE---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSR 330
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y
Sbjct: 331 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIY 390
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I +DP+++KT + I+ + + L R HYS
Sbjct: 391 QYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRS---HYS 434
>gi|432946174|ref|XP_004083804.1| PREDICTED: squalene synthase-like [Oryzias latipes]
Length = 412
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/367 (46%), Positives = 239/367 (65%), Gaps = 16/367 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHW-------AFCYSMLHKVSRSFALVIQQLGT 60
L HP++++ L + KM +A + P+ + CY L++ SRSFA VIQ L
Sbjct: 7 LGHPEEIFNLFRFKMGGCRA---VMPKLDYDSMSQTLRTCYVYLNQTSRSFAAVIQALDG 63
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDD +IP D KVP+L FH ++Y +W F+ ++ + ++
Sbjct: 64 ELRHAVCIFYLVLRALDTVEDDMTIPLDKKVPMLTHFHTYLYQEDWCFTESQEKDRQVLA 123
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
F +S F L Y++ I DI MG GMA+F+ K+V S+ ++D+YC+YVAGLVG+GL
Sbjct: 124 DFPTISLEFRNLALVYREVISDICHHMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGL 183
Query: 181 SKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
S+LF AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWP+E WS++
Sbjct: 184 SRLFSASQLEDPEVGQDTELANSMGLFLQKTNIIRDYLEDTKE---GRAFWPQEAWSQFA 240
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+LEDL + + A+ CLN +VT+AL HV D + Y+S L + ++F FCAIPQ+MAI TL
Sbjct: 241 GRLEDLAQPDKLESALSCLNLLVTDALRHVPDVIAYLSRLHNQSVFNFCAIPQVMAIATL 300
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTL 357
+ CYNN VF+GVVK+R+G ++ NM V + +S + K++ DP+ KTL
Sbjct: 301 SSCYNNPMVFQGVVKIRKGQAVTLMMEATNMQAVQTIIFQYSQEILQKVSLTDPSRDKTL 360
Query: 358 SRVEAIQ 364
+ IQ
Sbjct: 361 HILAVIQ 367
>gi|328872399|gb|EGG20766.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium
fasciculatum]
Length = 782
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/370 (47%), Positives = 239/370 (64%), Gaps = 12/370 (3%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L P++ LLK+ K E + +CY +L+K SRSFA VI +L LR+A
Sbjct: 373 LSRPEEFISLLKIGYTESFKPKAQLKENLDNKEWCYELLNKTSRSFAFVISELEPQLRDA 432
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC-GTK-EYKVLMDQFH 123
+CIFYLVLR LDTVEDDT++P DVK+P++ F +Y + S GT + + L++ F
Sbjct: 433 ICIFYLVLRGLDTVEDDTTVPLDVKLPVMHKFAEGLYQPGFKASGYGTNNDERHLVENFD 492
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
V FL L +G+ I+DITKRM GM++F+ KEV ++ ++D YC+YVAGLVG+GLSK+
Sbjct: 493 KVVDVFLSLNEGFCPIIQDITKRMAYGMSEFLQKEVVTMPEWDLYCHYVAGLVGIGLSKI 552
Query: 184 FYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F+ASG E D SN MGL LQKTNIIRDYLEDINE R+FWPREIWSKY KL
Sbjct: 553 FHASGLEGEWFATADKESNEMGLLLQKTNIIRDYLEDINE---NRIFWPREIWSKYTVKL 609
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
++ K + + A+ CLND++TNAL H CL YM L++ + FCAIPQ+MAI TL C
Sbjct: 610 DNFKNPQYASSALHCLNDLITNALSHTIVCLDYMGRLKNPKVIGFCAIPQVMAIATLNAC 669
Query: 301 YNNIEVFRGVVKMRRGLTAKVID--RTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
YNN VF GVVK+R+G A ++D ++ + + F+ +++ + K+ +DPNA KTL
Sbjct: 670 YNNHGVFTGVVKIRKGERALIVDAIQSKGIQGTFELFFKYAHEMSTKVPASDPNAKKTLE 729
Query: 359 RVEAIQKACM 368
+ IQ C+
Sbjct: 730 YLNEIQSICV 739
>gi|355688507|gb|AER98525.1| farnesyl-diphosphate farnesyltransferase 1 [Mustela putorius furo]
Length = 416
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/385 (45%), Positives = 246/385 (63%), Gaps = 17/385 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTD 61
L P++ Y LL+ +M R+ K IP + CY L++ SRSFA VI+ L +
Sbjct: 7 LGRPEEFYNLLRFQMGGRR--KVIPKMDQDSLSNSLKTCYKYLNQTSRSFAAVIEALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W + ++ + +++
Sbjct: 65 MRHAVCIFYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLED 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 125 FPTISLEFRNLAEKYQTVIVDICQKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 184
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+W KYV
Sbjct: 185 RLFSASELEDPLVGEDTECANSMGLFLQKTNIIRDYLEDHRE---GREFWPQEVWGKYVK 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D +N D AVQCLN+++TNAL H+ + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 242 KLGDFAKPQNIDSAVQCLNELITNALHHIPHVITYLSRLRNQSVFNFCAIPQVMAIATLA 301
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP++ KT
Sbjct: 302 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQ 361
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 362 IISTIRTQNLPNCQLISRS---HYS 383
>gi|47224313|emb|CAG09159.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/329 (51%), Positives = 224/329 (68%), Gaps = 6/329 (1%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY+ L++ SRSFA VIQ L +LR+AVCIFYLVLRALDTVEDD SIP D KVP+L FH
Sbjct: 81 CYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPLDKKVPMLNDFHT 140
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
++Y +W F+ ++ + +++ F +S F L + Y+D I +I RMG GMA+F+ K V
Sbjct: 141 YLYQHDWCFTESQEKDRQVLEDFPTISLEFRNLAQVYRDVISEICHRMGVGMAEFLEKNV 200
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S+ ++D YC+YVAGLVG+GLSKLF AS ED + D+ L+NSMGLFLQKTNIIRDYLE
Sbjct: 201 GSMKEWDLYCHYVAGLVGVGLSKLFSASKLEDPEVGQDTELANSMGLFLQKTNIIRDYLE 260
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWP+E WS++ +LED E D A+ CLN +VT+AL HV D + Y+S
Sbjct: 261 DTQE---GRAFWPQEAWSQFAGRLEDFAQPEKLDSALSCLNLLVTDALRHVPDVIAYLSR 317
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TL+ CYNN VF+GVVK+R+G ++ NM V
Sbjct: 318 LRNQSVFNFCAIPQVMAIATLSTCYNNPLVFQGVVKIRKGQAVTLMMDATNMGAVQSIIA 377
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQK 365
+S + K++ DP+ KTL + IQ+
Sbjct: 378 QYSQEIFQKVSLTDPSRDKTLHILAIIQE 406
>gi|194388454|dbj|BAG60195.1| unnamed protein product [Homo sapiens]
gi|221045752|dbj|BAH14553.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/347 (48%), Positives = 229/347 (65%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 100 CYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 159
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V
Sbjct: 160 FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHV 219
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 220 TSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLE 279
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 280 DQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSR 336
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y
Sbjct: 337 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIY 396
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I +DP+++KT + I+ + + L R HYS
Sbjct: 397 QYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRS---HYS 440
>gi|417401598|gb|JAA47679.1| Putative squalene synthetase [Desmodus rotundus]
Length = 476
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 230/347 (66%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY LH+ SRSFA VIQ L ++R+AVCIFYLVLRALDT+EDD +I + K+P+L FH
Sbjct: 102 CYKYLHQTSRSFAAVIQALDEEMRHAVCIFYLVLRALDTLEDDMTISIEKKIPLLHNFHS 161
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
++Y+ EW F ++ + +++ F +S F L YQ I DI ++MG GMA+F+ K V
Sbjct: 162 YLYEPEWRFMESKEKDRQVLEDFPTISLEFRNLAVKYQTVIVDICRKMGFGMAEFLDKHV 221
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDSLS-NSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ S NSMGLFLQKTNIIRDYLE
Sbjct: 222 TSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDTESANSMGLFLQKTNIIRDYLE 281
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWP+E+WSKYV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 282 DQQE---GREFWPQEVWSKYVKKLSDFAKPENIDVAVQCLNELITNALGHIPDIITYLSR 338
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G ++ +M V Y
Sbjct: 339 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATSMPAVKAIIY 398
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I + +++KT + I+ + S L R HYS
Sbjct: 399 QYMEEIYHRIPDSGSSSSKTRQVISRIRTQNLPSCQLISRS---HYS 442
>gi|383875635|pdb|3VJ8|A Chain A, Crystal Structure Of The Human Squalene Synthase
gi|383875636|pdb|3VJ9|A Chain A, Crystal Structure Of The Human Squalene Synthase
gi|383875637|pdb|3VJA|A Chain A, Crystal Structure Of The Human Squalene Synthase
gi|383875638|pdb|3VJA|B Chain B, Crystal Structure Of The Human Squalene Synthase
gi|383875639|pdb|3VJB|A Chain A, Crystal Structure Of The Human Squalene Synthase
gi|383875640|pdb|3VJB|B Chain B, Crystal Structure Of The Human Squalene Synthase
gi|383875641|pdb|3VJB|C Chain C, Crystal Structure Of The Human Squalene Synthase
gi|383875642|pdb|3VJB|D Chain D, Crystal Structure Of The Human Squalene Synthase
gi|383875643|pdb|3VJB|E Chain E, Crystal Structure Of The Human Squalene Synthase
gi|383875644|pdb|3VJB|F Chain F, Crystal Structure Of The Human Squalene Synthase
gi|383875645|pdb|3VJC|A Chain A, Crystal Structure Of The Human Squalene Synthase In
Complex With Zaragozic Acid A
gi|383875646|pdb|3VJC|B Chain B, Crystal Structure Of The Human Squalene Synthase In
Complex With Zaragozic Acid A
gi|383875647|pdb|3VJC|C Chain C, Crystal Structure Of The Human Squalene Synthase In
Complex With Zaragozic Acid A
gi|383875648|pdb|3VJC|D Chain D, Crystal Structure Of The Human Squalene Synthase In
Complex With Zaragozic Acid A
gi|383875649|pdb|3VJC|E Chain E, Crystal Structure Of The Human Squalene Synthase In
Complex With Zaragozic Acid A
gi|383875650|pdb|3VJC|F Chain F, Crystal Structure Of The Human Squalene Synthase In
Complex With Zaragozic Acid A
Length = 343
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 222/328 (67%), Gaps = 6/328 (1%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 16 CYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 75
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V
Sbjct: 76 FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHV 135
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 136 TSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLE 195
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 196 DQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSR 252
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y
Sbjct: 253 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIY 312
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQ 364
+ + +I +DP+++KT + I+
Sbjct: 313 QYMEEIYHRIPDSDPSSSKTRQIISTIR 340
>gi|11514495|pdb|1EZF|A Chain A, Crystal Structure Of Human Squalene Synthase
gi|11514496|pdb|1EZF|B Chain B, Crystal Structure Of Human Squalene Synthase
gi|11514497|pdb|1EZF|C Chain C, Crystal Structure Of Human Squalene Synthase
Length = 340
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 222/328 (67%), Gaps = 6/328 (1%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 13 CYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 72
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V
Sbjct: 73 FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHV 132
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 133 TSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLE 192
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 193 DQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSR 249
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y
Sbjct: 250 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIY 309
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQ 364
+ + +I +DP+++KT + I+
Sbjct: 310 QYMEEIYHRIPDSDPSSSKTRQIISTIR 337
>gi|313754278|pdb|3LEE|A Chain A, Crystal Structure Of The Human Squalene Synthase Complexed
With Bph- 652
gi|313754279|pdb|3LEE|B Chain B, Crystal Structure Of The Human Squalene Synthase Complexed
With Bph- 652
gi|313754280|pdb|3LEE|C Chain C, Crystal Structure Of The Human Squalene Synthase Complexed
With Bph- 652
gi|313754281|pdb|3LEE|D Chain D, Crystal Structure Of The Human Squalene Synthase Complexed
With Bph- 652
gi|313754282|pdb|3LEE|E Chain E, Crystal Structure Of The Human Squalene Synthase Complexed
With Bph- 652
gi|313754283|pdb|3LEE|F Chain F, Crystal Structure Of The Human Squalene Synthase Complexed
With Bph- 652
gi|364505896|pdb|3ASX|A Chain A, Human Squalene Synthase In Complex With
1-{4-[{4-Chloro-2-[(2-
Chlorophenyl)(Hydroxy)methyl]phenyl}(2,
2-Dimethylpropyl)amino]-4-
Oxobutanoyl}piperidine-3-Carboxylic Acid
gi|364505998|pdb|3Q2Z|A Chain A, Human Squalene Synthase In Complex With
N-[(3r,5s)-7-Chloro-5-(2,3-
Dimethoxyphenyl)-1-Neopentyl-2-Oxo-1,2,3,5-Tetrahydro-4,
1- Benzoxazepine-3-Acetyl]-L-Aspartic Acid
gi|364505999|pdb|3Q30|A Chain A, Human Squalene Synthase In Complex With
(2r,3r)-2-Carboxymethoxy-3-[5-
(2-Naphthalenyl)pentyl]aminocarbonyl-3-[5-(2-
Naphthalenyl) Pentyloxy]propionic Acid
gi|430800749|pdb|3V66|A Chain A, Human Squalene Synthase In Complex With
2-(1-{2-[(4r,6s)-8-Chloro-6-
(2,3-Dimethoxyphenyl)-4h,6h-Pyrrolo[1,2-A][4,
1]benzoxazepin-4- Yl]acetyl}-4-Piperidinyl)acetic Acid
Length = 340
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 222/328 (67%), Gaps = 6/328 (1%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH
Sbjct: 13 CYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS 72
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V
Sbjct: 73 FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHV 132
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 133 TSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLE 192
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D R FWP+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S
Sbjct: 193 DQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSR 249
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y
Sbjct: 250 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIY 309
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQ 364
+ + +I +DP+++KT + I+
Sbjct: 310 QYMEEIYHRIPDSDPSSSKTRQIISTIR 337
>gi|313509760|gb|ADR66128.1| squalene synthase, partial [Hieracium porrifolium]
gi|313509762|gb|ADR66129.1| squalene synthase, partial [Hieracium scabrum]
gi|313509764|gb|ADR66130.1| squalene synthase, partial [Hieracium cf. guatemalense KK-2010]
gi|313509766|gb|ADR66131.1| squalene synthase, partial [Hieracium intybaceum]
gi|313509768|gb|ADR66132.1| squalene synthase, partial [Hieracium intybaceum]
Length = 173
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/173 (89%), Positives = 164/173 (94%)
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
HVS AFLEL KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKL
Sbjct: 1 HVSAAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKL 60
Query: 184 FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
F+A GTE L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+L
Sbjct: 61 FHAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEEL 120
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
KYEENS+KAVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQIMAIGT
Sbjct: 121 KYEENSEKAVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQIMAIGT 173
>gi|313509758|gb|ADR66127.1| squalene synthase, partial [Hieracium umbellatum]
Length = 173
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 154/173 (89%), Positives = 163/173 (94%)
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
HVS AFLEL KGYQ+AIEDIT RMGAGMAKFIC EVE+IDDYDEYC+YVAGLVGLGLSKL
Sbjct: 1 HVSAAFLELKKGYQEAIEDITMRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGLGLSKL 60
Query: 184 FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
F+A GTE L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+L
Sbjct: 61 FHAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEEL 120
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
KYEENS+KAVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQIMAIGT
Sbjct: 121 KYEENSEKAVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQIMAIGT 173
>gi|313509748|gb|ADR66122.1| squalene synthase, partial [Pilosella onegensis]
gi|313509750|gb|ADR66123.1| squalene synthase, partial [Pilosella onegensis]
gi|313509752|gb|ADR66124.1| squalene synthase, partial [Pilosella lactucella]
Length = 173
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 154/173 (89%), Positives = 164/173 (94%)
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
HVS AFLEL KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKL
Sbjct: 1 HVSAAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKL 60
Query: 184 FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
F+A GTE L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+L
Sbjct: 61 FHAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEEL 120
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
KYEENS+KAVQCLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQIMAIGT
Sbjct: 121 KYEENSEKAVQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQIMAIGT 173
>gi|351695296|gb|EHA98214.1| Squalene synthetase [Heterocephalus glaber]
Length = 414
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/347 (47%), Positives = 231/347 (66%), Gaps = 9/347 (2%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VIQ L D+R+AVC+FYLVLRALDT+EDD +I + KVP+L +FH
Sbjct: 40 CYKYLNQTSRSFAAVIQALDGDIRHAVCVFYLVLRALDTLEDDMTISVEKKVPLLRSFHT 99
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+Y+ +W + ++++ +++ F +S F L + Y+ I DI ++MG+GMA+F+ K V
Sbjct: 100 FLYEPDWRYMESKEKHRQVLEDFPTISLEFRSLAEKYRIVIADICQKMGSGMAEFLDKHV 159
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLE 216
S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLE
Sbjct: 160 TSKQEWDKYCHYVAGLVGIGLSRLFSASEFEDPVVGEDTERANSMGLFLQKTNIIRDYLE 219
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D E R FWP+E+W +YV KL D EN D AVQCLN+++TN L H+ D + Y+S
Sbjct: 220 DQQE---GREFWPQEVWGRYVKKLGDFAQPENMDVAVQCLNELITNTLHHIPDVITYLSR 276
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFY 336
LR+ ++F FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G ++ NM V
Sbjct: 277 LRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIS 336
Query: 337 DFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + +I +DP++ KT + I+ + + L R HYS
Sbjct: 337 QYMEEIYHRIPSSDPSSHKTRQIISTIRTQNLPNCQLLSRS---HYS 380
>gi|72137101|ref|XP_790906.1| PREDICTED: squalene synthase [Strongylocentrotus purpuratus]
Length = 411
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 239/372 (64%), Gaps = 13/372 (3%)
Query: 10 HPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
HPD++ LLK K+ Q +K P CY L++ SRSFA VIQ L DLR+A
Sbjct: 9 HPDEVMALLKFKLGGGQHIIPKQKLDEMSPTARKCYVYLNQTSRSFAAVIQALDGDLRHA 68
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDTVEDD +IP KV +L F++++ +W + + +++++ F +
Sbjct: 69 VCIFYLVLRALDTVEDDMTIPLKDKVQMLQNFYKNLESPDWKYMDSKDKDRIVLEDFPTI 128
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
ST + L + Y++ I DI RMG GM++ + EV ++ D++ YC+YVAGLVG+GLSKLF
Sbjct: 129 STEYRSLDEHYREVISDICHRMGDGMSEVLQTEVITLQDWNMYCHYVAGLVGIGLSKLFS 188
Query: 186 ASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
AS ED + D+ LSNSMGLFLQKTNIIRDYLED I K R FWPR++WSKY KL D
Sbjct: 189 ASKLEDPIVGKDTQLSNSMGLFLQKTNIIRDYLED--NIDK-REFWPRDVWSKYGKKLSD 245
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
+ +EN A+ CLN+++TNAL HV D +KYMS LR+ +F FCAIPQ+MAI TLA CYN
Sbjct: 246 FQEKENITPALHCLNELITNALEHVPDVIKYMSRLRNQTVFNFCAIPQVMAIATLAKCYN 305
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKT---LSR 359
N VF GVVK+R+G ++ + Y ++ + I DP+A KT ++
Sbjct: 306 NRNVFSGVVKIRKGQAVGLMMEATCFQSLRRILYKYAQEIGKTIPPGDPSAPKTQKIITT 365
Query: 360 VEAIQKACMDSG 371
V ++ + M +G
Sbjct: 366 VTSLGEDTMITG 377
>gi|449016274|dbj|BAM79676.1| squalene synthase [Cyanidioschyzon merolae strain 10D]
Length = 496
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/383 (46%), Positives = 243/383 (63%), Gaps = 25/383 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA----EKQIPPE-------PHWAFCYSMLHKVSR 49
MG+L VL HPD+L+ L+K + SR+A E+ + W FCY L +VSR
Sbjct: 1 MGALRTVLCHPDELWALVKYREKSRKAVNVQEEGLRQRVGDAERIADWRFCYEYLRRVSR 60
Query: 50 SFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF- 108
SFALVI +L ++LR+ VCIFYL+LRALDT+EDDTS+ +++ + + H+ +
Sbjct: 61 SFALVIMELDSELRDPVCIFYLILRALDTIEDDTSVDATLRMRLCQELYTHLQGNSYAVH 120
Query: 109 SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDE 167
G+ + + L+++F V F EL Y++ I DIT+ MG GMA+ I K +I DYD
Sbjct: 121 DIGSADERKLLEEFPRVLGCFHELKPAYREIITDITRCMGDGMAQHIHHKACATIADYDL 180
Query: 168 YCYYVAGLVGLGLSKLFYASG-------TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE 220
YC+YVAGLVG+GLS +F ASG E D+L+NSMGLFLQKTNIIRDYLED +
Sbjct: 181 YCHYVAGLVGIGLSAMFAASGYESREVFVESKLADALANSMGLFLQKTNIIRDYLEDQRD 240
Query: 221 IPKCRMFWPREIWSKYVNKLE--DLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALR 278
R FWP+EIW ++ +E DL E+ AV+CLN MVT+AL HV DCL+YMS +R
Sbjct: 241 ---GRTFWPQEIWGRFGKDMELADLARPEHRRVAVECLNAMVTDALRHVPDCLQYMSQVR 297
Query: 279 DHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDF 338
++F F AIPQ+MAI TLALCYNN +VF VK+RRG TAK++ R +M V F ++
Sbjct: 298 SESVFYFVAIPQVMAIATLALCYNNADVFVRRVKLRRGQTAKLVLRARDMPAVLTIFTEY 357
Query: 339 SNILKPKINKNDPNATKTLSRVE 361
+ ++ DP+ +T++ VE
Sbjct: 358 CEAIASSVDPCDPSYAETVAAVE 380
>gi|398020453|ref|XP_003863390.1| farnesyltransferase, putative [Leishmania donovani]
gi|322501622|emb|CBZ36703.1| farnesyltransferase, putative [Leishmania donovani]
Length = 414
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 173/370 (46%), Positives = 237/370 (64%), Gaps = 14/370 (3%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R + Q+PPE FCY +++ VSRSFA+V+ QL LR+A+CIFY
Sbjct: 6 DSVAMMRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P DVK+ L FH H D W S G + L++++ VS AF
Sbjct: 66 LVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSRAF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L KGYQD I +I +RM GM +F+ + V + DDY+EYC+YVAGLVG GL++LF G
Sbjct: 126 KKLKKGYQDVIANICERMANGMCEFLKRPVVTKDDYNEYCHYVAGLVGHGLTQLFARCGF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED + D + SN MGLFLQKTNIIRDY EDI E P RMFWP+EIW YV +L++LK E
Sbjct: 186 EDPSLDDDLTSSNHMGLFLQKTNIIRDYYEDIREEPP-RMFWPKEIWGTYVTELKELKSE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
N+ AVQCLN MV +AL+HV + Y+SALRD ++FRFCAIPQ+MAI TL YNN +
Sbjct: 245 SNNAAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK-------TLSR 359
F+ VK+ R + +++ + + D+ L+ K++ D ++T + R
Sbjct: 305 FQVKVKVSRPESCRIMLKATTLYSSLSMLRDYCVELQEKLDMQDASSTSIANSLAAAIER 364
Query: 360 VEAIQKACMD 369
++ K C D
Sbjct: 365 IDLQLKKCQD 374
>gi|405789930|gb|AFS28708.1| putative squalene synthase, partial [Olea europaea]
Length = 171
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 161/171 (94%)
Query: 172 VAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
VAGLVGLGLSKLFYASG EDLA D+LSNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR+
Sbjct: 1 VAGLVGLGLSKLFYASGKEDLASDTLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQ 60
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWSKYVNKLEDLKYEENS KAVQCLNDMVTNAL+HVEDCLKYMSALRD AIFRFCAIPQI
Sbjct: 61 IWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALIHVEDCLKYMSALRDPAIFRFCAIPQI 120
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
MAIGTLALCYNNI+VFRGVVKMRRGLTAKVIDRT M+DVY FYDFS +L
Sbjct: 121 MAIGTLALCYNNIQVFRGVVKMRRGLTAKVIDRTKTMSDVYGDFYDFSRML 171
>gi|146095591|ref|XP_001467618.1| putative farnesyltransferase [Leishmania infantum JPCM5]
gi|134071983|emb|CAM70682.1| putative farnesyltransferase [Leishmania infantum JPCM5]
Length = 414
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/356 (47%), Positives = 233/356 (65%), Gaps = 7/356 (1%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R + Q+PPE FCY +++ VSRSFA+V+ QL LR+A+CIFY
Sbjct: 6 DSVAMMRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P DVK+ L FH H D W S G + L++++ VS AF
Sbjct: 66 LVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSRAF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L KGYQD I +I +RM GM +F+ + V + DDY+EYC+YVAGLVG GL++LF G
Sbjct: 126 KKLKKGYQDVIANICERMANGMCEFLKRPVVTKDDYNEYCHYVAGLVGHGLTQLFARCGF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED + D + SN MGLFLQKTNIIRDY EDI E P RMFWP+EIW YV +L++LK E
Sbjct: 186 EDPSLDDDLTSSNHMGLFLQKTNIIRDYYEDIREEPP-RMFWPKEIWGTYVTELKELKSE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
N+ AVQCLN MV +AL+HV + Y+SALRD ++FRFCAIPQ+MAI TL YNN +
Sbjct: 245 SNNAAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEA 362
F+ VK+ R + +++ + + D+ L+ K++ D ++T + + A
Sbjct: 305 FQVKVKVSRPESCRIMLKATTLYSSLSMLRDYCVELQEKLDMQDASSTSIANSLAA 360
>gi|440795536|gb|ELR16656.1| farnesyldiphosphate farnesyltransferase [Acanthamoeba castellanii
str. Neff]
Length = 472
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 169/371 (45%), Positives = 237/371 (63%), Gaps = 8/371 (2%)
Query: 7 VLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
++ HP + Y +LK K + + + Y L KVSRSFA VI +L DLR +
Sbjct: 99 LMAHPYEFYQMLKFKFFYKVPDFPKNLSEADIYSYKKLVKVSRSFAAVIAELPEDLRRPI 158
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC--GTKEYKVLMDQFHH 124
FYLVLR LDTVEDD SIP + K+P L +F++H+Y++ W+ S + + L+++FH+
Sbjct: 159 ANFYLVLRGLDTVEDDMSIPLEKKMPELRSFYKHLYEKGWNVSGYGDNADERDLLERFHY 218
Query: 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKL 183
V FL+L YQ I DIT+RMG GMAK+ K V +++DY+EYC+YVAGLVG+GLS++
Sbjct: 219 VVDVFLDLKPAYQQVIADITRRMGEGMAKYAGEKTVVTLEDYNEYCHYVAGLVGIGLSQM 278
Query: 184 FYASGTEDL---APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F ASG E D L+NSMGLFLQKTNI RDYLED+ + R+F+P++IW KY +
Sbjct: 279 FAASGLESEKFGQMDELANSMGLFLQKTNITRDYLEDVTAV-NPRIFYPKDIWGKYAKNI 337
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
DLK EN ++A+QCLN+MVTNA+ H+ DCL YM L +F+FC +PQ MAI TLA
Sbjct: 338 GDLKEPENKEQALQCLNEMVTNAMAHINDCLDYMMLLTHPNVFKFCGLPQAMAIATLARI 397
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+ VK+R+G +++ N + F + L+ KI ++DPNA K +
Sbjct: 398 YNNYDVFKREVKIRKGEAVQIMMYGGNYETIISYFVQYIKELEDKIPESDPNAEKMRHYI 457
Query: 361 EAIQKACMDSG 371
A+ +A + G
Sbjct: 458 -AVARARIAKG 467
>gi|71408865|ref|XP_806809.1| farnesyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70870663|gb|EAN84958.1| farnesyltransferase, putative [Trypanosoma cruzi]
Length = 404
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 230/348 (66%), Gaps = 6/348 (1%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
+ + ++LY ++++K R+ EK I + FCY +L VSRSFA+VI +L ++R+AV
Sbjct: 1 MEYMEELYAMVRMKWRLRRIEKGIACNDEDLRFCYDILQAVSRSFAVVIMELDEEMRDAV 60
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHV 125
CIFYLVLRALDTVEDD SIP D K+ L FH H++D W S G + L++++ HV
Sbjct: 61 CIFYLVLRALDTVEDDMSIPVDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHV 120
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
+ A+ LGK YQD I I +RM GM F+ ++VE+ DYD YC+YVAGLVG GL+ L+
Sbjct: 121 TRAYSRLGKAYQDVISGICERMANGMCDFLTRKVETKADYDLYCHYVAGLVGHGLTLLYV 180
Query: 186 ASGTEDLA-PDSLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
+SG ED+ D L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L
Sbjct: 181 SSGLEDVRLADDLTNANHMGLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHA 239
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
K E + KAV+CLN MV +AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +N
Sbjct: 240 FKDELHEAKAVECLNAMVADALVHVPHVVEYLASLRDPSVFTFSAIPQVMAMATLSLVFN 299
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
N +VF VK RG TA++ + + ++ L ++N D
Sbjct: 300 NKDVFHTKVKTTRGATARIFHYSTELQATLQMLKTYTLRLAARMNAQD 347
>gi|313509738|gb|ADR66117.1| squalene synthase, partial [Helianthus annuus]
Length = 167
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/167 (89%), Positives = 160/167 (95%)
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
HV+TAFLEL KGYQ+AIEDITKRMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGLSKL
Sbjct: 1 HVATAFLELKKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKL 60
Query: 184 FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
F+ASGTE L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLED
Sbjct: 61 FHASGTEILFPDSMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDF 120
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
KYE+NS+KAVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 KYEDNSEKAVQCLNDMVTNALIHIEDCLKYMSDLRDPAIFRFCAIPQ 167
>gi|313509740|gb|ADR66118.1| squalene synthase, partial [Zinnia violacea]
Length = 167
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/167 (89%), Positives = 159/167 (95%)
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
HV+TAFLEL KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKL
Sbjct: 1 HVATAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKL 60
Query: 184 FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
F+ASGTE PDSLSNSMGLFLQKTNIIRDYLEDINEIP+ RMFWPREIWSKYVNKLEDL
Sbjct: 61 FHASGTEISFPDSLSNSMGLFLQKTNIIRDYLEDINEIPRSRMFWPREIWSKYVNKLEDL 120
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
KYEENS+KA+QCLNDMVTNALMH+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 KYEENSEKAIQCLNDMVTNALMHIEDCLKYMSDLRDPAIFRFCAIPQ 167
>gi|407852900|gb|EKG06138.1| squalene synthase, putative [Trypanosoma cruzi]
Length = 404
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 229/348 (65%), Gaps = 6/348 (1%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
+ + ++LY ++++K R+ E I + FCY +L VSRSFA+VI +L ++R+AV
Sbjct: 1 MEYMEELYAMVRMKWRLRRIETGIACNDEDLRFCYDILQAVSRSFAIVIMELDEEMRDAV 60
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHV 125
CIFYLVLRALDTVEDD SIP D K+ L FH H++D W S G + L++++ HV
Sbjct: 61 CIFYLVLRALDTVEDDMSIPIDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHV 120
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
+ A+ LGK YQD I I +RM GM F+ ++VE+ DYD YC+YVAGLVG GL+ L+
Sbjct: 121 TRAYSRLGKAYQDVISGICERMANGMCDFLTRKVETKADYDLYCHYVAGLVGHGLTLLYV 180
Query: 186 ASGTEDL-APDSLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
+SG ED+ D L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L
Sbjct: 181 SSGLEDVRIADDLTNANHMGLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHA 239
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
K E + KAV+CLN MV +AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +N
Sbjct: 240 FKDELHEAKAVECLNAMVADALVHVPHVVEYLASLRDPSVFTFSAIPQVMAMATLSLVFN 299
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
N +VF VK RG TA++ + + ++ L ++N D
Sbjct: 300 NKDVFHTKVKTTRGATARIFHYSTELQATLQMLKTYTLRLAARMNAQD 347
>gi|443689858|gb|ELT92149.1| hypothetical protein CAPTEDRAFT_164295 [Capitella teleta]
Length = 417
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 230/359 (64%), Gaps = 10/359 (2%)
Query: 10 HPDDLYPLLKLKMASRQAEKQI----PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
HP+++Y LLK K+ + CY L SRSFA VIQ L +LR+A
Sbjct: 9 HPEEVYALLKYKIGGCHTTVAKCDYDKMSDNLKTCYEFLKLTSRSFAAVIQALDGELRDA 68
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VC+FYLVLRALDTVEDD S+P +VK+P+L F+ ++ + +W F T++ K++++QF +
Sbjct: 69 VCLFYLVLRALDTVEDDMSLPNEVKIPMLKDFYSYLENPQWKFMESTEKDKIVLEQFPVI 128
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
S F +L Y++AI D+TKRMG GM ++ K +++ +DEYC+YVAGLVG+GLS+LF
Sbjct: 129 SAEFRKLSPIYKEAISDVTKRMGHGMTVYLDKAPDTLQQWDEYCHYVAGLVGIGLSRLFA 188
Query: 186 ASGTEDLA---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
AS E D L+NSMGLFLQKTNIIRDYLED+ + R FWP++ W KY D
Sbjct: 189 ASKLESEEVGKDDKLANSMGLFLQKTNIIRDYLEDVQQ---NRHFWPKQAWGKYGTGQGD 245
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
L N A+ CLN++VTNAL HV D L Y+ L++ ++F FCAIPQ+MAI TL CYN
Sbjct: 246 LLKPGNQQYAMACLNELVTNALHHVPDVLVYLGRLQNQSVFNFCAIPQVMAIATLERCYN 305
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVE 361
N +F GVVK+R+G K++ + ++ V F+ +K +++ +DP A T + ++
Sbjct: 306 NPNIFTGVVKIRKGEAVKMMLQATSLDSVKAIMTHFTLKIKERVSPDDPTAPATSAVID 364
>gi|157873553|ref|XP_001685284.1| putative squalene synthase [Leishmania major strain Friedlin]
gi|68128355|emb|CAJ08546.1| putative squalene synthase [Leishmania major strain Friedlin]
Length = 414
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/370 (45%), Positives = 234/370 (63%), Gaps = 14/370 (3%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R + Q+PPE FCY +++ VSRSFA+V+ QL LR+A+CIFY
Sbjct: 6 DSVAMMRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P DVK+ L FH H D W S G + L+ ++ VS F
Sbjct: 66 LVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLAKYPCVSREF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L K YQD I +I +RM GM +F+ + V + DDY++YC+YVAGLVG GL++LF G
Sbjct: 126 KKLKKEYQDVIANICERMANGMCEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLFARCGF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED + D + SN MGLFLQKTNIIRDY EDI E P RMFWP+EIW YV +L++LK E
Sbjct: 186 EDPSLDDDLTSSNHMGLFLQKTNIIRDYYEDIREEPP-RMFWPKEIWGTYVTELKELKSE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
N+ AVQCLN MV +AL+HV + Y+SALRD ++FRFCAIPQ+MAI TL YNN +
Sbjct: 245 SNNAAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK-------TLSR 359
F+ VK+ R + +++ + + F D+ L+ K++ D ++ + R
Sbjct: 305 FQVKVKVSRPESCRIMLKATTLYSSLSMFRDYCVELQEKLDMQDASSVSIANSLAAAIER 364
Query: 360 VEAIQKACMD 369
++ K C D
Sbjct: 365 IDLQLKKCQD 374
>gi|401426658|ref|XP_003877813.1| putative farnesyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494059|emb|CBZ29355.1| putative farnesyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 414
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 236/370 (63%), Gaps = 14/370 (3%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R A+ ++PPE FCY +++ VSRSFA+V+ QL LR+++CIFY
Sbjct: 6 DSVAMMRVKWQMRSAKIRVPPEETDLRFCYDIMNDVSRSFAVVVAQLSDQQLRDSICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P DVK+ L FH H D W S G + L++++ VS F
Sbjct: 66 LVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSREF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L K YQD I +I +RM GM +F+ + V + DDY++YC+YVAGLVG GL++LF
Sbjct: 126 QKLKKEYQDVIANICERMANGMCEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLFARCDF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED + D + SN MGLFLQKTNIIRDY EDI E P RMFWP+EIW YV +L++LK E
Sbjct: 186 EDPSLDDDLTTSNHMGLFLQKTNIIRDYYEDIREEPP-RMFWPKEIWGTYVTELKELKSE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
N+ AVQCLN MV +AL+HV + Y+SALRD ++FRFCAIPQ+MAI TL YNN +
Sbjct: 245 SNNPAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK-------TLSR 359
F+ VK+ R + +++ + + F D+ L+ K++ D ++T + R
Sbjct: 305 FQVKVKVSRPESCRIMLKATTLYSSLSMFRDYCVELQKKLDVQDASSTSIANSLAAAIER 364
Query: 360 VEAIQKACMD 369
++ K C D
Sbjct: 365 IDLQLKKCQD 374
>gi|71407970|ref|XP_806417.1| farnesyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70870160|gb|EAN84566.1| farnesyltransferase, putative [Trypanosoma cruzi]
Length = 404
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 229/348 (65%), Gaps = 6/348 (1%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
+ + ++LY ++++K R+ E I + FCY +L VSRSFA+VI +L ++R+AV
Sbjct: 1 MEYMEELYAMVRMKWRLRRIETGIACNDEDLRFCYDILQAVSRSFAVVIMELDEEMRDAV 60
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHV 125
CIFYLVLRALDTVEDD SIP D K+ L FH H++D W S G + L++++ HV
Sbjct: 61 CIFYLVLRALDTVEDDMSIPVDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHV 120
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
+ A+ LGK YQD I I +RM GM F+ ++VE+ DYD YC+YVAGLVG GL+ L+
Sbjct: 121 TRAYSRLGKAYQDVISGICERMANGMCDFLTRKVETKADYDLYCHYVAGLVGHGLTLLYV 180
Query: 186 ASGTEDLA-PDSLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
+SG ED+ D L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L
Sbjct: 181 SSGLEDVRLADDLTNANHMGLFLQKTNIIRDFYEDICEVPP-RVFWPREIWEKYTDDLHA 239
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
K E + KAV+CLN MV +AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +N
Sbjct: 240 FKDELHEAKAVECLNAMVADALVHVPHVVEYLASLRDPSVFAFSAIPQVMAMATLSLVFN 299
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
N +VF VK RG TA++ + + ++ L ++N D
Sbjct: 300 NKDVFHTKVKTTRGATARIFHYSTELQATLQMLKTYTLRLAARMNAQD 347
>gi|103424267|emb|CAJ76132.2| squalene synthase [Leishmania donovani]
Length = 414
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 236/370 (63%), Gaps = 14/370 (3%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R A+ ++PPE FCY +++ VSRSFA+V+ QL LR+++CIFY
Sbjct: 6 DSVAMMRVKWQMRSAKIRVPPEETDLCFCYDIMNDVSRSFAVVVAQLSDQQLRDSICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P DVK+ L FH H D W S G + L++++ VS F
Sbjct: 66 LVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSREF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L K YQD I +I +RM GM +F+ + V + DDY++YC+YVAGLVG GL++LF
Sbjct: 126 QKLKKEYQDVIANICERMANGMCEFLKRPVITKDDYNQYCHYVAGLVGHGLTQLFARCDF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED + D + SN MGLFLQKTNIIRDY EDI E P RMFWP+EIW YV +L++LK E
Sbjct: 186 EDPSLDDDLTTSNHMGLFLQKTNIIRDYYEDIREEPP-RMFWPKEIWGIYVTELKELKSE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
N+ AVQCLN MV +AL+HV + Y+SALRD ++FRFCAIPQ+MAI TL YNN +
Sbjct: 245 SNNAAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK-------TLSR 359
F+ VK+ R + +++ + + F D+ L+ K++ D ++T + R
Sbjct: 305 FQVKVKVSRPESCRIMLKATTLYSSLSMFRDYCVELQKKLDVQDASSTSIANSLAAAIER 364
Query: 360 VEAIQKACMD 369
++ K C D
Sbjct: 365 IDLQLKKCQD 374
>gi|327288076|ref|XP_003228754.1| PREDICTED: squalene synthase-like [Anolis carolinensis]
Length = 468
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 225/349 (64%), Gaps = 10/349 (2%)
Query: 39 FCYSMLHKVSRSFA-LVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
CY L++ S+++A ++IQ L +LR+AVCIFYLVLRALDTVEDD +I + KVP+L F
Sbjct: 101 LCYRYLYQSSQNYATVIIQTLNGELRDAVCIFYLVLRALDTVEDDVTISLETKVPMLHNF 160
Query: 98 HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H ++Y +W F + K +++ F +S F +L K YQD I DI ++MG GMA+F+ K
Sbjct: 161 HSYLYQPDWRFMDSNDKDKQVLEDFPVISLEFRKLKKVYQDVIADICRKMGLGMAEFLEK 220
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS---LSNSMGLFLQKTNIIRDY 214
+VES +D+D+YC+YVAGLVG+GL +LF AS D D L+NSMG+F QK NIIRDY
Sbjct: 221 KVESEEDWDKYCHYVAGLVGIGLEQLFSASKLVDPVVDQDTELANSMGVFQQKINIIRDY 280
Query: 215 LEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED+ R FWPRE+WSKY + DL EN DK VQCLN+++TNAL H+ D L ++
Sbjct: 281 HEDLL---VGREFWPREVWSKYAKTMSDLAKPENIDKGVQCLNELITNALHHIPDILTHL 337
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
S L++ ++F+FCAIPQ+ I TL YNN +V +G+VK+R+G A ++ N+ V
Sbjct: 338 SQLKNQSVFKFCAIPQVKGIATLVAFYNNPQVLQGLVKIRKGQAATLMMDATNIQAVKAI 397
Query: 335 FYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
+ + + KI DP++++T V +I C L R HYS
Sbjct: 398 TFQYMEEIYQKIPSTDPSSSRTQQIVTSICSMCSPGRTLVPR---THYS 443
>gi|407418933|gb|EKF38258.1| squalene synthase, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 413
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 226/348 (64%), Gaps = 6/348 (1%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
+ + ++LY ++++K R+ E I + FCY +L VSRSFA+VI +L ++R+AV
Sbjct: 10 MEYMEELYAMMRMKWRLRRIETGIACNDDDLRFCYDILQAVSRSFAVVIMELNDEMRDAV 69
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHV 125
CIFYLVLRALDTVEDD S+P D K+ L FH H++D W S G + L++ + HV
Sbjct: 70 CIFYLVLRALDTVEDDMSLPVDFKLRELPTFHEHLHDTTWCMSGVGVGRERELLEHYTHV 129
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
+ A+ L K YQD I I +RM GM +F+ ++VE+ DYD YC+YVAGLVG GL+ L+
Sbjct: 130 TRAYARLNKAYQDVISSICERMANGMCEFLTRKVETKADYDLYCHYVAGLVGHGLTLLYV 189
Query: 186 ASGTEDL-APDSLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
+SG ED+ D L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW Y + L
Sbjct: 190 SSGLEDMRIADDLTNANHMGLFLQKTNIIRDFYEDIREVPP-RVFWPREIWGTYTDDLHA 248
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
K E + KA++CLN MV +AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +N
Sbjct: 249 FKEELHEAKAIECLNAMVADALVHVPYVIEYLASLRDPSVFAFSAIPQVMAMATLSLVFN 308
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
N +VF VK RG TA++ + ++ L ++N D
Sbjct: 309 NKDVFHTKVKTTRGATARIFHYSTEPQAALQMLKTYALRLAARVNAQD 356
>gi|326428914|gb|EGD74484.1| farnesyl-diphosphate farnesyltransferase 1 [Salpingoeca sp. ATCC
50818]
Length = 429
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 230/375 (61%), Gaps = 13/375 (3%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ-----AEKQIPPEPHWAFCYSMLHKVSRSFALVI 55
M +LAA L HP +L+ L+ + + A ++ P C L + SRSF+ VI
Sbjct: 1 MSALAASLTHPTELFQLINFQFFGGKERLFPARAELENTPSMRRCDYYLCRTSRSFSAVI 60
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTK 113
+ L +LR A+ IFYLVLR LDTVEDD S+ +K +L FH +YD +W+F S +
Sbjct: 61 RALDAELRPAISIFYLVLRGLDTVEDDMSLDKKLKHKLLTTFHEKLYDPQWNFDGSGPNE 120
Query: 114 EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVA 173
+ + L+ +FH V+ FL L K +Q I DI KRMG GMA+FI K VE++DDY+ YC+YVA
Sbjct: 121 KDRDLLVEFHVVTQEFLALDKKFQVVIADICKRMGHGMAEFIDKTVETVDDYNLYCHYVA 180
Query: 174 GLVGLGLSKLFYASGTEDL---APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG+GLSKLF ASG E + +NSMGLFLQKTNIIRDYLED+ E R +WPR
Sbjct: 181 GLVGIGLSKLFSASGLESAEVGVDEERANSMGLFLQKTNIIRDYLEDLEE---GRTWWPR 237
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
++WS Y KL D + + CLN +V +AL HV DC YMS LR ++F FCAIPQ
Sbjct: 238 QVWSLYGTKLSDFASPDCEAGGLACLNHLVADALQHVPDCFVYMSRLRTQSVFNFCAIPQ 297
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
+MAI TL LCYNN +V + VK+R+G ++ + ++ +V F +S L+ + D
Sbjct: 298 VMAIATLDLCYNNKQVLKRNVKIRKGTAVSLMMKATSLANVIDIFVSYSKSLQSQGVTTD 357
Query: 351 PNATKTLSRVEAIQK 365
P K S ++ I K
Sbjct: 358 PTYGKLSSTLDTIFK 372
>gi|344281249|ref|XP_003412392.1| PREDICTED: squalene synthase [Loxodonta africana]
Length = 415
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 217/321 (67%), Gaps = 9/321 (2%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDTVEDD +I + KVP+L FH ++Y+ +W F ++ + +++ F +
Sbjct: 67 VCIFYLVLRALDTVEDDMTISVEKKVPMLHNFHSYLYEPDWRFMESKQKDRQVLEDFPTI 126
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
S F +L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS+LF
Sbjct: 127 SLEFRKLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEREWDKYCHYVAGLVGIGLSRLFS 186
Query: 186 ASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
AS ED + D+ L+NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV KL D
Sbjct: 187 ASELEDSVVGEDTELANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVKKLSD 243
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCA+PQ+MAI TLA CYN
Sbjct: 244 FAKPENIDFAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAVPQVMAIATLAACYN 303
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEA 362
N +VF+GVVK+R+G ++ NM V Y + + +I K+DP++ KT +
Sbjct: 304 NQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPKSDPSSNKTRQIIST 363
Query: 363 IQKACMDSGVLNKRFKILHYS 383
I++ + + L R HYS
Sbjct: 364 IRQQNLPTCQLISRS---HYS 381
>gi|332244658|ref|XP_003271491.1| PREDICTED: squalene synthase isoform 3 [Nomascus leucogenys]
gi|332244660|ref|XP_003271492.1| PREDICTED: squalene synthase isoform 4 [Nomascus leucogenys]
gi|332244664|ref|XP_003271494.1| PREDICTED: squalene synthase isoform 6 [Nomascus leucogenys]
Length = 353
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 158/325 (48%), Positives = 215/325 (66%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICRRMGTGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFTKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRTQNLPNCQLISRS---HYS 319
>gi|395842327|ref|XP_003793969.1| PREDICTED: squalene synthase isoform 3 [Otolemur garnettii]
Length = 353
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/325 (48%), Positives = 216/325 (66%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y+ +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYEPDWRFMDSKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+W +YV
Sbjct: 121 RLFSASEFEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWGRYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRAQNLPTCQLISRS---HYS 319
>gi|402877487|ref|XP_003902457.1| PREDICTED: squalene synthase isoform 3 [Papio anubis]
Length = 353
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/325 (48%), Positives = 215/325 (66%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRTQNLPNCQLISRS---HYS 319
>gi|7960271|gb|AAF71269.1| squalene synthase [Citrus sinensis]
Length = 146
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 151 MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI
Sbjct: 1 MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 60
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC
Sbjct: 61 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 120
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGT 296
LKYMSALRDHAIFRFCAIPQIMAIGT
Sbjct: 121 LKYMSALRDHAIFRFCAIPQIMAIGT 146
>gi|426358847|ref|XP_004046702.1| PREDICTED: squalene synthase isoform 3 [Gorilla gorilla gorilla]
gi|426358849|ref|XP_004046703.1| PREDICTED: squalene synthase isoform 4 [Gorilla gorilla gorilla]
gi|426358851|ref|XP_004046704.1| PREDICTED: squalene synthase isoform 5 [Gorilla gorilla gorilla]
Length = 353
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/325 (48%), Positives = 214/325 (65%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFAKPENIDLAVQCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRTQNLPNCQLISRS---HYS 319
>gi|410956526|ref|XP_003984893.1| PREDICTED: squalene synthase [Felis catus]
Length = 353
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/325 (48%), Positives = 218/325 (67%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W + ++ + +++
Sbjct: 1 MRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+WSKYV
Sbjct: 121 RLFSASELEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQEVWSKYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D +N D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRTQNLPNCQLISRS---HYS 319
>gi|221045454|dbj|BAH14404.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 157/325 (48%), Positives = 214/325 (65%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRTQNLPNCQLISRS---HYS 319
>gi|298704820|emb|CBJ48968.1| Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene
synthase; probably two separate ORFs [Ectocarpus
siliculosus]
Length = 691
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 18/365 (4%)
Query: 6 AVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
A L H D+++ L K + + AFC ML KVSRSFA VI+QL L
Sbjct: 289 AQLSHVDEVFAALWFKARGAFSNNLDQEDSDVAFCNDMLGKVSRSFAAVIRQLPKMLATD 348
Query: 66 VCIFYLVLRALDTVEDDTSIPTD--VKVPILIAFHR-HVYDREWHF-SCGTKEYKVLMDQ 121
+ +FYLVLR LDTVEDD + D VK+ +L FH + DR W G + +VL+++
Sbjct: 349 IVVFYLVLRGLDTVEDDMTAFDDIQVKIKLLTKFHETALVDRAWKLEGVGQGDERVLLER 408
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV----ESIDDYDEYCYYVAGLVG 177
F V+ F L +G Q+ I DITKRMGAGMA+F+ K++ S DYDEYC+YVAGLVG
Sbjct: 409 FSSVTAVFQSLSQGSQEVISDITKRMGAGMAEFVSKDLGQGTTSTVDYDEYCHYVAGLVG 468
Query: 178 LGLSKLFYASGTED----LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
GL++LF A+G E LAP+ L+NSMGLFLQKTNIIRDYLED + R FWP+++W
Sbjct: 469 DGLTRLFVATGIEGQELLLAPE-LANSMGLFLQKTNIIRDYLEDYVD---GRAFWPQDVW 524
Query: 234 SKY--VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
K+ +L + + D A+ CLN++VT+AL V DCL YM ++D +FRFCAIPQ+
Sbjct: 525 KKHAKTGQLGEFALPQFRDNALACLNELVTDALALVPDCLAYMRQIKDPEVFRFCAIPQV 584
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDP 351
MAI TLA YNN +VFRGVVK+R+GL ++I + N+ ++ F + + ++ DP
Sbjct: 585 MAIATLAEIYNNPDVFRGVVKIRKGLACRMILESGNLEGIFSWFNKLAEGIAARVPALDP 644
Query: 352 NATKT 356
A++T
Sbjct: 645 CASRT 649
>gi|397467306|ref|XP_003805365.1| PREDICTED: squalene synthase isoform 3 [Pan paniscus]
gi|221039532|dbj|BAH11529.1| unnamed protein product [Homo sapiens]
gi|221040242|dbj|BAH14902.1| unnamed protein product [Homo sapiens]
gi|221045374|dbj|BAH14364.1| unnamed protein product [Homo sapiens]
gi|221046090|dbj|BAH14722.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 157/325 (48%), Positives = 214/325 (65%), Gaps = 9/325 (2%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 177
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 178 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 237
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 238 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 297
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 298 IISTIRTQNLPNCQLISRS---HYS 319
>gi|1389688|gb|AAC17923.1| squalene synthase [Leishmania major]
Length = 414
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/322 (49%), Positives = 216/322 (67%), Gaps = 7/322 (2%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R + Q+PPE FCY +++ VSRSFA+V+ QL LR+A+CIFY
Sbjct: 6 DSVAMMRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P DVK+ L FH H D W S G + L+ ++ VS F
Sbjct: 66 LVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLAKYPCVSREF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L K YQD I +I +RM GM +F+ + V + DDY++YC+YVAGLVG GL++LF G
Sbjct: 126 KKLKKEYQDVIANICERMANGMCEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLFARCGF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED + D + SN MGLFLQKTNIIRDY EDI E P RMFWP+EIW YV +L++LK E
Sbjct: 186 EDPSLDDDLTSSNHMGLFLQKTNIIRDYYEDIREEPP-RMFWPKEIWGTYVTELKELKSE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
N+ AVQCLN MV +AL+HV + Y+SALRD ++FRFCAIPQ+MAI ++ YNN +
Sbjct: 245 SNNAAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIASVKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNM 328
F+ VK+ R + +++ + +
Sbjct: 305 FQVKVKVSRPESCRIMLKATTL 326
>gi|313509744|gb|ADR66120.1| squalene synthase, partial [Eupatorium cannabinum]
Length = 166
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/166 (86%), Positives = 155/166 (93%)
Query: 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLF 184
V+T LEL KGYQ+AIEDIT RMGAGMAKFICKEVES+DDYDEY +YVAGLVGLGLSKLF
Sbjct: 1 VATCLLELKKGYQEAIEDITMRMGAGMAKFICKEVESVDDYDEYXHYVAGLVGLGLSKLF 60
Query: 185 YASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+ASGTE L DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLK
Sbjct: 61 HASGTEKLFSDSMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLK 120
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
YEENS+KA+QCLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 YEENSEKAIQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 166
>gi|335773133|gb|AEH58291.1| squalene synthetase-like protein [Equus caballus]
Length = 349
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 156/321 (48%), Positives = 212/321 (66%), Gaps = 9/321 (2%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F ++ + +++ F +
Sbjct: 1 VCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRFMESKEKDRQVLEDFPTI 60
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFY 185
S F L + YQ I DI ++MG GMA+F+ K V S ++D+YC+YVAGLVG+GLS+LF
Sbjct: 61 SLEFRNLAEKYQTVIVDICRKMGYGMAEFLDKHVTSEREWDKYCHYVAGLVGIGLSRLFS 120
Query: 186 ASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
AS ED L + L +NSMGLFLQKTNIIRDYLED E R FWP+E+WSKYV KL D
Sbjct: 121 ASELEDPLVGEDLERANSMGLFLQKTNIIRDYLEDQRE---GREFWPQEVWSKYVKKLSD 177
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
EN D AVQCLN+++TN L H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYN
Sbjct: 178 FAKPENIDSAVQCLNELITNTLHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYN 237
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEA 362
N +VF+GVVK+R+G ++ NM V Y + + +I +DP++ KT +
Sbjct: 238 NQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPNSDPSSGKTRQIIST 297
Query: 363 IQKACMDSGVLNKRFKILHYS 383
I+ + + L R HYS
Sbjct: 298 IRTQNLPNCQLISRS---HYS 315
>gi|154342744|ref|XP_001567320.1| putative farnesyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064649|emb|CAM42751.1| putative farnesyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 414
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 232/370 (62%), Gaps = 14/370 (3%)
Query: 13 DLYPLLKLKMASRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLG-TDLRNAVCIFY 70
D ++++K R + Q+PPE FCY ++ VSRSFA V+ QL LR+A+CIFY
Sbjct: 6 DSLAMMRVKWQMRSVKLQVPPEEADLRFCYEVMDDVSRSFAAVVAQLADQQLRDAICIFY 65
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAF 129
LVLRALDT+EDD S+P +VK+ + FH + D W + G + L++++ V+ F
Sbjct: 66 LVLRALDTLEDDMSVPVNVKLKEMPKFHTRMSDTNWSMTGVGEGRERELLEKYPCVAREF 125
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
+L K YQD I +I +R+ GM +F+ + V ++DDY+ YC+YVAGLVG GL+ LF G
Sbjct: 126 KKLRKEYQDVIANICERVANGMCEFLQRPVVTLDDYNLYCHYVAGLVGHGLTHLFARCGF 185
Query: 190 EDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
ED D + SN MGLFLQKTNIIRDY EDI + P RMFWP++IWS Y +L+DLK E
Sbjct: 186 EDSHLDEDLTNSNHMGLFLQKTNIIRDYYEDICDEPP-RMFWPKDIWSLYATELKDLKKE 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
NS AVQCLN MV +AL+HV + Y+S L+D ++FRFCAIPQ+MAI TL YNN +
Sbjct: 245 SNSAAAVQCLNAMVADALVHVPYVVDYLSTLQDPSVFRFCAIPQVMAIATLKEVYNNPDT 304
Query: 307 FRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK-------TLSR 359
F VK+ R + +++ +T + F D+ L+ ++ +DP++T + R
Sbjct: 305 FHVKVKVSRPESCRIMLKTTTLYSSLSLFRDYCVELQETLDMDDPSSTSIANSLAAAIER 364
Query: 360 VEAIQKACMD 369
++ K C D
Sbjct: 365 IDMELKKCQD 374
>gi|401021616|gb|AFP89476.1| squalene synthase, partial [Hieracium eriophorum]
Length = 159
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/159 (89%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LLPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021546|gb|AFP89441.1| squalene synthase, partial [Hieracium alpinum]
gi|401021548|gb|AFP89442.1| squalene synthase, partial [Hieracium alpinum]
gi|401021550|gb|AFP89443.1| squalene synthase, partial [Hieracium alpinum]
gi|401021552|gb|AFP89444.1| squalene synthase, partial [Hieracium alpinum]
gi|401021564|gb|AFP89450.1| squalene synthase, partial [Hieracium bracteolatum]
gi|401021648|gb|AFP89492.1| squalene synthase, partial [Hieracium humile]
gi|401021654|gb|AFP89495.1| squalene synthase, partial [Hieracium humile]
gi|401021698|gb|AFP89517.1| squalene synthase, partial [Hieracium olympicum]
gi|401021700|gb|AFP89518.1| squalene synthase, partial [Hieracium olympicum]
gi|401021722|gb|AFP89529.1| squalene synthase, partial [Hieracium pilosum]
gi|401021790|gb|AFP89563.1| squalene synthase, partial [Hieracium transylvanicum]
gi|401021792|gb|AFP89564.1| squalene synthase, partial [Hieracium transylvanicum]
gi|401021794|gb|AFP89565.1| squalene synthase, partial [Hieracium transylvanicum]
gi|401021796|gb|AFP89566.1| squalene synthase, partial [Hieracium transylvanicum]
Length = 159
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/159 (89%), Positives = 152/159 (95%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE+
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEN 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021612|gb|AFP89474.1| squalene synthase, partial [Hieracium eriophorum]
gi|401021672|gb|AFP89504.1| squalene synthase, partial [Hieracium laevigatum]
Length = 159
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/159 (89%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LLPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021572|gb|AFP89454.1| squalene synthase, partial [Hieracium bupleuroides]
gi|401021580|gb|AFP89458.1| squalene synthase, partial [Hieracium bupleuroides]
gi|401021588|gb|AFP89462.1| squalene synthase, partial [Hieracium caesium]
gi|401021604|gb|AFP89470.1| squalene synthase, partial [Hieracium cerinthoides]
gi|401021620|gb|AFP89478.1| squalene synthase, partial [Hieracium glaucum]
gi|401021622|gb|AFP89479.1| squalene synthase, partial [Hieracium glaucum]
gi|401021626|gb|AFP89481.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021628|gb|AFP89482.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021630|gb|AFP89483.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021632|gb|AFP89484.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021636|gb|AFP89486.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021638|gb|AFP89487.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021642|gb|AFP89489.1| squalene synthase, partial [Hieracium heterogynum]
gi|401021644|gb|AFP89490.1| squalene synthase, partial [Hieracium heterogynum]
gi|401021646|gb|AFP89491.1| squalene synthase, partial [Hieracium heterogynum]
gi|401021650|gb|AFP89493.1| squalene synthase, partial [Hieracium humile]
gi|401021652|gb|AFP89494.1| squalene synthase, partial [Hieracium humile]
gi|401021656|gb|AFP89496.1| squalene synthase, partial [Hieracium kittanae]
gi|401021658|gb|AFP89497.1| squalene synthase, partial [Hieracium kittanae]
gi|401021662|gb|AFP89499.1| squalene synthase, partial [Hieracium lachenalii]
gi|401021664|gb|AFP89500.1| squalene synthase, partial [Hieracium lachenalii]
gi|401021668|gb|AFP89502.1| squalene synthase, partial [Hieracium laevigatum]
gi|401021688|gb|AFP89512.1| squalene synthase, partial [Hieracium murorum]
gi|401021690|gb|AFP89513.1| squalene synthase, partial [Hieracium murorum]
gi|401021696|gb|AFP89516.1| squalene synthase, partial [Hieracium olympicum]
gi|401021702|gb|AFP89519.1| squalene synthase, partial [Hieracium pannosum]
gi|401021706|gb|AFP89521.1| squalene synthase, partial [Hieracium pannosum]
gi|401021708|gb|AFP89522.1| squalene synthase, partial [Hieracium petrovae]
gi|401021710|gb|AFP89523.1| squalene synthase, partial [Hieracium petrovae]
gi|401021714|gb|AFP89525.1| squalene synthase, partial [Hieracium pictum]
gi|401021716|gb|AFP89526.1| squalene synthase, partial [Hieracium pictum]
gi|401021724|gb|AFP89530.1| squalene synthase, partial [Hieracium pilosum]
gi|401021726|gb|AFP89531.1| squalene synthase, partial [Hieracium plumulosum]
gi|401021728|gb|AFP89532.1| squalene synthase, partial [Hieracium plumulosum]
gi|401021736|gb|AFP89536.1| squalene synthase, partial [Hieracium porrifolium]
gi|401021742|gb|AFP89539.1| squalene synthase, partial [Hieracium prenanthoides]
gi|401021744|gb|AFP89540.1| squalene synthase, partial [Hieracium prenanthoides]
gi|401021752|gb|AFP89544.1| squalene synthase, partial [Hieracium racemosum]
gi|401021756|gb|AFP89546.1| squalene synthase, partial [Hieracium racemosum]
gi|401021766|gb|AFP89551.1| squalene synthase, partial [Hieracium sabaudum]
gi|401021774|gb|AFP89555.1| squalene synthase, partial [Hieracium sparsum]
gi|401021776|gb|AFP89556.1| squalene synthase, partial [Hieracium sparsum]
gi|401021778|gb|AFP89557.1| squalene synthase, partial [Hieracium sparsum]
gi|401021780|gb|AFP89558.1| squalene synthase, partial [Hieracium sparsum]
gi|401021782|gb|AFP89559.1| squalene synthase, partial [Hieracium stelligerum]
gi|401021784|gb|AFP89560.1| squalene synthase, partial [Hieracium stelligerum]
gi|401021786|gb|AFP89561.1| squalene synthase, partial [Hieracium tomentosum]
gi|401021788|gb|AFP89562.1| squalene synthase, partial [Hieracium tomentosum]
gi|401021814|gb|AFP89575.1| squalene synthase, partial [Hieracium virosum]
gi|401021818|gb|AFP89577.1| squalene synthase, partial [Hieracium virosum]
gi|401021824|gb|AFP89580.1| squalene synthase, partial [Hieracium intybaceum]
Length = 159
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/159 (89%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|313509736|gb|ADR66116.1| squalene synthase, partial [Cichorium intybus]
Length = 159
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 152/159 (95%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASGTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD A+F+FCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAVFKFCAIPQ 159
>gi|342209234|gb|AEL16717.1| squalene synthase-like 3 [Botryococcus braunii]
Length = 383
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 234/369 (63%), Gaps = 7/369 (1%)
Query: 3 SLAAVLRHPDDLYPLLKLK-MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L VL+HP ++ PLL++ MA R+ K P +P+ A+C+ L KVSRS+ LVIQQL
Sbjct: 2 KLREVLQHPGEIIPLLQMMVMAYRRKRK--PQDPNLAWCWETLIKVSRSYVLVIQQLPEV 59
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
L++ +C+ YLVLR LDT++DD +IP + +VP+L+ ++ H+ D W CG +Y L+++
Sbjct: 60 LQDPICVNYLVLRGLDTLQDDMAIPAEKRVPLLLDYYNHIGDITWKPPCGYGQYVELIEE 119
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
+ V+ FL+L K Q I D+ R+GA M F+ ++V ++ D D Y + G V + L+
Sbjct: 120 YPRVTKEFLKLNKQDQQFITDMCMRLGAEMTVFLKRDVLTVPDLDLYAFTNNGPVAICLT 179
Query: 182 KLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
KL+ D L + LS M +FL K N+IRD ED+ E P R++WP+EIW KY+
Sbjct: 180 KLWVDRKFADPKLLDREDLSGHMAMFLGKINVIRDIKEDVLEDPP-RIWWPKEIWGKYLK 238
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
L D+ E +A+ CLND++T+AL H+E CL+YM + D +F+FCA+P++M++ T++
Sbjct: 239 DLRDIIKPEYQKEALACLNDILTDALRHIEPCLQYMEMVWDEGVFKFCAVPELMSLATIS 298
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
+CYNN +VF GVVKMRRG TAK+ NM +Y +F + ++ K + DPN T+
Sbjct: 299 VCYNNPKVFTGVVKMRRGETAKLFLSVTNMPALYKSFSAIAEEMEAKCVREDPNFALTVK 358
Query: 359 RVEAIQKAC 367
R++ +Q C
Sbjct: 359 RLQDVQALC 367
>gi|401021614|gb|AFP89475.1| squalene synthase, partial [Hieracium eriophorum]
Length = 159
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/159 (89%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LLPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021674|gb|AFP89505.1| squalene synthase, partial [Hieracium lawsonii]
Length = 159
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 152/159 (95%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE+
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEN 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021768|gb|AFP89552.1| squalene synthase, partial [Hieracium schmidtii]
gi|401021770|gb|AFP89553.1| squalene synthase, partial [Hieracium schmidtii]
gi|401021772|gb|AFP89554.1| squalene synthase, partial [Hieracium schmidtii]
Length = 159
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L +GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKQGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021660|gb|AFP89498.1| squalene synthase, partial [Hieracium lachenalii]
Length = 159
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDD+DEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDFDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021618|gb|AFP89477.1| squalene synthase, partial [Hieracium glaucum]
Length = 159
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFIC+EVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICREVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021570|gb|AFP89453.1| squalene synthase, partial [Hieracium bracteolatum]
gi|401021610|gb|AFP89473.1| squalene synthase, partial [Hieracium eriophorum]
gi|401021670|gb|AFP89503.1| squalene synthase, partial [Hieracium laevigatum]
Length = 159
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFIC EVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LLPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|328767297|gb|EGF77347.1| hypothetical protein BATDEDRAFT_14137 [Batrachochytrium
dendrobatidis JAM81]
Length = 386
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 228/358 (63%), Gaps = 22/358 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAE-----KQIPPEPH----WAFCYSMLHKVSRSF 51
M +L A HP ++ LLK K S++ IPPE WA CY L+K SRSF
Sbjct: 1 MDALLASAAHPSEVVALLKYKFGSQEKVVHKDLSSIPPESSDQHTWAMCYYFLNKTSRSF 60
Query: 52 ALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SC 110
A VIQ+L +L++ +CIFYLVLR LDT+EDD SIP K+P+L +FH Y + W F C
Sbjct: 61 ARVIQELDKELQDPICIFYLVLRGLDTIEDDMSIPLKTKLPLLESFHEINYKKGWTFHEC 120
Query: 111 G-TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEY 168
G T++ ++L++++ V FL+L YQ I DITKRMGAGMA F+ K+V +++D+D Y
Sbjct: 121 GPTEKDRILLERYDVVIDQFLKLKPKYQKTITDITKRMGAGMADFVSGKKVTTLEDFDLY 180
Query: 169 CYYVAGLVGLGLSKLFYASGTEDLAPDS---LSNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG+GL+ LF SG E A + L+N MGLFLQK NI++DYL DI + R
Sbjct: 181 THYVAGLVGIGLTHLFSDSGLESKALEEHMDLANRMGLFLQKVNILKDYLTDIKD---GR 237
Query: 226 MFWPREIWSKYVNK---LEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
+FWPR++W YV K +E L EN AV CLN + NAL V DCL Y++ L++ ++
Sbjct: 238 LFWPRDVWELYVGKDEGVEALARPENLQNAVACLNHLCANALHLVPDCLDYLALLKNQSV 297
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRG-VVKMRRGLTAKVIDRTNNMTDVYLAFYDFS 339
RF AIPQ+MA+ + +L YNN +F+ K+RRGL K+I ++ + + +++++
Sbjct: 298 LRFAAIPQLMALASFSLFYNNPALFKSHGNKIRRGLAVKLIGKSGDFESIKQVYFNYA 355
>gi|401021540|gb|AFP89438.1| squalene synthase, partial [Pilosella lactucella]
gi|401021544|gb|AFP89440.1| squalene synthase, partial [Pilosella argyrocoma]
gi|401021556|gb|AFP89446.1| squalene synthase, partial [Hieracium amplexicaule]
gi|401021558|gb|AFP89447.1| squalene synthase, partial [Hieracium amplexicaule]
gi|401021606|gb|AFP89471.1| squalene synthase, partial [Hieracium cerinthoides]
gi|401021608|gb|AFP89472.1| squalene synthase, partial [Hieracium cordifolium]
gi|401021624|gb|AFP89480.1| squalene synthase, partial [Hieracium gouanii]
gi|401021640|gb|AFP89488.1| squalene synthase, partial [Hieracium gymnocerinthe]
gi|401021676|gb|AFP89506.1| squalene synthase, partial [Hieracium lawsonii]
gi|401021684|gb|AFP89510.1| squalene synthase, partial [Hieracium mixtum]
gi|401021686|gb|AFP89511.1| squalene synthase, partial [Hieracium mixtum]
gi|401021704|gb|AFP89520.1| squalene synthase, partial [Hieracium pannosum]
gi|401021718|gb|AFP89527.1| squalene synthase, partial [Hieracium pictum]
Length = 159
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021800|gb|AFP89568.1| squalene synthase, partial [Hieracium villosum]
gi|401021802|gb|AFP89569.1| squalene synthase, partial [Hieracium villosum]
gi|401021804|gb|AFP89570.1| squalene synthase, partial [Hieracium villosum]
gi|401021806|gb|AFP89571.1| squalene synthase, partial [Hieracium villosum]
gi|401021808|gb|AFP89572.1| squalene synthase, partial [Hieracium villosum]
gi|401021810|gb|AFP89573.1| squalene synthase, partial [Hieracium villosum]
gi|401021812|gb|AFP89574.1| squalene synthase, partial [Hieracium villosum]
Length = 159
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021568|gb|AFP89452.1| squalene synthase, partial [Hieracium bracteolatum]
gi|401021730|gb|AFP89533.1| squalene synthase, partial [Hieracium pojoritense]
gi|401021746|gb|AFP89541.1| squalene synthase, partial [Hieracium prenanthoides]
gi|401021762|gb|AFP89549.1| squalene synthase, partial [Hieracium sabaudum]
gi|401021798|gb|AFP89567.1| squalene synthase, partial [Hieracium umbellatum]
gi|401021820|gb|AFP89578.1| squalene synthase, partial [Hieracium virosum]
Length = 159
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFIC EVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021738|gb|AFP89537.1| squalene synthase, partial [Hieracium prenanthoides]
gi|401021740|gb|AFP89538.1| squalene synthase, partial [Hieracium prenanthoides]
gi|401021748|gb|AFP89542.1| squalene synthase, partial [Hieracium prenanthoides]
gi|401021750|gb|AFP89543.1| squalene synthase, partial [Hieracium prenanthoides]
Length = 159
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PD +SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDPISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021578|gb|AFP89457.1| squalene synthase, partial [Hieracium bupleuroides]
gi|401021582|gb|AFP89459.1| squalene synthase, partial [Hieracium bupleuroides]
gi|401021586|gb|AFP89461.1| squalene synthase, partial [Hieracium caesium]
gi|401021712|gb|AFP89524.1| squalene synthase, partial [Hieracium petrovae]
gi|401021754|gb|AFP89545.1| squalene synthase, partial [Hieracium racemosum]
gi|401021764|gb|AFP89550.1| squalene synthase, partial [Hieracium sabaudum]
gi|401021822|gb|AFP89579.1| squalene synthase, partial [Hieracium virosum]
Length = 159
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYV+KLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVHKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021566|gb|AFP89451.1| squalene synthase, partial [Hieracium bracteolatum]
gi|401021720|gb|AFP89528.1| squalene synthase, partial [Hieracium pilosum]
Length = 156
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/156 (89%), Positives = 150/156 (96%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE+L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTENLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 156
>gi|401021666|gb|AFP89501.1| squalene synthase, partial [Hieracium lachenalii]
Length = 159
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDD+DEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDFDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWS+YVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSEYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021560|gb|AFP89448.1| squalene synthase, partial [Hieracium bifidum]
gi|401021562|gb|AFP89449.1| squalene synthase, partial [Hieracium bifidum]
gi|401021576|gb|AFP89456.1| squalene synthase, partial [Hieracium bupleuroides]
gi|401021590|gb|AFP89463.1| squalene synthase, partial [Hieracium caesium]
gi|401021594|gb|AFP89465.1| squalene synthase, partial [Hieracium caesium]
gi|401021634|gb|AFP89485.1| squalene synthase, partial [Hieracium gymnocephalum]
gi|401021678|gb|AFP89507.1| squalene synthase, partial [Hieracium lucidum]
gi|401021680|gb|AFP89508.1| squalene synthase, partial [Hieracium lucidum]
gi|401021734|gb|AFP89535.1| squalene synthase, partial [Hieracium pojoritense]
Length = 156
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/156 (89%), Positives = 149/156 (95%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 156
>gi|344302665|gb|EGW32939.1| hypothetical protein SPAPADRAFT_60279 [Spathaspora passalidarum
NRRL Y-27907]
Length = 444
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/383 (43%), Positives = 235/383 (61%), Gaps = 20/383 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA---EKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L L HPD+L +++L + RQ P CY +L K SRSFA VI++
Sbjct: 1 MGKLLEFLLHPDELKAVIQL-LKFRQPLHPHDLTKESPELQRCYYLLTKTSRSFAAVIEE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LR+A+ IFYLVLRALDT+EDD SI +++KVP+L F + ++W F K
Sbjct: 60 LHPELRDAIMIFYLVLRALDTIEDDMSIKSEIKVPLLRTFDEKLNTKDWTFDGNGPNEKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+++ +F + + + L YQD ++DIT +MG GMA +I E VE++ DYD YC
Sbjct: 120 RLVLVEFDKILSIYHGLKPQYQDVVKDITYKMGNGMADYILDENFNLNGVETVKDYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+KL +G D LA D+ SNSMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTKLTVMAGFSDDSLAQDNFEKSNSMGLFLQKTNIIRDYHEDLLD---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDKA-VQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
FWP+EIWSKY +L + + ++A + C+N++V NAL H +DCL Y+S ++D + F
Sbjct: 237 SFWPKEIWSKYTKELPLFHKDASFEQAGLSCINELVLNALSHAKDCLSYLSMVKDPSTFS 296
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MAI TLA YNN +V GVVK+R+G T K+I + V F + ++
Sbjct: 297 FCAIPQVMAIATLAEVYNNRKVLHGVVKIRKGTTCKLILESRTFPGVVAIFRRYIQVINH 356
Query: 345 KINKNDPNATKTLSRVEAIQKAC 367
K + +DPN K + I++ C
Sbjct: 357 KSSVSDPNYLKIGIKCGEIEQFC 379
>gi|401021598|gb|AFP89467.1| squalene synthase, partial [Hieracium canadense]
gi|401021816|gb|AFP89576.1| squalene synthase, partial [Hieracium virosum]
Length = 159
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L K YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKDYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|291231713|ref|XP_002735807.1| PREDICTED: squalene synthetase-like, partial [Saccoglossus
kowalevskii]
Length = 293
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 206/300 (68%), Gaps = 17/300 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE-------PHWAFCYSMLHKVSRSFAL 53
M L +++R P + Y LLK ++ Q+ I P+ P CY+ L + SRSFA
Sbjct: 1 MDFLRSIVR-PGETYALLKFRLGRCQS---IIPKLDYNLMTPSAKQCYNYLSQTSRSFAA 56
Query: 54 VIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTK 113
VIQ L DLR+AVCIFYLVLRALDTVEDD +IP D K+P+L AF++++ + EW F +
Sbjct: 57 VIQALEGDLRHAVCIFYLVLRALDTVEDDMTIPLDRKIPMLKAFYKYLNEPEWRFMESQE 116
Query: 114 EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVA 173
+ K++++ F +S F L YQD I DI + MGAGM ++ KEV + D+DEYC+YVA
Sbjct: 117 KDKIVLEDFPTISAEFRSLDPIYQDVIRDICREMGAGMTLYLQKEVLTNADWDEYCHYVA 176
Query: 174 GLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG+GLS+LF AS ED + D+ LSNSMGLFLQKTNIIRDYLEDI E R FWP+
Sbjct: 177 GLVGIGLSRLFSASKLEDKVVGEDTYLSNSMGLFLQKTNIIRDYLEDILE---GRKFWPK 233
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
E WSKY LEDLK E+ +K+V CLND+VTNAL HV D L+YMS + + ++F FCAIPQ
Sbjct: 234 ETWSKYTENLEDLKKSEHFEKSVNCLNDLVTNALKHVPDVLQYMSRIHNQSVFNFCAIPQ 293
>gi|340055737|emb|CCC50058.1| putative farnesyltransferase, partial [Trypanosoma vivax Y486]
Length = 379
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 224/352 (63%), Gaps = 21/352 (5%)
Query: 18 LKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALD 77
L L + S + E FCY +L VSRSFALVI QL ++LR+AVC+FYL+LRALD
Sbjct: 21 LALNLYSGKCNGVNSAESDLCFCYDVLQDVSRSFALVIMQLCSELRDAVCVFYLILRALD 80
Query: 78 TVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAFLELGKGY 136
T+EDD ++ + K+ L FH H+ D EW+ + GT + L+ QF HVS AF LGK Y
Sbjct: 81 TIEDDMNLSVEFKLAELPQFHMHLQDPEWNMCNAGTGRERDLLIQFPHVSAAFSRLGKPY 140
Query: 137 QDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAP 194
QD I DI +RM GM +F+ K+V + DYD YC+YVAGLVG GL++L+ SG ED L
Sbjct: 141 QDVISDICERMAKGMCEFLTKKVVTRADYDLYCHYVAGLVGHGLTRLYVLSGLEDPQLGK 200
Query: 195 D-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK------YEE 247
D +L+N MGL LQKTNI+RD+ ED+NE P R+FWP+EIW KY + L+ K ++
Sbjct: 201 DLALANHMGLMLQKTNIVRDFHEDMNESPP-RVFWPQEIWGKYTSDLDAFKNIECDARDD 259
Query: 248 NSD-------KAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
NSD +A+ CLN MV +AL+H+ ++Y+++L + + F F AIPQ+MAI TLA+
Sbjct: 260 NSDDGRGSKEQALGCLNAMVADALVHLPPVVEYLASLHNPSTFAFSAIPQVMAIATLAIV 319
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
NN +VFR VK+ RG T +I ++ + + +L +N+ DPN
Sbjct: 320 LNNADVFRRKVKLTRGTTCLIIHQSTELLSALALMKTQAQLL---LNRADPN 368
>gi|401021732|gb|AFP89534.1| squalene synthase, partial [Hieracium pojoritense]
Length = 159
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/159 (88%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFIC EVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYV+KLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVHKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 159
>gi|313509746|gb|ADR66121.1| squalene synthase, partial [Arnica montana]
Length = 156
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/156 (89%), Positives = 149/156 (95%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASGTE L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEILFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLK EENS+KA+Q
Sbjct: 61 DSMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKSEENSEKAIQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSDLRDPAIFRFCAIPQ 156
>gi|401021682|gb|AFP89509.1| squalene synthase, partial [Hieracium mixtum]
Length = 159
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/159 (88%), Positives = 151/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L KGYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE+
Sbjct: 1 LKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEN 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LK EENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKCEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 159
>gi|401021554|gb|AFP89445.1| squalene synthase, partial [Hieracium amplexicaule]
gi|401021592|gb|AFP89464.1| squalene synthase, partial [Hieracium caesium]
gi|401021694|gb|AFP89515.1| squalene synthase, partial [Hieracium naegelianum]
Length = 156
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/156 (89%), Positives = 148/156 (94%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFIC EVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 156
>gi|401021542|gb|AFP89439.1| squalene synthase, partial [Pilosella onegensis]
gi|401021758|gb|AFP89547.1| squalene synthase, partial [Hieracium ramondii]
gi|401021760|gb|AFP89548.1| squalene synthase, partial [Hieracium recoderi]
Length = 156
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/156 (89%), Positives = 149/156 (95%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 156
>gi|313509756|gb|ADR66126.1| squalene synthase, partial [Hieracium umbellatum]
gi|401021692|gb|AFP89514.1| squalene synthase, partial [Hieracium naegelianum]
Length = 156
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 139/156 (89%), Positives = 149/156 (95%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYV+KLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVHKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 156
>gi|401021536|gb|AFP89436.1| squalene synthase, partial [Hispidella hispanica]
gi|401021538|gb|AFP89437.1| squalene synthase, partial [Hispidella hispanica]
Length = 159
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L K YQ+AIEDIT RMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKDYQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS LRD AIF+FCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELRDPAIFKFCAIPQ 159
>gi|167536234|ref|XP_001749789.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771716|gb|EDQ85378.1| predicted protein [Monosiga brevicollis MX1]
Length = 475
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 228/382 (59%), Gaps = 15/382 (3%)
Query: 3 SLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE------PHWAFCYSMLHKVSRSFALVIQ 56
+LA L HP +++ L+ ++ + E+ PP + CY L K SRSF+ VI+
Sbjct: 65 NLARSLVHPSEIFSLVNFQLLGGK-ERLFPPNDQTEETANMQRCYYWLDKTSRSFSAVIK 123
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY 115
L D+R AVCIFYLVLR LDTVEDD S+ ++K +L +FH +++ W F G +E
Sbjct: 124 ALHPDIRRAVCIFYLVLRGLDTVEDDMSLDENIKKDLLKSFHDKLFEPGWTFKGIGPQEK 183
Query: 116 -KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAG 174
+ L+ +F V FL L Y + I DI K+MGAGM KF K+VE++D Y+ YC+YVAG
Sbjct: 184 DRQLLVEFDVVIAEFLRLETKYSEVIADICKKMGAGMIKFAHKQVETVDHYNLYCHYVAG 243
Query: 175 LVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG+GLS+LF S E + D SNSMGLFLQKTNIIRDY ED+ + R +WP +
Sbjct: 244 LVGIGLSRLFSVSNLESEMVGKDVECSNSMGLFLQKTNIIRDYHEDLVD---GRTWWPHQ 300
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWS Y KL D ++ ++CLN +V +AL V + KYMS L+D +IF FCAIPQ+
Sbjct: 301 IWSLYAGKLGDFVEPQHEAAGLKCLNHLVADALDLVPEVFKYMSRLQDQSIFNFCAIPQV 360
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDP 351
MAI TL+LCYNN V VK+R+G +++ R NMT Y F + LK + ND
Sbjct: 361 MAIATLSLCYNNRNVLHRNVKIRKGQAVQLMMRATNMTAFYEIFEEHCLELKARAPSNDT 420
Query: 352 NATKTLSRVEAIQKACMDSGVL 373
L R+ ++ A G L
Sbjct: 421 RTHHALDRILSLINAQRTKGAL 442
>gi|401021602|gb|AFP89469.1| squalene synthase, partial [Hieracium candidum]
Length = 155
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/155 (89%), Positives = 148/155 (95%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L PD
Sbjct: 1 YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
S+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQC
Sbjct: 61 SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 120
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
LNDMVTNAL+H+EDCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 LNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQ 155
>gi|401021596|gb|AFP89466.1| squalene synthase, partial [Hieracium canadense]
Length = 159
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/159 (88%), Positives = 149/159 (93%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L K YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE
Sbjct: 1 LKKDYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEK 60
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L PDS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+K
Sbjct: 61 LFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEK 120
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
AVQCLNDMVTNAL+H+EDCLKYMS L D AIFRFCAIPQ
Sbjct: 121 AVQCLNDMVTNALIHIEDCLKYMSELHDPAIFRFCAIPQ 159
>gi|313509754|gb|ADR66125.1| squalene synthase, partial [Pilosella lactucella]
Length = 156
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/156 (88%), Positives = 149/156 (95%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L P
Sbjct: 1 GYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H++DCLKYMS +RD AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIDDCLKYMSEMRDPAIFRFCAIPQ 156
>gi|401021600|gb|AFP89468.1| squalene synthase, partial [Hieracium candidum]
Length = 155
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/155 (89%), Positives = 149/155 (96%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE+L PD
Sbjct: 1 YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTENLFPD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
S+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQC
Sbjct: 61 SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 120
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
LNDMVTNAL+H++DCLKYMS LRD AIFRFCAIPQ
Sbjct: 121 LNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQ 155
>gi|313509730|gb|ADR66113.1| squalene synthase, partial [Artemisia campestris]
Length = 160
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 150/159 (94%)
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
L +GYQ+AIEDIT RMGAGMAKFICKEVE++DDYDEYC+YVAGLVG+GLSKLF++SGTE
Sbjct: 2 LKRGYQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHSSGTEI 61
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
L DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLKYEENS+K
Sbjct: 62 LFSDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEK 121
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
A QCLNDMVTNAL+H+EDCLKYMS L+D AIFRFCAIPQ
Sbjct: 122 ATQCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQ 160
>gi|401021574|gb|AFP89455.1| squalene synthase, partial [Hieracium bupleuroides]
Length = 156
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/156 (88%), Positives = 147/156 (94%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L P
Sbjct: 1 AYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQ
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS L D AIFRFCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSELHDPAIFRFCAIPQ 156
>gi|401021584|gb|AFP89460.1| squalene synthase, partial [Hieracium bupleuroides]
Length = 155
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/155 (89%), Positives = 147/155 (94%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L PD
Sbjct: 1 YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
S+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQC
Sbjct: 61 SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 120
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
LNDMVTNAL+H+EDCLKYMS L D AIFRFCAIPQ
Sbjct: 121 LNDMVTNALIHIEDCLKYMSELHDPAIFRFCAIPQ 155
>gi|313509770|gb|ADR66133.1| squalene synthase, partial [Hispidella hispanica]
Length = 155
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/155 (87%), Positives = 148/155 (95%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ+AIEDIT RMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGLSKLF+A GTE L PD
Sbjct: 1 YQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
S+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLE+LKYEENS+KAVQC
Sbjct: 61 SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 120
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
LNDMVTNAL+H+E+CLKYMS LRD AIF+FCAIPQ
Sbjct: 121 LNDMVTNALIHIENCLKYMSELRDPAIFKFCAIPQ 155
>gi|448097601|ref|XP_004198715.1| Piso0_002102 [Millerozyma farinosa CBS 7064]
gi|359380137|emb|CCE82378.1| Piso0_002102 [Millerozyma farinosa CBS 7064]
Length = 447
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 231/384 (60%), Gaps = 20/384 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQL 58
MG L ++ HP +L +L+ K+ + + A+CY ML SRSFA VI++L
Sbjct: 1 MGKLVQLISHPSELRAVLQYKLFRKPVHENDGKYKSEELAYCYYMLGCTSRSFAAVIKEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYK 116
+LR+A+ IFYLVLRALDTVEDD ++ +D KVP+L FH ++ +EW F S ++ +
Sbjct: 61 EPELRDAIMIFYLVLRALDTVEDDMTLSSDFKVPLLREFHHNLKLKEWSFDGSGPNEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
+++ F+ + + + L YQD I+DIT RMG GMA +I E V +I DYD YC+
Sbjct: 121 IVLVHFNSILSVYHSLKPIYQDIIKDITDRMGNGMADYILDEEFNMNGVATIKDYDLYCH 180
Query: 171 YVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YVAGLVG GL+KL + D L D S SMGLFLQKTNIIRDY ED+ + R
Sbjct: 181 YVAGLVGEGLTKLMVEAEFADASLTKDGFVKSESMGLFLQKTNIIRDYEEDLRD---GRS 237
Query: 227 FWPREIWSKYVNKLEDL---KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283
FWP+EIWSKY + L K E+ K ++C+N++V NAL HV+DCL ++S + D + F
Sbjct: 238 FWPKEIWSKYTDSLPSFREDKSPESEKKGLECINELVLNALHHVKDCLTFLSLVNDPSCF 297
Query: 284 RFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILK 343
FCAIPQ+MAI TLAL YNN +V R VK+R+G T +I ++ V F + +
Sbjct: 298 NFCAIPQVMAIATLALVYNNPKVLRQNVKIRKGTTCNLILKSRTFPGVVEIFRSYVRDIH 357
Query: 344 PKINKNDPNATKTLSRVEAIQKAC 367
+ +DPN K I++ C
Sbjct: 358 HNSSVSDPNYLKIGIICGEIEQFC 381
>gi|260950059|ref|XP_002619326.1| hypothetical protein CLUG_00485 [Clavispora lusitaniae ATCC 42720]
gi|238846898|gb|EEQ36362.1| hypothetical protein CLUG_00485 [Clavispora lusitaniae ATCC 42720]
Length = 448
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 230/393 (58%), Gaps = 40/393 (10%)
Query: 1 MGSLAAVLRHPDDL-------------YPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKV 47
MG L +L HP +L YPL LK A +K CY L
Sbjct: 1 MGKLLQLLAHPTELRAAVQYFCFKSSMYPL-DLKNAPESLKK----------CYVFLKLT 49
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
SRSFA VI++L +LR+AV IFYLVLRALDTVEDD +I +VKVP+L +FH + ++W+
Sbjct: 50 SRSFAAVIEELHPELRDAVMIFYLVLRALDTVEDDMTIDPNVKVPLLRSFHEKLSLKDWN 109
Query: 108 FSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------V 159
F K +++ +FHH+ T F +L YQD ++ ITK+MG GMA +I E +
Sbjct: 110 FDGNGPNEKDRIVLVEFHHILTEFHKLRPEYQDIVKKITKKMGNGMADYILDENFNTNGL 169
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLF----YASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
E++ D+D YC+YVAGLVG GLS L +A LS SMGLFLQKTNIIRDY
Sbjct: 170 ETVKDFDLYCHYVAGLVGEGLSDLLVLARFADNQVQAENYRLSESMGLFLQKTNIIRDYH 229
Query: 216 EDINEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED+ + R F+PREIWSKY + L + K E +K V+C+ND+V NAL HV D L Y+
Sbjct: 230 EDLED---GRSFYPREIWSKYTDSLPNFFKKPEEREKGVECINDLVLNALNHVIDVLTYL 286
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
S +R+ F FCAIPQ+MAI TLA YNN +V VK+R+G T K+I + + V
Sbjct: 287 SLIRESTSFNFCAIPQVMAIATLAEIYNNKKVLETNVKIRKGTTCKLILNSRTLPGVVDI 346
Query: 335 FYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
F + ++ K + DPN K ++ I++ C
Sbjct: 347 FRHYVRVINHKSDVRDPNYLKIGIKLGEIEQFC 379
>gi|354548137|emb|CCE44873.1| hypothetical protein CPAR2_406760 [Candida parapsilosis]
Length = 444
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/382 (43%), Positives = 234/382 (61%), Gaps = 19/382 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQL 58
MG +L HPD+L +++L RQ P P CY +L+ SRSFA VI++L
Sbjct: 1 MGKFLQLLLHPDELKSVIQL-TGFRQPLHPAPASQSPALKRCYELLNLTSRSFAAVIEEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY-K 116
+LR+A+ IFYLVLRALDT+EDD SI ++KVP+L F+ + ++W F G KE +
Sbjct: 60 HPELRDAIMIFYLVLRALDTIEDDMSIDPEIKVPLLRGFYEKLDSKDWTFDGNGPKEKDR 119
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
V++ +F + + L YQ+ I+DIT++MG GMA +I E VE+I+DY+ YC+
Sbjct: 120 VVLVEFDQILDIYHGLKPQYQNIIKDITRKMGNGMADYILDENFNLNGVETIEDYNLYCH 179
Query: 171 YVAGLVGLGLSKLFYAS--GTEDLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YVAGLVG GL+KL + E L D+ SNSMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 YVAGLVGEGLTKLMVLAKFSDESLVEDNFEKSNSMGLFLQKTNIIRDYHEDLLD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSD-KAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRF 285
FWP+E+WSKY L ++ + + + C+ND+V NAL HV+ L+++S ++D + F F
Sbjct: 237 FWPKEVWSKYTPDLPQFHKNKSMEFEGLSCINDLVLNALGHVKHVLEFLSLVKDPSTFSF 296
Query: 286 CAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPK 345
CAIPQ+MAI TLA YNN +V GVVK+R+G T K+I + V F + ++ K
Sbjct: 297 CAIPQVMAIATLAEVYNNPKVLHGVVKIRKGTTCKLILESRTYPGVVKIFRHYIQVINHK 356
Query: 346 INKNDPNATKTLSRVEAIQKAC 367
+ DPN K + I++ C
Sbjct: 357 SSVRDPNYLKIGIKCGEIEQFC 378
>gi|158389697|gb|ABW37701.1| squalene synthase [Panax notoginseng]
Length = 153
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 133/153 (86%), Positives = 145/153 (94%)
Query: 78 TVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQ 137
TVEDDTSI T+VKVPIL+AFHRH+YD +WHFSCGTKEYKVLMD+FHHVS AFL+LG GY+
Sbjct: 1 TVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLDLGSGYK 60
Query: 138 DAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
+AIEDIT RMGAGM+KFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASG EDLA DSL
Sbjct: 61 EAIEDITMRMGAGMSKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSL 120
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPR
Sbjct: 121 SNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR 153
>gi|384488259|gb|EIE80439.1| farnesyl-diphosphate farnesyltransferase [Rhizopus delemar RA
99-880]
Length = 378
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 222/362 (61%), Gaps = 20/362 (5%)
Query: 8 LRHPDDLYPLLKLKMASR-----QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD- 61
+ P++L L + K A + + ++ + + CY L+ SRSFA VIQ+L D
Sbjct: 9 ITRPEELVALYQYKFAPKTDAQIRLQQTLAKDASKKRCYDFLNMTSRSFAAVIQELEPDE 68
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLM 119
+R+A+C+FYLVLR LDT+EDD ++P D KV +L +F + +Y + W F S ++ + L+
Sbjct: 69 VRDAICLFYLVLRGLDTIEDDMTLPLDRKVELLRSFDKIIYKKGWTFNESGPNEKDRELL 128
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVA 173
QF V FL L YQ IE+ITK MG GMA + E V ++ D+D YC+YVA
Sbjct: 129 VQFDVVIDEFLRLKPQYQSVIENITKLMGNGMADYATGEHRENTSVATVKDFDLYCHYVA 188
Query: 174 GLVGLGLSKLFYASGTE--DLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG GLS +F ASG E +LA + +SNSMGLFLQKTNIIRDY ED+++ R FWP+
Sbjct: 189 GLVGYGLSDIFSASGYELKELAEEKKISNSMGLFLQKTNIIRDYREDLDD---GRQFWPK 245
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
EIW KY + + EN KA CLNDMV N L HV D L Y+S L+ IF FCAIPQ
Sbjct: 246 EIWGKYAEEFSEFTKAENQLKAKYCLNDMVLNVLNHVPDVLTYLSKLQTRPIFMFCAIPQ 305
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
+MAI TLAL +NN+++++ +K+R+G K+I +M +V F + + K D
Sbjct: 306 VMAIATLALVFNNLDIYQRNIKIRKGEAVKLILECTSMDNVIAVFRKYVFEIAKKNEACD 365
Query: 351 PN 352
PN
Sbjct: 366 PN 367
>gi|342209230|gb|AEL16715.1| squalene synthase-like 1 [Botryococcus braunii]
Length = 403
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 217/375 (57%), Gaps = 6/375 (1%)
Query: 2 GSLAAVLRHPDDLYPLLKLKMASRQAEK-QIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
G + +++HP++ LL+L + + IP EP AFCY+ LH VS+ F + +L
Sbjct: 8 GVMKDLVKHPNEFPYLLQLAATTYGSPAAPIPKEPDRAFCYNTLHTVSKGFPRFVMRLPQ 67
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+L++ +CIFYL+LRALDTVEDD ++ ++ K+ +L FH H DR W Y LM+
Sbjct: 68 ELQDPICIFYLLLRALDTVEDDMNLKSETKISLLRVFHEHCSDRNWSMKSDYGIYADLME 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+F V + +L Q + K MG GMA FI K++ ++D+YD YC+YVAG G+ +
Sbjct: 128 RFPLVVSVLEKLPPATQQTFRENVKYMGNGMADFIDKQILTVDEYDLYCHYVAGSCGIAV 187
Query: 181 SKLFYASGTEDLAPDS--LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+K+ DS SNS+GL LQK NII DY EDINE P+ RMFWP+EIW KY
Sbjct: 188 TKVIVQFNLATPEADSYDFSNSLGLLLQKANIITDYNEDINEEPRPRMFWPQEIWGKYAE 247
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AV+CLN MVT+A+ H+E LK M D +FR A+ + A G L+
Sbjct: 248 KLADFNEPENIDTAVKCLNHMVTDAMRHIEPSLKGMVYFTDKTVFRALALLLVTAFGHLS 307
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINK---NDPNATK 355
YNN VF+ V+ R+G A+++ + N+ ++ +N + + + NDP
Sbjct: 308 TLYNNPNVFKEKVRQRKGRIARLVMSSRNVPGLFRTCLKLANNFESRCKQETANDPTVAM 367
Query: 356 TLSRVEAIQKACMDS 370
T+ R+++IQ C D
Sbjct: 368 TIKRLQSIQATCRDG 382
>gi|327281749|ref|XP_003225609.1| PREDICTED: squalene synthase-like [Anolis carolinensis]
Length = 321
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/324 (46%), Positives = 204/324 (62%), Gaps = 10/324 (3%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA----EKQIPPEPHWAFCYSMLHKVSRSFALVIQ 56
M L L HP +LY L KM + P + CY LH+ RSFA VIQ
Sbjct: 1 MEVLKKWLGHPKELYNLAWFKMGGYTTVMPKMDEDPLSESLSLCYKYLHQTGRSFAPVIQ 60
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK 116
L D+ + VCIFYLVLRALDTVEDD +I + K+PIL FH ++Y EW F + K
Sbjct: 61 ILDKDVCHVVCIFYLVLRALDTVEDDMTISLETKIPILQKFHSYLYQPEWRFMGSNDKDK 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLV 176
+++ F +S F +L K YQD DI ++G G+A+F+ K+VES+ ++D+YCYY GL
Sbjct: 121 QVLEDFQTISLEFWKLKKVYQDVFADICSKVGFGLAEFLEKKVESVKEWDKYCYYGTGLA 180
Query: 177 GLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
+G S++F S ED + D L S+G FLQKTNIIRDY ED R FWPRE+W
Sbjct: 181 FVGFSQIFSGSKLEDPVIGQDMELVLSLGFFLQKTNIIRDYYED---QLVGREFWPREVW 237
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKY KL DL EN +KAVQC+N+++ NAL HV + L ++S +++ ++F F AI Q+MA
Sbjct: 238 SKYAKKLSDLAKPENINKAVQCMNELIINALHHVPNILTFLSRVKNQSVFNFYAIAQVMA 297
Query: 294 IGTLALCYNNIEVFRGVVKMRRGL 317
I TLA C NN +VF+GVVK+++GL
Sbjct: 298 IATLAACCNNPQVFQGVVKIQKGL 321
>gi|296221613|ref|XP_002756813.1| PREDICTED: squalene synthase isoform 3 [Callithrix jacchus]
Length = 374
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 225/385 (58%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY+ L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYTYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F+ +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFT-ESKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 142 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN + AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFAKPENIELAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VFRGVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFRGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRTQNLPNCQLISRS---HYS 340
>gi|241952052|ref|XP_002418748.1| farnesyl-diphosphate farnesyltransferase, putative; fpp:fpp
farnesyltransferase, putative; squalene synthetase,
putative [Candida dubliniensis CD36]
gi|223642087|emb|CAX44053.1| farnesyl-diphosphate farnesyltransferase, putative [Candida
dubliniensis CD36]
Length = 448
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 234/384 (60%), Gaps = 21/384 (5%)
Query: 1 MGS-LAAVLRHPDDLYPLLKLKMASRQA---EKQIPPEPHWAFCYSMLHKVSRSFALVIQ 56
MGS L +L HP++L +++L RQ + + CY +L+ SRSFA VI+
Sbjct: 1 MGSKLLQLLLHPNELKAVIQL-FGFRQPLHPRTKDVNDKELIRCYELLNLTSRSFAAVIE 59
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK 116
+L +LR+AV IFYLVLRALDT+EDD ++ +K+P+L F + ++W F K
Sbjct: 60 ELHPELRDAVMIFYLVLRALDTLEDDMTVKPSIKIPLLREFDTKLNTKDWTFDGNGPNEK 119
Query: 117 --VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEY 168
+++ +F+++ F L YQD I+DIT +MG GMA++I E V +IDDY+ Y
Sbjct: 120 DRIVLIEFNNILNVFHRLKPQYQDIIKDITYKMGNGMAEYILDEEFNVNGVATIDDYNLY 179
Query: 169 CYYVAGLVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKC 224
C+YVAGLVG GL+ LF + G + L ++ + SMGLFLQKTNIIRDY ED+ +
Sbjct: 180 CHYVAGLVGEGLTNLFVLASFGDKTLTENNFAKAESMGLFLQKTNIIRDYHEDLQD---G 236
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKA-VQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283
R FWPREIWSKY L+D + + A V C+N++V NAL HV DCL Y+S ++D + F
Sbjct: 237 RSFWPREIWSKYTENLQDFHKDPSKKFAGVSCINELVLNALSHVTDCLDYLSLVKDPSSF 296
Query: 284 RFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILK 343
FCAIPQ+MA+ TLA YNN +V GVVK+R+G T K+I + + V F + ++
Sbjct: 297 SFCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCKLILESRTLPGVIKIFKQYIQVIN 356
Query: 344 PKINKNDPNATKTLSRVEAIQKAC 367
K + DPN K + I++ C
Sbjct: 357 HKSSVKDPNYLKIGIKCGEIEQYC 380
>gi|313509772|gb|ADR66134.1| squalene synthase, partial [Andryala pinnatifida]
Length = 154
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/154 (87%), Positives = 146/154 (94%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ+AIEDIT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+A GTE L PD
Sbjct: 1 YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
S+SNSMGLFLQKTNIIRDYLEDINEIPK RMFWPREIWS+YVNKL++LKYEENS+KAVQC
Sbjct: 61 SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSEYVNKLKELKYEENSEKAVQC 120
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
LNDMVTNAL+H+E+CLKYMS LRD IFRFCAIP
Sbjct: 121 LNDMVTNALIHIENCLKYMSELRDPPIFRFCAIP 154
>gi|403307505|ref|XP_003944233.1| PREDICTED: squalene synthase isoform 2 [Saimiri boliviensis
boliviensis]
Length = 374
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 224/385 (58%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F+ +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHTFLYQPDWRFT-ESKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 142 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRTQNLPNCQLISRS---HYS 340
>gi|313509726|gb|ADR66111.1| squalene synthase, partial [Aster amellus]
Length = 156
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/156 (87%), Positives = 146/156 (93%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AIE+IT RMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASGTE L P
Sbjct: 1 GYQEAIENITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEKLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMGLFLQKTNIIRDYLEDINE PK RMFWPREIWSKYVNKLEDLKYEENS+KA Q
Sbjct: 61 DSISNSMGLFLQKTNIIRDYLEDINEXPKSRMFWPREIWSKYVNKLEDLKYEENSEKAXQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS L D AIF+F AIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSELCDPAIFKFWAIPQ 156
>gi|313509728|gb|ADR66112.1| squalene synthase, partial [Artemisia campestris]
Length = 155
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 133/155 (85%), Positives = 146/155 (94%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ+AIEDIT MGAGMAKFICKEVE++DDYDEYC+YVAGLVG+GLSKLF++SGTE L D
Sbjct: 1 YQEAIEDITMTMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHSSGTEILFSD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
S+SNSMGLFLQKTNIIRDYLEDINEIPK R+FWPREIWSKYVNKLEDLKYEENS+KA QC
Sbjct: 61 SISNSMGLFLQKTNIIRDYLEDINEIPKSRVFWPREIWSKYVNKLEDLKYEENSEKATQC 120
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
LNDMVTNAL+H+EDCLKYMS L+D AIFRFCAIPQ
Sbjct: 121 LNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQ 155
>gi|50420093|ref|XP_458579.1| DEHA2D02552p [Debaryomyces hansenii CBS767]
gi|49654246|emb|CAG86711.1| DEHA2D02552p [Debaryomyces hansenii CBS767]
Length = 447
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 240/413 (58%), Gaps = 41/413 (9%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--------CYSMLHKVSRSFA 52
MG +L HP +L +++L M RQ P P A CY +L+ SRSFA
Sbjct: 1 MGKFVQLLSHPTELKAVIQL-MYFRQ-----PLHPQGASSQSQASKRCYELLNITSRSFA 54
Query: 53 LVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGT 112
VIQ+L +LR+AV +FYL+LRALDTVEDD +I ++KVP+L FH + +EW F +
Sbjct: 55 AVIQELHPELRDAVMLFYLILRALDTVEDDMTIEPEIKVPLLRTFHDKLNLKEWSFDGNS 114
Query: 113 KEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDD 164
K K ++ +F + T + +L + YQD I+ ITK MG GMA +I + V ++ +
Sbjct: 115 KTEKDRCVLVEFPCILTEYHKLKEDYQDIIKHITKEMGNGMADYILDDNFNVNGVATVRE 174
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINE 220
YD YC+YVAGLVG GL+KL +G D L+ D+ S SMGLFLQKTNIIRDY ED+ +
Sbjct: 175 YDLYCHYVAGLVGEGLTKLMVLAGFSDNSLSQDNFAKSESMGLFLQKTNIIRDYHEDLED 234
Query: 221 IPKCRMFWPREIWSKYVNKLEDLKYE---ENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
R FWP+EIW K+ + L + E+ + C+N++V NAL HV+D L Y+S +
Sbjct: 235 ---GRSFWPKEIWEKHTSSLPSFHKDTSLESQGHGLACINELVLNALCHVKDVLTYLSLV 291
Query: 278 RDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYD 337
RD + F FCAIPQ+MAI TLAL YNN V G VK+R+G T +I + + V F
Sbjct: 292 RDPSCFNFCAIPQVMAISTLALVYNNPNVLHGNVKIRKGTTCGLILNSRTLPGVVKIFKH 351
Query: 338 FSNILKPKINKNDPNATKTLSRVEAIQKAC---------MDSGVLNKRFKILH 381
+ ++ K + DPN K + I++ C + GV+ ++ +I H
Sbjct: 352 YVQVINHKSSVQDPNYLKIGIKCGEIEQFCELMYPSEYAIPKGVVKQKQEINH 404
>gi|254576857|ref|XP_002494415.1| ZYRO0A00924p [Zygosaccharomyces rouxii]
gi|238937304|emb|CAR25482.1| ZYRO0A00924p [Zygosaccharomyces rouxii]
Length = 439
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 227/373 (60%), Gaps = 19/373 (5%)
Query: 7 VLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
+L HP +L LKLK + A + I P CY +L SRSFA VIQ+L +LR+
Sbjct: 7 LLSHPVELKSALKLKFIRQPLYAPRDIA-SPELTRCYELLKATSRSFAAVIQELNPELRD 65
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF---SCGTKEYKVLMDQ 121
AV +FYL+LRALDTVEDD +I +KV +L +F + R+W F S K+ KVL+ +
Sbjct: 66 AVMLFYLILRALDTVEDDMTIEPQLKVKVLRSFAEKLDTRDWSFDGNSPEEKDRKVLV-E 124
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGL 175
F + + EL Y+ I+DIT +MG GMA +I E V+++ DYD YC+YVAGL
Sbjct: 125 FPCILHQYHELRPKYRQVIQDITVKMGNGMADYILDEQFNLQGVQTVKDYDLYCHYVAGL 184
Query: 176 VGLGLSKLFYASG--TEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG GL+ L +G T DL A L SMGLFLQKTNIIRDY ED+ + R FWPREI
Sbjct: 185 VGEGLTHLIVEAGFGTPDLDANPQLYESMGLFLQKTNIIRDYAEDLGD---GRSFWPREI 241
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIM 292
WSKY KL DL N+ + C+N++V NAL HV D Y+S++ + + F+FCAIPQ+M
Sbjct: 242 WSKYAEKLPDLGDPRNAQNGLSCINELVLNALSHVIDVFTYLSSINEQSTFQFCAIPQVM 301
Query: 293 AIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
AI TLAL +NN +V VK+R+G T ++I +++ + F + +K ++ DPN
Sbjct: 302 AIATLALVFNNEKVLTDRVKIRKGTTCELILKSHTLHGCLSIFRHYVRDIKSRVPVQDPN 361
Query: 353 ATKTLSRVEAIQK 365
K +V I++
Sbjct: 362 YLKVNIQVARIEQ 374
>gi|19112155|ref|NP_595363.1| squalene synthase Erg9 (predicted) [Schizosaccharomyces pombe
972h-]
gi|544251|sp|P36596.1|FDFT_SCHPO RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|295669|gb|AAA35343.1| squalene synthetase [Schizosaccharomyces pombe]
gi|4160341|emb|CAA22809.1| squalene synthase Erg9 (predicted) [Schizosaccharomyces pombe]
Length = 460
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 222/356 (62%), Gaps = 21/356 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY +L SRSFA+VI++L +R AV IFYLVLR LDTVEDD ++P D K+PIL F++
Sbjct: 38 CYQLLDMTSRSFAVVIKELPNGIREAVMIFYLVLRGLDTVEDDMTLPLDKKLPILRDFYK 97
Query: 100 HVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W F S ++ + L+ +F V +L L +GY++ I +ITK MG GMA +
Sbjct: 98 TIEVEGWTFNESGPNEKDRQLLVEFDVVIKEYLNLSEGYRNVISNITKEMGDGMAYYASL 157
Query: 158 -------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFL 205
VE+I+D+++YC+YVAGLVG+GLS+LF S ED PD ++SNS+GLFL
Sbjct: 158 AEKNDGFSVETIEDFNKYCHYVAGLVGIGLSRLFAQSKLED--PDLAHSQAISNSLGLFL 215
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALM 265
QK NIIRDY ED ++ R FWPREIWSKY + DL +NS+KA++CL+DM NAL
Sbjct: 216 QKVNIIRDYREDFDD---NRHFWPREIWSKYTSSFGDLCLPDNSEKALECLSDMTANALT 272
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H D L Y+S L+ IF FCAIPQ+MAI TLA + N +VF+ VK+R+G ++I +
Sbjct: 273 HATDALVYLSQLKTQEIFNFCAIPQVMAIATLAAVFRNPDVFQTNVKIRKGQAVQIILHS 332
Query: 326 NNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILH 381
N+ +V F ++ + K DPN K I++ + + +RF+ ++
Sbjct: 333 VNLKNVCDLFLRYTRDIHYKNTPKDPNFLKISIECGKIEQ--VSESLFPRRFREMY 386
>gi|395842325|ref|XP_003793968.1| PREDICTED: squalene synthase isoform 2 [Otolemur garnettii]
Length = 374
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 223/385 (57%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y LL+ ++ ++ K +P CY L++ SRSFA VI+ L +
Sbjct: 7 LGHPEEFYNLLRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y+ +W F +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYEPDWRF-MDSKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED L + + +NSMGLFLQKTNIIRDYLED E R FWP+E+W +YV
Sbjct: 142 RLFSASEFEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWGRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+GVVK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRAQNLPTCQLISRS---HYS 340
>gi|332244656|ref|XP_003271490.1| PREDICTED: squalene synthase isoform 2 [Nomascus leucogenys]
Length = 374
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 222/385 (57%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRF-MESKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 142 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFTKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRTQNLPNCQLISRS---HYS 340
>gi|311306886|gb|ADP89473.1| squalene synthase [Betula platyphylla]
Length = 148
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/148 (91%), Positives = 142/148 (95%)
Query: 75 ALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 134
ALDTVEDDTSIPTDVKVPIL AFHRH+YD EWHFSCGTKEYKVLMDQFHHVSTAFLEL K
Sbjct: 1 ALDTVEDDTSIPTDVKVPILKAFHRHIYDCEWHFSCGTKEYKVLMDQFHHVSTAFLELEK 60
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
YQ+AIE+ITKRMGAGMAKFICKEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASG+EDLA
Sbjct: 61 SYQEAIEEITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLAS 120
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIP 222
D LSNSMGLFLQKTNIIRDYLEDINEIP
Sbjct: 121 DHLSNSMGLFLQKTNIIRDYLEDINEIP 148
>gi|402877485|ref|XP_003902456.1| PREDICTED: squalene synthase isoform 2 [Papio anubis]
Length = 374
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 222/385 (57%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRF-MESKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED E R FWP+E+WS+YV
Sbjct: 142 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRTQNLPNCQLISRS---HYS 340
>gi|448101457|ref|XP_004199565.1| Piso0_002102 [Millerozyma farinosa CBS 7064]
gi|359380987|emb|CCE81446.1| Piso0_002102 [Millerozyma farinosa CBS 7064]
Length = 448
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 229/385 (59%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASR---QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L +L HP +L +L+ K + + + + E A+CY ML SRSFA VI++
Sbjct: 1 MGKLVQLLSHPSELRAVLQYKFFRKPVYENDAKYKSE-ELAYCYYMLGCTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEY 115
L +LR+ V IFYLVLRALDTVEDD ++ + KV +L FH + +EW F S ++
Sbjct: 60 LEPELRDVVMIFYLVLRALDTVEDDMTLQPNFKVSLLREFHHKLKLKEWSFDGSGPNEKD 119
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++++ F+ + + + L YQD I DIT++MG GMA ++ E V ++ DYD YC
Sbjct: 120 RIVLVHFNSILSIYHSLKPKYQDIIRDITEKMGNGMADYVLDEDFNMNGVATVKDYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GLSKL + D L D S SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLSKLMVEANFADISLTQDGFAKSESMGLFLQKTNIIRDYEEDLRD---GR 236
Query: 226 MFWPREIWSKYVNKLEDL---KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWP+E+WSKY + L K E+ K ++C+N++V NAL HV+DCL Y+S + D +
Sbjct: 237 SFWPKEVWSKYTDSLSSFREDKSPESEKKGLECINELVLNALHHVKDCLTYLSLVSDPSC 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MAI TLAL +NN +V R VK+R+G T +I ++ V F + +
Sbjct: 297 FNFCAIPQVMAIATLALVHNNPKVLRQNVKIRKGTTCNLILKSRTFPGVVQIFRSYVRDI 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
+ +DPN K I++ C
Sbjct: 357 HHNSSVSDPNYLKIGIICGEIEQFC 381
>gi|290998469|ref|XP_002681803.1| squalene synthase [Naegleria gruberi]
gi|284095428|gb|EFC49059.1| squalene synthase [Naegleria gruberi]
Length = 448
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 163/363 (44%), Positives = 223/363 (61%), Gaps = 30/363 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI---PTDVKVPILI 95
FCY L++VSRSFA+VIQ+L +L++ V IFYLVLR LDTVEDDT + K +L
Sbjct: 36 FCYDKLNQVSRSFAMVIQELPDELKHPVAIFYLVLRGLDTVEDDTEYLKENPEAKHELLR 95
Query: 96 AFHRHVYDREWHF-SCG-----TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
F++ + + +H +CG T Y LM F HV FL L + YQ IED+T +MG
Sbjct: 96 TFYQKIRNPNFHLENCGGSLNATAHYADLMLHFDHVCKIFLSLDQKYQAVIEDVTMKMGC 155
Query: 150 GMAKFI-CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASG--------------TEDLAP 194
GM ++ V+++ DYDEYC+YVAGLVG+GLS +F A G +ED
Sbjct: 156 GMVDYLGMTGVDTVKDYDEYCHYVAGLVGIGLSDMFTAFGEDKQALFKVGLSGSSEDPLK 215
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAV 253
SLSN MGLFLQK NIIRDY EDI E R F+P + ++ + ++ DLK +N +A+
Sbjct: 216 KSLSNLMGLFLQKVNIIRDYAEDIEE---GRTFYPSSAFQQFGLTQVTDLKDPKNLPQAL 272
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKM 313
+ LN +VT+AL H DCL+YMS+++D +F FCAIPQ+MAI TL YNN VF VK+
Sbjct: 273 KTLNYLVTDALSHAPDCLEYMSSIKDPKVFSFCAIPQVMAIATLVEIYNNPNVFVKNVKI 332
Query: 314 RRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN--DPNATKTLSRVEAIQKACMDSG 371
R+GLTA++ T + DV F F+ L+ K+ KN DP+A +T ++ IQK +
Sbjct: 333 RKGLTARIFMETKTLGDVQKWFSKFAADLRVKLEKNLDDPSAQQTKQALDNIQKKAGEKT 392
Query: 372 VLN 374
+ N
Sbjct: 393 MKN 395
>gi|149239989|ref|XP_001525870.1| squalene synthetase [Lodderomyces elongisporus NRRL YB-4239]
gi|146449993|gb|EDK44249.1| squalene synthetase [Lodderomyces elongisporus NRRL YB-4239]
Length = 449
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 227/383 (59%), Gaps = 19/383 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKL---KMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG + +L HP +L +K + + + CY +LH SRSFA VI++
Sbjct: 1 MGKVVQLLTHPTELLAAIKFFGFRQSLHSSTSSQANSDELKRCYELLHLTSRSFAAVIEE 60
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEY 115
L +LR+A+ IFYLVLRALDTVEDD +I + K+P+L F + + W F S ++
Sbjct: 61 LHPELRDAIMIFYLVLRALDTVEDDMTIDPETKIPLLRHFDEKLDTKNWTFNGSGPNEKD 120
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+ ++ +F + + EL YQ+ I+DIT +MG GMA +I E V S++DYD YC
Sbjct: 121 RAVLVEFDVILKIYHELKPQYQEIIKDITYKMGNGMADYILDENFNLNGVGSVEDYDLYC 180
Query: 170 YYVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+KL + D LA D SNSMGLFLQKTNIIRDY ED+ + R
Sbjct: 181 HYVAGLVGEGLTKLMVLAKFSDKSLAEDKFVKSNSMGLFLQKTNIIRDYHEDLQD---GR 237
Query: 226 MFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
FWP++IWSKY + L K + +K + C+N++V NAL HV+ L+++S ++D + F
Sbjct: 238 SFWPKDIWSKYTDSLPSFHKDASHEEKGLACINELVLNALGHVKHVLEFLSLVKDPSTFS 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MAI TLA YNN +V GVVK+R+G T K+I + V F + ++
Sbjct: 298 FCAIPQVMAIATLAEVYNNPKVLHGVVKIRKGTTCKLILESRTFPGVVRIFRKYIQVINH 357
Query: 345 KINKNDPNATKTLSRVEAIQKAC 367
K + DPN K + I++ C
Sbjct: 358 KSSVRDPNYLKIGIKCGEIEQFC 380
>gi|426358845|ref|XP_004046701.1| PREDICTED: squalene synthase isoform 2 [Gorilla gorilla gorilla]
Length = 374
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 221/385 (57%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRF-MESKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 142 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFAKPENIDLAVQCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRTQNLPNCQLISRS---HYS 340
>gi|238883734|gb|EEQ47372.1| squalene synthetase [Candida albicans WO-1]
Length = 448
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 228/385 (59%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA---EKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG +L HP +L +++L RQ K+ + CY +L+ SRSFA VI++
Sbjct: 1 MGKFLQLLSHPTELKAVIQL-FGFRQPLHPGKRDVNDEELVRCYELLNLTSRSFAAVIEE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LR+AV IFYLVLRALDT+EDD +I + +K+P+L F + + W F K
Sbjct: 60 LHPELRDAVMIFYLVLRALDTIEDDMTIKSSIKIPLLREFDTKLNTKNWTFDGNGPNEKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ +F + + L YQD I+ IT +MG GMA +I E V +++DY+ YC
Sbjct: 120 RTVLVEFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILDEEFNVNGVATVEDYNLYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+ LF + G + L ++ + +SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQKTNIIRDYHEDLQD---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDK---AVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWPREIWSKY L+D + K V C+N++V NAL HV DCL Y+S ++D +
Sbjct: 237 SFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHVTDCLDYLSLVKDPSS 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MA+ TLA YNN +V GVVK+R+G T ++I + + V F ++ ++
Sbjct: 297 FSFCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCRLILESRTLPGVVKIFKEYIQVI 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K + DPN K + I++ C
Sbjct: 357 NHKSSVRDPNYLKIGIKCGEIEQYC 381
>gi|358057005|dbj|GAA96912.1| hypothetical protein E5Q_03586 [Mixia osmundae IAM 14324]
Length = 502
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 208/331 (62%), Gaps = 20/331 (6%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L + A+CIFYLVLR LDTVEDD +IP K P+L++FH
Sbjct: 59 CWFFLDMTSRSFAAVIKELEPPVARAICIFYLVLRGLDTVEDDMTIPLATKEPVLVSFHE 118
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
+ ++ W F+ + K L+ +F +V L +GY+ I DI + MGAGMAK+
Sbjct: 119 RLSEKGWTFTGNGPDEKDRQLLVEFDNVIQEMALLDEGYRTVITDIAREMGAGMAKYARM 178
Query: 156 ------CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLF 204
V+++ +D YC+YVAGLVG GLS++F ASG ED P +LSNSMGL
Sbjct: 179 ADENAGVFSVDTLASFDLYCHYVAGLVGEGLSRIFAASGRED--PQLGKQLTLSNSMGLM 236
Query: 205 LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNAL 264
LQKTNI+RD+ EDI++ R+FWP+EIW KY + DL +ENS+ A L++M +AL
Sbjct: 237 LQKTNILRDFREDIDD---GRLFWPKEIWGKYAKEPRDLTLKENSEAARWALSEMTVDAL 293
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
H D L Y++ L+D AIF FCA+PQ+MAI TL C++N++V++ VK+RR LTA +I +
Sbjct: 294 THAVDALNYLTLLKDQAIFCFCAVPQVMAIATLEECFDNLDVYQKNVKIRRTLTASLIYK 353
Query: 325 TNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
T N DV F F + + + DP+ K
Sbjct: 354 TANPRDVAYFFRHFVGKINQRKSPADPSYIK 384
>gi|2499979|sp|P78589.1|FDFT_CANAL RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|1711286|dbj|BAA13995.1| squalene synthase [Candida albicans]
Length = 448
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 230/385 (59%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA---EKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG +L HP +L +++L RQ K+ + CY +L+ SRSFA VI++
Sbjct: 1 MGKFLQLLSHPTELKAVIQL-FGFRQPLHPGKRDVNDKELGRCYELLNLTSRSFAAVIEE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY- 115
L +LR+AV IFYLVLRALDT+EDD +I + +K+P+L F + + W F G E
Sbjct: 60 LHPELRDAVMIFYLVLRALDTIEDDMTIKSSIKIPLLREFDTKLNTKNWTFDGYGPNEKD 119
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+ ++ +F + + L YQD I+ IT +MG GMA +I E V +++DY+ YC
Sbjct: 120 RTVLVEFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILDEEFNVYGVATVEDYNLYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+ LF + G + L ++ + +SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQKTNIIRDYHEDLQD---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDK---AVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWPREIWSKY L+D + K V C+N++V NAL HV DCL Y+S ++D +
Sbjct: 237 SFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHVTDCLDYLSLVKDPSS 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MA+ TLA YNN +V GVVK+R+G T ++I + + V F ++ ++
Sbjct: 297 FSFCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCRLILESRTLPGVVKIFKEYIQVI 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K + DPN K + I++ C
Sbjct: 357 NHKSSVRDPNYLKIGIKCGEIEQYC 381
>gi|68483149|ref|XP_714509.1| hypothetical protein CaO19.11099 [Candida albicans SC5314]
gi|68483250|ref|XP_714460.1| hypothetical protein CaO19.3616 [Candida albicans SC5314]
gi|46436026|gb|EAK95396.1| hypothetical protein CaO19.3616 [Candida albicans SC5314]
gi|46436082|gb|EAK95451.1| hypothetical protein CaO19.11099 [Candida albicans SC5314]
Length = 448
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 228/385 (59%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA---EKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG +L HP +L +++L RQ K+ + CY +L+ SRSFA VI++
Sbjct: 1 MGKFLQLLSHPTELKAVIQL-FGFRQPLHPGKRDVNDKELVRCYELLNLTSRSFAAVIEE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LR+AV IFYLVLRALDT+EDD +I + +K+P+L F + + W F K
Sbjct: 60 LHPELRDAVMIFYLVLRALDTIEDDMTIKSSIKIPLLREFDTKLNTKNWTFDGNGPNEKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ +F + + L YQD I+ IT +MG GMA +I E V +++DY+ YC
Sbjct: 120 RTVLVEFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILDEEFNVNGVATVEDYNLYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDLAPDSLS--NSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+ LF + G + L ++ + +SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQKTNIIRDYHEDLQD---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDK---AVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWPREIWSKY L+D + K V C+N++V NAL HV DCL Y+S ++D +
Sbjct: 237 SFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHVTDCLDYLSLVKDPSS 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MA+ TLA YNN +V GVVK+R+G T ++I + + V F ++ ++
Sbjct: 297 FSFCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCRLILESRTLPGVVKIFKEYIQVI 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K + DPN K + I++ C
Sbjct: 357 NHKSSVRDPNYLKIGIKCGEIEQYC 381
>gi|332862705|ref|XP_003317962.1| PREDICTED: squalene synthase [Pan troglodytes]
gi|397467304|ref|XP_003805364.1| PREDICTED: squalene synthase isoform 2 [Pan paniscus]
gi|194382104|dbj|BAG58807.1| unnamed protein product [Homo sapiens]
Length = 374
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 221/385 (57%), Gaps = 60/385 (15%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP------EPHWAFCYSMLHKVSRSFALVIQQLGTD 61
L HP++ Y L++ ++ ++ K +P CY L++ SRSFA VIQ L +
Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE 64
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F +KE
Sbjct: 65 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRF-MESKE------- 116
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
K+ + ++D+ YC+YVAGLVG+GLS
Sbjct: 117 -----------------------------------KDRQVLEDFPTYCHYVAGLVGIGLS 141
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV
Sbjct: 142 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVK 198
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA
Sbjct: 199 KLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLA 258
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLS 358
CYNN +VF+G VK+R+G ++ NM V Y + + +I +DP+++KT
Sbjct: 259 ACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ 318
Query: 359 RVEAIQKACMDSGVLNKRFKILHYS 383
+ I+ + + L R HYS
Sbjct: 319 IISTIRTQNLPNCQLISRS---HYS 340
>gi|363748438|ref|XP_003644437.1| hypothetical protein Ecym_1390 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888069|gb|AET37620.1| hypothetical protein Ecym_1390 [Eremothecium cymbalariae
DBVPG#7215]
Length = 445
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 227/365 (62%), Gaps = 20/365 (5%)
Query: 7 VLRHPDDLYPLLKLKMASR---QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
+ HP +L +LKLK + K P CY +L SRSF+ VI +L +LR
Sbjct: 6 LFEHPLELKAVLKLKYLREPLFRTAKDTSETPELKRCYELLEGTSRSFSAVIMELHPELR 65
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK---VLMD 120
N+V +FYL+LRALDTVEDD +I +KVP+L F + + EW+F+ +++ K VL+
Sbjct: 66 NSVMLFYLILRALDTVEDDMTINPKIKVPLLRNFWKKLELTEWNFTGNSEQEKDRPVLL- 124
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 174
+F ++ + +L YQ I+DIT +MG GMA ++ E +E++ DYD YC+YVAG
Sbjct: 125 EFTNILKEYHKLKPDYQLVIKDITNKMGNGMADYVLDEQFNLNGLETVADYDLYCHYVAG 184
Query: 175 LVGLGLSKLFYAS--GTEDL--APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
LVG GL++L + G+ DL +SL SMGLFLQKTNIIRDY ED+++ R FWPR
Sbjct: 185 LVGDGLTRLIVLANFGSHDLYDESESLFESMGLFLQKTNIIRDYAEDLDD---GRSFWPR 241
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
EIWS+YV++L DL E D+ V C+N +V NAL HV+D L Y+S++ + + F+FCAIPQ
Sbjct: 242 EIWSQYVDELADLAKPEYLDEGVYCINHLVLNALSHVQDVLTYLSSIHEQSSFQFCAIPQ 301
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
+MAI TLAL + N +V + +K+R+G T +I ++ F + ++ +I +D
Sbjct: 302 VMAIATLALVFGNKKVLQTNIKIRKGTTCYLILKSRTFRGCVEIFEYYLRDIRKRITVDD 361
Query: 351 PNATK 355
PN K
Sbjct: 362 PNYLK 366
>gi|313509742|gb|ADR66119.1| squalene synthase, partial [Galinsoga parviflora]
Length = 156
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 144/156 (92%)
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+ I+DIT RMGAGMAKFI KEVE+IDDYDEYC+YVAGLVGLGLSKLF+ASGTE L P
Sbjct: 1 GYQEIIKDITMRMGAGMAKFIRKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEMLFP 60
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
DS+SNSMG+FLQK NII+DYLEDINEIP RMFWPREIWSKYVNKLEDLKYEENS+KA+Q
Sbjct: 61 DSMSNSMGIFLQKINIIQDYLEDINEIPNSRMFWPREIWSKYVNKLEDLKYEENSEKAIQ 120
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
CLNDMVTNAL+H+EDCLKYMS LRD IF FCAIPQ
Sbjct: 121 CLNDMVTNALIHIEDCLKYMSDLRDPTIFWFCAIPQ 156
>gi|302125044|gb|ADK93978.1| squalene synthase [Naegleria gruberi]
Length = 446
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 161/363 (44%), Positives = 222/363 (61%), Gaps = 30/363 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI---PTDVKVPILI 95
FCY L++VSRSFA+VIQ+L +L++ + IFYLVLR LDTVEDD + K +L
Sbjct: 36 FCYDKLNQVSRSFAMVIQELPEELKHPIAIFYLVLRGLDTVEDDIEYLKENPEAKHELLR 95
Query: 96 AFHRHVYDREWHF-SCG-----TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
F++ + D +H +CG T Y LM F HV FL L + YQ IED+T +MG
Sbjct: 96 TFYQKIRDPNFHLENCGGSLQATAHYADLMLHFDHVCKIFLRLDQKYQAVIEDVTMKMGC 155
Query: 150 GMAKFI-CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASG--------------TEDLAP 194
GM ++ V+++ DYDEYC+YVAGLVG+GLS +F A G +E+
Sbjct: 156 GMVDYLGMTGVDTVKDYDEYCHYVAGLVGIGLSDMFSAFGENREDLFKAGLSGSSEEPTK 215
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAV 253
SLSN MGLFLQK NIIRDY EDI E R F+P + ++ + ++ DLK +N +A+
Sbjct: 216 KSLSNLMGLFLQKVNIIRDYAEDIEE---GRTFYPSSAFQQFGLTQVTDLKDPKNLPQAL 272
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKM 313
+ LN +VT+AL H DCL+YMS ++D +F FCAIPQ+MAI TL YNN VF VK+
Sbjct: 273 KTLNYLVTDALSHAPDCLEYMSNIKDPKVFSFCAIPQVMAIATLVEIYNNPNVFVKNVKI 332
Query: 314 RRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN--DPNATKTLSRVEAIQKACMDSG 371
R+GLTA++ T ++ DV F F+ L+ K+ KN DP+A +T ++ IQK +
Sbjct: 333 RKGLTARIFMETKSLGDVQKWFSKFAADLRVKLEKNLEDPSAQQTKQALDNIQKKAGEKT 392
Query: 372 VLN 374
+ N
Sbjct: 393 MKN 395
>gi|126135220|ref|XP_001384134.1| farnesyl-diphosphate farnesyltransferase [Scheffersomyces stipitis
CBS 6054]
gi|126091332|gb|ABN66105.1| farnesyl-diphosphate farnesyltransferase [Scheffersomyces stipitis
CBS 6054]
Length = 448
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 235/385 (61%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPH---WAFCYSMLHKVSRSFALVIQQ 57
MG + +L HP++L +++L + RQ + P+ CY +L++ SRSFA VI++
Sbjct: 1 MGKIVQLLTHPNELKAVVQL-LYFRQPLHPVDPKKQGDTLKRCYYLLNQTSRSFAAVIKE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEY 115
L ++R+A+ +FYLVLRALDT+EDD ++ KVP+L +F + + +W F S ++
Sbjct: 60 LHPEIRDAIMLFYLVLRALDTIEDDMTLDPGFKVPLLRSFDDKLNEIDWTFNGSGPDEQD 119
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++++ +F V T + +L YQD I+DITK+MG GMA +I + VE++ DYD YC
Sbjct: 120 RIVLVEFDQVLTEYHKLKPEYQDIIKDITKKMGNGMADYILDDNFNLNGVETVADYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+K + D L D SNSMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTKFMVLAKFSDDSLVADGFVKSNSMGLFLQKTNIIRDYHEDLED---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDKAVQ---CLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWP+E+WSKY + L + +S+ Q C++++V N+L HV+ L+++S ++D +
Sbjct: 237 SFWPKEVWSKYTDALPSFHKDTSSESEAQGLSCISELVLNSLGHVKHVLEFLSLVKDPSS 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MAI TLA YNN +V VK+R+G T ++I ++ V F + I+
Sbjct: 297 FNFCAIPQVMAIATLATVYNNPKVLHSNVKIRKGTTCELILQSRTFPGVVKIFRKYVQII 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K N DPN K + I++ C
Sbjct: 357 NHKSNVKDPNYLKIGIKCGEIEQYC 381
>gi|321254438|ref|XP_003193072.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus gattii
WM276]
gi|317459541|gb|ADV21285.1| farnesyl-diphosphate farnesyltransferase, putative [Cryptococcus
gattii WM276]
Length = 509
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 204/328 (62%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L +L VC+FYLVLRALDTVEDD +IP DVK+P+L A H
Sbjct: 51 CWDFLDLTSRSFARVIRELEGELARIVCLFYLVLRALDTVEDDMTIPNDVKLPLLRALHT 110
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC--- 156
+Y+ W F ++ K+++++F + T F L YQ I DI K+MGAGMA F
Sbjct: 111 KLYEPGWTFKGSKEKDKIVLEEFDAIQTEFSLLDPKYQSVIADICKKMGAGMADFAALAT 170
Query: 157 -----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPD--SLSNSMGLFLQKT 208
E+ SI DYD YC+YVAGLVG GLS LF ASG E D +LSNSMGL LQKT
Sbjct: 171 PEQPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKERSFIADQLTLSNSMGLLLQKT 230
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI RD ED+ + R FWPR IWSKY N +++L E +A+ ++MV +AL H
Sbjct: 231 NIYRDLHEDVID---GRGFWPRAIWSKYGFNSMKELIDPERETEAMWAASEMVLDALRHA 287
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
D L YM+ L+ ++F F AIP +MAI TL + N ++F+ VK+R+G T ++I R N
Sbjct: 288 TDALDYMTLLKCQSVFNFVAIPAVMAIATLERTFMNKKIFKENVKIRKGETLRLIMRATN 347
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
DV F +++ + K++K+DPN K
Sbjct: 348 PRDVSYIFREYARKIHAKVHKDDPNLLK 375
>gi|255725244|ref|XP_002547551.1| squalene synthetase [Candida tropicalis MYA-3404]
gi|240135442|gb|EER34996.1| squalene synthetase [Candida tropicalis MYA-3404]
Length = 446
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 225/383 (58%), Gaps = 20/383 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA---EKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L +L HP + +K+ + RQ +K P + CY +L SRSFA VI++
Sbjct: 1 MGKLFQLLAHPTEFVAAVKI-LGFRQTLHPQKIDPNDTDLIRCYELLKLTSRSFAAVIKE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L DLR+A+ IFYLVLRALDT+EDD SI VKVP+L +F + +W F K
Sbjct: 60 LHPDLRDAIMIFYLVLRALDTIEDDMSIKPAVKVPLLRSFDDKLDTEDWTFDGNGPNEKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ +F + + YQ I+DITK+MG GMA +I E V ++ DYD YC
Sbjct: 120 RAVLVEFDKILRVYHRFKPEYQAIIKDITKKMGNGMADYILDENFNVNGVVTVKDYDLYC 179
Query: 170 YYVAGLVGLGLSK--LFYASGTEDLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL++ + G + L+ ++ + SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTEFLVLVKFGDQSLSANNFEKAESMGLFLQKTNIIRDYHEDLED---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSD-KAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
FWP+EIW KY +KL + + V C+N++V NAL HV DCL+Y+S ++D + F
Sbjct: 237 SFWPKEIWGKYTDKLPAFHNDPAKEFDGVSCINELVLNALNHVTDCLEYLSLVKDPSSFS 296
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MA+ TLA YNN +V GVVK+R+G T K+I ++ V F + ++
Sbjct: 297 FCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGTTCKLILQSRTFPGVVEIFKHYIQVINH 356
Query: 345 KINKNDPNATKTLSRVEAIQKAC 367
K + DPN K + I++ C
Sbjct: 357 KSHPRDPNYLKIGIKCGQIEQCC 379
>gi|261330809|emb|CBH13794.1| farnesyltransferase, putative [Trypanosoma brucei gambiense DAL972]
Length = 456
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 235/427 (55%), Gaps = 67/427 (15%)
Query: 13 DLYPLLKLKMASRQAEKQIPPEPH-WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYL 71
+LY +++++ R+ ++ + FCY +L VSRSFALVI QL LR+AVC+FYL
Sbjct: 6 ELYAMIRVRWQMRRMAGELQADDEDLRFCYDVLRDVSRSFALVIMQLKAALRDAVCVFYL 65
Query: 72 VLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAFL 130
VLRALDTVEDD +P + K+ L FH ++D W G + L+ +F HVS AF
Sbjct: 66 VLRALDTVEDDMQLPLEFKLRELPLFHTRLHDHTWRLDGVGEGRERELLQKFPHVSAAFS 125
Query: 131 ELGKGYQDAIEDITKRMGAGMAKFI-----CKE-------------------VESIDDYD 166
L +Q IEDI +RM GM F+ CK VE+ +D+D
Sbjct: 126 RLDPSFQSVIEDICRRMADGMCDFLQRTDTCKANNKEISEDNCHDGKSEKSAVETREDFD 185
Query: 167 EYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPK 223
YC+YVAGLVGLGL++LF SG E A + + +N MGL LQKTNIIRD+ EDI E P
Sbjct: 186 LYCHYVAGLVGLGLTQLFVRSGLEKAALEENMTRANHMGLLLQKTNIIRDFYEDICESPP 245
Query: 224 CRMFWPREIWSKYVNKL-------------------EDLKYEENS-----DKAVQCLNDM 259
R+FWPREIW +Y + L E KY + KAV CLN M
Sbjct: 246 -RVFWPREIWGQYTDDLHAFKGITRPTNGSNDTACGEGRKYSDEEKEIIKSKAVDCLNAM 304
Query: 260 VTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTA 319
V +AL+H+ ++Y++ LRD +F FCAIPQ+MA+ TLAL ++N +VF VK+ RG T
Sbjct: 305 VADALVHLPPVIEYLAELRDPTVFAFCAIPQVMAVATLALVFDNPDVFHSRVKLTRGATC 364
Query: 320 KVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKA------CMDSGVL 373
K+I +N T++ A +++ K NA ++ EA+ ++ MD VL
Sbjct: 365 KII---HNATELSAAL----KLVRTYAQKLLSNAHAGVASHEAVAQSLQVAIKTMDEQVL 417
Query: 374 NKRFKIL 380
K++
Sbjct: 418 RHNTKLV 424
>gi|401625352|gb|EJS43363.1| erg9p [Saccharomyces arboricola H-6]
Length = 444
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 226/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP +L LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLASHPIELKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN + +FYL+LRALDTVEDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCITLFYLILRALDTVEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + + +L YQD I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEYHKLNPEYQDVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L A + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIIIAKFANESLYANEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+YV +L+D EN + C+N +V NAL HV D L Y++++ + + F+FC
Sbjct: 237 FWPKEIWSQYVPQLKDFMKPENEQLGLDCINHLVLNALGHVIDVLTYLASVHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 297 AIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 IVQDPNFLKLNIQISKIEQ 375
>gi|344234909|gb|EGV66777.1| squalene synthetase [Candida tenuis ATCC 10573]
gi|344234910|gb|EGV66778.1| hypothetical protein CANTEDRAFT_112210 [Candida tenuis ATCC 10573]
Length = 448
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 230/384 (59%), Gaps = 20/384 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG L +L HPD+L ++L + + CY +L+ SRSF VI++L
Sbjct: 1 MGKLTELLLHPDELKAAIQLSKYRKPLFPRNLLKESASTKRCYELLYITSRSFKAVIEEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY-K 116
T+L++ V +FYL+LRALDTVEDD ++ +KVP L +F + +E+ F KE +
Sbjct: 61 HTELKDVVMVFYLLLRALDTVEDDMTLDPKIKVPWLKSFTDLLKLKEYSFDKVNEKEVDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
V + +F + T F +L YQD I DI KRMG GMAK+I E V +++DYD YCY
Sbjct: 121 VTLLEFTEILTEFHKLKPAYQDIITDICKRMGDGMAKYILDEQFNVSGVATLEDYDLYCY 180
Query: 171 YVAGLVGLGLSKLFYAS--GTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRM 226
YVAG+VG GL+KLF + G E L+ ++ S SMGLFLQKTNI RD+ ED+++ R
Sbjct: 181 YVAGIVGEGLTKLFVEAQFGDEVLSENNYSKAISMGLFLQKTNITRDFREDLDD---GRS 237
Query: 227 FWPREIWSKYVNKLEDLKYEENSD---KAVQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283
FWP+E+WSKY ++L D ++ + K VQC+N++V NAL HVED L Y+S ++D + F
Sbjct: 238 FWPKEVWSKYTDRLPDFTRTDSPEYQKKGVQCINELVLNALGHVEDVLVYLSHVKDPSSF 297
Query: 284 RFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILK 343
FCAIPQ+MA+ TL L YNN V VK+RRG T K+I + V F + +
Sbjct: 298 NFCAIPQVMAVATLELVYNNPNVLYENVKIRRGTTCKLILNSRTYPGVVNIFRHYLRKIH 357
Query: 344 PKINKNDPNATKTLSRVEAIQKAC 367
+ N DP+ + ++ +++ C
Sbjct: 358 HRSNVEDPHYFEIGLKIGKLEQIC 381
>gi|385305665|gb|EIF49623.1| squalene synthetase [Dekkera bruxellensis AWRI1499]
Length = 448
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 213/357 (59%), Gaps = 15/357 (4%)
Query: 7 VLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
+L HPD+ ++LK +QA+ P C ML SRSFA VI +L +LR +
Sbjct: 9 LLEHPDEFKAAVQLKFFRKQADVH-PSSDSEKECLKMLKITSRSFAAVIMELDAELRKPI 67
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHH 124
IFYLVLRALDT+EDD ++P VK+P L +FH ++ +W F+ + + + + +F
Sbjct: 68 MIFYLVLRALDTIEDDMTVPNAVKLPTLESFHNNLKKTKWTFNGTDPKERDSITLTRFDK 127
Query: 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGL 178
+ + EL YQD I+D T +MGAGMAK+ E V ++ DYD YC+YVAGLVG
Sbjct: 128 ILDVYHELKPEYQDIIKDTTAKMGAGMAKYARDEDFKLNGVRTVKDYDLYCHYVAGLVGE 187
Query: 179 GLSKLFYAS--GTEDLAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
GL+KL A+ G+ L +LS SMGLFLQKTNIIRDY ED+++ R FWP+E+W K
Sbjct: 188 GLTKLITAAKFGSPTLLDRMNLSESMGLFLQKTNIIRDYKEDLDD---GRTFWPKEVWGK 244
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
Y L D + E K V C++++V NAL +D L Y+S + DH+ F F AIPQ+MAI
Sbjct: 245 YAKNLSDFEKPEFIQKGVYCISELVLNALGEAKDSLTYLSLIYDHSTFNFTAIPQVMAIA 304
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
TLA + N V + VK+RRG TAK+I + + V F + I+ K DPN
Sbjct: 305 TLAEIFENPLVLKQNVKIRRGTTAKLILESRTYSGVLDIFSHYLRIIHHKCPVADPN 361
>gi|342183013|emb|CCC92493.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 452
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 209/358 (58%), Gaps = 49/358 (13%)
Query: 13 DLYPLLKLKMASR--QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFY 70
++Y +++++ R ++E + + FCY +L VSRSFALVI QL LR+AVC+FY
Sbjct: 7 EMYAMVRVRWQVRRLKSELRADDDDDLNFCYDILQDVSRSFALVIMQLRAGLRDAVCVFY 66
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAF 129
LVLRALDTVEDD +P DVK+ L FH ++D +W GT + L+ +F VS AF
Sbjct: 67 LVLRALDTVEDDMQVPLDVKLRELPLFHTRLWDPKWRLDGVGTGRERELLQEFPRVSAAF 126
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFI--------------------CKE-----VESIDD 164
L +QD I D+ +RM AGM F+ C E VES D
Sbjct: 127 KRLDSAFQDVIVDVCERMAAGMCDFLLRGSSSGGGSGNADVHGEIKCDERRDIAVESRKD 186
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEI 221
YD YC+YVAGLVG GL++LF SG E + + +N MGL LQKTNIIRD+ EDI E
Sbjct: 187 YDLYCHYVAGLVGHGLTRLFVRSGLEKAGLEDDMARANHMGLLLQKTNIIRDFYEDICEE 246
Query: 222 PKCRMFWPREIWSKYVNKLEDLK-----------------YEENSDKAVQCLNDMVTNAL 264
P R+FWPREIW ++ + L + K ++E KA+ CLN MV +AL
Sbjct: 247 PP-RVFWPREIWGRFTDDLHNFKGLPRLVNKPNGSNDAGDHDEVKQKALDCLNTMVADAL 305
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI 322
H+ ++Y+S LRD IF FCAIPQ+MAI TL+L ++N +VF VK+ RG T +I
Sbjct: 306 EHLPHVIEYLSNLRDSTIFAFCAIPQVMAIATLSLVFDNGDVFHTKVKLTRGATCAII 363
>gi|255716446|ref|XP_002554504.1| KLTH0F06886p [Lachancea thermotolerans]
gi|238935887|emb|CAR24067.1| KLTH0F06886p [Lachancea thermotolerans CBS 6340]
Length = 441
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 226/379 (59%), Gaps = 17/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG L ++ HP +L LKLK + + P CY +L K SRSFA VI +L
Sbjct: 1 MGKLGDLISHPLELKAALKLKYIRKPLFSLNDTKETPELRRCYQLLTKTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS--CGTKEYK 116
+LRNA+ +FYLVLRALDT+EDD +I VKVP+L F + +W F+ T++ +
Sbjct: 61 HPELRNAIMLFYLVLRALDTIEDDMTIDPKVKVPLLRDFDSKLDLEDWSFNGNAPTEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
++ +F + +L YQ I++IT +MG GMA +I E V +I DYD YC+
Sbjct: 121 CVLVEFPCILKELHKLKPEYQRVIKEITNKMGNGMASYILDENFNLNGVSTIKDYDLYCH 180
Query: 171 YVAGLVGLGLSKLFYAS--GTEDLAPDS--LSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YVAGLVG GL++L + GT DL +S L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 181 YVAGLVGDGLTQLIVLANFGTPDLYNESAYLFESMGLFLQKTNIIRDYAEDLED---GRS 237
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWPREIWS Y +KL D E++ + C++ +V NAL HVED L ++S++ + + F+FC
Sbjct: 238 FWPREIWSLYADKLVDFSLPEHTQDGLHCISHLVLNALSHVEDVLTFLSSVHEQSSFQFC 297
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL + N EV VK+R+G T +I ++ + F + +K ++
Sbjct: 298 AIPQVMAIATLALVFGNPEVLHKNVKIRKGTTCFLILKSRTLRGCVEIFQYYLRDIKKRL 357
Query: 347 NKNDPNATKTLSRVEAIQK 365
+DPN K ++ I++
Sbjct: 358 AVDDPNYLKINIQIARIEQ 376
>gi|405118964|gb|AFR93737.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus neoformans
var. grubii H99]
Length = 494
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 203/328 (61%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L +L VC+FYLVLRALDTVEDD +IP DVK+P+L A H
Sbjct: 51 CWDFLDLTSRSFARVIRELEGELARTVCLFYLVLRALDTVEDDMTIPNDVKLPLLRAMHT 110
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC--- 156
+Y+ W F ++ K+++++F + T F L YQ I DI K+MGAGMA F
Sbjct: 111 KLYEPGWTFKGSKEKDKIVLEEFDAIQTEFSLLDPKYQTVIADICKKMGAGMADFAALAT 170
Query: 157 -----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPD--SLSNSMGLFLQKT 208
E+ SI DYD YC+YVAGLVG GLS LF ASG E D +LSNSMGL LQKT
Sbjct: 171 PEQPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKERSFIADQLTLSNSMGLLLQKT 230
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI RD ED+ + R FWPR IWSKY N +++L E +A+ ++MV +AL H
Sbjct: 231 NIYRDLHEDVID---GRGFWPRAIWSKYGFNSMKELIDPERETEAMWAASEMVLDALRHA 287
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
D L YM+ LR ++F F AIP +MAI TL + N ++ + VK+R+G T ++I R N
Sbjct: 288 TDALDYMTLLRCQSVFNFVAIPAVMAIATLERTFMNKKILKENVKIRKGETLRLIMRAMN 347
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
DV F +++ + K++K+DPN K
Sbjct: 348 PRDVSYIFREYARKIHAKVHKDDPNLLK 375
>gi|72393483|ref|XP_847542.1| farnesyltransferase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175100|gb|AAX69249.1| farnesyltransferase, putative [Trypanosoma brucei]
gi|70803572|gb|AAZ13476.1| farnesyltransferase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 456
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 211/370 (57%), Gaps = 54/370 (14%)
Query: 13 DLYPLLKLKMASRQAEKQIPPEPH-WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYL 71
+LY +++++ R+ ++ + FCY +L VSRSFALVI QL LR+AVC+FYL
Sbjct: 6 ELYAMIRVRWQMRRMAGELQADDEDLRFCYDVLRDVSRSFALVIMQLKAALRDAVCVFYL 65
Query: 72 VLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAFL 130
VLRALDTVEDD +P + K+ L FH ++D W G + L+ +F HVS AF
Sbjct: 66 VLRALDTVEDDMQLPLEFKLRELPLFHTRLHDHTWRLDGVGEGRERELLQKFPHVSAAFS 125
Query: 131 ELGKGYQDAIEDITKRMGAGMAKFI-----CKE-------------------VESIDDYD 166
L +Q IEDI +RM GM F+ CK VE+ +D+D
Sbjct: 126 RLDPSFQSVIEDICRRMADGMCDFLQRTDTCKANNKEISEDNCHDGKSEKSAVETREDFD 185
Query: 167 EYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPK 223
YC+YVAGLVGLGL++LF SG E A + + +N MGL LQKTNIIRD+ EDI E P
Sbjct: 186 LYCHYVAGLVGLGLTQLFVRSGLEKAALEENMTRANHMGLLLQKTNIIRDFYEDICESPP 245
Query: 224 CRMFWPREIWSKYVNKL-------------------EDLKYEENS-----DKAVQCLNDM 259
R+FWPREIW +Y + L E KY + KAV CLN M
Sbjct: 246 -RVFWPREIWGQYTDDLHAFKGITRPTNGSNDTACGEGRKYSDEEKEIIKSKAVDCLNAM 304
Query: 260 VTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTA 319
V +AL+H+ ++Y++ LRD +F FCAIPQ+MA+ TLAL ++N +VF VK+ RG T
Sbjct: 305 VADALVHLPPVIEYLAELRDPTVFAFCAIPQVMAVATLALVFDNPDVFHSRVKLTRGATC 364
Query: 320 KVIDRTNNMT 329
K+I ++
Sbjct: 365 KIIHNATELS 374
>gi|343475788|emb|CCD12912.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 452
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 208/358 (58%), Gaps = 49/358 (13%)
Query: 13 DLYPLLKLKMASR--QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFY 70
++Y +++++ R ++E + + FCY +L VSRSFALVI QL LR+AVC+FY
Sbjct: 7 EMYAMVRVRWQVRRLKSELRADDDDDLNFCYDILQDVSRSFALVIMQLRAGLRDAVCVFY 66
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAF 129
LVLRALDTVEDD +P DVK+ L FH + D +W GT + L+ +F VS AF
Sbjct: 67 LVLRALDTVEDDMKVPLDVKLRELPLFHTRLRDPKWRLDGVGTGRERELLQEFPRVSAAF 126
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFI--------------------CKE-----VESIDD 164
L +QD I D+ +RM AGM F+ C E VES D
Sbjct: 127 TRLDSAFQDVIVDVCERMAAGMCDFLLRGSSSGGGSGNADVHGEIKCDERGDIAVESRKD 186
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEI 221
YD YC+YVAGLVG GL++LF SG E + + +N MGL LQKTNIIRD+ EDI E
Sbjct: 187 YDLYCHYVAGLVGHGLTRLFVRSGLEKAGLEDDMARANHMGLLLQKTNIIRDFYEDICEE 246
Query: 222 PKCRMFWPREIWSKYVNKLEDLK-----------------YEENSDKAVQCLNDMVTNAL 264
P R+FWPREIW ++ + L + K ++E KA+ CLN MV +AL
Sbjct: 247 PP-RVFWPREIWGRFTDDLHNFKGLPRLVNKPNGSNDAGDHDEVKQKALDCLNTMVADAL 305
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI 322
H+ ++Y+S LRD IF FCAIPQ+MAI TL+L ++N +VF VK+ RG T +I
Sbjct: 306 EHLPHVIEYLSNLRDSTIFAFCAIPQVMAIATLSLVFDNGDVFHTKVKLTRGATCAII 363
>gi|365760253|gb|EHN01985.1| Erg9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 444
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 227/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP +L LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPIELKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWRFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQD I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFQKLKPEYQDVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIIIARFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+YV +L+D ++ + C+N +V NAL HV D L Y++++ + + F+FC
Sbjct: 237 FWPKEIWSQYVPQLKDFMKPQDEQLGLDCINHLVLNALGHVIDVLTYLASIHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ ++ F + +K K+
Sbjct: 297 AIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRSLRGCVEIFDYYLRDIKSKL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 AVQDPNFLKLNIQISKIEQ 375
>gi|58265254|ref|XP_569783.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109091|ref|XP_776661.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259341|gb|EAL22014.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226015|gb|AAW42476.1| farnesyl-diphosphate farnesyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 542
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 203/328 (61%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L +L VC+FYLVLRALDTVEDD +IP DVK+P+L A H
Sbjct: 84 CWDFLDLTSRSFARVIRELEGELARTVCLFYLVLRALDTVEDDMTIPNDVKIPLLRAMHT 143
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC--- 156
+Y+ W F ++ K+++++F + T F L YQ I DI K+MGAGMA F
Sbjct: 144 KLYEPGWTFKESKEKDKIVLEEFDAIQTEFSLLDHKYQTVIADICKKMGAGMADFAALAT 203
Query: 157 -----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPD--SLSNSMGLFLQKT 208
E+ SI DYD YC+YVAGLVG GLS LF ASG E D +LSNSMGL LQKT
Sbjct: 204 PGKPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKERSFIADQLTLSNSMGLLLQKT 263
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI RD ED+ + R FWPR IWSKY N +++L E +A+ ++MV +AL H
Sbjct: 264 NIYRDLHEDVID---GRGFWPRAIWSKYGFNSMKELIDPERETEAMWAASEMVLDALRHA 320
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
D L Y++ LR ++F F AIP +MAI TL + N ++ + VK+R+G T ++I R N
Sbjct: 321 TDALDYLTLLRCQSVFNFVAIPAVMAIATLERTFMNKKILKENVKIRKGETLRLIMRAMN 380
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
DV F +++ + K++K+DPN K
Sbjct: 381 PRDVSYIFREYARKIHAKVHKDDPNLLK 408
>gi|58265252|ref|XP_569782.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109093|ref|XP_776660.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259340|gb|EAL22013.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226014|gb|AAW42475.1| farnesyl-diphosphate farnesyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 523
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 203/328 (61%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L +L VC+FYLVLRALDTVEDD +IP DVK+P+L A H
Sbjct: 84 CWDFLDLTSRSFARVIRELEGELARTVCLFYLVLRALDTVEDDMTIPNDVKIPLLRAMHT 143
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC--- 156
+Y+ W F ++ K+++++F + T F L YQ I DI K+MGAGMA F
Sbjct: 144 KLYEPGWTFKESKEKDKIVLEEFDAIQTEFSLLDHKYQTVIADICKKMGAGMADFAALAT 203
Query: 157 -----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPD--SLSNSMGLFLQKT 208
E+ SI DYD YC+YVAGLVG GLS LF ASG E D +LSNSMGL LQKT
Sbjct: 204 PGKPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKERSFIADQLTLSNSMGLLLQKT 263
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI RD ED+ + R FWPR IWSKY N +++L E +A+ ++MV +AL H
Sbjct: 264 NIYRDLHEDVID---GRGFWPRAIWSKYGFNSMKELIDPERETEAMWAASEMVLDALRHA 320
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
D L Y++ LR ++F F AIP +MAI TL + N ++ + VK+R+G T ++I R N
Sbjct: 321 TDALDYLTLLRCQSVFNFVAIPAVMAIATLERTFMNKKILKENVKIRKGETLRLIMRAMN 380
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
DV F +++ + K++K+DPN K
Sbjct: 381 PRDVSYIFREYARKIHAKVHKDDPNLLK 408
>gi|401838093|gb|EJT41879.1| ERG9-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 466
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 227/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP +L LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 23 MGKLLQLALHPIELKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 81
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 82 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWRFDGNAPDVKD 141
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQD I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 142 RAVLTDFESILIEFHKLKPEYQDVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 201
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 202 HYVAGLVGDGLTRLIIIARFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 258
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+YV +L+D ++ + C+N +V NAL HV D L Y++++ + + F+FC
Sbjct: 259 FWPKEIWSQYVPQLKDFMKPQDEQLGLDCINHLVLNALGHVIDVLTYLASIHEQSTFQFC 318
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ ++ F + +K K+
Sbjct: 319 AIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRSLRGCVEIFDYYLRDIKSKL 378
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 379 AVQDPNFLKLNIQISKIEQ 397
>gi|327405195|ref|YP_004346033.1| farnesyl-diphosphate farnesyltransferase [Fluviicola taffensis DSM
16823]
gi|327320703|gb|AEA45195.1| farnesyl-diphosphate farnesyltransferase [Fluviicola taffensis DSM
16823]
Length = 368
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/315 (47%), Positives = 197/315 (62%), Gaps = 20/315 (6%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
++CY L KVSRSFA+VIQQL DL+N VC+FYL+LR LDT+EDD +I VK +L+ F
Sbjct: 46 SYCYEALKKVSRSFAVVIQQLPEDLKNPVCLFYLILRGLDTIEDDMNIDNTVKKDMLLTF 105
Query: 98 HRHVYDREWHFS--CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
+ E+ T++Y+ LM F V + +LG Y+ I +IT M GM K+
Sbjct: 106 ADRINKEEFTLENVGDTQDYQDLMLHFDKVIREYQKLGSEYKAVITEITNEMAIGMNKYA 165
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE---DLAPDSLSNSMGLFLQKTNIIR 212
K VES +D+++YCYYVAGLVG+GLSKLF AS E L+ SLSN MGLFLQKTNIIR
Sbjct: 166 HKTVESYEDWNDYCYYVAGLVGIGLSKLFLASKLETSVKLSDKSLSNEMGLFLQKTNIIR 225
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLK 272
D+ ED+ + R+FWP E W L +L+ +E S + LN++V NAL HV CL+
Sbjct: 226 DFAEDLEQ---GRIFWPEESWKNKARTLNELQADEKS--GLSALNEVVVNALGHVPACLE 280
Query: 273 YMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVY 332
++ L D +FRFCAIPQ+MAI TL YNN +V VK+R+G TAK +
Sbjct: 281 FLDCLDDQKVFRFCAIPQLMAIATLKELYNNPDVLHKNVKIRKGKTAK----------YF 330
Query: 333 LAFYDFSNILKPKIN 347
+A DF+N K I+
Sbjct: 331 IAIQDFNNTKKEFIS 345
>gi|171481|gb|AAA34597.1| squalene synthetase [Saccharomyces cerevisiae]
gi|151944134|gb|EDN62427.1| farnesyl-diphosphate farnesyl transferase [Saccharomyces cerevisiae
YJM789]
gi|207344492|gb|EDZ71616.1| YHR190Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271502|gb|EEU06550.1| Erg9p [Saccharomyces cerevisiae JAY291]
gi|259146949|emb|CAY80205.1| Erg9p [Saccharomyces cerevisiae EC1118]
gi|392299002|gb|EIW10097.1| Erg9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 444
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 225/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP ++ LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPVEMKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++++ + + F+FC
Sbjct: 237 FWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLASIHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 297 AIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 AVQDPNFLKLNIQISKIEQ 375
>gi|327288074|ref|XP_003228753.1| PREDICTED: squalene synthase-like, partial [Anolis carolinensis]
Length = 351
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 195/307 (63%), Gaps = 6/307 (1%)
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH 123
+ VCI YLVL ALD VEDD +I + K+PIL FH + +W F + K +++ F
Sbjct: 1 HVVCILYLVLLALDIVEDDMTISLETKIPILHNFHSFLNQPDWRFMGSNDKNKHVLEDFP 60
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
+S F L K YQD I D+ +++G GMA+F+ K+VES D+D+YC+Y +G +G+GLS+L
Sbjct: 61 TISLEFRNLAKVYQDVIADVCRKVGLGMAEFLEKKVESEKDWDKYCHYASGQLGIGLSQL 120
Query: 184 FYASGTEDLAPDS---LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
F S EDL L+N+MG+FL K +IIRDY ED+ R FWP+E+WSKY N +
Sbjct: 121 FSVSKLEDLTVGQDIELANTMGVFLHKIDIIRDYHEDL---LAGREFWPQEVWSKYANTM 177
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC 300
DL EN +KA+QCLN+++TNAL H+ D L Y+S L++ ++F FCAIPQ+ AI LA C
Sbjct: 178 SDLARPENVNKAIQCLNELITNALHHIPDVLTYLSRLKNQSVFNFCAIPQVRAIVILAAC 237
Query: 301 YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV 360
YNN +VF+G VK+R+G ++ N+ V Y + + KI DP++++T V
Sbjct: 238 YNNPQVFQGPVKIRKGQDVSLMMDATNLQAVKAIVYQYMEEIYRKIPSTDPSSSRTQQIV 297
Query: 361 EAIQKAC 367
++ C
Sbjct: 298 TSVCSLC 304
>gi|444319390|ref|XP_004180352.1| hypothetical protein TBLA_0D03330 [Tetrapisispora blattae CBS 6284]
gi|387513394|emb|CCH60833.1| hypothetical protein TBLA_0D03330 [Tetrapisispora blattae CBS 6284]
Length = 471
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 236/386 (61%), Gaps = 24/386 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEK--QIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
M + HP +L L LK + K + +P+ CY +L+ SRSFA VI +L
Sbjct: 1 MSKFLQLCTHPLELRAALVLKFIKKPLFKVSESSIDPNLKRCYELLNLTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK-- 116
+LR+A+ IFYL+LRALDT+EDD SI TD K+ +L F+ + +W + +K+ K
Sbjct: 61 NPELRSAIAIFYLILRALDTIEDDMSIDTDEKIKLLKDFYSKLDTSDWSYKGNSKDVKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
V++ +F + + L YQ+ I+DITK+MG GM+K+I E +E+I +YD YC+
Sbjct: 121 VVLVEFPVILKEYHNLKASYQNVIKDITKKMGFGMSKYIMDENFQKNGIETIKEYDLYCH 180
Query: 171 YVAGLVGLGLSKLFYAS--GTEDLAPDSLSN----SMGLFLQKTNIIRDYLEDINEIPKC 224
YVAGLVG GL++L + +EDL + N SMGLFLQKTNIIRDY ED+ +
Sbjct: 181 YVAGLVGDGLTRLIVLADFASEDLYLECEKNGWFESMGLFLQKTNIIRDYAEDLED---G 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSD-----KAVQCLNDMVTNALMHVEDCLKYMSALRD 279
R FWP+EIWS++ ++L + ++ D K ++C+ND+V NAL+H+ D L Y+S++ +
Sbjct: 238 RAFWPKEIWSRHTDQLSNFYNNKSRDPEVEKKGLECINDLVLNALVHIPDVLMYLSSVYE 297
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFS 339
+ F+FC+IPQ+MAI TLAL +NN +V VK+R+G T +I + ++++ F +
Sbjct: 298 QSTFQFCSIPQVMAIATLALVFNNKDVLYKNVKIRKGTTLYLIQNSRSLSECVDIFQYYL 357
Query: 340 NILKPKINKNDPNATKTLSRVEAIQK 365
++ K+ +DPN K +V I++
Sbjct: 358 RQIRKKLPVDDPNYLKINIQVAKIEQ 383
>gi|6321984|ref|NP_012060.1| bifunctional farnesyl-diphosphate farnesyltransferase/squalene
synthase [Saccharomyces cerevisiae S288c]
gi|729468|sp|P29704.2|FDFT_YEAST RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|458934|gb|AAB68360.1| Erg9p: Squalene synthetase [Saccharomyces cerevisiae]
gi|285810095|tpg|DAA06882.1| TPA: bifunctional farnesyl-diphosphate farnesyltransferase/squalene
synthase [Saccharomyces cerevisiae S288c]
Length = 444
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 224/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP ++ LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPVEMKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++ + + + F+FC
Sbjct: 237 FWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLAGIHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 297 AIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 AVQDPNFLKLNIQISKIEQ 375
>gi|343469557|emb|CCD17497.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 452
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 208/358 (58%), Gaps = 49/358 (13%)
Query: 13 DLYPLLKLKMASR--QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFY 70
++Y +++++ R ++E + + FCY +L VSRSFALVI QL LR+AVC+FY
Sbjct: 7 EMYAMVRVRWQVRRLKSELRADDDDDLNFCYDILQDVSRSFALVIMQLRAGLRDAVCVFY 66
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAF 129
LVLRALDTVEDD +P DVK+ L FH + D +W GT + L+ +F VS AF
Sbjct: 67 LVLRALDTVEDDMKVPLDVKLRELPLFHTRLQDPKWRLDGVGTGRERELLQEFPRVSAAF 126
Query: 130 LELGKGYQDAIEDITKRMGAGMAKFI--------------------CKE-----VESIDD 164
L +QD I D+ +RM AGM F+ C E VES D
Sbjct: 127 TRLDSAFQDVIVDVCERMAAGMCDFLLRGSSSGGGSGNADVHGEIKCDERGDIAVESRKD 186
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEI 221
YD YC+YVAGLVG GL++LF SG E + + ++ MGL LQKTNIIRD+ EDI E
Sbjct: 187 YDLYCHYVAGLVGHGLTRLFVRSGLEKAGLEDDMARADHMGLLLQKTNIIRDFYEDICEE 246
Query: 222 PKCRMFWPREIWSKYVNKLEDLK-----------------YEENSDKAVQCLNDMVTNAL 264
P R+FWPREIW ++ + L + K ++E KA+ CLN MV +AL
Sbjct: 247 PP-RVFWPREIWGRFTDDLHNFKGLPRLVNKPNGSNDAGDHDEVKQKALDCLNTMVADAL 305
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI 322
H+ ++Y+S LRD IF FCAIPQ+MAI TL+L ++N +VF VK+ RG T +I
Sbjct: 306 EHLPHVIEYLSNLRDPTIFAFCAIPQVMAIATLSLVFDNGDVFHTKVKLTRGATCAII 363
>gi|331212887|ref|XP_003307713.1| farnesyl-diphosphate farnesyltransferase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309298116|gb|EFP74707.1| farnesyl-diphosphate farnesyltransferase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 496
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 224/374 (59%), Gaps = 22/374 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE------PHWAFCYSMLHKVSRSFALV 54
+G + +RHP +L L+ K+ + PE P+ C+ L + SRSF+ V
Sbjct: 4 LGLIWLAIRHPQELKALVNYKLWYDPPNLEEHPEITRINEPNMKACWLFLDQTSRSFSAV 63
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCG-T 112
I++L +L VCIFYLVLR LDTVEDD SIP ++K +L +F++ + W+F C T
Sbjct: 64 IKELDGELSRVVCIFYLVLRGLDTVEDDMSIPIELKETLLKSFYQKLDQPGWNFDGCSPT 123
Query: 113 KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVE-----SID---D 164
++ + L+ +F V + F L Y+ + D+T RMG+GMA+F V+ SID
Sbjct: 124 EKDRNLLVEFDKVISEFQVLEPKYRTIVTDVTARMGSGMARFARTAVDGGGIFSIDTMAG 183
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEI 221
+D YC+YVAGLVG GLS+LF SG E+ LSNSMGL LQKTNI+RD+ ED++
Sbjct: 184 FDGYCHYVAGLVGEGLSRLFSESGKENEELGYQLRLSNSMGLLLQKTNILRDFREDVD-- 241
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA 281
RMFWP IW K+V++ L + +A L +M +AL H D L+YM+ L++ +
Sbjct: 242 -AGRMFWPEAIWRKFVDEPRLLTLPQFQKQARWALTEMTIDALSHAVDALEYMTLLKNQS 300
Query: 282 IFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNI 341
IF FCAIPQ+MAI TL LC+ N++VF+ VK+RR L A +I + N D+ F DF++
Sbjct: 301 IFNFCAIPQVMAIATLELCFENLDVFQKNVKIRRSLMALLISKAINPRDLSYIFVDFAHR 360
Query: 342 LKPKINKNDPNATK 355
+ + + +DPN K
Sbjct: 361 IHQRADPSDPNYLK 374
>gi|349578741|dbj|GAA23906.1| K7_Erg9p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 444
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 225/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP ++ LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPVEMKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++++ + + F+FC
Sbjct: 237 FWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLASIHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K ++
Sbjct: 297 AIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSEL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 AVQDPNFLKLNIQISKIEQ 375
>gi|3686|emb|CAA42583.1| farnesyl-diphosphate farnesyltransferase [Saccharomyces cerevisiae]
Length = 444
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 224/379 (59%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP ++ LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPVEMKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNFTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++ + + + F+FC
Sbjct: 237 FWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLAGIHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TLAL +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 297 AIPQVMAIATLALVFNNREVLHGDVKIRKGTTCCLILKSRTLRGCVEIFDYYLRDIKSKL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 AVQDPNFLKLNIQISKIEQ 375
>gi|366991243|ref|XP_003675387.1| hypothetical protein NCAS_0C00280 [Naumovozyma castellii CBS 4309]
gi|342301252|emb|CCC69018.1| hypothetical protein NCAS_0C00280 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/347 (43%), Positives = 217/347 (62%), Gaps = 28/347 (8%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY +L+ SRSFA VI++L +LR+ + IFYLVLRALDT+EDD ++ T +K+ +L F +
Sbjct: 42 CYELLNLTSRSFAAVIKELHPELRDVIMIFYLVLRALDTIEDDMTLDTKLKMNLLREFDQ 101
Query: 100 HVYDREWHFSCG---TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ +EW F K+ VL+D F+++ + L YQ I+++TK MG GMA +I
Sbjct: 102 KLDLQEWSFDGNGPDEKDRAVLVD-FNYILYEYHALKPEYQKVIKEVTKEMGNGMADYII 160
Query: 157 KE------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN----------- 199
E VE+I DYD+YC+YVAGLVG+GL++L +G AP SL
Sbjct: 161 DENFNLNGVETIKDYDKYCHYVAGLVGVGLTQLIVIAG---FAPKSLYEDEKDAELPLYE 217
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN-KLEDLKYEENSDKAVQCLND 258
SMGLFLQKTNIIRDY ED+++ R FWP+EIWSKY + KL + + + K V+C+ND
Sbjct: 218 SMGLFLQKTNIIRDYSEDLDD---GRSFWPKEIWSKYSSTKLSSFREPDQTQKGVECIND 274
Query: 259 MVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLT 318
+V NAL HVED LKY+S + + + F+FCAIPQ+MAI TLAL +NN +V G VK+R+G T
Sbjct: 275 LVLNALGHVEDVLKYLSCIHEQSTFQFCAIPQVMAIATLALVFNNPKVLHGNVKIRKGTT 334
Query: 319 AKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
+I + ++ F + ++ ++ +DPN K + I K
Sbjct: 335 CYLILHSRTLSGCVNIFEYYLRDIRKRLPVSDPNYLKINIQAAKIDK 381
>gi|121709455|ref|XP_001272424.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
clavatus NRRL 1]
gi|119400573|gb|EAW10998.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
clavatus NRRL 1]
Length = 471
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 215/367 (58%), Gaps = 27/367 (7%)
Query: 8 LRHPDDLYPLLKLKM-------ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
L HP +L +L+ K+ +AE + + C+ L K SRSF+ VI++L
Sbjct: 11 LFHPSELRSILQWKIWHNPVHERDEKAESETLKQ-----CFHFLDKTSRSFSAVIKELHP 65
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VL 118
+L VCIFYL LR LDT+EDDTSIP K P+L F + W+F+ E K L
Sbjct: 66 ELLAPVCIFYLTLRGLDTIEDDTSIPLATKEPLLRGFKDFLEQDGWNFTGNRPEEKDREL 125
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYV 172
+ QF V F ++ YQ I+DIT RMG GMA + K V+++++YD YC+YV
Sbjct: 126 LVQFQCVIAEFKKMKPAYQAIIKDITDRMGNGMADYCRKAAQDDASVKTVEEYDLYCWYV 185
Query: 173 AGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF + + L L SMGLFLQKTNIIRD ED ++ R FWP
Sbjct: 186 AGLVGEGLTRLFVEAEFGNPALLKRPELYKSMGLFLQKTNIIRDIREDFDDR---RQFWP 242
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWSK+V KLEDL EN + A+ C ++MV NAL H E+CL Y++ LR+ ++F FCAIP
Sbjct: 243 KEIWSKHVTKLEDLFKPENREAALNCSSEMVLNALGHAEECLFYLAGLREQSVFNFCAIP 302
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINK 348
Q MAI TL+LC+ N +F +K+ +G + ++ T N+ +Y AF + + K
Sbjct: 303 QSMAIATLSLCFRNPAIFERNIKITKGEACTLMVESTQNLRILYEAFRRYVREIHRKNTP 362
Query: 349 NDPNATK 355
DPN K
Sbjct: 363 KDPNFLK 369
>gi|187424525|gb|ACD03847.1| squalene synthase [Saccharomyces cerevisiae]
Length = 444
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 223/379 (58%), Gaps = 18/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP ++ LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPVEMKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWS+Y +L+D EN + C+N +V NAL HV D L Y++ + + + F+FC
Sbjct: 237 FWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVIDVLTYLAGIHEQSTFQFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TL L +NN EV G VK+R+G T +I ++ + F + +K K+
Sbjct: 297 AIPQVMAIATLVLVFNNREVLHGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKL 356
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K ++ I++
Sbjct: 357 AVQDPNFLKLNIQISKIEQ 375
>gi|70982564|ref|XP_746810.1| farnesyl-diphosphate farnesyltransferase [Aspergillus fumigatus
Af293]
gi|66844434|gb|EAL84772.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
fumigatus Af293]
gi|159122950|gb|EDP48070.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
fumigatus A1163]
Length = 471
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 215/357 (60%), Gaps = 17/357 (4%)
Query: 10 HPDDLYPLLKLKMASRQA-EKQIPPEPHWA-FCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP +L +L+ K+ E+ E A C+ L SRSF+ VI++L +L +C
Sbjct: 13 HPSELRSILQWKIWHNPVHERDESNESETAKTCFKFLDLTSRSFSAVIKELHPELLLPMC 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
IFYL LR LDT+EDDTSIP + K P+L F + W+F+ E K L+ QFH+V
Sbjct: 73 IFYLTLRGLDTIEDDTSIPLETKEPLLRGFKDVLEQDGWNFTGNRPEEKDRELLVQFHNV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGLVGLG 179
T F L Y+ I+DIT++MG GMA + K V+++++YD YC+YVAGLVG G
Sbjct: 133 ITEFKRLKPAYKAVIKDITEKMGNGMADYCRKAALDDASVKTVEEYDLYCWYVAGLVGEG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++LF + + L L SMGLFLQKTNIIRD ED ++ R FWP+EIWSK+
Sbjct: 193 STRLFVEAEFGNPALLKRTELYKSMGLFLQKTNIIRDVREDFDD---GRQFWPKEIWSKH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V EDL EN + A+ C ++MV NAL H E+CL Y++ LR+ ++F FCAIPQ MAI T
Sbjct: 250 VTNFEDLFKPENREAALNCSSEMVLNALRHAEECLFYLAGLREQSVFNFCAIPQSMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
L+LC+ N +F +K+++G ++ ++ T N+ +Y AF ++ + K DPN
Sbjct: 310 LSLCFRNPAIFERNIKIKKGEACQLMMESTQNLRILYEAFRRYAREIHKKNTPKDPN 366
>gi|327298643|ref|XP_003234015.1| squalene synthetase [Trichophyton rubrum CBS 118892]
gi|326464193|gb|EGD89646.1| squalene synthetase [Trichophyton rubrum CBS 118892]
Length = 471
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 214/363 (58%), Gaps = 23/363 (6%)
Query: 10 HPDDLYPLLKLK-----MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
HP +L +++ + +R K+ E CY L SRSF+ VI +L +L
Sbjct: 12 HPQELRAIIQWTTYHEPVHTRDPSKETETEKK---CYEFLKLTSRSFSAVIMELHPELLM 68
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQF 122
VC+FYL+LR LDTVEDDTSIP + K PIL F + + W F+ E K L+ QF
Sbjct: 69 PVCLFYLILRGLDTVEDDTSIPLETKEPILRGFKDILEEDGWTFTENRPEEKDRELLVQF 128
Query: 123 HHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLV 176
H+V T F ++ Y+ I+DIT++MG GMA +I + V++++DYD YCYYVAGLV
Sbjct: 129 HNVITEFKKIKPAYKVIIKDITEKMGNGMADYIRRGEEDDEIVKTVEDYDLYCYYVAGLV 188
Query: 177 GLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++LF +G E L L SMG FLQKTNIIRD ED ++ R FWPREIW
Sbjct: 189 GEGLTRLFVEAGFARPELLERPELFISMGRFLQKTNIIRDVREDHDDK---RRFWPREIW 245
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
S++V + DL E +A+ C +DM+ NAL HVEDC+ Y+SALR+ ++F FC IPQ MA
Sbjct: 246 SRHVKEFSDLFKPEFRQQALNCNSDMILNALSHVEDCIYYLSALREQSVFNFCCIPQTMA 305
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
I TL LC+ N +F +K+ +G ++ ID T N+ F ++ + K DPN
Sbjct: 306 ISTLELCFRNGTMFERNIKITKGTACRLMIDSTQNVRVACDVFRRYARAIHQKNTSKDPN 365
Query: 353 ATK 355
K
Sbjct: 366 FLK 368
>gi|45198962|ref|NP_985991.1| AFR444Cp [Ashbya gossypii ATCC 10895]
gi|51701405|sp|Q752X9.1|FDFT_ASHGO RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|44985037|gb|AAS53815.1| AFR444Cp [Ashbya gossypii ATCC 10895]
gi|374109220|gb|AEY98126.1| FAFR444Cp [Ashbya gossypii FDAG1]
Length = 441
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 215/373 (57%), Gaps = 25/373 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE-----PHWAFCYSMLHKVSRSFALVI 55
MG + + HP +L LKLK E P + CY +L + SRSFA VI
Sbjct: 1 MGKVVQLFTHPLELKAALKLKFLR---EPLYPADDTQGSAELKRCYQLLQRTSRSFAAVI 57
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTK 113
+L +LRNAV +FYL+LRALDTVEDD +I VKVP+L F + + W F + T+
Sbjct: 58 MELHPELRNAVMLFYLILRALDTVEDDMTISPKVKVPLLREFDQKLKLDTWSFDGNAKTE 117
Query: 114 EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDE 167
+ + ++ +F + F +L YQ I DIT +MG GMA +I E +E+I DYD
Sbjct: 118 KDRDVLVEFSTILAEFHKLKPEYQQVIADITHKMGNGMADYILDEKFNLSGLETIQDYDR 177
Query: 168 YCYYVAGLVGLGLSKL-----FYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIP 222
YC+YVAGLVG GL+ L F + G +PD L SMGLFLQKTNIIRDY ED+ +
Sbjct: 178 YCHYVAGLVGDGLTHLIMLAKFSSPGLYYDSPD-LYESMGLFLQKTNIIRDYAEDLAD-- 234
Query: 223 KCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
R FWP+EIWS Y + L EN+ V C+N +V NAL HV+ L Y+++LR+ +
Sbjct: 235 -GRSFWPKEIWSHYADDLASFSKPENATAGVYCINHLVLNALGHVQHVLTYLASLREQSS 293
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F+FCAIPQ+MAI TLAL + N V + VK+R+G T +I ++ F + +
Sbjct: 294 FQFCAIPQVMAIATLALVFGNERVLQTSVKIRKGTTCYLILKSRTFQGCVEIFEHYLRDI 353
Query: 343 KPKINKNDPNATK 355
+ ++ DPN K
Sbjct: 354 RKRLTVADPNYLK 366
>gi|302507968|ref|XP_003015945.1| hypothetical protein ARB_06257 [Arthroderma benhamiae CBS 112371]
gi|291179513|gb|EFE35300.1| hypothetical protein ARB_06257 [Arthroderma benhamiae CBS 112371]
Length = 436
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 200/328 (60%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L SRSF+ VI +L +L VC+FYL+LR LDTVEDDTSIP + K PIL F
Sbjct: 9 CYEFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTVEDDTSIPLETKEPILRGFKD 68
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ + W F+ E K L+ QFH+V T F ++ Y+ I+DIT++MG GMA +I +
Sbjct: 69 ILEEDGWTFTGNRPEEKDRELLVQFHNVITEFKKIKPAYKVIIKDITEKMGNGMADYIRR 128
Query: 158 E------VESIDDYDEYCYYVAGLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKT 208
V++I+DYD YCYYVAGLVG GL++LF +G E L L SMG FLQKT
Sbjct: 129 GQEDDEIVKTIEDYDLYCYYVAGLVGEGLTRLFVEAGFARPELLERPELFISMGRFLQKT 188
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWPREIWS++V + DL E +A+ C DM+ NAL HVE
Sbjct: 189 NIIRDVREDHDDK---RRFWPREIWSRHVKEFSDLFKPEFRPQALNCNADMILNALSHVE 245
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
DC+ Y+SALR+ ++F FC IPQ MAI TL LC+ N +F +K+ +G ++ ID T N
Sbjct: 246 DCIYYLSALREQSVFNFCCIPQTMAISTLELCFRNGTMFERNIKITKGTACRLMIDSTQN 305
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ F ++ + K DPN K
Sbjct: 306 VRVACDVFRRYARAIHQKNTSKDPNFLK 333
>gi|50543526|ref|XP_499929.1| YALI0A10076p [Yarrowia lipolytica]
gi|51701459|sp|Q9Y753.1|FDFT_YARLI RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|4545132|gb|AAD22408.1|AF092497_1 squalene synthase [Yarrowia lipolytica]
gi|49645794|emb|CAG83856.1| YALI0A10076p [Yarrowia lipolytica CLIB122]
Length = 445
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 219/368 (59%), Gaps = 22/368 (5%)
Query: 1 MGSLAAVLRHPDDL-----YPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVI 55
MG L +L HP +L Y L + + R K+ CY +L SRSFA VI
Sbjct: 1 MGKLIELLLHPSELSAAIHYKLWRQPLHPRDLSKE---STELRRCYELLDVCSRSFAAVI 57
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTK 113
++L ++R+AV +FYL+LRALDT+EDD ++ D+K+PIL F + + W F S +
Sbjct: 58 RELHPEVRDAVMLFYLILRALDTIEDDMTLSRDIKIPILRDFTKCMKTPGWKFTDSDPNE 117
Query: 114 EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDE 167
+V++ +F V T F +L YQ+ I DIT RMG GMA ++ + V++I YD
Sbjct: 118 RDRVVLQEFPVVMTEFNKLKPKYQEVIYDITDRMGNGMADYVIDDDFNNNGVDTIAAYDL 177
Query: 168 YCYYVAGLVGLGLSKL--FYASGTEDLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YC++VAG+VG GL+++ GT+ L + L SMGLFLQK NIIRDY EDI+
Sbjct: 178 YCHHVAGIVGEGLTRITILAGFGTDVLHENPRLQESMGLFLQKVNIIRDYREDID---VN 234
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWPREIW KY ++ D K + S KA+ C +D+V NAL H DCL Y+ + D + F
Sbjct: 235 RAFWPREIWHKYAEEMRDFKDPKYSKKALHCTSDLVANALGHATDCLDYLDNVTDPSTFT 294
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MAI TL L Y N +VF+ VK+R+G T +I +N++ V F ++ +
Sbjct: 295 FCAIPQVMAIATLDLVYRNPDVFQKNVKLRKGTTVSLILEASNVSGVCDIFTRYARKVYK 354
Query: 345 KINKNDPN 352
K + NDPN
Sbjct: 355 KSDPNDPN 362
>gi|402223778|gb|EJU03842.1| squalene synthase [Dacryopinax sp. DJM-731 SS1]
Length = 490
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 222/385 (57%), Gaps = 25/385 (6%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAEKQIPPE---PHW-----AFCYSMLHKVSRSFALVI 55
L + RHP++L L + + + E P E W C++ L SRSFA+VI
Sbjct: 8 LYLLFRHPNELRALAQYWVWTDNRELSDPKELASTGWDRESMRTCWAYLDMTSRSFAVVI 67
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC-GTKE 114
+ L DL +C+FYL LRALDT+EDD +IP +VK P+L F++ + + W+F+ G ++
Sbjct: 68 KNLQGDLARIICLFYLTLRALDTIEDDMTIPVEVKQPLLRDFYKRLDEEGWNFTGNGPEK 127
Query: 115 YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV--------ESIDDYD 166
+ + F V + K + I DITK+ G GMA F C V E+I++YD
Sbjct: 128 DRDVCVHFDVVIQELARIPKSCFEVIRDITKKTGKGMADF-CDRVSPGRSFYVETIEEYD 186
Query: 167 EYCYYVAGLVGLGLSKLFYASGTE-DLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPK 223
YC+ VAGLVG GLS+LF A+G E + D L SNS GLFLQKTNI RDY ED+++
Sbjct: 187 LYCHCVAGLVGEGLSRLFAATGKEQEWIADQLELSNSCGLFLQKTNITRDYREDVDD--- 243
Query: 224 CRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
R FWPREIW K+ +++LK E +AV LN MV +AL H D L Y++ L++ ++
Sbjct: 244 GRFFWPREIWGKFGFADIKELKEREKEQQAVFALNGMVLDALRHSVDSLDYLTMLKNQSV 303
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F F AIPQ+MAI TLALCY N EV + VK+RRG T +++ + N DV F DF +
Sbjct: 304 FNFVAIPQVMAIATLALCYGNPEVLQRNVKIRRGQTVQLMQKATNPRDVAYVFRDFGRRI 363
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K DPN K I++ C
Sbjct: 364 HAKSLPQDPNYLKISVACGKIEQWC 388
>gi|302666861|ref|XP_003025026.1| hypothetical protein TRV_00831 [Trichophyton verrucosum HKI 0517]
gi|291189106|gb|EFE44415.1| hypothetical protein TRV_00831 [Trichophyton verrucosum HKI 0517]
Length = 436
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 200/328 (60%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L SRSF+ VI +L +L VC+FYL+LR LDTVEDDTSIP + K PIL F
Sbjct: 9 CYEFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTVEDDTSIPLETKEPILRGFKD 68
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ + W F+ E K L+ QFH+V T F ++ Y+ I+DIT++MG GMA +I +
Sbjct: 69 ILEEDGWTFTGNRPEEKDRELLVQFHNVITEFKKIKPAYKVIIKDITEKMGNGMADYIRR 128
Query: 158 E------VESIDDYDEYCYYVAGLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKT 208
V++I+DYD YCYYVAGLVG GL++LF +G E L L SMG FLQKT
Sbjct: 129 GQEDDEIVKTIEDYDLYCYYVAGLVGEGLTRLFVEAGFARPELLERPELFISMGRFLQKT 188
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWPREIWS++V + DL E +A+ C DM+ NAL HVE
Sbjct: 189 NIIRDVREDHDDK---RRFWPREIWSRHVKEFGDLFKPEFRQQALNCNADMILNALSHVE 245
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
DC+ Y+SALR+ ++F FC IPQ MAI TL LC+ N +F +K+ +G ++ ID T N
Sbjct: 246 DCIYYLSALREQSVFNFCCIPQTMAISTLELCFRNGTMFERNIKITKGTACRLMIDSTQN 305
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ F ++ + K DPN K
Sbjct: 306 VRVACDVFRRYARAIHQKNTSKDPNFLK 333
>gi|190348562|gb|EDK41034.2| hypothetical protein PGUG_05132 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 227/385 (58%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQL 58
MG + +L+HPD+L ++ K + P E + C +L+ SRSFA VI++L
Sbjct: 1 MGKVLQLLQHPDELKAFVQFKCFRKSLHPFEPTEARSSLKRCDDLLNLTSRSFAAVIKEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG---TKEY 115
R AV +FYLVLRALDTVEDD ++ DVK+P+L FH + ++ F+ K+
Sbjct: 61 HPKTRVAVMVFYLVLRALDTVEDDMTLQHDVKIPLLRQFHTKLNTTDYSFNGSGPNEKDR 120
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+VL+ QF + + L +QD I++IT +MG GMA +I + V ++ DYD YC
Sbjct: 121 EVLV-QFPEILAEYHRLDSEFQDVIKEITDKMGNGMADYILDDNFNTNGVATVKDYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASG--TEDLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+K+ + E L D+ S SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTKIMAHANFINESLNQDNYQKSESMGLFLQKTNIIRDYQEDMQD---GR 236
Query: 226 MFWPREIWSKYVNKLEDL---KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWP+EIWSKY N L + E++ ++A+ C++++V NA+ H+ D L Y++ + D +
Sbjct: 237 SFWPQEIWSKYTNSLASFHKDQSEKSQEQALYCISELVLNAMNHINDVLVYLANVNDPSC 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MA+ TLA YNN +V VVK+R+G T K+I + V F + I+
Sbjct: 297 FSFCAIPQVMAVATLATVYNNPDVTHKVVKIRKGTTVKLILESRTYPGVVRIFRHYIRII 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K NDPN + + +++ C
Sbjct: 357 NHKSRVNDPNYLQIGLKCGELEQLC 381
>gi|51701378|sp|O74165.1|FDFT_PICJA RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|3341974|dbj|BAA31938.1| squalene synthase [Pichia jadinii]
Length = 443
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 221/377 (58%), Gaps = 19/377 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQL 58
MG L + HPD+L +++ K+ + + P CY +L+ SRSFA VI++L
Sbjct: 1 MGKLLQLALHPDELASIVQFKLFRKNENARNPATESAELIRCYELLNLTSRSFAAVIEEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK-- 116
+LRN + +FYLVLRALDTVE D SI VK+P+L FH + ++W F + K
Sbjct: 61 HPELRNVIMVFYLVLRALDTVEVDMSIENSVKLPVLRQFHEKLDTKDWTFDGNSPNEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
++ +F + + EL YQ I++IT++MG GMA +I E + +I+DYD YCY
Sbjct: 121 CVLVEFDRILGQYHELKPQYQKVIKEITEKMGNGMADYIENENFNSNGLLTIEDYDLYCY 180
Query: 171 YVAGLVGLGLSKLFYAS--GTEDLAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
YVAGLVG GL++L + G +L+ + L SMGLFLQKTNIIRDY ED + R F
Sbjct: 181 YVAGLVGDGLTQLIVLAKFGNSELSVNKQLFKSMGLFLQKTNIIRDYEEDQVD---GRAF 237
Query: 228 WPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 287
WP+EIW KY N+L D EN + + C++++V NAL HV D L+Y++ + + F FCA
Sbjct: 238 WPKEIWGKYANELSDFMKPENQSQGLWCISELVCNALDHVIDVLQYLALVEEQTSFNFCA 297
Query: 288 IPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN 347
IPQ+MAI TL L + N +V VK+R+G T +I + + F + + K +
Sbjct: 298 IPQVMAIATLELVFQNPQVLTQHVKIRKGTTVSLILESRTLEGCARIFRRYLRKIHHKSH 357
Query: 348 KNDPNATK---TLSRVE 361
+DPN + T+ ++E
Sbjct: 358 PSDPNYLRLGITIGKIE 374
>gi|254570851|ref|XP_002492535.1| Farnesyl-diphosphate farnesyl transferase (squalene synthase)
[Komagataella pastoris GS115]
gi|238032333|emb|CAY70356.1| Farnesyl-diphosphate farnesyl transferase (squalene synthase)
[Komagataella pastoris GS115]
Length = 442
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 205/336 (61%), Gaps = 18/336 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQL 58
MG LA ++ HP +L ++ K + + P CY +L SRSF VI +L
Sbjct: 1 MGKLAQLVLHPLELRAAIQFKFFKQSLHPRQPTNERETLKHCYELLALTSRSFCTVILEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF---SCGTKEY 115
+LRNA+ IFYLVLRALDTVEDD +I D+K+P+L +F + + W F S K+
Sbjct: 61 NPELRNAIMIFYLVLRALDTVEDDMTIKPDIKIPLLRSFDEKLNLKSWSFDGNSPDEKDR 120
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+VL+D F V + L YQD I+DIT +MG GMA +I E V ++ DYD YC
Sbjct: 121 QVLVD-FTDVLEEYHRLKPVYQDVIKDITHKMGNGMADYITDEEFNLNGVATVKDYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL+ L +G D + LS SMGLFLQKTNIIRDY ED+++ R
Sbjct: 180 HYVAGLVGEGLTHLIVEAGFGDPKLEDNMQLSESMGLFLQKTNIIRDYREDLDD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+EIWSKY + L D EN +K + C++++V N + H++D L Y+S++ D + + FC
Sbjct: 237 FWPKEIWSKYADSLSDFSKRENYEKGLDCISELVLNTMDHIKDVLVYLSSVYDFSSYNFC 296
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI 322
IPQ+MAI TLA + N +VF VK+R+G T +I
Sbjct: 297 VIPQVMAIATLATVFRNEKVFETNVKIRKGTTCYLI 332
>gi|410084737|ref|XP_003959945.1| hypothetical protein KAFR_0L01990 [Kazachstania africana CBS 2517]
gi|372466538|emb|CCF60810.1| hypothetical protein KAFR_0L01990 [Kazachstania africana CBS 2517]
Length = 447
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 220/378 (58%), Gaps = 16/378 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKM--ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG L HP +L +KL+ + + P CY +L + SRSFA VI +L
Sbjct: 1 MGKLLDFALHPIELKAAIKLRFLRSPLYSINDTRATPDLVECYKLLKQTSRSFATVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK-- 116
+LRN + +FYL+LRALDTVEDD +I D+K+ +L F++ + ++W+F + K
Sbjct: 61 HPELRNVIMLFYLILRALDTVEDDMTIEHDLKIDLLRNFYKKLDLQKWNFEGNAENEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
++ +F + F +L Y+ I++IT MG GMA +I E V++I DYD YC+
Sbjct: 121 AVLVEFASILREFHKLKDDYKAVIKEITMEMGNGMADYIQDENFNLNGVQTIKDYDTYCH 180
Query: 171 YVAGLVGLGLSKLFYAS--GTEDLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
YVAGLVG GL++L + G+ LA ++ L SMGLFLQKTNIIRDY ED+ R F
Sbjct: 181 YVAGLVGDGLTQLIVLANFGSNSLANETQLFESMGLFLQKTNIIRDYAEDLE---AGRSF 237
Query: 228 WPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 287
WP+EIWS Y KL D + K V C+N +V NAL HVED L Y+S++ + + F+FCA
Sbjct: 238 WPKEIWSMYAEKLTDFQDPYMERKGVDCMNHLVLNALGHVEDVLNYLSSIHEQSTFQFCA 297
Query: 288 IPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKIN 347
IPQ+MAI TLAL + N V R VK+R+G T +I ++ F ++ ++ K+
Sbjct: 298 IPQVMAIATLALVFENPSVLRRNVKIRKGTTCYLILKSRTFRGCVEIFEEYLREIRSKLQ 357
Query: 348 KNDPNATKTLSRVEAIQK 365
DPN K +V I +
Sbjct: 358 VEDPNYLKINIQVSKIDQ 375
>gi|365991265|ref|XP_003672461.1| hypothetical protein NDAI_0K00290 [Naumovozyma dairenensis CBS 421]
gi|343771237|emb|CCD27218.1| hypothetical protein NDAI_0K00290 [Naumovozyma dairenensis CBS 421]
Length = 445
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 225/386 (58%), Gaps = 28/386 (7%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI--PPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG L HP +L +LK R I P+ CY +L+ SRSFA VI +L
Sbjct: 1 MGKAIDFLIHPLELKAAFQLKYI-RNPLFYIDSTASPNEKECYKLLNLTSRSFAAVIMEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK-- 116
+LRN + +FYL+LRALDT+EDD SI T +KV +L FH + +EW F+ + + K
Sbjct: 60 HPELRNVIMVFYLILRALDTMEDDMSIDTKLKVELLRDFHEKLDLKEWSFNGNSPDEKDR 119
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
++ +F + F +L K Y+D I+DITK+MG GMA +I E VE+I DYD+YC+
Sbjct: 120 AVLVKFDCILHEFHKLSKKYRDVIQDITKQMGNGMADYILDENFNLNGVETIADYDKYCH 179
Query: 171 YVAGLVGLGLSKLFYASGTEDLAPDSLSN-----------SMGLFLQKTNIIRDYLEDIN 219
YVAGLVG GL++L + AP SL + SMGLFLQKTNIIRDY ED++
Sbjct: 180 YVAGLVGDGLTRLIILA---QFAPMSLYDLEKDKELPSYESMGLFLQKTNIIRDYAEDLH 236
Query: 220 EIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRD 279
+ R FWP+EIWS Y +KL D + N K ++C+N +V NAL HV+ L Y+S++ +
Sbjct: 237 D---GRSFWPQEIWSLYADKLTDFQQTGNEQKGLECINHLVYNALSHVDAVLNYLSSIHE 293
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFS 339
+ F+FCAIPQ+MAI TLA +NN V VK+R+G T +I ++ + F +
Sbjct: 294 QSTFQFCAIPQVMAIATLAKVFNNPTVLHKNVKIRKGTTCYLILKSRTLKGCVEIFEYYL 353
Query: 340 NILKPKINKNDPNATKTLSRVEAIQK 365
++ ++ DPN K V I +
Sbjct: 354 RDIRKRLPVEDPNYLKINIEVARIDQ 379
>gi|50294490|ref|XP_449656.1| hypothetical protein [Candida glabrata CBS 138]
gi|51704336|sp|Q9HGZ6.2|FDFT_CANGA RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|49528970|emb|CAG62632.1| unnamed protein product [Candida glabrata]
Length = 443
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 223/381 (58%), Gaps = 19/381 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG + + HP +L LKLK + + P CY +L+ SRSFA VI +L
Sbjct: 1 MGKVLDLALHPLELRAALKLKFIRQPLFSTNDTRATPQLERCYELLNLTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG--TKEYK 116
+LRN + +FYL+LRALDTVEDD +I +KV +L F + +W F ++ +
Sbjct: 61 HPELRNVIMVFYLILRALDTVEDDMTIDPQLKVKVLREFDSKLDTTDWSFDGNDLKEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
V++ +F + + +L YQ I+ IT MG GMA +I E V+++ DYD+YC+
Sbjct: 121 VVLTEFPCILGEYHKLKPEYQKVIKRITGLMGNGMADYILDENFNLNGVQTVKDYDKYCH 180
Query: 171 YVAGLVGLGLSKLFYASG--TEDLAPD----SLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YVAGLVG GL++L +G ++DL L SMGLFLQKTNIIRDY ED+++
Sbjct: 181 YVAGLVGDGLTELIVLAGFGSDDLYHGKNSFQLYESMGLFLQKTNIIRDYAEDLDD---G 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWP+EIWS+Y KL D + +N+ K V C+N +V NAL HV D L Y+S++ + + F+
Sbjct: 238 RSFWPKEIWSEYATKLTDFRDPKNTQKGVDCINHLVLNALTHVIDVLTYLSSIHEQSSFQ 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MAI TLA +NN EV R VK+R+G T +I + + F + +K
Sbjct: 298 FCAIPQVMAIATLAKVFNNPEVLRKNVKIRKGTTCDLILNSRTLKGCVDIFQYYLRDMKQ 357
Query: 345 KINKNDPNATKTLSRVEAIQK 365
++ DPN K +V I++
Sbjct: 358 RLPVEDPNYLKFNIQVAKIEQ 378
>gi|323304652|gb|EGA58415.1| Erg9p [Saccharomyces cerevisiae FostersB]
gi|323308714|gb|EGA61953.1| Erg9p [Saccharomyces cerevisiae FostersO]
gi|323333208|gb|EGA74607.1| Erg9p [Saccharomyces cerevisiae AWRI796]
gi|323348206|gb|EGA82456.1| Erg9p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354715|gb|EGA86550.1| Erg9p [Saccharomyces cerevisiae VL3]
gi|365765282|gb|EHN06794.1| Erg9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 431
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 211/342 (61%), Gaps = 14/342 (4%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P+ C+ +L+ SRSFA VI++L +LRN V +FYL+LRALDT+EDD SI D+K+ +L
Sbjct: 24 PYLLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLL 83
Query: 95 IAFHRHVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
FH + +W F + K ++ F + F +L YQ+ I++IT++MG GMA
Sbjct: 84 RHFHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMA 143
Query: 153 KFICKE------VESIDDYDEYCYYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGL 203
+I E ++++ DYD YC+YVAGLVG GL++L + E L + + L SMGL
Sbjct: 144 DYILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGL 203
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
FLQKTNIIRDY ED+ + R FWP+EIWS+Y +L+D EN + C+N +V NA
Sbjct: 204 FLQKTNIIRDYNEDLVD---GRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNA 260
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVID 323
L HV D L Y++++ + + F+FCAIPQ+MAI TLAL +NN EV G VK+R+G T +I
Sbjct: 261 LSHVIDVLTYLASIHEQSTFQFCAIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLIL 320
Query: 324 RTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
++ + F + +K K+ DPN K ++ I++
Sbjct: 321 KSRTLRGCVEIFDYYLRDIKSKLAVQDPNFLKLNIQISKIEQ 362
>gi|119488620|ref|XP_001262760.1| farnesyl-diphosphate farnesyltransferase, putative [Neosartorya
fischeri NRRL 181]
gi|119410918|gb|EAW20863.1| farnesyl-diphosphate farnesyltransferase, putative [Neosartorya
fischeri NRRL 181]
Length = 471
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 215/357 (60%), Gaps = 17/357 (4%)
Query: 10 HPDDLYPLLKLKMASRQA-EKQIPPEPHWA-FCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP +L +L+ K+ E+ E A C+ L SRSF+ VI++L +L +C
Sbjct: 13 HPSELRSILQWKIWHNPVHERDESNESDTAKTCFKFLDLTSRSFSAVIKELHPELLLPMC 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
IFYL LR LDT+EDDTSIP + K P+L F + W+F+ E K L+ QFH+V
Sbjct: 73 IFYLTLRGLDTIEDDTSIPLETKEPLLRGFKDILEQDGWNFTGNRPEEKDRELLVQFHNV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGLVGLG 179
F +L Y+ I+DIT++MG GMA + K V+++++YD YC+YVAGLVG G
Sbjct: 133 IAEFKKLKPAYKAVIKDITEKMGNGMADYCRKAALDDASVKTVEEYDLYCWYVAGLVGEG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++LF + + L L SMGLFLQKTNIIRD ED ++ R FWP+EIWSK+
Sbjct: 193 STRLFVEAEFGNPALLKRTELYKSMGLFLQKTNIIRDVREDFDD---GRQFWPKEIWSKH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V EDL EN + A+ C ++MV NAL H E+CL Y++ LR+ ++F FCAIPQ MAI T
Sbjct: 250 VTDFEDLFKPENREAALNCGSEMVLNALGHAEECLFYLAGLREQSVFNFCAIPQSMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
L+LC+ N +F +K+++G ++ ++ T N+ +Y AF ++ + K DPN
Sbjct: 310 LSLCFRNPAIFERNIKIKKGEACQLMMESTQNLRILYEAFRKYAREIHKKNTPKDPN 366
>gi|315041815|ref|XP_003170284.1| squalene synthetase [Arthroderma gypseum CBS 118893]
gi|311345318|gb|EFR04521.1| squalene synthetase [Arthroderma gypseum CBS 118893]
Length = 471
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 200/328 (60%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L SRSF+ VI +L +L VC+FYL+LR LDTVEDDTSIP + K PIL F
Sbjct: 44 CYHFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTVEDDTSIPLETKEPILRGFKD 103
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ + W F+ E K L+ QFH+V T F ++ Y+ I+DIT +MG GMA +I +
Sbjct: 104 ILEEDGWTFTGNRPEEKDRELLVQFHNVITEFKKIKPAYKVIIKDITDKMGNGMADYIRR 163
Query: 158 E------VESIDDYDEYCYYVAGLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKT 208
V++++DYD YCYYVAGLVG GL++LF +G E L L SMG FLQKT
Sbjct: 164 GEEDDEIVKTVEDYDLYCYYVAGLVGEGLTRLFVEAGFARPELLERPDLFISMGRFLQKT 223
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWPREIWS++V + DL E +A+ C +DM+ NAL HVE
Sbjct: 224 NIIRDVREDHDDK---RRFWPREIWSRHVKEFSDLFKPEFRQQALNCNSDMILNALSHVE 280
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
DC+ Y+SAL++ ++F FC IPQ MAI TL LC+ N +F +K+ +G ++ ID T N
Sbjct: 281 DCIYYLSALKEQSVFNFCCIPQTMAISTLELCFRNGSMFERNIKITKGTACRLMIDSTQN 340
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ F ++ + K DPN K
Sbjct: 341 VRVACDVFRRYARAIHQKNTSKDPNFLK 368
>gi|425773331|gb|EKV11689.1| hypothetical protein PDIP_55100 [Penicillium digitatum Pd1]
gi|425778905|gb|EKV17006.1| hypothetical protein PDIG_17200 [Penicillium digitatum PHI26]
Length = 473
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 204/328 (62%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C L K SRSF+ VI++L +L +CIFYL LR LDT+EDDTSIP K P+L F
Sbjct: 45 CLKFLDKTSRSFSAVIKELHPELLIPICIFYLALRGLDTIEDDTSIPLPTKEPLLRNFKD 104
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W+F+ E K L+ +F+HV T F+ + YQ ++DIT++MG GMA + K
Sbjct: 105 FLTQDGWNFTGNRPEEKDRELLVRFNHVITEFMNMKPEYQAIVKDITEKMGNGMADYAVK 164
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V++ ++YD YCYYVAGLVG GL++LF +G + L L SMGLFLQKT
Sbjct: 165 AENDDASVKTKEEYDLYCYYVAGLVGEGLTRLFVEAGFGNPALLKRPKLHKSMGLFLQKT 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWP+EIWSK+V+ EDL E+ D A+ C ++MV NAL H E
Sbjct: 225 NIIRDIREDFDD---NRRFWPQEIWSKHVDNFEDLFKPEHLDAALNCSSEMVLNALEHAE 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNN 327
+CL Y++ +R+ ++F FCAIPQ MAI T+ LC+ N E+F+ +K+ +G ++ + T N
Sbjct: 282 ECLFYLAGMREQSVFNFCAIPQSMAIATMELCFRNPEIFKRNIKITKGDACDLMHKSTQN 341
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
++ + +F ++ + K DPN K
Sbjct: 342 LSVLCDSFRQYTRKIHKKNTPKDPNFLK 369
>gi|296818525|ref|XP_002849599.1| squalene synthetase [Arthroderma otae CBS 113480]
gi|238840052|gb|EEQ29714.1| squalene synthetase [Arthroderma otae CBS 113480]
Length = 471
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 209/363 (57%), Gaps = 23/363 (6%)
Query: 10 HPDDLYPLLKLK-----MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
HP +L +++ + +R + P E CY L SRSF VI +L +L
Sbjct: 12 HPQELRSIIQWTTYHEPVHTRDPSSETPTEKK---CYEFLKLTSRSFYAVIMELHPELLM 68
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQF 122
+C+FYLVLR LDTVEDDTSIP D K P+L F + + W F+ E K L+ QF
Sbjct: 69 PICLFYLVLRGLDTVEDDTSIPLDSKEPLLRGFKDILEEDGWSFTGNRPEEKDRELLVQF 128
Query: 123 HHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLV 176
H+V T F ++ Y+ I+DI +MG GMA + + V++IDDYD YCYYVAGLV
Sbjct: 129 HNVITEFKKIKPAYKAIIKDIADKMGNGMADYARRGERDEEIVKTIDDYDLYCYYVAGLV 188
Query: 177 GLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++LF +G E L L SMG FLQKTNIIRD ED ++ R FWPREIW
Sbjct: 189 GEGLTRLFVEAGFARPELLDRPELFISMGRFLQKTNIIRDVREDHDDK---RRFWPREIW 245
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
S++V + DL E +A+ C +DMV NAL HVE C+ Y+SALR+ ++F FC IPQ MA
Sbjct: 246 SRHVKEFGDLFKPEFRQQALNCSSDMVLNALSHVEHCIYYLSALREQSVFNFCCIPQTMA 305
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
I TL LC+ N +F +K+ +G ++ ID T N+ F ++ + K DPN
Sbjct: 306 ISTLELCFRNGTMFERNIKITKGTACRLMIDSTQNVRVACDVFRRYARAIHQKNTSRDPN 365
Query: 353 ATK 355
K
Sbjct: 366 FLK 368
>gi|9955387|dbj|BAB12207.1| squalene synthase [Candida glabrata]
Length = 443
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 223/381 (58%), Gaps = 19/381 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG + + HP +L LKLK + + P CY +L+ SRSFA VI +L
Sbjct: 1 MGKVLDLALHPLELRAALKLKFIRQPLFSTNDTRATPQLERCYELLNLTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG--TKEYK 116
+LRN + +FYL+LRALDTVEDD +I +KV +L F + +W F ++ +
Sbjct: 61 HPELRNVIMVFYLILRALDTVEDDMTIDPQLKVKVLREFDSKLDTTDWSFDGNDLKEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
V++ +F + + +L YQ I+ IT MG GMA +I E V+++ DYD+YC+
Sbjct: 121 VVLTEFPCILGEYHKLKPEYQKVIKRITGLMGNGMADYILDENFNLNGVQTVKDYDKYCH 180
Query: 171 YVAGLVGLGLSKLFYASG--TEDLAPD----SLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YVAGLVG GL++L +G ++DL L S+GLFLQKTNIIRDY ED+++
Sbjct: 181 YVAGLVGDGLTELIVLAGFGSDDLYHGKNSFQLYESLGLFLQKTNIIRDYAEDLDD---G 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWP+EIWS+Y KL D + +N+ K V C+N +V NAL HV D L Y+S++ + + F+
Sbjct: 238 RSFWPKEIWSEYATKLTDFRDPKNTQKGVDCINHLVLNALTHVIDVLTYLSSIHEQSSFQ 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MAI TLA +NN EV R VK+R+G T +I + + F + +K
Sbjct: 298 FCAIPQVMAIATLAKVFNNPEVLRKNVKIRKGTTCDLILNSRTLKGCVDIFQYYLRDMKQ 357
Query: 345 KINKNDPNATKTLSRVEAIQK 365
++ DPN K +V I++
Sbjct: 358 RLPVEDPNYLKFNIQVAKIEQ 378
>gi|156845487|ref|XP_001645634.1| hypothetical protein Kpol_541p19 [Vanderwaltozyma polyspora DSM
70294]
gi|156116300|gb|EDO17776.1| hypothetical protein Kpol_541p19 [Vanderwaltozyma polyspora DSM
70294]
Length = 447
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 220/371 (59%), Gaps = 25/371 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQ 56
MGSL +L+HP +L L LK E +I CY +L SRSFA VIQ
Sbjct: 1 MGSLTQLLQHPLELKSALVLKYYREPLFPGEESKIANSKDLKRCYELLKLTSRSFAAVIQ 60
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG---TK 113
+L +LR+A+ IFYLVLRALDT+EDD +I VKV +L F + +W F K
Sbjct: 61 ELNPELRDAIMIFYLVLRALDTIEDDMTINPSVKVKLLNEFDEKLDLDDWSFDGNGPNEK 120
Query: 114 EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDE 167
+ VL+D F ++ + L YQ I++IT++MG GM ++ E VE+I DYD
Sbjct: 121 DRDVLVD-FPYILREYHNLKPEYQKVIKEITRKMGQGMVNYVLDESFNLNGVETIKDYDL 179
Query: 168 YCYYVAGLVGLGLSKLFYASG--TEDLAPDS----LSNSMGLFLQKTNIIRDYLEDINEI 221
YC+YVAGLVG GL++L +G E+L S L SMGLFLQKTNIIRDY ED+ +
Sbjct: 180 YCHYVAGLVGDGLTQLIVLAGFGDENLYEASGDRELYESMGLFLQKTNIIRDYAEDLED- 238
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA 281
R FWP+EIWS YV KL DL +++ ++C+N +V NAL HV D L Y++++ + +
Sbjct: 239 --GRSFWPKEIWSLYVEKLPDL--QKDKSNGLRCINHLVLNALTHVNDVLTYLASINEQS 294
Query: 282 IFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNI 341
F+FC+IPQ+MAI TL+L +NN +V VK+R+G T +I ++ + F +
Sbjct: 295 TFQFCSIPQVMAIATLSLLFNNEKVLVENVKIRKGETCYLILKSRTLKGCVEIFQYYLRE 354
Query: 342 LKPKINKNDPN 352
+K K+ DPN
Sbjct: 355 IKSKLMVEDPN 365
>gi|146414413|ref|XP_001483177.1| hypothetical protein PGUG_05132 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 226/385 (58%), Gaps = 22/385 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQL 58
MG + +L+HPD+L ++ K + P E + C +L+ SRSFA VI++L
Sbjct: 1 MGKVLQLLQHPDELKAFVQFKCFRKSLHPFEPTEARSSLKRCDDLLNLTSRSFAAVIKEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG---TKEY 115
R AV +FYLVLRALDTVEDD ++ DVK+P+L FH + ++ F+ K+
Sbjct: 61 HPKTRVAVMVFYLVLRALDTVEDDMTLQHDVKIPLLRQFHTKLNTTDYSFNGSGPNEKDR 120
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+VL+ QF + + L +QD I++IT +MG GMA +I + V ++ DYD YC
Sbjct: 121 EVLV-QFPEILAEYHRLDSEFQDVIKEITDKMGNGMADYILDDNFNTNGVATVKDYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASG--TEDLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+K+ + E L D+ S SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGEGLTKIMAHANFINESLNQDNYQKSESMGLFLQKTNIIRDYQEDMQD---GR 236
Query: 226 MFWPREIWSKYVNKLEDL---KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
FWP+EIW KY N L + E++ ++A+ C++++V NA+ H+ D L Y++ + D +
Sbjct: 237 SFWPQEIWLKYTNSLASFHKDQSEKSQEQALYCISELVLNAMNHINDVLVYLANVNDPSC 296
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MA+ TLA YNN +V VVK+R+G T K+I + V F + I+
Sbjct: 297 FSFCAIPQVMAVATLATVYNNPDVTHKVVKIRKGTTVKLILESRTYPGVVRIFRHYIRII 356
Query: 343 KPKINKNDPNATKTLSRVEAIQKAC 367
K NDPN + + +++ C
Sbjct: 357 NHKSRVNDPNYLQIGLKCGELEQLC 381
>gi|194390212|dbj|BAG61868.1| unnamed protein product [Homo sapiens]
gi|221040248|dbj|BAH14905.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 193/303 (63%), Gaps = 9/303 (2%)
Query: 84 SIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI 143
+I + KVP+L FH +Y +W F ++ + +++ F +S F L + YQ I DI
Sbjct: 2 TISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADI 61
Query: 144 TKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNS 200
+RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS+LF AS ED + D+ +NS
Sbjct: 62 CRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANS 121
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 122 MGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 178
Query: 261 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 320
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 179 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 238
Query: 321 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKIL 380
++ NM V Y + + +I +DP+++KT + I+ + + L R
Sbjct: 239 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRS--- 295
Query: 381 HYS 383
HYS
Sbjct: 296 HYS 298
>gi|261188846|ref|XP_002620836.1| squalene synthetase [Ajellomyces dermatitidis SLH14081]
gi|239591978|gb|EEQ74559.1| squalene synthetase [Ajellomyces dermatitidis SLH14081]
Length = 473
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 225/395 (56%), Gaps = 40/395 (10%)
Query: 3 SLAAVLRHPDDLYPLLKLKM-----------ASRQAEKQIPPEPHWAFCYSMLHKVSRSF 51
+L L HP +L +++ K+ S + EKQ C+ L SRSF
Sbjct: 6 TLIYYLLHPQELRSIIQWKVWHNPVHERDEKNSSETEKQ---------CFHFLKFTSRSF 56
Query: 52 ALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG 111
+ VI +L +L VC+FYLVLR LDT+EDDTSIP K P+L FH + W F+
Sbjct: 57 SAVIMELHPELLLPVCLFYLVLRGLDTIEDDTSIPLQTKEPLLRDFHNILEKDGWSFNGN 116
Query: 112 TKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESI 162
E K L+ QFH+V T F ++ Y+ I+DITK+MG+GMA + C+ +V+++
Sbjct: 117 RPEEKDRELLVQFHNVVTEFKKIKPAYRTIIKDITKKMGSGMADY-CRRAELDTAKVKTV 175
Query: 163 DDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
+YD YCYYVAG+VG GL++LF +G + L L SMGLFLQKTNIIRD ED
Sbjct: 176 KEYDLYCYYVAGIVGEGLTRLFVEAGFANPALLERTELFISMGLFLQKTNIIRDVKEDYV 235
Query: 220 EIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRD 279
+ R FWPREIWSK+V++ EDL EN + A+ C ++M+ NAL H ++CL Y++ L++
Sbjct: 236 D---NRCFWPREIWSKHVDEFEDLFKPENKEAALNCNSEMILNALEHADECLFYLAGLKE 292
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDF 338
++F FCAIPQ MAI TL LC+ N +F VK+ +G ++ T N+ + F +
Sbjct: 293 QSVFNFCAIPQSMAIATLQLCFRNDAIFERNVKITKGSACHLMFQSTQNVRAICDVFRQY 352
Query: 339 SNILKPKINKNDPNATK---TLSRVEAIQKACMDS 370
+ K DPN K +VEA ++ S
Sbjct: 353 VRKIHKKNTPKDPNFLKISVACGKVEAFIESIFPS 387
>gi|303310469|ref|XP_003065247.1| farnesyl-diphosphate farnesyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240104907|gb|EER23102.1| farnesyl-diphosphate farnesyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320033822|gb|EFW15768.1| squalene synthetase [Coccidioides posadasii str. Silveira]
Length = 472
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 214/364 (58%), Gaps = 25/364 (6%)
Query: 7 VLRHPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD 61
+L HP +L +++ K+ SR + E CY L SRSF+ VI +L +
Sbjct: 10 LLSHPQELRSIIQWKVWHEPVHSRNTANETESEKK---CYHFLKLTSRSFSAVIMELHPE 66
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLM 119
L VC+FYL+LR LDT+EDDTSIP VK P+L F + W F E K L+
Sbjct: 67 LLLPVCLFYLILRGLDTIEDDTSIPFKVKEPLLRNFKDFLEVDGWTFDGNRPEEKDRELL 126
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVE-------SIDDYDEYCYYV 172
QFH+V T F ++ Y+ I+DI RMG GMA + C++ E ++++YD YC+YV
Sbjct: 127 VQFHNVITEFKKIKPAYKAIIKDIADRMGNGMADY-CRKAEFENVNVNTVEEYDLYCWYV 185
Query: 173 AGLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF +G + L L SMGLFLQKTNIIRD ED ++ R FWP
Sbjct: 186 AGLVGEGLTRLFVEAGFARPQLLERPQLFKSMGLFLQKTNIIRDVREDEDD---NRRFWP 242
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWS +V+K EDL EN + AV C +M+ NAL HV+DCL Y++ L++ ++F FCAIP
Sbjct: 243 KEIWSNHVDKWEDLFKPENREAAVNCGAEMILNALGHVDDCLYYLAGLKEQSVFNFCAIP 302
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINK 348
Q MAIGTL LC+ N +F +K+ +G +++ T N+ + F ++ + K
Sbjct: 303 QSMAIGTLELCFRNPAMFDRNIKITKGQACRLMWQSTQNVRVICDVFRQYARAIHKKNTP 362
Query: 349 NDPN 352
DPN
Sbjct: 363 KDPN 366
>gi|323337373|gb|EGA78626.1| Erg9p [Saccharomyces cerevisiae Vin13]
Length = 431
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 210/342 (61%), Gaps = 14/342 (4%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P+ C+ +L+ SRSFA VI++L +LRN V +FYL+LRALDT+EDD SI D+K+ +L
Sbjct: 24 PYLLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLL 83
Query: 95 IAFHRHVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
FH + +W F + K ++ F + F +L YQ+ I++IT++MG GMA
Sbjct: 84 RHFHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMA 143
Query: 153 KFICKE------VESIDDYDEYCYYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGL 203
+I E ++++ DYD YC+YVAGLVG GL++L + E L + + L SMGL
Sbjct: 144 DYILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGL 203
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
FLQK NIIRDY ED+ + R FWP+EIWS+Y +L+D EN + C+N +V NA
Sbjct: 204 FLQKXNIIRDYNEDLVD---GRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNA 260
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVID 323
L HV D L Y++++ + + F+FCAIPQ+MAI TLAL +NN EV G VK+R+G T +I
Sbjct: 261 LSHVIDVLTYLASIHEQSTFQFCAIPQVMAIATLALVFNNREVLHGNVKIRKGTTCYLIL 320
Query: 324 RTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
++ + F + +K K+ DPN K ++ I++
Sbjct: 321 KSRTLRGCVEIFDYYLRDIKSKLAVQDPNFLKLNIQISKIEQ 362
>gi|239615333|gb|EEQ92320.1| squalene synthetase [Ajellomyces dermatitidis ER-3]
gi|327357686|gb|EGE86543.1| squalene synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 473
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 223/390 (57%), Gaps = 40/390 (10%)
Query: 8 LRHPDDLYPLLKLKM-----------ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQ 56
L HP +L +++ K+ S + EKQ C+ L SRSF+ VI
Sbjct: 11 LLHPQELRSIIQWKVWHNPVHERDEKNSSETEKQ---------CFHFLKFTSRSFSAVIM 61
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK 116
+L +L VC+FYLVLR LDT+EDDTSIP K P+L FH + W F+ E K
Sbjct: 62 ELHPELLLPVCLFYLVLRGLDTIEDDTSIPLQTKEPLLRDFHNILEKDGWSFNGNRPEEK 121
Query: 117 --VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDE 167
L+ QFH+V T F ++ Y+ I+DITK+MG+GMA + C+ +V+++ +YD
Sbjct: 122 DRELLVQFHNVVTEFKKIKPAYRTIIKDITKKMGSGMADY-CRRAELDTAKVKTVKEYDL 180
Query: 168 YCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YCYYVAG+VG GL++LF +G + L L SMGLFLQKTNIIRD ED +
Sbjct: 181 YCYYVAGIVGEGLTRLFVEAGFANPALLERTELFISMGLFLQKTNIIRDVKEDYVD---N 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWPREIWSK+V++ EDL EN + A+ C ++M+ NAL H ++CL Y++ L++ ++F
Sbjct: 238 RCFWPREIWSKHVDEFEDLFKPENKEAALNCNSEMILNALEHADECLFYLAGLKEQSVFN 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILK 343
FCAIPQ MAI TL LC+ N +F VK+ +G ++ T N+ + F + +
Sbjct: 298 FCAIPQSMAIATLQLCFRNDAIFERNVKITKGSACHLMFQSTQNVRAICDVFRQYVRKIH 357
Query: 344 PKINKNDPNATK---TLSRVEAIQKACMDS 370
K DPN K +VEA ++ S
Sbjct: 358 KKNTPKDPNFLKISVACGKVEAFIESIFPS 387
>gi|328851394|gb|EGG00549.1| hypothetical protein MELLADRAFT_50370 [Melampsora larici-populina
98AG31]
Length = 412
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 217/366 (59%), Gaps = 24/366 (6%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEP---HWAF---CYSMLHKVSRSFALVIQQLGTDLR 63
HP +L ++ K+ + PE H+ C++ L + SRSF+ VI+QL +L
Sbjct: 17 HPKELKAVVNYKIWHEPRSIEDDPEASRIHYKSMKECWTFLDQTSRSFSAVIKQLEGELS 76
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCG--TKEYKVLMD 120
+CIFYL+LR +DT+EDD +I +K IL F++ + + W F CG K+ +L+
Sbjct: 77 RVICIFYLILRGMDTIEDDMTIEIKLKEKILKTFYQKLEEPGWRFDGCGPDAKDRHLLLG 136
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI--------CKEVESIDDYDEYCYYV 172
F V F L Y++ I ++T RMG+GM++F ++++ +D YC+YV
Sbjct: 137 -FDSVIEEFQLLDPSYRNVISEVTARMGSGMSQFSRMAYENQGIFSIDTMTSFDSYCHYV 195
Query: 173 AGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GLS+LF S ED +LSNSMGL LQKTNI+RD+ ED+++ RMFWP
Sbjct: 196 AGLVGEGLSRLFAQSNKEDSMIGHQLTLSNSMGLLLQKTNILRDFREDVDD---GRMFWP 252
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIW+KYV +DL EN KA L +M +AL H D L+YM+ L++ +IF FCAIP
Sbjct: 253 KEIWNKYVEHPKDLTKPENLQKARWALTEMTIDALSHSTDALEYMTMLKNQSIFNFCAIP 312
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
Q+MAI TL C++N++VF VK+RR +T ++ + N D+ F DF+ + + +
Sbjct: 313 QVMAIATLEKCFDNLDVFHKNVKIRRSMTVDLMMKAVNPRDLAYIFVDFTQKIHSRARPD 372
Query: 350 DPNATK 355
DPN K
Sbjct: 373 DPNYLK 378
>gi|367009730|ref|XP_003679366.1| hypothetical protein TDEL_0B00260 [Torulaspora delbrueckii]
gi|359747024|emb|CCE90155.1| hypothetical protein TDEL_0B00260 [Torulaspora delbrueckii]
Length = 442
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 219/379 (57%), Gaps = 17/379 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASR--QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
M + +L HPD+L L LK + + P CY +L SRSFA VI +L
Sbjct: 1 MSKVLELLAHPDELKAALILKYIRKPLNSATDTTKTPELRRCYELLTLTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG--TKEYK 116
+LRN V +FYLVLRALDTVEDD ++ +KV +L F + +W F ++ +
Sbjct: 61 HPELRNVVMLFYLVLRALDTVEDDMTLDPKLKVKLLREFDSKLDTLDWSFDGNGPNEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
++ +F + + L YQ+ I++IT +MG GMA +I + V+++ DYD YC+
Sbjct: 121 AVLVEFPCILKEYHALKPAYQNIIKEITHKMGNGMADYILDDNFNLNGVQTVKDYDLYCH 180
Query: 171 YVAGLVGLGLSKLFYAS--GTEDL--APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YVAGLVG GL+++ + GT+DL + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 181 YVAGLVGDGLTQMIVHAQFGTKDLYQGNEQLYESMGLFLQKTNIIRDYAEDLED---KRS 237
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWPREIWS+Y L DL + + K +QC+N +V NAL HV D L Y+S++ + + F+FC
Sbjct: 238 FWPREIWSQYAKSLPDLAKPDQTVKGLQCINALVLNALSHVTDVLTYLSSVHEQSSFQFC 297
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+MAI TL L NN EV VK+R+G T ++I + + F +K +I
Sbjct: 298 AIPQVMAIATLDLVCNNPEVLHRNVKIRKGSTCRLILESRTLRGCVAIFQRHLRAIKRQI 357
Query: 347 NKNDPNATKTLSRVEAIQK 365
DPN K +V I++
Sbjct: 358 PVQDPNYLKINIQVAKIEQ 376
>gi|255955315|ref|XP_002568410.1| Pc21g13930 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590121|emb|CAP96290.1| Pc21g13930 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 203/328 (61%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L K SRSF+ VI++L +L +CIFYLVLR LDT+EDDTSIP K P+L F
Sbjct: 45 CFKFLDKTSRSFSAVIKELHPELLIPICIFYLVLRGLDTIEDDTSIPLATKEPLLRDFKD 104
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W F+ E K L+ QF+HV T F+ + YQ I+DIT++MG GMA + K
Sbjct: 105 ILTQDGWTFTGNRPEEKDRELLVQFNHVITEFMNMKPEYQAIIKDITEKMGNGMADYAIK 164
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V++ +YD YC+YVAGLVG GL++LF +G + L +L SMGLFLQKT
Sbjct: 165 AENDDASVKTKKEYDLYCFYVAGLVGEGLTRLFVEAGFGNPALLKRPNLHKSMGLFLQKT 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWP+EIWS +V+ EDL E+ D A+ C ++MV NAL H E
Sbjct: 225 NIIRDVREDFDD---NRRFWPQEIWSNHVDNFEDLFKPEHLDAALNCSSEMVLNALEHAE 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNN 327
+CL Y++ +R+ ++F FCAIPQ MAI T+ LC+ N ++F+ +K+ +G ++ + T N
Sbjct: 282 ECLFYLAGMREQSVFNFCAIPQSMAIATMELCFRNPDIFKRNIKITKGDACDLMHKSTQN 341
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
++ + F ++ + K DPN K
Sbjct: 342 LSVLCDTFRQYTRKIHKKNTPKDPNFLK 369
>gi|169785549|ref|XP_001827235.1| squalene synthase [Aspergillus oryzae RIB40]
gi|83775983|dbj|BAE66102.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866338|gb|EIT75610.1| squalene synthetase [Aspergillus oryzae 3.042]
Length = 470
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 202/328 (61%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF+ VI++L +L VC+FYLVLR LDT+EDDTSIP K P+L F
Sbjct: 44 CFKFLDLTSRSFSAVIKELHPELLLPVCVFYLVLRGLDTIEDDTSIPLKTKEPMLREFKD 103
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
++ W F E K L+ QFH+V T F + Y++ ++DIT +MG GMA + K
Sbjct: 104 YLEQDGWTFDGNRPEEKDRELLVQFHNVITEFKNMKPAYREIVKDITDKMGNGMADYCRK 163
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V++I++YD YCYYVAGLVG GL++LF + + L+ L SMGLFLQKT
Sbjct: 164 AEFEDASVKTIEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLSRPRLHKSMGLFLQKT 223
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWP+EIWSKYV + EDL EN + A+ C ++MV NAL H E
Sbjct: 224 NIIRDVREDHDDD---RHFWPKEIWSKYVTEFEDLFKPENRETALNCGSEMVLNALEHAE 280
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
+CL Y++ LR+ ++F FCAIPQ MAI TL LC+ N ++F +K+ +G ++ ++ T N
Sbjct: 281 ECLFYLAGLREQSVFNFCAIPQAMAIATLELCFRNPDMFDRNIKITKGEACQLMMESTQN 340
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ + F ++ + K DPN K
Sbjct: 341 LHVLCDTFRRYARRIHKKNTPKDPNFLK 368
>gi|401885881|gb|EJT49962.1| farnesyl-diphosphate farnesyltransferase [Trichosporon asahii var.
asahii CBS 2479]
gi|406697532|gb|EKD00791.1| farnesyl-diphosphate farnesyltransferase [Trichosporon asahii var.
asahii CBS 8904]
Length = 522
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/327 (44%), Positives = 200/327 (61%), Gaps = 18/327 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C++ L + SRSF++VI++L +L VC+FYLVLRALDTVEDD ++ DVK+P+L +FH
Sbjct: 51 CWAFLDQTSRSFSMVIKELDGELAR-VCLFYLVLRALDTVEDDMTVSNDVKLPLLRSFHE 109
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC- 156
+Y+ W F+ ++ K ++ QF + F L + YQ I DITK+MGAGMA +
Sbjct: 110 KLYEPGWTFNGSGEQEKDRQVLVQFDIIQKEFSLLDESYQRVIADITKKMGAGMADYAAL 169
Query: 157 -------KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQ 206
EV SIDDYD YC+YVAGLVG GLS LF SG E LA +LSNSMG LQ
Sbjct: 170 ATPERPVAEVNSIDDYDLYCHYVAGLVGEGLSGLFATSGKEREFLANQLTLSNSMGALLQ 229
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALM 265
KTNI RD ED++E R FWPR IW KY N + +L +A N+MV +AL
Sbjct: 230 KTNIYRDIKEDVDE---GRGFWPRAIWGKYGFNSMNELVDPARRREAQWAANEMVLDALR 286
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H D L Y++ L++ +F F AIP +MA+ TL C+ N +F VK+R+G +++
Sbjct: 287 HATDALDYLTLLKNQTVFNFVAIPAVMAMATLECCFMNPAIFERNVKIRKGQAVQIVMSA 346
Query: 326 NNMTDVYLAFYDFSNILKPKINKNDPN 352
+N DV F D++ + K+ K++PN
Sbjct: 347 SNPRDVAFMFRDYAKAIHAKVPKDEPN 373
>gi|406603314|emb|CCH45106.1| Squalene synthetase [Wickerhamomyces ciferrii]
Length = 437
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/366 (41%), Positives = 213/366 (58%), Gaps = 16/366 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG +A HP + L+LK + Q+ P C+ +L SRSFA VI++L
Sbjct: 1 MGKVAQFALHPLEFRAALQLK--NLHPRDQLNEGPSLKRCWELLKITSRSFAAVIEELHP 58
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG--TKEYKVL 118
+LRN + +FYLVLRALDTVEDD +I +KVP+L +FH + +++ F+ T++ + +
Sbjct: 59 ELRNVIMLFYLVLRALDTVEDDMTIDQAIKVPLLRSFHEKLLTKDFTFNGNAPTEKDRCV 118
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCYYV 172
+ +F + + +L + YQD I+DIT +MG GMA +I K + + DYD YCYYV
Sbjct: 119 LVEFDQILIEYHKLKEEYQDVIKDITLQMGNGMADYIENEEFNAKGLLTKKDYDLYCYYV 178
Query: 173 AGLVGLGLSKLFYAS--GTEDLAPDSLS-NSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++L + G L D MGLFLQKTNIIRDY ED + R FWP
Sbjct: 179 AGLVGDGLTRLIVLAKFGDSKLYKDRQHLIGMGLFLQKTNIIRDYEEDQRD---GRSFWP 235
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIW Y N L +N + + C++++V NAL HV D L+Y+S + D + F FC+IP
Sbjct: 236 KEIWGNYTNDLSSFLDPKNEQQGLYCISELVVNALEHVIDVLQYLSLIEDQSSFNFCSIP 295
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
Q+MAI TL L Y N EVF+ +K+R+G T +I + DV F + + K N
Sbjct: 296 QVMAIATLELVYQNPEVFKRNIKIRKGTTCWLILNSRKFDDVVRIFRSYIRKIHHKSTPN 355
Query: 350 DPNATK 355
DPN K
Sbjct: 356 DPNYLK 361
>gi|296412430|ref|XP_002835927.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629724|emb|CAZ80084.1| unnamed protein product [Tuber melanosporum]
Length = 472
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 231/383 (60%), Gaps = 21/383 (5%)
Query: 7 VLRHPDDLYPLLKLKMASRQA-EKQIPPEP-HWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
+L HP+ L +++ K+ +++I E C+ L SRSF+ VIQ+L +L
Sbjct: 9 LLAHPNQLRAIIQWKVWHNPLHQRKIENESLTLRRCFEFLDLTSRSFSAVIQELCPELCV 68
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDRE-WHF-SCGTKEY-KVLMDQ 121
+V +FYL+LR LDT+EDD +IP ++K P+L +F + V D+E W F G KE K L+ +
Sbjct: 69 SVTLFYLILRGLDTIEDDMTIPLEIKEPLLRSFDK-VLDKEGWTFDGNGPKEKDKQLLVE 127
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCYYVAGL 175
F +V T F L + ++ I+DITK+MG GMA + V +I DYD YC+YVAGL
Sbjct: 128 FSNVITEFALLSESHRAIIKDITKKMGNGMADYANNAEHNVNGVNTIADYDLYCHYVAGL 187
Query: 176 VGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG GL++LF +G + L L NSMGLFLQKTNIIRDY ED+++ R FWP+EI
Sbjct: 188 VGDGLTRLFVDTGKANPALLERPHLINSMGLFLQKTNIIRDYREDLDD---KRRFWPKEI 244
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIM 292
W+K++ K E+L EN + A+ C+++M N+L HV++CL Y++ ++D ++F F AIPQ+M
Sbjct: 245 WTKHIEKYEELHLPENEEAALNCISEMCLNSLQHVDECLFYLAGIKDQSVFNFTAIPQVM 304
Query: 293 AIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDP- 351
AI TLAL + N +VF VK+ +G +++ N+ F + I+ K DP
Sbjct: 305 AIATLALVFRNKDVFHKNVKIPKGEACELMIEAGNLRSTCDIFRKYMKIIHKKNTPKDPN 364
Query: 352 --NATKTLSRVEAIQKACMDSGV 372
N + T+ +VE + + V
Sbjct: 365 FLNISVTIGKVEQFIETIFPTAV 387
>gi|223997364|ref|XP_002288355.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975463|gb|EED93791.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 442
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/367 (43%), Positives = 218/367 (59%), Gaps = 35/367 (9%)
Query: 29 KQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI--P 86
KQ AFC +L KVSRSFA VI+QL L V IFYLVLRALDT+EDD +
Sbjct: 90 KQTFDPSDLAFCDEILCKVSRSFAAVIRQLPPTLLMDVLIFYLVLRALDTIEDDMTFFDS 149
Query: 87 TDVKVPILIAFHR-HVYDREWHF-SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDIT 144
+ KV IL +FH+ + D W CG + + L+++F + + L +G + I DIT
Sbjct: 150 NEDKVKILQSFHKTALVDPNWKMMGCGEGDERRLLEEFPKCHSVYAALPEGSRRVISDIT 209
Query: 145 KRMGAGMAKFICKEVES----IDDYDEYCYYVAGLVGLGLSKLFYASGTE--DLAPD-SL 197
+RM GMA+F+ K++ + Y+ YC++VAGLVG GLS+LF SG E LA + L
Sbjct: 210 QRMATGMAEFVDKDLGQGTVDVQQYNRYCHFVAGLVGEGLSRLFSVSGLEQPSLATELHL 269
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY------EENSDK 251
S+ MGLFLQKTNIIRDYLED + R FWP+ +W KY + DL Y EE ++
Sbjct: 270 SDQMGLFLQKTNIIRDYLEDYVD---GRAFWPQSVWKKYSSS-GDLGYFANPTTEEATNA 325
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVV 311
+ CLN++VT+AL V DCL Y+S LR +FRFCAIPQ+MAI TL C+NN +VF GVV
Sbjct: 326 GLYCLNELVTDALELVPDCLTYLSKLRCAEVFRFCAIPQVMAIATLEKCFNNGDVFTGVV 385
Query: 312 KMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSG 371
K+R+G++ +I+ T ++ V+ F F ATK + + E +K+ +
Sbjct: 386 KIRKGMSCMLINNTTDVLGVHGIFNKF--------------ATKVIRKAETARKSGFEDP 431
Query: 372 VLNKRFK 378
++ K
Sbjct: 432 SYDRTIK 438
>gi|189202916|ref|XP_001937794.1| squalene synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984893|gb|EDU50381.1| squalene synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 484
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 220/377 (58%), Gaps = 19/377 (5%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP +L +++ K+ ++ + + C+ L+K SRSFA VI +L DL V
Sbjct: 13 HPSELRSIIQWKVWHNPVHERNEAKESESLKRCFHFLNKTSRSFAAVILELHPDLLVPVT 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFHHV 125
+FYLVLR LDTVEDD +IP K PIL F + W+F+ G E + L+ +F+ V
Sbjct: 73 LFYLVLRGLDTVEDDMTIPLAKKEPILRNFQDLLEQDGWNFTENGPNEKDRQLLVEFNVV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE-----VESIDDYDEYCYYVAGLVGLGL 180
F ++ YQ+ I+DITKRMG GMA + V++I DY+ YC+YVAGLVG G
Sbjct: 133 IEEFKKIKPAYQEIIKDITKRMGNGMADYANNAEFNAGVDTIKDYELYCHYVAGLVGEGC 192
Query: 181 SKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
++LF +G + L L SMG FLQ+ NI RD ED+++ R FWPREIWSK+V
Sbjct: 193 TRLFVEAGLANAALLKKPELMESMGQFLQQVNITRDIKEDLDD---GRRFWPREIWSKHV 249
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+K EDL EEN KA+ C ++M+ AL +DCL Y++ LR+ ++F FCAIPQ MAI TL
Sbjct: 250 DKFEDLFKEENKQKALNCSSEMILTALTRADDCLYYLAGLREQSVFNFCAIPQTMAIATL 309
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK- 355
C+ N +F+ VK+ +G ++ ++ T N+ V F ++ + K N +DPN K
Sbjct: 310 ETCFQNYALFQKNVKITKGEACQLMVESTQNLQLVCEVFRRYARKIAKKNNPHDPNFLKI 369
Query: 356 --TLSRVEAIQKACMDS 370
TL R+E ++ S
Sbjct: 370 SITLGRIEQFIESIFPS 386
>gi|259485640|tpe|CBF82833.1| TPA: farnesyl-diphosphate farnesyltransferase, putative
(AFU_orthologue; AFUA_7G01220) [Aspergillus nidulans
FGSC A4]
Length = 470
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 215/370 (58%), Gaps = 19/370 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKM---ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
+G++ HP +L +++ K+ + ++ E A C+ L SRSF+ VI++
Sbjct: 3 LGNIIYFAFHPSELRSIIQWKVWHNPVHERNEKNETETQKA-CFKFLDLTSRSFSAVIKE 61
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +L VC+FYL LR LDT+EDDTSIP + K P+L F + W F E K
Sbjct: 62 LHPELLLPVCVFYLALRGLDTIEDDTSIPLETKEPLLRNFKDFLEQDGWTFDGNRPEEKD 121
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYC 169
L+ QFH+V T F + YQ I+DIT +MG GMA + K V+++++YD YC
Sbjct: 122 RELLVQFHNVVTEFRNMKPAYQVIIKDITDKMGNGMADYARKATFEDASVKTVEEYDLYC 181
Query: 170 YYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YYVAGLVG GL++LF + + L L SMGLFLQKTNIIRD ED ++ R
Sbjct: 182 YYVAGLVGEGLTRLFVEAEFGNPALLKRTRLHKSMGLFLQKTNIIRDIREDEDD---GRR 238
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+ IWSK+V+ EDL EN + A+ C ++MV NAL HVEDCL Y++ LR+ ++F FC
Sbjct: 239 FWPKSIWSKHVDNFEDLFKPENREAALNCNSEMVLNALEHVEDCLFYLAGLREQSVFNFC 298
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPK 345
AIPQ MAI TL LC+ N +F +K+ +G +++ + T N+ + F + + K
Sbjct: 299 AIPQAMAIATLELCFRNYTMFERNIKITKGDACQLMTESTQNLRVLCDVFRRYVRRIHKK 358
Query: 346 INKNDPNATK 355
DPN K
Sbjct: 359 NTPKDPNFLK 368
>gi|119178581|ref|XP_001240952.1| hypothetical protein CIMG_08115 [Coccidioides immitis RS]
gi|392867083|gb|EAS29725.2| farnesyl-diphosphate farnesyltransferase [Coccidioides immitis RS]
Length = 472
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 213/364 (58%), Gaps = 25/364 (6%)
Query: 7 VLRHPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD 61
+L HP +L +++ K+ SR + E CY L SRSF+ VI +L +
Sbjct: 10 LLSHPQELRSIIQWKVWHEPVHSRITGNETESEKK---CYHFLKLTSRSFSAVIMELHPE 66
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLM 119
L VC+FYL+LR LDT+EDDTSIP VK P+L F + W F E K L+
Sbjct: 67 LLLPVCLFYLILRGLDTIEDDTSIPLKVKEPLLRNFKDFLEVDGWTFDGNRPEEKDRELL 126
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVE-------SIDDYDEYCYYV 172
QFH+V T F ++ Y+ I+DIT RM GMA + C++ E ++++YD YC+YV
Sbjct: 127 VQFHNVITEFKKIKPAYKAIIKDITDRMSNGMADY-CRKAEFENVNVNTVEEYDLYCWYV 185
Query: 173 AGLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF +G + L L SMGLFLQKTNIIRD ED ++ R FWP
Sbjct: 186 AGLVGEGLTRLFVEAGFARPQLLERPQLFKSMGLFLQKTNIIRDVREDEDD---NRRFWP 242
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWS +V+K EDL EN + AV C +M+ NAL HV+DCL Y++ L++ ++F FCAIP
Sbjct: 243 KEIWSNHVDKWEDLFKPENREAAVNCGAEMILNALGHVDDCLYYLAGLKEQSVFNFCAIP 302
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINK 348
Q MAI TL LC+ N +F +K+ +G +++ T N+ + F ++ + K
Sbjct: 303 QSMAIATLELCFRNPAMFDRNIKITKGQACRLMWQSTQNVRVICDVFRQYARAIHKKNTP 362
Query: 349 NDPN 352
DPN
Sbjct: 363 KDPN 366
>gi|67525837|ref|XP_660980.1| hypothetical protein AN3376.2 [Aspergillus nidulans FGSC A4]
gi|40744164|gb|EAA63344.1| hypothetical protein AN3376.2 [Aspergillus nidulans FGSC A4]
Length = 693
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 215/370 (58%), Gaps = 19/370 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKM---ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
+G++ HP +L +++ K+ + ++ E A C+ L SRSF+ VI++
Sbjct: 3 LGNIIYFAFHPSELRSIIQWKVWHNPVHERNEKNETETQKA-CFKFLDLTSRSFSAVIKE 61
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +L VC+FYL LR LDT+EDDTSIP + K P+L F + W F E K
Sbjct: 62 LHPELLLPVCVFYLALRGLDTIEDDTSIPLETKEPLLRNFKDFLEQDGWTFDGNRPEEKD 121
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYC 169
L+ QFH+V T F + YQ I+DIT +MG GMA + K V+++++YD YC
Sbjct: 122 RELLVQFHNVVTEFRNMKPAYQVIIKDITDKMGNGMADYARKATFEDASVKTVEEYDLYC 181
Query: 170 YYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YYVAGLVG GL++LF + + L L SMGLFLQKTNIIRD ED ++ R
Sbjct: 182 YYVAGLVGEGLTRLFVEAEFGNPALLKRTRLHKSMGLFLQKTNIIRDIREDEDD---GRR 238
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWP+ IWSK+V+ EDL EN + A+ C ++MV NAL HVEDCL Y++ LR+ ++F FC
Sbjct: 239 FWPKSIWSKHVDNFEDLFKPENREAALNCNSEMVLNALEHVEDCLFYLAGLREQSVFNFC 298
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPK 345
AIPQ MAI TL LC+ N +F +K+ +G +++ + T N+ + F + + K
Sbjct: 299 AIPQAMAIATLELCFRNYTMFERNIKITKGDACQLMTESTQNLRVLCDVFRRYVRRIHKK 358
Query: 346 INKNDPNATK 355
DPN K
Sbjct: 359 NTPKDPNFLK 368
>gi|154271921|ref|XP_001536813.1| squalene synthetase [Ajellomyces capsulatus NAm1]
gi|150408800|gb|EDN04256.1| squalene synthetase [Ajellomyces capsulatus NAm1]
Length = 493
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 212/364 (58%), Gaps = 21/364 (5%)
Query: 8 LRHPDDLYPLLKLKM----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP +L +++ K+ + EK + C+ L SRSF+ VI +L +L
Sbjct: 11 LVHPQELRSIIQWKVWHNPVHERDEKNVSETQKK--CFEFLELTSRSFSAVIMELHPELL 68
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQ 121
VC+FYL LR LDT+EDDTSIP K P+L FH + + W F+ E K L+ Q
Sbjct: 69 LPVCLFYLALRGLDTIEDDTSIPLQTKEPLLRGFHNILEEDGWSFNGNRPEEKDRELLVQ 128
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGL 175
FH+V T F + Y+ I+D TK+MG+GMA + K +V+++ +YD YCYYVAG+
Sbjct: 129 FHNVVTEFKLIKPAYRTIIKDTTKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGI 188
Query: 176 VGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG GL++LF +G + L L SMGLFLQKTNIIRD ED + R FWP+EI
Sbjct: 189 VGEGLTRLFVEAGFANPALLERTELFISMGLFLQKTNIIRDVEEDYVD---NRCFWPQEI 245
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIM 292
WSK+V+ EDL EN + A+ C ++M+ NAL H ++CL Y++ LR+ ++F FCAIPQ M
Sbjct: 246 WSKHVDDFEDLFKRENREAALNCNSEMILNALGHADECLFYLAGLREQSVFNFCAIPQSM 305
Query: 293 AIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDP 351
AI TL LC+ N +F +K+ +G +++ T N+ + F + + K DP
Sbjct: 306 AIATLELCFRNEAIFERNIKITKGSACQLMFQSTQNVRAICDVFRQYCRKIHKKNTPKDP 365
Query: 352 NATK 355
N K
Sbjct: 366 NFLK 369
>gi|218199264|gb|EEC81691.1| hypothetical protein OsI_25282 [Oryza sativa Indica Group]
Length = 273
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 154/203 (75%), Gaps = 19/203 (9%)
Query: 174 GLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
GLVG+GLS+LF+A+G EDLAP+SLSNSMGLFLQK NI RDYLEDINEIPK RMFWPREIW
Sbjct: 58 GLVGIGLSRLFHAAGLEDLAPESLSNSMGLFLQKVNITRDYLEDINEIPKSRMFWPREIW 117
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKYV+KLEDLKYE NS KAV+CLN+MVTN L+H EDCL+YMSAL+D I RFCAIPQ
Sbjct: 118 SKYVDKLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCLRYMSALKDITILRFCAIPQHSC 177
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNA 353
TL GLTA++I+ TN+M DVY AFY+FS++L KI+ NDPNA
Sbjct: 178 --TLI-----------------GLTARIINETNSMADVYTAFYEFSSLLAEKIDDNDPNA 218
Query: 354 TKTLSRVEAIQKACMDSGVLNKR 376
+ T RV AI++ C SG+L R
Sbjct: 219 SLTRKRVNAIKETCKSSGLLKIR 241
>gi|225556399|gb|EEH04688.1| squalene synthetase [Ajellomyces capsulatus G186AR]
Length = 493
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 211/364 (57%), Gaps = 21/364 (5%)
Query: 8 LRHPDDLYPLLKLKM----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP +L +++ K+ + EK + C+ L SRSF+ VI +L +L
Sbjct: 11 LVHPQELRSIIQWKVWHNPVHERDEKNVSETQKK--CFEFLELTSRSFSAVIMELHPELL 68
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQ 121
VC+FYL LR LDT+EDDTSIP K P+L FH + W F+ E K L+ Q
Sbjct: 69 LPVCLFYLALRGLDTIEDDTSIPLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQ 128
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGL 175
FH+V T F + Y+ I+D TK+MG+GMA + K +V+++ +YD YCYYVAG+
Sbjct: 129 FHNVVTEFKLIKPAYRTIIKDTTKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGI 188
Query: 176 VGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG GL++LF +G + L L SMGLFLQKTNIIRD ED + R FWP+EI
Sbjct: 189 VGEGLTRLFVEAGFANPALLERTELFISMGLFLQKTNIIRDVKEDYVD---NRCFWPQEI 245
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIM 292
WSK+V+ EDL EN + A+ C ++M+ NAL H ++CL Y++ LR+ ++F FCAIPQ M
Sbjct: 246 WSKHVDDFEDLFKRENREAALNCNSEMILNALGHADECLFYLAGLREQSVFNFCAIPQSM 305
Query: 293 AIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDP 351
AI TL LC+ N +F +K+ +G +++ T N+ + F + + K DP
Sbjct: 306 AIATLELCFRNEAIFERNIKITKGSACQLMFQSTQNVRAICDVFRQYGRKIHKKNTPKDP 365
Query: 352 NATK 355
N K
Sbjct: 366 NFLK 369
>gi|325095343|gb|EGC48653.1| squalene synthetase [Ajellomyces capsulatus H88]
Length = 472
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 211/364 (57%), Gaps = 21/364 (5%)
Query: 8 LRHPDDLYPLLKLKM----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP +L +++ K+ + EK + C+ L SRSF+ VI +L +L
Sbjct: 11 LVHPQELRSIIQWKVWHNPVHERDEKNVSETQKK--CFEFLELTSRSFSAVIMELHPELL 68
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQ 121
VC+FYL LR LDT+EDDTSIP K P+L FH + W F+ E K L+ Q
Sbjct: 69 LPVCLFYLALRGLDTIEDDTSIPLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQ 128
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGL 175
FH+V T F + Y+ I+D TK+MG+GMA + K +V+++ +YD YCYYVAG+
Sbjct: 129 FHNVVTEFKLIKPAYRTIIKDTTKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGI 188
Query: 176 VGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG GL++LF +G + L L SMGLFLQKTNIIRD ED + R FWP+EI
Sbjct: 189 VGEGLTRLFVEAGFANPALLERTELFISMGLFLQKTNIIRDVKEDYVD---NRCFWPQEI 245
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIM 292
WSK+V+ EDL EN + A+ C ++M+ NAL H ++CL Y++ LR+ ++F FCAIPQ M
Sbjct: 246 WSKHVDDFEDLFKRENREAALNCNSEMILNALGHADECLFYLAGLREQSVFNFCAIPQSM 305
Query: 293 AIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDP 351
AI TL LC+ N +F +K+ +G +++ T N+ + F + + K DP
Sbjct: 306 AIATLELCFRNEAIFERNIKITKGSACQLMFQSTQNVRAICDVFRQYGRKIHKKNTPKDP 365
Query: 352 NATK 355
N K
Sbjct: 366 NFLK 369
>gi|378725575|gb|EHY52034.1| farnesyl-diphosphate farnesyltransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 486
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/328 (43%), Positives = 199/328 (60%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L K SRSF+ VI++L DL VC+FYLVLR LDT+EDDTSI ++K P+L FH
Sbjct: 45 CFYYLDKTSRSFSAVIKELHPDLLLPVCLFYLVLRGLDTIEDDTSISLEIKEPLLRKFHE 104
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
++ WHF E K L+ F +V + ++ Y+ I+DIT +MG GMA +
Sbjct: 105 NLEVDGWHFDGNRPEEKDRELLVNFRYVVEEYKKMKPEYKAIIKDITVKMGNGMADYCLN 164
Query: 158 E------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V +I DYD YCYYVAGLVG GL+++F + L +L SMGLFLQK
Sbjct: 165 AEFNEVGVTTIADYDLYCYYVAGLVGEGLTRMFVEGKFGNPALLDRPNLHRSMGLFLQKV 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWPREIWS+YV++ EDL EN +KA+ C + M+ NAL H +
Sbjct: 225 NIIRDVREDFDD---NRKFWPREIWSQYVDEFEDLFRPENREKALNCSSHMILNALEHAD 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
+CL Y++ LR+ ++F FCAIPQ MAI TL LC+ N +F+ +K+ +G ++ I+ T N
Sbjct: 282 ECLFYLAGLREQSVFNFCAIPQSMAIATLDLCFRNYAMFQRNIKITKGEACQLMIESTQN 341
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ V F + ++ K DPN K
Sbjct: 342 LQVVAEVFRKHLHSIRNKNRPEDPNFLK 369
>gi|50306959|ref|XP_453457.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642591|emb|CAH00553.1| KLLA0D08866p [Kluyveromyces lactis]
Length = 441
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 222/380 (58%), Gaps = 19/380 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG +A +L HP +L LKLK + + I C+ +L SRSFA VI +L
Sbjct: 1 MGKVAELLSHPLELKAALKLKFLRKPLFPDVVIEESADLTRCHELLKLTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF---SCGTKEY 115
+LRNAV +FYLVLRALDTVEDD +I +K+P+L F + W+F K+
Sbjct: 61 HPELRNAVMLFYLVLRALDTVEDDMTIDPKIKIPVLREFDSKLDLPSWYFDGNGPNEKDR 120
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
VL+D F + +L YQ I++IT +MG GMA +I E ++++ DYD YC
Sbjct: 121 AVLVD-FPCILNELHKLKPEYQRVIKEITGKMGNGMADYILDENFNLNGLQTVADYDLYC 179
Query: 170 YYVAGLVGLGLSKLFYASG--TEDLAPDS--LSNSMGLFLQKTNIIRDYLEDINEIPKCR 225
+YVAGLVG GL+++ +G + DL ++ L MGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTQMLVLAGFGSNDLYDENVHLYEDMGLFLQKTNIIRDYAEDLAD---GR 236
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRF 285
FWP+EIWS Y KL D EN+ + + C+N +V NA+ H+E L Y++++ + + F+F
Sbjct: 237 SFWPKEIWSLYAEKLSDFAKPENTQQGLYCINHLVLNAMTHIESVLHYLASIHEQSSFQF 296
Query: 286 CAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPK 345
CAIPQ+MAI TL+L + N +V VK+R+G T +I ++ + F + +K +
Sbjct: 297 CAIPQVMAIATLSLVFANPKVMHENVKIRKGTTCYLILKSRTLRGCVEIFQYYLRDIKKR 356
Query: 346 INKNDPNATKTLSRVEAIQK 365
+ DP+ K ++ I++
Sbjct: 357 LTVEDPSYLKLNIQISKIEQ 376
>gi|367004491|ref|XP_003686978.1| hypothetical protein TPHA_0I00370 [Tetrapisispora phaffii CBS 4417]
gi|357525281|emb|CCE64544.1| hypothetical protein TPHA_0I00370 [Tetrapisispora phaffii CBS 4417]
Length = 441
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 218/382 (57%), Gaps = 24/382 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQA--EKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
MG L +L HP +L L LK RQ + CY +L K SRSFA VI +L
Sbjct: 1 MGKLGELLAHPVELKSALILKFI-RQPLYSNEASMSADVKKCYELLTKTSRSFAAVIMEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG---TKEY 115
+LRNAV IFYL+LRALDT+EDD +I D KV +L F + +W F+ K+
Sbjct: 60 HPELRNAVAIFYLILRALDTIEDDMTIDVDEKVRLLEEFDGKLDTLDWSFNGNGPNEKDR 119
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM------AKFICKEVESIDDYDEYC 169
VL+ +F ++ + L YQ I+ ITK M GM A+F V ++ DYD YC
Sbjct: 120 DVLV-EFPYILREYHNLKPEYQQVIKKITKEMAKGMVKYVLDAEFTLNGVATVQDYDMYC 178
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL----APDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
+YVAGLVG GL++L + G+ L L SMGLFLQKTNIIRDY ED+ +
Sbjct: 179 HYVAGLVGDGLTELIVLANFGSPSLYESDGNSKLFESMGLFLQKTNIIRDYAEDLRD--- 235
Query: 224 CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283
R FWP+EIW+++ +KL L ++D V C+N +V NAL HVED L Y+S + + + F
Sbjct: 236 GRTFWPKEIWAQHTDKLASLA--TDADNGVACINHLVLNALSHVEDVLTYLSLIEEQSSF 293
Query: 284 RFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILK 343
+FCAIPQ+MAI TL+L +NN V + VK+R+G T +I ++ + F + +K
Sbjct: 294 QFCAIPQVMAIATLSLVFNNATVLQKNVKIRKGETCYLILKSRTLKGCVEIFTYYLRQIK 353
Query: 344 PKINKNDPNATKTLSRVEAIQK 365
+ NDPN K ++ I++
Sbjct: 354 QSLQVNDPNYLKINIQIARIEQ 375
>gi|219120402|ref|XP_002180940.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407656|gb|EEC47592.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 314
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/317 (46%), Positives = 203/317 (64%), Gaps = 22/317 (6%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI--PTDVKVPILI 95
AFC +L VSRSFA VI+QL L + +FYLVLRALDT+EDDT+ + K+ L+
Sbjct: 2 AFCDDILVHVSRSFAAVIRQLPDRLLVDILVFYLVLRALDTIEDDTTAFASPEEKIDYLL 61
Query: 96 AFHR-HVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
FHR + D +W+ G + + L+ QF + +L + + D+T RM GMA+
Sbjct: 62 NFHRTALADPDWNLQHVGQGDERRLLQQFPQCHRVYAKLAAPSRRVVADVTARMATGMAE 121
Query: 154 FICKEV----ESIDDYDEYCYYVAGLVGLGLSKLFYASGTE--DLAPD-SLSNSMGLFLQ 206
F+ K++ + + Y+ YC++VAGLVG GLS+LF ASG E A + LS+ MGLFLQ
Sbjct: 122 FVRKDLGQGTTNTEQYNRYCHFVAGLVGEGLSRLFAASGLEAGSFAGELHLSDQMGLFLQ 181
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY-------EENSDKAVQCLNDM 259
KTNIIRDYLED + R FWP+ +W KY +DL Y ++ D+A+ CLN++
Sbjct: 182 KTNIIRDYLEDYVDQ---RAFWPQSVWKKYAAT-DDLGYFAQSIGTDDGRDRALGCLNEL 237
Query: 260 VTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTA 319
VT+AL V DCL Y++ L+ IFRFCAIPQ+MAI TL CY+N+ VF GVVK+R+GL+
Sbjct: 238 VTDALELVPDCLTYLARLQCQEIFRFCAIPQVMAIATLDKCYHNVNVFTGVVKIRKGLSC 297
Query: 320 KVIDRTNNMTDVYLAFY 336
K++ RTN ++ V+ FY
Sbjct: 298 KLLLRTNTLSQVHETFY 314
>gi|115402367|ref|XP_001217260.1| squalene synthetase [Aspergillus terreus NIH2624]
gi|114189106|gb|EAU30806.1| squalene synthetase [Aspergillus terreus NIH2624]
Length = 476
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 199/328 (60%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L + SRSF+ VI++L +L VC+FYL LR LDT+EDDTSIP + K P+L F
Sbjct: 50 CFKFLDQTSRSFSAVIKELHPELLLPVCVFYLTLRGLDTIEDDTSIPLETKEPLLRGFKD 109
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W F+ E K L+ QFH+V T + + Y+ ++DIT +MG GMA + K
Sbjct: 110 IMEQDGWTFNGNRPEEKDRELLVQFHNVITEYKNMKPAYRAIVKDITDKMGNGMADYCHK 169
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V++ +YD YCYYVAGLVG GL++LF + + L L SMGLFLQKT
Sbjct: 170 AATEDASVKTTVEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLKRPQLHKSMGLFLQKT 229
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWPREIWSK+V+ DL E+ + A+ C ++MV NAL HVE
Sbjct: 230 NIIRDVREDNDD---NRRFWPREIWSKHVSDFNDLFKPEHREAALNCSSEMVLNALEHVE 286
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNN 327
DCL Y++ LR+ +IF FCAIPQ MAI TL LC+ N +F+ +K+ +G +++ + T N
Sbjct: 287 DCLFYLAGLREQSIFNFCAIPQSMAIATLELCFRNPAIFQRNIKITKGDACQLMTESTQN 346
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ + F ++ + K DPN K
Sbjct: 347 LRVLCDTFRRYARRIHQKNTPKDPNFLK 374
>gi|330929033|ref|XP_003302494.1| hypothetical protein PTT_14326 [Pyrenophora teres f. teres 0-1]
gi|311322124|gb|EFQ89410.1| hypothetical protein PTT_14326 [Pyrenophora teres f. teres 0-1]
Length = 484
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 219/377 (58%), Gaps = 19/377 (5%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP +L +++ K+ ++ + + C+ L+K SRSFA VI +L DL V
Sbjct: 13 HPSELRSIIQWKVWHNPVHERNEAKESESLKRCFHFLNKTSRSFAAVILELHPDLLVPVT 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFHHV 125
+FYL+LR LDTVEDD +IP K PIL F + W+F+ G E + L+ +F+ V
Sbjct: 73 LFYLILRGLDTVEDDMTIPLAKKEPILRNFQDLLEQDGWNFTENGPNEKDRQLLVEFNVV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE-----VESIDDYDEYCYYVAGLVGLGL 180
F ++ YQD I+DITKRMG GMA + V +I DY+ YC+YVAGLVG G
Sbjct: 133 IEEFKKIKPAYQDIIKDITKRMGNGMADYANNAEFNAGVNTIKDYELYCHYVAGLVGEGC 192
Query: 181 SKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
++LF +G + L L SMG FLQ+ NI RD ED+++ R FWPREIWSK+V
Sbjct: 193 TRLFVEAGLANAALLKRPELMESMGQFLQQVNITRDIKEDLDD---GRRFWPREIWSKHV 249
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+K EDL EEN KA+ C ++M+ AL +DCL Y++ LR+ ++F FCAIPQ MAI TL
Sbjct: 250 DKFEDLFKEENKQKALNCSSEMILTALTRADDCLYYLAGLREQSVFNFCAIPQTMAIATL 309
Query: 298 ALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK- 355
C+ N +F+ VK+ +G ++ ++ T N+ V F ++ + + N +DP+ K
Sbjct: 310 ETCFQNYALFQKNVKITKGEACQLMVESTQNLQLVCEVFRRYARKIAKRNNPHDPSFLKI 369
Query: 356 --TLSRVEAIQKACMDS 370
TL ++E ++ S
Sbjct: 370 SITLGKIEQFIESIFPS 386
>gi|240276613|gb|EER40124.1| squalene synthetase [Ajellomyces capsulatus H143]
Length = 457
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 207/361 (57%), Gaps = 30/361 (8%)
Query: 8 LRHPDDLYPLLKLKM----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLR 63
L HP +L +++ KM + EK + C+ L SRSF+ VI +L +L
Sbjct: 11 LVHPQELRSIIQWKMWHNPVHERDEKNVSETQKK--CFEFLELTSRSFSAVIMELHPELL 68
Query: 64 NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQ 121
VC+FYL LR LDT+EDDTSIP K P+L FH + W F+ E K L+ Q
Sbjct: 69 LPVCLFYLALRGLDTIEDDTSIPLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQ 128
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGL 175
FH+V T F + Y+ I+D TK+MG+GMA + K +V+++ +YD YCYYVAG+
Sbjct: 129 FHNVVTEFKLIKPAYRTIIKDTTKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGI 188
Query: 176 VGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
VG GL++LF L SMGLFLQKTNIIRD ED + R FWP+EIWSK
Sbjct: 189 VGEGLTRLF------------LFISMGLFLQKTNIIRDVKEDYVD---NRCFWPQEIWSK 233
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
+V+ EDL EN + A+ C ++M+ NAL H ++CL Y++ LR+ ++F FCAIPQ MAI
Sbjct: 234 HVDDFEDLFKRENREAALNCNSEMILNALGHADECLFYLAGLREQSVFNFCAIPQSMAIA 293
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPNAT 354
TL LC+ N +F +K+ +G +++ T N+ + F + + K DPN
Sbjct: 294 TLELCFRNEAIFERNIKITKGSACQLMFQSTQNVRAICDVFRQYGRKIHKKNTPKDPNFL 353
Query: 355 K 355
K
Sbjct: 354 K 354
>gi|212526208|ref|XP_002143261.1| farnesyl-diphosphate farnesyltransferase, putative [Talaromyces
marneffei ATCC 18224]
gi|210072659|gb|EEA26746.1| farnesyl-diphosphate farnesyltransferase, putative [Talaromyces
marneffei ATCC 18224]
Length = 471
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 217/371 (58%), Gaps = 19/371 (5%)
Query: 10 HPDDLYPLLKLKM---ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
HP +L +++ K+ + + PE C+ L SRSFA VI +L +L AV
Sbjct: 13 HPSELRSIIQWKVWHNPPHERDDSKDPETR-KKCFKFLKLTSRSFAAVIMELHPELLVAV 71
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHH 124
+FYLVLR LDT+EDDTS+P DVK P+L F + W ++ E K L+ +F +
Sbjct: 72 TVFYLVLRGLDTIEDDTSVPLDVKEPLLRDFKNIIEKDGWTWNGNRPEEKDRQLLVEFDN 131
Query: 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGLVGL 178
V T + L Y+ I+D+T +MG GMA F+ K ++I +YD YCYYVAGLVG
Sbjct: 132 VITEYKALKPAYRKIIKDMTDKMGNGMADFVQKAETEGISTQTIGEYDLYCYYVAGLVGD 191
Query: 179 GLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
GL++LF + + L+ +L SMGLFLQKTNIIRD ED ++ R FWP+EIWSK
Sbjct: 192 GLTQLFVEAQFGNPALLSRPNLHKSMGLFLQKTNIIRDIREDHDD---NRHFWPKEIWSK 248
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
+V K EDL + + A+ C ++MV NAL HV++CL Y++ LR+ ++F FCAIPQ MAI
Sbjct: 249 HVEKFEDLFDPKYKEAALNCSSEMVLNALEHVDECLFYLAGLREQSVFNFCAIPQAMAIA 308
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNAT 354
TL LC+ N +F +K+ +G ++ ++ T N+ + F ++ + K DPN
Sbjct: 309 TLELCFRNYSMFERNIKITKGDACRLMLESTQNLQVLCETFRTYARKIHQKNTPKDPNFV 368
Query: 355 KTLSRVEAIQK 365
K +I+K
Sbjct: 369 KISIACGSIEK 379
>gi|407922446|gb|EKG15545.1| Squalene/phytoene synthase [Macrophomina phaseolina MS6]
Length = 481
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 193/330 (58%), Gaps = 15/330 (4%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P C+ L K SRSFA VIQ+L +L VC+FYL+LR LDT+EDD +I K P+L
Sbjct: 40 PSLRQCFVFLEKTSRSFAAVIQELHPELLVPVCLFYLILRGLDTIEDDMTIDLKTKEPLL 99
Query: 95 IAFHRHVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
F + + W+F K L+ QF V F ++ K YQ I+DITK+MG GMA
Sbjct: 100 RDFDKILDKEGWNFDGNGPNEKDRQLLVQFEVVIEEFKKIKKPYQTIIKDITKKMGNGMA 159
Query: 153 KFICKE------VESIDDYDEYCYYVAGLVGLGLSKLFYAS---GTEDLAPDSLSNSMGL 203
+ V ++ DY+ YC+YVAGLVG GL++LF + T L L SMG
Sbjct: 160 DYANNAEHNTYGVNTVKDYELYCHYVAGLVGEGLTRLFVEADLANTALLKRSELHESMGQ 219
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
FLQ+ NIIRD ED+++ R FWPREIWSK+V K EDL EN +KA+ C ++M+ A
Sbjct: 220 FLQQVNIIRDIKEDLDD---GRKFWPREIWSKHVEKFEDLFKPENREKALNCNSEMILTA 276
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLT-AKVI 322
L DCL Y++ LRD ++F FCAIPQ MAI TL +C+ N +F VK+ +G A +I
Sbjct: 277 LRRAPDCLFYLAGLRDQSVFNFCAIPQTMAIATLEICFRNPAIFEKNVKITKGQACALMI 336
Query: 323 DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
T N+ V F +FS + K + DPN
Sbjct: 337 RSTQNLQIVCEVFKEFSRKILKKNDPRDPN 366
>gi|388579131|gb|EIM19459.1| farnesyl-diphosphate farnesyltransferase [Wallemia sebi CBS 633.66]
Length = 489
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 158/378 (41%), Positives = 211/378 (55%), Gaps = 27/378 (7%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF---------CYSMLHKVSRSFALVIQQL 58
L HP + LL+ K+ PE H C+ L K SRSFA VI++L
Sbjct: 11 LTHPLEFRTLLQYKIWYEPKRDITSPEEHATTGFDRESMRTCWDFLDKTSRSFAPVIKEL 70
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKV- 117
+ L +CIFYLVLR LDTVEDD +IP DVK PIL +FH+ +Y+ W+F+ E K
Sbjct: 71 DSVLARVICIFYLVLRGLDTVEDDMTIPLDVKEPILRSFHQKLYEPGWNFTESGPEEKDR 130
Query: 118 -LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
L+ +FH V FL L + I DITK+MG GMA + VE I D+D YC+
Sbjct: 131 HLLVKFHAVIDEFLLLDDECKKVIADITKKMGNGMADYCAAAERGQSGVEDIKDFDLYCH 190
Query: 171 YVAGLVGLGLSKLFYASGTED-LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
+VAGLVG GLS LF A+ E D L SNSMGLFLQKTNI+RDY ED++ R F
Sbjct: 191 FVAGLVGEGLSGLFAATKLEKPFIADQLELSNSMGLFLQKTNILRDYREDVD---LGREF 247
Query: 228 WPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
WP + + N DLK N +KA+ ++ MV +AL H D L Y++ L++ ++F F
Sbjct: 248 WPMSLVKQQGFNSRADLKEPGNEEKALWVISSMVLDALRHAPDVLDYLALLKNQSVFNFA 307
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKI 346
AIPQ+ AI TL C+ N ++ VK+R+ K++ N DV F +S + K+
Sbjct: 308 AIPQVHAIATLEACFMNPDILHKNVKIRKAAAVKILMTIRNPRDVAEKFVFYSRKIHEKL 367
Query: 347 NKNDPNATK---TLSRVE 361
+ DPN K LSR+E
Sbjct: 368 SPADPNFIKLSVALSRIE 385
>gi|322693079|gb|EFY84953.1| squalene synthase [Metarhizium acridum CQMa 102]
Length = 458
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/375 (40%), Positives = 224/375 (59%), Gaps = 21/375 (5%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L +L HP+ L +++ + S ++E C+ L+ SRSFA VIQ+L
Sbjct: 1 MGALYYLL-HPNQLRSIIQWRDPSTESET-------LKECFRFLNLTSRSFAAVIQELNH 52
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+L + +FYLVLR LDT+EDD +IP KVP+L FH + W + ++ K L++
Sbjct: 53 ELLVPISLFYLVLRGLDTIEDDMTIPLSKKVPLLRNFHNTMEIDGWQYHESQEKDKELLE 112
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYVAG 174
+F V T ++ Y I+DIT +MG GMA + I V +IDDY+ YC+YVAG
Sbjct: 113 KFDVVITELKKIKPTYYAIIKDITIKMGHGMADYAQNDEMIKNGVNTIDDYELYCHYVAG 172
Query: 175 LVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG GL+KLF AS G LA SL+ SMG FLQKTNIIRD ED ++ R ++P+E
Sbjct: 173 LVGEGLTKLFVASELGNPKLAERPSLTESMGQFLQKTNIIRDLREDWSD---GRRWYPKE 229
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWS++V+K EDL ++ DKA+ C++DMV +AL H E+CL YM+ +R+ ++F F AIPQ
Sbjct: 230 IWSRHVDKWEDLFDPKHEDKALNCISDMVLDALKHCEECLFYMAGMREQSVFNFVAIPQG 289
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNNMTDVYLAFYDFSNILKPKINKND 350
MAI TL L + N +V + VK+ +G +++ T N+ V F ++ ++ K + D
Sbjct: 290 MAIATLELVFRNPDVLKRNVKITKGDACQLMTECTQNLYTVCEVFRRYARRIQKKNDPRD 349
Query: 351 PNATKTLSRVEAIQK 365
PN R I++
Sbjct: 350 PNYLNISVRCAKIEQ 364
>gi|156622393|emb|CAO98816.1| squalene synthase [Nakaseomyces delphensis]
Length = 443
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 216/381 (56%), Gaps = 19/381 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQ--AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
M +L HP +L LKLK + CY +L SRSFA VI +L
Sbjct: 1 MSKALELLVHPLELKAALKLKFIRQPLFTTNDTTATAGLIRCYELLTLTSRSFAAVIMEL 60
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG--TKEYK 116
+LRN + +FYLVLRALDTVEDD +I +KV L F + +W F ++ +
Sbjct: 61 HPELRNVIMVFYLVLRALDTVEDDMTIQPQLKVKTLREFDSKLDTDDWSFDGNDLKEKDR 120
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
V++ +F + + +L YQ I+ IT MG GMA +I + V++I DYD YC+
Sbjct: 121 VVLTEFPVILAEYHKLKPEYQRVIKRITGLMGNGMADYILDDNFNLNGVQTIKDYDIYCH 180
Query: 171 YVAGLVGLGLSKLFYASG--TEDLAPD----SLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YVAGLVG GL++L +G ++DL L SMGLFLQKTNIIRDY ED+N+
Sbjct: 181 YVAGLVGDGLTELIVLAGFGSDDLYNGKNSFQLYESMGLFLQKTNIIRDYAEDLND---G 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWP+E+WS Y +KL D K +N+ V C+N +V NAL HV D L ++S++ + + F+
Sbjct: 238 RSFWPKEVWSLYADKLTDFKDPKNTQNGVNCINHLVLNALTHVIDVLTFLSSVHEQSTFQ 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKP 344
FCAIPQ+MA+ TLA +NN +V + VK+R+G T +I + + F + +K
Sbjct: 298 FCAIPQVMAVATLAKVFNNPDVLKKNVKIRKGTTCYLILNSRTLKGTIEIFQYYLRDMKQ 357
Query: 345 KINKNDPNATKTLSRVEAIQK 365
++ DPN K +V I++
Sbjct: 358 RLPVQDPNYLKFNIQVARIEQ 378
>gi|213406287|ref|XP_002173915.1| squalene synthetase [Schizosaccharomyces japonicus yFS275]
gi|212001962|gb|EEB07622.1| squalene synthetase [Schizosaccharomyces japonicus yFS275]
Length = 467
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 205/340 (60%), Gaps = 16/340 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L SRSFA VI +L +LR AV IFYLVLR LDT+EDD +I + K P+L+ F++
Sbjct: 38 CYEFLKLTSRSFAAVIMELTPELRIAVMIFYLVLRGLDTIEDDMTISLEKKKPLLLDFYK 97
Query: 100 HVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF--I 155
+ W+F S ++ + L+ +F V + L +GY+D I I K MG+GMAK+ +
Sbjct: 98 FIEQPGWNFKESGPNEKDRQLLVEFEVVIAEYHNLKQGYRDVISSIAKEMGSGMAKYATL 157
Query: 156 CKE-----VESIDDYDEYCYYVAGLVGLGLSKLFYASG--TEDLAPD-SLSNSMGLFLQK 207
+E VES++D+D YC+YVAGLVG GLS+LF S T+DLA +LSNS+GLFLQK
Sbjct: 158 AEEHDGYSVESLEDFDMYCHYVAGLVGEGLSRLFANSDLETKDLAKQPALSNSVGLFLQK 217
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
TNIIRDY ED + R FWPR IWSKY + E + KA+ CL+++V NAL H
Sbjct: 218 TNIIRDYREDFEDK---RQFWPRAIWSKYTDDFGSF-CEPGNVKALYCLSEIVANALEHA 273
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
++Y+ L++ +F F AIPQ MAI TLA + N E F+ VK+R+G +I N
Sbjct: 274 PSAIEYLCQLQNQQVFNFVAIPQCMAIATLAAVFKNPETFQTNVKIRKGQAVTIIMYAMN 333
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
+ V F ++ + K +DPN + +++AC
Sbjct: 334 IKAVCDIFLRYTREIHAKNTPDDPNFLRISIACGKVEQAC 373
>gi|409040576|gb|EKM50063.1| hypothetical protein PHACADRAFT_264568 [Phanerochaete carnosa
HHB-10118-sp]
Length = 498
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 222/403 (55%), Gaps = 36/403 (8%)
Query: 1 MGSLA---AVLRHPDDLYPLLKLKMASRQAEKQIPPE---PHW-----AFCYSMLHKVSR 49
MG+L+ ++ HP + LL+ + Q + +P + W C+ L SR
Sbjct: 1 MGALSWLVLLVTHPLEFRILLQYWLWHDQRDVSLPGDHANTGWNRESMKKCWGFLDVTSR 60
Query: 50 SFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS 109
SFA VI+QL +L VC++YLVLR LDT+EDD S+P + K P+L FH + W F+
Sbjct: 61 SFAAVIKQLEGELARVVCLYYLVLRGLDTIEDDMSLPDEKKQPLLRNFHNYTLTSGWTFT 120
Query: 110 -CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VE 160
G E + L+ ++ +V L Y D I +ITK+M AGMA + K +E
Sbjct: 121 ESGPDEPDRQLLVEYGNVVEELRMLKPDYLDVIVEITKKMEAGMADYAHKAQTTGEVYLE 180
Query: 161 SIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLED 217
I++YD YC+YVAGLVG GLS LF ASG E LSNSMGLFLQKTNIIRDY ED
Sbjct: 181 KIEEYDLYCHYVAGLVGEGLSGLFAASGREGSFMAGQLELSNSMGLFLQKTNIIRDYRED 240
Query: 218 INEIPKCRMFWPREIWS--KY--------VNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
+N+ R FWPREIW KY +++++ N +A + MV NAL H
Sbjct: 241 VNQK---RYFWPREIWGNEKYGAAVGKPAFKEMKEMYMPGNEKQAEYVQSAMVLNALCHA 297
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
D L Y+ L++ ++F FCAIPQ MAI TL LC+ N +F+ +K+R+ A +I R+ N
Sbjct: 298 ADSLDYLRLLKNQSVFNFCAIPQTMAIATLHLCFKNPTMFQRNIKIRKAEAAHLIMRSKN 357
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDS 370
DV F +++ + K +DP+ K + I+K C D
Sbjct: 358 PRDVAYIFREYAQRIHAKCTPDDPSFIKIAAACGRIEKWCEDQ 400
>gi|226289452|gb|EEH44958.1| squalene synthetase [Paracoccidioides brasiliensis Pb18]
Length = 472
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 214/365 (58%), Gaps = 23/365 (6%)
Query: 8 LRHPDDLYPLLKLK-----MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDL 62
L HP +L +++ K + R + + E C+ L SRSF+ VI +L +L
Sbjct: 11 LFHPQELRSIIQWKVWHNPIYERDEKLETQTE---KICFHFLKLTSRSFSAVILELHPEL 67
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMD 120
VC+FYL+LR LDT+EDDTSIP K P+L FH + + W F+ E K L+
Sbjct: 68 LLPVCLFYLILRGLDTIEDDTSIPLRTKEPLLRNFHNFLDEDGWSFNGNRPEEKDRELLV 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAG 174
QFH+V + F ++ Y+ I+DI KRMG GMA + K +V++I++YD YCYYVAG
Sbjct: 128 QFHNVISEFKKINLAYRTIIKDIAKRMGNGMADYCRKAELETAKVKTIEEYDLYCYYVAG 187
Query: 175 LVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG GL++LF +G + L L SMGLFLQKTNIIRD ED + K R FWP+E
Sbjct: 188 LVGEGLTRLFVEAGFANPALLNRPELYISMGLFLQKTNIIRDVKED--HVDK-RCFWPKE 244
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWSK+VN+ EDL EN A+ C +M+ NAL H + CL Y++ L++ +IF FCAIPQ
Sbjct: 245 IWSKHVNEFEDLFKPENRAAALNCNAEMILNALDHADKCLFYLAGLKEQSIFNFCAIPQS 304
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 350
MAI TL LC+ N +F VK+ +G+ ++ + T ++ + F + + K D
Sbjct: 305 MAIATLELCFRNETIFERNVKITKGIACQLMVQSTQSVRVICDVFKLYIRKIHKKNTPKD 364
Query: 351 PNATK 355
PN K
Sbjct: 365 PNFLK 369
>gi|225681326|gb|EEH19610.1| squalene synthetase [Paracoccidioides brasiliensis Pb03]
Length = 472
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 214/365 (58%), Gaps = 23/365 (6%)
Query: 8 LRHPDDLYPLLKLK-----MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDL 62
L HP +L +++ K + R + + E C+ L SRSF+ VI +L +L
Sbjct: 11 LFHPQELRSIIQWKVWHNPIYERDEKLETQTE---KICFHFLKLTSRSFSAVILELHPEL 67
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMD 120
VC+FYL+LR LDT+EDDTSIP K P+L FH + + W F+ E K L+
Sbjct: 68 LLPVCLFYLILRGLDTIEDDTSIPLRTKEPLLRNFHNFLDEDGWSFNGNRPEEKDRELLV 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAG 174
QFH+V + F ++ Y+ I+DI KRMG GMA + K +V++I++YD YCYYVAG
Sbjct: 128 QFHNVISEFKKINLAYRTIIKDIAKRMGNGMADYCRKAELETAKVKTIEEYDLYCYYVAG 187
Query: 175 LVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG GL++LF +G + L L SMGLFLQKTNIIRD ED + K R FWP+E
Sbjct: 188 LVGEGLTRLFVEAGFANPALLNRPELYISMGLFLQKTNIIRDVKED--HVDK-RCFWPKE 244
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWSK+VN+ EDL EN A+ C +M+ NAL H + CL Y++ L++ +IF FCAIPQ
Sbjct: 245 IWSKHVNEFEDLFKPENRAAALNCNAEMILNALDHADKCLFYLAGLKEQSIFNFCAIPQS 304
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 350
MAI TL LC+ N +F VK+ +G+ ++ + T ++ + F + + K D
Sbjct: 305 MAIATLELCFRNETIFERNVKITKGIACQLMVQSTQSVRVICDVFKLYIRKIHKKNTPKD 364
Query: 351 PNATK 355
PN K
Sbjct: 365 PNFLK 369
>gi|345571251|gb|EGX54065.1| hypothetical protein AOL_s00004g98 [Arthrobotrys oligospora ATCC
24927]
Length = 488
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 206/337 (61%), Gaps = 14/337 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L SRSFA VI +L ++R V +FYLVLR LDTVEDD +I D+K+P+L FH+
Sbjct: 45 CYEFLEMTSRSFAAVILELQPEMRVPVALFYLVLRGLDTVEDDMTIHNDIKIPLLQNFHK 104
Query: 100 HVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W F + T++ + L+ +F V T F +L Y++ I DI K+MG GMA+
Sbjct: 105 ILDQPGWTFDGNAPTEKDRQLLVEFDVVITEFAKLKDVYKEVIRDIAKQMGEGMAETCRG 164
Query: 158 EVESID------DYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
+++D DYD YC+YVAGLVG GL++LF +G + L L SMGLFLQK
Sbjct: 165 PAKNLDGLPLIKDYDRYCFYVAGLVGEGLTRLFVPAGFANPGLLTRRRLYISMGLFLQKV 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD+ ED+ + R F+P+EIW KYV+K DL EN +KA+ C +++V NAL H +
Sbjct: 225 NIIRDFYEDLED---SRSFYPKEIWGKYVDKYTDLGLPENEEKALACQSELVLNALDHAD 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNM 328
DCL Y++ LRD +++ FCAIPQ+MAI TLAL + N ++F+ +K+ +G +++ N+
Sbjct: 282 DCLYYLAGLRDQSVYNFCAIPQVMAIATLALVFRNPDMFKRNLKIPKGEACELMMDIGNL 341
Query: 329 TDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
F + I++ K DPN + + I++
Sbjct: 342 RTTCDTFKKYIKIIRKKNTPKDPNFLEVAVKCAKIEQ 378
>gi|403217942|emb|CCK72434.1| hypothetical protein KNAG_0K00660 [Kazachstania naganishii CBS
8797]
Length = 447
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/380 (38%), Positives = 223/380 (58%), Gaps = 21/380 (5%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAEKQIPP---EPHWAFCYSMLHKVSRSFALVIQQLGT 60
++ +L HP + L++ K + + A C +L SRSFA VI +L
Sbjct: 3 VSELLLHPAECIALVQFKFVRKPLFSGVGAGRETADLARCRELLRLTSRSFAAVIMELHP 62
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VL 118
+LR+ V +FYLVLRALDTVEDD +I VKVP+L +F + +W F + + K +
Sbjct: 63 ELRDCVMLFYLVLRALDTVEDDMTIDDAVKVPLLRSFDEKLLLDDWSFDGNSPQEKDRCV 122
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 172
+ +F + F +L Y+D + IT+ MG GMA +I E ++++ +YD YC+YV
Sbjct: 123 LVEFPCILREFHKLRAEYRDVVVRITREMGNGMADYIEDEQFNREGIQTVAEYDRYCHYV 182
Query: 173 AGLVGLGLSKLFYASG--TEDLAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++L +G +++LA + SMGLFLQKTNIIRDY ED+++ R+FWP
Sbjct: 183 AGLVGDGLTQLTVLAGFSSQELADNPQYFESMGLFLQKTNIIRDYREDLDD---GRVFWP 239
Query: 230 REIWSKYVNK----LEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRF 285
+ +WSKY + L + EN++ V C+ND+V NAL H+ED L Y++++ + + F+F
Sbjct: 240 KAVWSKYTKEQDGTLAEFASLENTESGVFCINDLVLNALDHIEDVLTYLASVHEQSSFQF 299
Query: 286 CAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPK 345
CAIPQ+MAI TLAL NN V +G VK+R+G T +I R+ F ++ ++ K
Sbjct: 300 CAIPQVMAIATLALLCNNAAVLQGNVKIRKGTTCWLILRSRTFRGCVEIFEEYLREIRGK 359
Query: 346 INKNDPNATKTLSRVEAIQK 365
+ DPN K R+ I +
Sbjct: 360 VPVRDPNYLKFNVRIGKIDQ 379
>gi|322702671|gb|EFY94302.1| squalene synthase [Metarhizium anisopliae ARSEF 23]
Length = 488
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 222/377 (58%), Gaps = 16/377 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQL 58
MG+L +L HP+ L +++ K+ ++ P C+ L+ SRSFA VIQ+L
Sbjct: 1 MGALYYLL-HPNQLRSIIQWKLWHNPVHRRDPSTESETLKECFRFLNLTSRSFAAVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118
+L + +FYLVLR LDT+EDD +IP KVP+L FH + W + ++ + L
Sbjct: 60 NHELLVPISLFYLVLRGLDTIEDDMTIPLSKKVPLLRNFHDTMEVDGWQYHESQEKDREL 119
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYV 172
+++F V T ++ Y I+DIT +MG GMA + I V +IDDY+ YC+YV
Sbjct: 120 LEKFDVVITELKKIKPTYYAIIKDITIKMGHGMADYAQNDEMIKNGVNTIDDYELYCHYV 179
Query: 173 AGLVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF AS G LA SL+ SMG FLQKTNIIRD ED ++ R ++P
Sbjct: 180 AGLVGEGLTRLFVASELGNPKLAERPSLTESMGQFLQKTNIIRDLREDWSD---GRRWYP 236
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWS++V+K EDL DKA+ C++DMV +AL H E+CL YM+ +R+ ++F F AIP
Sbjct: 237 KEIWSRHVDKWEDLFDPNYEDKALNCISDMVLDALKHCEECLFYMAGMREQSVFNFVAIP 296
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNNMTDVYLAFYDFSNILKPKINK 348
Q MAI TL L + N +V + VK+ +G +++ T N+ V F ++ ++ K +
Sbjct: 297 QGMAIATLELVFRNPDVLKRNVKITKGDACQLMTECTQNLYTVCEVFRRYARRIQKKNDP 356
Query: 349 NDPNATKTLSRVEAIQK 365
DPN R I++
Sbjct: 357 RDPNYLNISVRCAKIEQ 373
>gi|388855491|emb|CCF50937.1| probable farnesyl-diphosphate farnesyltransferase [Ustilago hordei]
Length = 562
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 221/397 (55%), Gaps = 40/397 (10%)
Query: 8 LRHPDDLYPLLKLKMASRQAE--KQIPPEPHWAF-----CYSMLHKVSRSFALVIQQLGT 60
+ HP +L ++ K+ K P E W C++ L SRSFA VI++L
Sbjct: 11 MTHPSELRAMIGYKVWRDPLNDIKANPAESGWDRERMRDCWTFLDLTSRSFAAVIKELKG 70
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVL 118
DL VC+FYLVLRALDT+EDD +IP K+P+L+ F +++ W+F S ++ ++L
Sbjct: 71 DLSRVVCLFYLVLRALDTIEDDMTIPASRKIPLLVDFFKYLEQPGWNFNESGPNEKDRLL 130
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 172
+ +F V + L +GY+ I DIT +MGAGMA +I V + D+D YC++V
Sbjct: 131 LVEFDKVVAEYQLLDEGYRRVISDITAKMGAGMASYIELSAGKDLSVATWGDFDLYCHFV 190
Query: 173 AGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GLS+LF S E LSN MGLFLQKTNIIRDY ED + R FWP
Sbjct: 191 AGLVGEGLSRLFSESRLERPWLGHQLQLSNHMGLFLQKTNIIRDYAEDCQQ---GRHFWP 247
Query: 230 REIW----------SKYVNKLEDLKYEEN---------SDKAVQCLNDMVTNALMHVEDC 270
R W ++ + + ++K N +++ L+ M+ +A+ H
Sbjct: 248 RRCWGDSYARFSSQAQVASGIVEVKPGSNKFKPQEGELGQRSMYVLSSMLLDAMSHATSA 307
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTD 330
L Y++ LR+ +IF FCAIPQ+MAI TL L +NN +VF+ VK+R+G+ +I + N D
Sbjct: 308 LDYLALLREQSIFNFCAIPQVMAIATLELMFNNPDVFKKNVKIRKGIAVGLILKAVNPRD 367
Query: 331 VYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
V F D+S + +++ +DPN T+ + I++ C
Sbjct: 368 VAYVFLDYSRRIHSRLSPSDPNFTRWSVELARIEQWC 404
>gi|302924433|ref|XP_003053888.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734829|gb|EEU48175.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 462
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 218/364 (59%), Gaps = 16/364 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQL 58
MG+L L HP+ L +++ K+ K+ P P C+ L+ SRSFA VIQ+L
Sbjct: 1 MGALY-YLFHPNQLRSIIQWKVWHDPVHKRDPSTESPELQECFRYLNMTSRSFAAVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118
+L + +FYLVLR LDT+EDD ++P D KVP+L FH + W F ++ K L
Sbjct: 60 NHELLVPITLFYLVLRGLDTIEDDMTLPLDKKVPLLREFHNTMEQDGWQFHESQEKDKEL 119
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYV 172
++ F V T ++ Y + I+D+T +MG GMA + I V++ID+Y+ YC+YV
Sbjct: 120 LEHFDVVITELKKIKPQYYEIIKDMTIKMGNGMADYAQNTEMIENGVQTIDEYELYCHYV 179
Query: 173 AGLVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF AS LA SL+ SMG FLQKTNIIRD ED + R ++P
Sbjct: 180 AGLVGEGLTRLFVASELANPKLAERPSLTESMGQFLQKTNIIRDIHEDWED---GRRWYP 236
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWSK+V+K EDL + KA++C+++MV +AL H E+CL YM+ ++D ++F F AIP
Sbjct: 237 KEIWSKHVDKWEDLFDPKQRTKAIECVSEMVLDALKHSEECLFYMAGIKDQSVFNFVAIP 296
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINK 348
Q MAI TL L + N V VK+ +G +++ + T N+ V F ++ ++ K +
Sbjct: 297 QGMAIATLELVFRNPNVLERNVKITKGDACQIMFESTQNLVTVCDVFKRYARRIQAKNDP 356
Query: 349 NDPN 352
DP+
Sbjct: 357 RDPS 360
>gi|358375864|dbj|GAA92439.1| farnesyl-diphosphate farnesyltransferase [Aspergillus kawachii IFO
4308]
Length = 472
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 214/363 (58%), Gaps = 23/363 (6%)
Query: 10 HPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
HP +L +++ K+ R + + E C+ L SRSF+ VI++L +L
Sbjct: 13 HPSELRSIMQWKIWHSPVHERDEKNETETEKA---CFKFLDLTSRSFSAVIKELHPELLM 69
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQF 122
VC+FYL LR LDT+EDDTSIP + K P+L F + W F+ E K L+ QF
Sbjct: 70 PVCVFYLTLRGLDTIEDDTSIPLETKEPLLRGFKDFLEQDGWTFNGNRPEEKDRELLVQF 129
Query: 123 HHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGLV 176
H+V T F ++ YQ I+DIT +MG GMA + K V ++++YD YCYYVAGLV
Sbjct: 130 HNVITEFKKMKPAYQAIIKDITDKMGNGMADYCRKAAFDDASVITVEEYDLYCYYVAGLV 189
Query: 177 GLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++LF + + L L SMGLFLQKTNIIRD ED ++ R FWP+EIW
Sbjct: 190 GEGLTRLFVEAEFGNPALLERARLHKSMGLFLQKTNIIRDIREDDDDG---RRFWPKEIW 246
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SK+V K EDL E+ + A+ C ++MV NAL HVEDCL Y++ LR+ ++F FCAIPQ MA
Sbjct: 247 SKHVTKFEDLFKPEHREAALNCSSEMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQSMA 306
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
I TL LC+ N +F +K+ +G +++ + T N+ + AF ++ + K DPN
Sbjct: 307 IATLELCFRNPAIFERNIKITKGEACQLMFESTQNLRILCAAFRKYARKIHKKNTPKDPN 366
Query: 353 ATK 355
K
Sbjct: 367 FLK 369
>gi|169596014|ref|XP_001791431.1| hypothetical protein SNOG_00755 [Phaeosphaeria nodorum SN15]
gi|160701210|gb|EAT92250.2| hypothetical protein SNOG_00755 [Phaeosphaeria nodorum SN15]
Length = 488
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 204/346 (58%), Gaps = 18/346 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L K SRSF+ VI +L +L V +FYL+LR LDTVEDD +IP + K PIL F
Sbjct: 47 CFFFLEKTSRSFSAVILELHPELLVPVALFYLILRGLDTVEDDMTIPLEKKEPILRDFQN 106
Query: 100 HVYDREWHFS-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
+ W F+ G E + L+ +F+ V F ++ Y+D I+DITKRMG GMA +
Sbjct: 107 LLEQDGWTFNDNGPNEKDRQLLVEFNVVIEEFKKIKPAYRDIIKDITKRMGNGMADYANN 166
Query: 156 ----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V ++ DY+ YC+YVAGLVG GL++LF +G + L L SMG FLQ+
Sbjct: 167 AEHNTNGVNTLKDYELYCHYVAGLVGEGLTRLFVEAGLANEALLRKPELMESMGQFLQQV 226
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NI RD ED+++ R FWPREIWSK+V+ ED+ EN +KA+ ++M+ AL +
Sbjct: 227 NITRDIKEDLDD---GRRFWPREIWSKHVDNFEDMFKPENKEKALAASSEMILTALTRAD 283
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
DCL Y++ LR+ ++F FCAIPQ MAI TL +C+ N +F+ VK+ +G ++ I+ T N
Sbjct: 284 DCLYYLAGLREQSVFNFCAIPQSMAIATLEVCFQNYAIFQKNVKITKGEACQLMIESTQN 343
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK---TLSRVEAIQKACMDS 370
+ V F ++ + K N NDPN K L R+E ++ S
Sbjct: 344 LELVCQVFKKYTRKIHQKNNPNDPNFLKISIALGRIEQFIESIFPS 389
>gi|340517037|gb|EGR47283.1| squalene synthase [Trichoderma reesei QM6a]
Length = 465
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 217/371 (58%), Gaps = 17/371 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP +L +++ K+ ++ P C+ L+ SRSF+ VIQ+L +L
Sbjct: 7 LMHPRELRSIVQWKLWHEPVNRRDPKTESATLQECFRFLNMTSRSFSAVIQELNHELLVP 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
V +FYLVLR LDT+EDD +IP KVP+L FH + W + ++ + L++ F V
Sbjct: 67 VTLFYLVLRGLDTIEDDMTIPLSTKVPMLREFHVTMDQDGWQYHDSKEKDRELLEHFDCV 126
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYVAGLVGLG 179
T +L K Y D I+D+T +MG GMA + I V++I++Y+ YC+YVAGLVG G
Sbjct: 127 ITELKKLKKPYYDIIKDMTFKMGNGMADYAQNTEMIQNGVQTIEEYELYCHYVAGLVGEG 186
Query: 180 LSKLFYASGTEDLA----PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
L++L AS + P+ L+ SMG FLQKTNIIRD ED + R ++P+EIWSK
Sbjct: 187 LTRLLVASNLANPKLGERPE-LTESMGQFLQKTNIIRDIHEDWED---GRRWYPKEIWSK 242
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
+V + EDL + +AV+C++DMV +AL HVEDCL YM+ +RD + F F AIPQ MAI
Sbjct: 243 HVERWEDLFDPKYRTQAVECISDMVLDALKHVEDCLFYMAGMRDQSAFNFVAIPQAMAIA 302
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNAT 354
TL LC+ N V VK+ +G ++ ++ T N+ + F ++ ++ K + DPN
Sbjct: 303 TLELCFRNPAVLERNVKITKGDACQIMLESTQNLQVLCEVFRRYARRIQKKNDPRDPNFL 362
Query: 355 KTLSRVEAIQK 365
+R I++
Sbjct: 363 AISARCAKIEQ 373
>gi|322706213|gb|EFY97794.1| farnesyl-diphosphate farnesyltransferase [Metarhizium anisopliae
ARSEF 23]
Length = 405
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 191/320 (59%), Gaps = 16/320 (5%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPP-EPHWA-FCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP L +++ K+ K+ EP A CY L + SRSF+ VI++L +LR +C
Sbjct: 13 HPHQLRMIIEWKLWHNPLHKRDEDNEPTTAKICYKFLDQTSRSFSPVIKELHPELRLPIC 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
+FYLVLR LDT+EDDTSI K P+L FH + W F+C E K L+ QFH+V
Sbjct: 73 VFYLVLRGLDTIEDDTSISLKTKEPLLRDFHNFLDQDGWTFTCNRPEEKDRELLVQFHNV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGLG 179
T F ++ YQ I+DIT +MG GMA F+ K +++++ YD YC+YVAG+VG G
Sbjct: 133 ITEFKKIKPAYQAIIKDITSQMGNGMADFVRKSALGDVNIKTLEAYDLYCWYVAGVVGEG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++L + D + L SMGL LQK NI RD ED ++ R FWP+EIWSK+
Sbjct: 193 LTRLIVEANMGDARLVENAQLYKSMGLLLQKNNITRDVREDFDD---NRCFWPQEIWSKH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+K EDL E D A+ C ++MV NAL H DC Y+ L D ++F FCAIPQ MA+ T
Sbjct: 250 VDKFEDLFKPEYLDAALNCSSEMVLNALRHTCDCFSYLKCLHDQSVFNFCAIPQSMAMAT 309
Query: 297 LALCYNNIEVFRGVVKMRRG 316
LC+ N +F+ +K+ RG
Sbjct: 310 FELCFRNPAMFQRNIKIPRG 329
>gi|377657484|gb|AFB74175.1| squalene synthase [Talaromyces minioluteus]
gi|377657486|gb|AFB74176.1| squalene synthase [Talaromyces minioluteus]
Length = 471
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 201/328 (61%), Gaps = 15/328 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L+ SRSF+ VI +L +L AV +FYLVLR LDT+EDDTS+P DVK P+L F
Sbjct: 45 CFQFLNLTSRSFSAVILELHPELLVAVTVFYLVLRGLDTIEDDTSVPLDVKEPLLRDFKN 104
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W ++ E K L+ +F +V T + L Y+ I+D+T +MG GMA F+ K
Sbjct: 105 IIEKDGWTWNGNRPEEKDRQLLVEFDNVITEYKALKPAYRKIIKDMTDKMGNGMADFVRK 164
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
++I++YD YCYYVAGLVG GL++LF + + L+ +L SMGLFLQK
Sbjct: 165 AETEGISTQTIEEYDLYCYYVAGLVGDGLTQLFVEAQFGNPGLLSRPNLHKSMGLFLQKI 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWP+EIWSK+V K EDL + + A+ C ++MV NAL HV+
Sbjct: 225 NIIRDIREDHDD---QRHFWPKEIWSKHVEKFEDLFDPKYKEAALNCSSEMVLNALEHVD 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNN 327
+CL Y++ LR+ ++F FCAIPQ MAI TL LC+ N +F +K+ +G +++ + T N
Sbjct: 282 ECLFYLAGLREQSVFNFCAIPQAMAIATLELCFRNYSLFERNIKITKGDACRLMTESTQN 341
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK 355
+ + F ++ + K DPN K
Sbjct: 342 LRVLCETFRTYARKIHQKNTPKDPNFVK 369
>gi|89276805|gb|ABD66601.1| putative squalene synthetase [Tuber borchii]
Length = 417
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 226/385 (58%), Gaps = 25/385 (6%)
Query: 7 VLRHPDDLYPLLKLK-----MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD 61
+L HP+ L +++ K + R EK+ P C+ L SRSF+ VIQ+L +
Sbjct: 9 LLAHPNQLRAIIQWKIWHNPLHERNIEKE---SPTLRRCFEFLDLTSRSFSAVIQELCPE 65
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY-KVLM 119
L +V +FYL+LR LDT+EDD +IP +K P+L +F + W F G KE + L+
Sbjct: 66 LCVSVALFYLILRGLDTIEDDMTIPLGIKEPLLRSFDEILEKEGWSFDGNGPKEKDRQLL 125
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCYYVA 173
+F+ V F L + ++ I+DITK+MG GMA + V ++ DYD YCYYVA
Sbjct: 126 VEFYTVIKEFALLPESHRVIIKDITKKMGNGMADYANNAEHNVNGVNTVADYDLYCYYVA 185
Query: 174 GLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG GL++LF +G + L L NSMGLFLQKTNIIRDY ED+++ R FWP+
Sbjct: 186 GLVGDGLTRLFVDTGKANPALLERPHLINSMGLFLQKTNIIRDYREDLDDK---RRFWPK 242
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
EIW+K++ K E+L EN + A+ C+++M N+L H ++CL Y++ ++D ++F F AIPQ
Sbjct: 243 EIWTKHIEKYEELPLPENEEAALNCISEMCLNSLQHADECLFYLAGIKDQSVFNFTAIPQ 302
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
+MAI TLAL + N +VF+ VK+ +G +++ N+ F + I+ K D
Sbjct: 303 VMAIATLALVFRNKDVFQKNVKIPKGEACELMIEVGNLRSTCDIFRKYMKIIHKKNTPKD 362
Query: 351 P---NATKTLSRVEAIQKACMDSGV 372
P N + TL +VE ++ + V
Sbjct: 363 PNYLNISVTLGKVEQFIESIFPTPV 387
>gi|299744518|ref|XP_001831087.2| squalene synthase [Coprinopsis cinerea okayama7#130]
gi|298406164|gb|EAU90709.2| squalene synthase [Coprinopsis cinerea okayama7#130]
Length = 514
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 210/376 (55%), Gaps = 29/376 (7%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAE--KQIPPEPHWAF-------CYSMLHKVSRSFALV 54
L +L HP + L++ + Q K I P + C+ L SRSFA V
Sbjct: 7 LVLLLTHPLEFRTLVQFWLYHEQKRDIKAIKEHPTSGWDRESMRRCWHFLDLTSRSFAAV 66
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTK 113
I++L DL +C+FYLVLR LDT+EDD +IP DVK PIL FH + W + CG
Sbjct: 67 IKELDGDLARTICMFYLVLRGLDTIEDDMTIPDDVKQPILRRFHEYTVTPGWKYEGCGPN 126
Query: 114 EY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
E + L+ ++ + L Y+ I DI ++M GMA + K + +I +Y
Sbjct: 127 EKDRQLLVEYDTIVEEVNRLAPHYKTVIIDICRKMETGMADYAHKAATTGSIYLSTIAEY 186
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDYLEDINE 220
D YC+YVAGLVG GLS++F ASG E AP LSNSMGL LQKTNIIRDY ED +E
Sbjct: 187 DLYCHYVAGLVGEGLSRIFSASGKE--APWLGEQLELSNSMGLLLQKTNIIRDYREDTDE 244
Query: 221 IPKCRMFWPREIWSKYVNKLEDLKYEE-NSDKAVQCLNDMVTNALMHVEDCLKYMSALRD 279
R FWP+EIW + K YEE N ++A + M+ +AL H ED L Y+ L++
Sbjct: 245 ---QRYFWPKEIWGSFGFKEMKEMYEEGNKERAQWAQSAMILDALRHCEDSLDYLKMLKN 301
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFS 339
++F FCAIP MAI TL LC+ N +F+ +K+R+ A++I R+ N +V L F D++
Sbjct: 302 QSVFNFCAIPATMAIATLELCFMNPAMFQRNIKIRKAEAARLIMRSTNPKEVALIFRDYA 361
Query: 340 NILKPKINKNDPNATK 355
+ K +DP+ K
Sbjct: 362 RKIHQKALPSDPSFLK 377
>gi|392579615|gb|EIW72742.1| hypothetical protein TREMEDRAFT_67037 [Tremella mesenterica DSM
1558]
Length = 512
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 200/335 (59%), Gaps = 17/335 (5%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P C+ L + SRSFA+VI++L DL VCIFYLVLRA DT+EDD ++P VK+P+L
Sbjct: 27 PSMRKCWEFLDRASRSFAMVIKELEGDLARTVCIFYLVLRACDTLEDDMTLPNSVKLPML 86
Query: 95 IAFHRHVYDREWHF-SCGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
+ + +++ W+F G E ++ + +F + F L + YQ IEDI +MG GMA
Sbjct: 87 RSLYLKLHEPGWNFDGSGPNEADRMTLAEFDVIQKEFSMLDERYQLVIEDICMKMGRGMA 146
Query: 153 KFIC--------KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSM 201
F E+ ++ DYD YC+YVAGLVG GLS +F ASG E +A +LSNSM
Sbjct: 147 DFAALATPEKPVAEINTMADYDLYCHYVAGLVGEGLSGIFAASGKERAFIANQLTLSNSM 206
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMV 260
G+ LQKTNI+RD ED+ E R FWPR IW KY + +++L +A+ ++M
Sbjct: 207 GMILQKTNILRDVKEDVEE---GRGFWPRAIWGKYGFDSMKELLDPTREKQALFAASEMT 263
Query: 261 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 320
+AL H D L Y++ +++ ++F F AIP +MAI TL CY N V + VK+RRG T +
Sbjct: 264 LDALRHATDSLDYLTLIKNQSVFNFVAIPPVMAIATLERCYMNPNVLKKNVKIRRGETIQ 323
Query: 321 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
+I R N DV L F ++ + K ++DPN K
Sbjct: 324 LILRATNPRDVALIFRSYARKIHQKTARDDPNLLK 358
>gi|370344535|gb|AEX26931.1| squalene synthase 1-3 [Solanum tuberosum]
Length = 136
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/136 (85%), Positives = 127/136 (93%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L A+L+ PDDLYPL+KLK+A+R AEKQIPPEPHW FCY ML KVSRSFALVIQQL
Sbjct: 1 MGTLRAILKTPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV 60
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHF+CGTKEYKVLMD
Sbjct: 61 ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD 120
Query: 121 QFHHVSTAFLELGKGY 136
QFHHVSTAFLELGK Y
Sbjct: 121 QFHHVSTAFLELGKLY 136
>gi|242780231|ref|XP_002479552.1| farnesyl-diphosphate farnesyltransferase, putative [Talaromyces
stipitatus ATCC 10500]
gi|218719699|gb|EED19118.1| farnesyl-diphosphate farnesyltransferase, putative [Talaromyces
stipitatus ATCC 10500]
Length = 471
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 219/370 (59%), Gaps = 17/370 (4%)
Query: 10 HPDDLYPLLKLKMASRQA-EKQIPPEPH-WAFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP +L +++ K+ E+ +P C +L SRSF+ VI++L +L AV
Sbjct: 13 HPSELRSIVQWKVWHNPPHERDTSKDPETLKKCLYLLDLTSRSFSAVIKELHPELLVAVA 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
+FYLVLR LDT+EDDTS+P DVK P+L F + W ++ E K ++ +F +V
Sbjct: 73 VFYLVLRGLDTIEDDTSVPLDVKEPLLRDFKNIIEKDGWTWNGNRPEEKDRQVLVEFDNV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESI-----DDYDEYCYYVAGLVGLG 179
+ +L Y+ I+D+T +MG GMA F+ K E E I ++YD YCYYVAGLVG G
Sbjct: 133 IAEYKKLKPAYRAIIKDMTDKMGNGMADFVRKAETEGISVKTNEEYDLYCYYVAGLVGDG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF + + L+ +L SMGLFLQKTNIIRD ED ++ R FWP+EIWSK+
Sbjct: 193 LTQLFVEAQFGNPGLLSRPNLHKSMGLFLQKTNIIRDIREDHDD---QRHFWPQEIWSKH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V K EDL + A+ C ++MV NAL HV++CL Y++ LR+ ++F FCAIPQ MAI T
Sbjct: 250 VEKFEDLFDPRCKEAALNCSSEMVLNALEHVDECLFYLAGLREQSVFNFCAIPQAMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
L LC+ N +F +K+++G +++ + T N+ + F ++ + K DPN K
Sbjct: 310 LELCFRNYSMFERNIKIKKGDACRLMFESTQNLRVLCETFRTYARRIHQKNTPKDPNFVK 369
Query: 356 TLSRVEAIQK 365
+I+K
Sbjct: 370 ISIACGSIEK 379
>gi|320589748|gb|EFX02204.1| squalene synthetase [Grosmannia clavigera kw1407]
Length = 461
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 211/363 (58%), Gaps = 23/363 (6%)
Query: 7 VLRHPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTD 61
+L HP++L +L+ K+ R A K+ P E C+ L SRSFA VIQ+L +
Sbjct: 10 LLCHPEELRAVLQWKVWHEPVHRRDASKETPTE---KACFQHLVLTSRSFAAVIQELTPE 66
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLM 119
L +VC+FYLVLR LDT+EDD +IP + KVP+L F + W F+ G E + L+
Sbjct: 67 LLMSVCLFYLVLRGLDTIEDDMTIPLEKKVPLLRGFDDLMEQDGWTFTENGPNEKDRELL 126
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESID------DYDEYCYYVA 173
F V T L Y I DIT +MG GMA + +S++ +Y+ YC+YVA
Sbjct: 127 VHFDDVVTELKRLNPAYYAIIRDITTKMGNGMADYALNAEQSVNGIATIAEYELYCHYVA 186
Query: 174 GLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG GL++LF S + + L+ SMG FLQKTNIIRD ED + R FWP+
Sbjct: 187 GLVGEGLTRLFVESKLANPQLMNRPQLTESMGQFLQKTNIIRDIHEDFED---GRRFWPK 243
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
+IWSKYV++ +DL + +A+ C ++MV NAL H EDCL YM+A+R+ ++F F AIPQ
Sbjct: 244 DIWSKYVDRFDDLFDPAHLQQALYCQSEMVLNALKHAEDCLFYMAAIREQSVFNFVAIPQ 303
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKN 349
MAI TL L + N +VF+ VK+ +G ++ +D T N+ F ++ + + +
Sbjct: 304 TMAIATLELVFQNPDVFKRNVKITKGTACRLMLDSTQNLQVACEVFRRYARRIHQRNDPR 363
Query: 350 DPN 352
DPN
Sbjct: 364 DPN 366
>gi|350637501|gb|EHA25858.1| hypothetical protein ASPNIDRAFT_54483 [Aspergillus niger ATCC 1015]
Length = 472
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 214/363 (58%), Gaps = 23/363 (6%)
Query: 10 HPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
HP +L +L+ K+ R + + E C+ L SRSF+ VI++L +L
Sbjct: 13 HPSELRSILQWKIWHSPVHERNEKNETETEKA---CFKFLDLTSRSFSAVIKELHPELLM 69
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQF 122
VC+FYL LR LDT+EDDTSIP + K P+L F + W F+ E K L+ QF
Sbjct: 70 PVCVFYLTLRGLDTIEDDTSIPLETKEPLLRGFKDFLEQDGWTFNGNRPEEKDRELLVQF 129
Query: 123 HHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGLV 176
H+V T F ++ YQ I+DIT +MG GMA + K V ++++YD YCYYVAGLV
Sbjct: 130 HNVITEFKKMKPAYQAIIKDITDKMGNGMADYCRKAAFDDVSVITVEEYDLYCYYVAGLV 189
Query: 177 GLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++LF + + L L SMGLFLQKTNIIRD ED ++ R FWP+EIW
Sbjct: 190 GEGLTRLFVEAEFGNPALLERARLHKSMGLFLQKTNIIRDIREDDDDG---RRFWPKEIW 246
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SK+V + +DL E+ + A+ C ++MV NAL HVEDCL Y++ LR+ ++F FCAIPQ MA
Sbjct: 247 SKHVKQFDDLFKPEHREAALNCSSEMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQSMA 306
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
I TL LC+ N +F +K+ +G +++ + T N+ + AF ++ + K DPN
Sbjct: 307 IATLELCFRNPAIFERNIKITKGEACQLMFESTQNLRILCAAFRKYARKIHKKNTPKDPN 366
Query: 353 ATK 355
K
Sbjct: 367 FLK 369
>gi|145246052|ref|XP_001395275.1| squalene synthase [Aspergillus niger CBS 513.88]
gi|134079987|emb|CAK48471.1| unnamed protein product [Aspergillus niger]
Length = 472
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 214/363 (58%), Gaps = 23/363 (6%)
Query: 10 HPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
HP +L +L+ K+ R + + E C+ L SRSF+ VI++L +L
Sbjct: 13 HPSELRSILQWKIWHSPVHERNEKNETETEKA---CFKFLDLTSRSFSAVIKELHPELLM 69
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQF 122
VC+FYL LR LDT+EDDTSIP + K P+L F + W F+ E K L+ QF
Sbjct: 70 PVCVFYLTLRGLDTIEDDTSIPLETKEPLLRGFKDFLEQDGWTFNGNRPEEKDRELLVQF 129
Query: 123 HHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK------EVESIDDYDEYCYYVAGLV 176
H+V T F ++ YQ I+DIT +MG GMA + K V ++++YD YCYYVAGLV
Sbjct: 130 HNVITEFKKMKPAYQAIIKDITDKMGNGMADYCRKAAFDDASVITVEEYDLYCYYVAGLV 189
Query: 177 GLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++LF + + L L SMGLFLQKTNIIRD ED ++ R FWP+EIW
Sbjct: 190 GEGLTRLFVEAEFGNPALLERARLHKSMGLFLQKTNIIRDIREDDDDG---RRFWPKEIW 246
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SK+V + +DL E+ + A+ C ++MV NAL HVEDCL Y++ LR+ ++F FCAIPQ MA
Sbjct: 247 SKHVKQFDDLFKPEHREAALNCSSEMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQSMA 306
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
I TL LC+ N +F +K+ +G +++ + T N+ + AF ++ + K DPN
Sbjct: 307 IATLELCFRNPAIFERNIKITKGEACQLMFESTQNLRILCAAFRKYARKIHKKNTPKDPN 366
Query: 353 ATK 355
K
Sbjct: 367 FLK 369
>gi|358390414|gb|EHK39820.1| squalene synthase [Trichoderma atroviride IMI 206040]
Length = 461
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 220/364 (60%), Gaps = 16/364 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEP--HWAFCYSMLHKVSRSFALVIQQL 58
MG+L +L HP L +++ K+ ++ P + C+ L+ SRSF+ VIQ+L
Sbjct: 1 MGALYYLL-HPAQLRSMIQWKLWHDPVHRRDPSTECETLSECFRYLNLTSRSFSAVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118
+L + +FYLVLR LDT+EDD +IP DVKVP+L FH + W + ++ L
Sbjct: 60 NHELLVPITLFYLVLRGLDTIEDDMTIPLDVKVPMLRQFHVTMEQDGWQYHDSKEKDAEL 119
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYV 172
++ F V T +L K Y + I+D+T +MG GMA + I V++I++Y+ YC+YV
Sbjct: 120 LEHFDVVITELKKLKKPYYEIIKDMTIKMGNGMADYAQNTEMIENGVQTIEEYELYCHYV 179
Query: 173 AGLVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF AS LA +L+ SMG FLQKTNIIRD ED + R ++P
Sbjct: 180 AGLVGEGLTRLFVASELANPKLAERPALTESMGQFLQKTNIIRDIHEDWGD---RRRWYP 236
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWSK+V+K EDL + +A+ C+++MV +AL HVEDCL YM+ +RD + F F AIP
Sbjct: 237 KEIWSKHVDKWEDLFDPKYLPQAINCVSEMVLDALKHVEDCLFYMAGMRDQSAFNFVAIP 296
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINK 348
Q MAI TL LC+ N V + +K+ +G ++ ++ T N+ + F ++ ++ K +
Sbjct: 297 QGMAIATLELCFRNPAVLQSHIKITKGDACQIMLESTQNLQMLCEVFRRYARRIQKKNDP 356
Query: 349 NDPN 352
DPN
Sbjct: 357 RDPN 360
>gi|452847044|gb|EME48976.1| hypothetical protein DOTSEDRAFT_142519 [Dothistroma septosporum
NZE10]
Length = 488
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 194/325 (59%), Gaps = 15/325 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF+ VI++L +L VC+FYL+LR LDTVEDD SIP VK P+L FH
Sbjct: 45 CFHFLDLTSRSFSAVIKELHPELLVPVCLFYLILRGLDTVEDDMSIPLHVKEPMLREFHN 104
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
H+ D W F + K L+ +F V+ F ++ YQ I+DITKRMG GMA +
Sbjct: 105 HIEDESWTFDGNGPDEKDRELLVKFDVVAKEFNKIKAAYQTVIKDITKRMGNGMADYAKN 164
Query: 156 ----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V++I DY+ YC+YVAGLVG GL++LF + + L L SMG LQ+T
Sbjct: 165 ADHNANGVKTIKDYELYCHYVAGLVGEGLTRLFVEAKLANPALLQRPELMESMGQLLQQT 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED + R FWPRE+WSKYV++ DL EN + A+QC ++MV AL +
Sbjct: 225 NIIRDIREDHED---KRYFWPREVWSKYVDQFGDLFLPENREMALQCSSEMVLIALNRAD 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNN 327
+CL YM+ +++ ++F F AIPQ MAI TL LC+ N +F VK+ +G +++ + T N
Sbjct: 282 ECLFYMAGVKEQSVFNFVAIPQSMAIATLELCFQNEAIFDRNVKITKGSACQLMTESTQN 341
Query: 328 MTDVYLAFYDFSNILKPKINKNDPN 352
+ V F F+ + K +DP+
Sbjct: 342 LQLVCEVFRRFARKIHRKNKPSDPH 366
>gi|396469131|ref|XP_003838341.1| similar to Farnesyl-diphosphate farnesyl transferase (squalene
synthase) [Leptosphaeria maculans JN3]
gi|312214908|emb|CBX94862.1| similar to Farnesyl-diphosphate farnesyl transferase (squalene
synthase) [Leptosphaeria maculans JN3]
Length = 483
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 219/378 (57%), Gaps = 20/378 (5%)
Query: 10 HPDDLYPLLKLKMASRQA-EKQIPPEP-HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP++L +++ K+ E+Q E C+ L SRSF++VI +L +L +
Sbjct: 13 HPNELRSIIQWKVWHNPVHERQEALESASLKRCFHFLGLTSRSFSMVILELHPELLVPIA 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFHHV 125
+FYLVLR LDTVEDD +IP + K PIL F + W F+ G E + L+ +F+ V
Sbjct: 73 LFYLVLRGLDTVEDDMTIPLEKKEPILRNFQNFLDQEGWTFTENGPNEKDRQLLVEFNVV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMA------KFICKEVESIDDYDEYCYYVAGLVGLG 179
F ++ YQ+ I+DITKRMG GMA +F V +I DY+ YC+YVAGLVG G
Sbjct: 133 IEEFKKIKPAYQEIIKDITKRMGNGMADYANNAEFNNVGVNTIQDYELYCHYVAGLVGEG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++F G + L L SMG FLQ+ NI RD ED+++ R FWP+EIWSK+
Sbjct: 193 VTRMFVEGGLANAALLQKPELMESMGQFLQQVNITRDIKEDLDD---GRRFWPKEIWSKH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+K EDL EN +KA+ ++M+ AL +DCL Y++ +R+ ++F FCAIPQ MAI T
Sbjct: 250 VDKFEDLFKPENKEKALATSSEMILTALNRADDCLYYLAGIREQSVFNFCAIPQSMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
L C+ N +VF+ VK+ +G ++ ++ T N+ V F ++ + K N +DPN K
Sbjct: 310 LNACFQNYDVFQKNVKITKGEACQLMVESTQNLQLVCEVFRRYARKIAKKNNPHDPNFLK 369
Query: 356 ---TLSRVEAIQKACMDS 370
L R+E ++ S
Sbjct: 370 ISIALGRIEQFIESIFPS 387
>gi|398409474|ref|XP_003856202.1| ERG9, squalene synthase [Zymoseptoria tritici IPO323]
gi|339476087|gb|EGP91178.1| ERG9, squalene synthase [Zymoseptoria tritici IPO323]
Length = 490
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 212/365 (58%), Gaps = 17/365 (4%)
Query: 2 GSLAAVLRHPDDLYPLLKLKMASRQA-EKQIPPEPH-WAFCYSMLHKVSRSFALVIQQLG 59
S+A L H +L +++ K+ E+ E H C+ L SRSFA VIQ+L
Sbjct: 5 SSIAYYLVHVSELRAIIQWKVWHNPVHERDESKESHDLKECFRFLQLTSRSFAAVIQELH 64
Query: 60 TDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY-KV 117
+L VC+FYL+LR LDTVEDD +I K P+L FH H+ D W+F G E +
Sbjct: 65 PELLVPVCLFYLILRGLDTVEDDMTISIAAKEPLLRDFHNHIEDEAWNFDGNGPNEKDRE 124
Query: 118 LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYY 171
L+ +F V+ F + Y+ I+DITKRMG GMA + + V++I DY+ YC+Y
Sbjct: 125 LLVKFDCVTREFNKCKDAYRAIIKDITKRMGNGMADYAKNADHLANGVQTIKDYELYCHY 184
Query: 172 VAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW 228
VAGLVG GL++LF + + L L SMG LQ+TNIIRD ED ++ R FW
Sbjct: 185 VAGLVGEGLTRLFVEAKLANPALLQRPELMESMGQLLQQTNIIRDIREDHDDK---RYFW 241
Query: 229 PREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAI 288
P+EIWSK+V K DL +N +KA+QC ++MV NAL ++CL YM+ +++ ++F F AI
Sbjct: 242 PKEIWSKHVEKFNDLFEPQNREKALQCSSEMVLNALKKADECLFYMAGIKEQSVFNFVAI 301
Query: 289 PQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNNMTDVYLAFYDFSNILKPKIN 347
PQ MA+ TL LC+ N +F VK+ +G +++ + T N+ V F ++ + K
Sbjct: 302 PQSMAMATLELCFQNPTIFDRNVKITKGSACELMTQSTQNLQLVCEIFRKYARKIHKKNK 361
Query: 348 KNDPN 352
+DPN
Sbjct: 362 PSDPN 366
>gi|353240801|emb|CCA72652.1| related to farnesyl-diphosphate farnesyltransferase [Piriformospora
indica DSM 11827]
Length = 500
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 192/327 (58%), Gaps = 17/327 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L K SRSF+ VI++L DL +C+FYLVLR LDT+EDD ++ ++K PIL FH
Sbjct: 52 CWEFLDKTSRSFSAVIKELDGDLARVICLFYLVLRGLDTIEDDMTLSDEIKQPILRTFHS 111
Query: 100 HVYDREWHF-SCGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W F CG E + L+ +F +V T L ++ I DIT +M GMA F +
Sbjct: 112 KLSVEGWTFDGCGPFEKDRQLLVEFDNVITEMGHLDPLCREVITDITLKMETGMADFAHR 171
Query: 158 EVES--------IDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPDSL--SNSMGLFLQ 206
S I +YD YC+YVAGLVG GLS+LF A+G E + D L SNSMGL LQ
Sbjct: 172 AATSKTVPYLTTIAEYDLYCHYVAGLVGEGLSRLFAATGKEREWIADQLVLSNSMGLLLQ 231
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALM 265
KTNI+RD+ ED +E R FWP+EIW Y + E++ E DKA+ L+ M NAL
Sbjct: 232 KTNILRDFREDADER---RYFWPQEIWGAYGFKRPEEMYAPEAGDKALWALSHMTLNALS 288
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H D L Y+ LR+ +F FCAIP +MAI TL LC+ N VF+ VK+R+G ++I +
Sbjct: 289 HCVDALDYLVLLRNQTVFNFCAIPAVMAIATLELCFMNPAVFQRNVKIRKGEAVRLIMTS 348
Query: 326 NNMTDVYLAFYDFSNILKPKINKNDPN 352
N V AF D++ + K DPN
Sbjct: 349 TNPMAVSYAFRDYARKIHRKAVVADPN 375
>gi|193786634|dbj|BAG51957.1| unnamed protein product [Homo sapiens]
Length = 306
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 178/274 (64%), Gaps = 10/274 (3%)
Query: 113 KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYV 172
K+ +VL D F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YV
Sbjct: 6 KDRQVLED-FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYV 64
Query: 173 AGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG+GLS+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP
Sbjct: 65 AGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWP 121
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+E+WS+YV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ ++F FCAIP
Sbjct: 122 QEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIP 181
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
Q+MAI TLA CYNN +VF+G VK+R+G ++ NM V Y + + +I +
Sbjct: 182 QVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDS 241
Query: 350 DPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
DP+++KT + I+ + + L R HYS
Sbjct: 242 DPSSSKTRQIISTIRTQNLPNCQLISRS---HYS 272
>gi|393233869|gb|EJD41437.1| farnesyl-diphosphate farnesyltransferase [Auricularia delicata
TFB-10046 SS5]
Length = 493
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 198/337 (58%), Gaps = 26/337 (7%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF+ VI++L DL +C+FYLVLR LDT+EDD ++ DVK P+L F +
Sbjct: 52 CWKYLDDTSRSFSAVIKELDGDLARVICLFYLVLRGLDTIEDDMTLADDVKQPLLRDFAK 111
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
W F+ + K L+ +F +V L L + Y+ I DIT++M GMA + K
Sbjct: 112 SCVTAGWTFTGSGPDEKDRQLLVEFDNVVAEMLLLPEQYRAVIVDITQKMADGMAIYAHK 171
Query: 158 E----------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP---DSL--SNSMG 202
V +D YC+YVAGLVG G+S+LF ASG E AP D L SNSMG
Sbjct: 172 AALAASPEELFVPDGPAFDLYCHYVAGLVGEGVSRLFSASGKE--APYVADELVLSNSMG 229
Query: 203 LFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENS---DKAVQCLND 258
L LQKTNI+RDY ED+++ R FWPRE W++ DL+ E + +A+ L++
Sbjct: 230 LMLQKTNILRDYREDVDD---NRYFWPREFWARQGFAHQGDLRTENDPAGRQRAMWVLSE 286
Query: 259 MVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLT 318
MV +AL H EDCL Y+S LR+ ++F FCAIPQ MA+ TLALC+ N VF VK+R+
Sbjct: 287 MVLDALRHAEDCLDYLSLLRNQSVFNFCAIPQTMAMATLALCFMNGRVFERNVKIRKAAA 346
Query: 319 AKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
++I R+ N DV F D++ + K + DPN K
Sbjct: 347 VELIMRSTNPRDVAYIFRDYARQIHAKASPADPNFVK 383
>gi|409081139|gb|EKM81498.1| hypothetical protein AGABI1DRAFT_21221, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 413
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 213/386 (55%), Gaps = 25/386 (6%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAE--KQIPPEPHWAF-------CYSMLHKVSRSFALV 54
LA +L HP + LL+ + Q K + P + C+ L SRSF+ V
Sbjct: 7 LALLLFHPLEFRTLLQFYLYHEQKRDIKALKEHPTSGWDRQSMRRCWDFLDMTSRSFSAV 66
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTK 113
I++L DL +C+FYLVLR LDT+EDD +IP VK PIL FH + W F CG
Sbjct: 67 IKELDGDLARTICLFYLVLRGLDTIEDDMTIPDKVKQPILRKFHELTVEHGWKFDGCGPN 126
Query: 114 EY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
E + L+ ++ + L +++ I DI +M GMA F + + ++ +Y
Sbjct: 127 EKDRQLLVEYDTIVEEVNRLDPSFKEVIIDICHKMENGMADFAHQAATTGKIYIATVAEY 186
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIP 222
D YC+YVAGLVG GLS++F ASG E L LSNSMGL LQKTNIIRDY ED ++
Sbjct: 187 DLYCHYVAGLVGEGLSRIFTASGKEAEWLGQQLELSNSMGLLLQKTNIIRDYREDTDDQ- 245
Query: 223 KCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA 281
R FWP+EIW KY N+++++ S+KA + M+ +AL H D L+Y+ L++
Sbjct: 246 --RYFWPKEIWGKYGFNEMKEMYAPGASEKAQWVQSGMILDALRHATDALEYLRFLKNQT 303
Query: 282 IFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNI 341
IF FCAIP MAI TL LC+ N ++F +K+R+ A++I R+ N DV F +++
Sbjct: 304 IFNFCAIPASMAIATLELCFMNPDMFERNIKIRKATAAQLIMRSTNPRDVGQIFCEYARK 363
Query: 342 LKPKINKNDPNATKTLSRVEAIQKAC 367
+ K DPN + I++ C
Sbjct: 364 IHAKAVPTDPNFMQISVACGKIEQWC 389
>gi|426196373|gb|EKV46301.1| hypothetical protein AGABI2DRAFT_50291, partial [Agaricus bisporus
var. bisporus H97]
Length = 413
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 213/386 (55%), Gaps = 25/386 (6%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAE--KQIPPEPHWAF-------CYSMLHKVSRSFALV 54
LA +L HP + LL+ + Q K + P + C+ L SRSF+ V
Sbjct: 7 LALLLFHPLEFRTLLQFYLYHEQKRDIKALKEHPTSGWDRQSMRRCWDFLDMTSRSFSAV 66
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTK 113
I++L DL +C+FYLVLR LDT+EDD +IP VK PIL FH + W F CG
Sbjct: 67 IKELDGDLARTICLFYLVLRGLDTIEDDMTIPDKVKQPILRKFHELTVEHGWKFDGCGPN 126
Query: 114 EY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
E + L+ ++ + L +++ I DI +M GMA F + + ++ +Y
Sbjct: 127 EKDRQLLVEYDTIVEEVNRLDPSFKEVIIDICHKMENGMADFAHQAATTGKIYIATVAEY 186
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLEDINEIP 222
D YC+YVAGLVG GLS++F ASG E L LSNSMGL LQKTNIIRDY ED ++
Sbjct: 187 DLYCHYVAGLVGEGLSRIFTASGKEAEWLGQQLELSNSMGLLLQKTNIIRDYREDTDDQ- 245
Query: 223 KCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA 281
R FWP+EIW KY N+++++ S+KA + M+ +AL H D L+Y+ L++
Sbjct: 246 --RYFWPKEIWGKYGFNEMKEMYAPGASEKAQWVQSGMILDALRHATDALEYLRFLKNQT 303
Query: 282 IFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNI 341
IF FCAIP MAI TL LC+ N ++F +K+R+ A++I R+ N DV F +++
Sbjct: 304 IFNFCAIPASMAISTLELCFMNPDMFERNIKIRKATAAQLIMRSTNPRDVGQIFCEYARK 363
Query: 342 LKPKINKNDPNATKTLSRVEAIQKAC 367
+ K DPN + I++ C
Sbjct: 364 IHAKAVPTDPNFMQISVACGKIEQWC 389
>gi|403065179|gb|AFR13032.1| squalene synthase [Wolfiporia cocos]
gi|403065181|gb|AFR13033.1| squalene synthase [Wolfiporia cocos]
Length = 498
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 216/403 (53%), Gaps = 41/403 (10%)
Query: 1 MGSLAAV---LRHPDDLYPLLKLKMASRQAEKQIPPEPH----W-----AFCYSMLHKVS 48
MG+L+ + L HP + LL+ K+ P H W C+ L S
Sbjct: 1 MGALSMLVLLLTHPLEFRTLLQYKLWHESNRDISAPSEHVHSGWDRKSMRRCWYFLDMTS 60
Query: 49 RSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF 108
RSFA VI++L DL +C+FYLVLRALDT+EDD ++P + K P+L AFH H W F
Sbjct: 61 RSFAGVIRELEGDLARVICLFYLVLRALDTIEDDMTLPDEKKQPLLRAFHEHAVTPGWTF 120
Query: 109 SCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------V 159
+ + K L+ +++ VS L Y+D I DI +++ GMA + + V
Sbjct: 121 AENGPDEKDRQLLVEYNVVSEEMNRLDACYRDVIIDIAQKVETGMADYAHRAATTGQLYV 180
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDY 214
E I DYD YC+YVAGLVG G+++L+ ASG E AP L+NSMGL LQKTNIIRDY
Sbjct: 181 EKISDYDLYCHYVAGLVGEGVTRLWSASGKE--APWLGEQLELANSMGLMLQKTNIIRDY 238
Query: 215 LEDINEIPKCRMFWPREIWSKYV----------NKLEDLKYEENSDKAVQCLNDMVTNAL 264
ED+ E R FWPREIW + + + ++ N +A+ + MV + L
Sbjct: 239 REDVEE---GRFFWPREIWGRELYGKALGRPAFKDMPEMWQPGNEQQALWVQSAMVVDVL 295
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
H D L Y+ L+ ++F FCAIPQ MA+ TL LC+ N E+F+ +K+R+ A +I R
Sbjct: 296 SHAVDSLDYLRLLKTQSVFNFCAIPQTMAMATLCLCFMNYEMFKRNIKIRKAEAASLIMR 355
Query: 325 TNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
+ N DV F D++ + K DP+ + I++ C
Sbjct: 356 STNPRDVAYLFRDYARKIHRKAVPEDPSFLQISVACGKIEQWC 398
>gi|389738101|gb|EIM79305.1| squalene synthase [Stereum hirsutum FP-91666 SS1]
Length = 520
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 215/399 (53%), Gaps = 56/399 (14%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF----------CYSMLHKVSRSFAL 53
L +L HP++ L++ M +++ I +A C+ +L K SRSF+
Sbjct: 7 LTLLLTHPNEFRTLVQFWMF-HDSKRDISNPKEYATSGWDRESMKKCWELLDKTSRSFSA 65
Query: 54 VIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTK 113
VI++L DL A+C+FY+VLR LDT+EDD +I +K P+L +FH W F
Sbjct: 66 VIKELDGDLARAICLFYIVLRGLDTIEDDMTIADSIKQPLLRSFHEKTLTPGWTFDGNGP 125
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------------- 158
E K +++ ++ V L GY++ I DI +M GMA + +
Sbjct: 126 EEKDRIVLVEYDKVVEEVGRLEPGYREVIVDICHKMEIGMADYAHRASSSASSSSTPSPI 185
Query: 159 -VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP-----DSLSNSMGLFLQKTNIIR 212
+ +I +YD YC+YVAGLVG GLS+++ ASG E AP LSNSMGL LQKTNIIR
Sbjct: 186 YLSTIAEYDLYCHYVAGLVGEGLSRIWAASGKE--APYLGEMKELSNSMGLLLQKTNIIR 243
Query: 213 DYLEDINEIPKCRMFWPREIW--SKYV--------------NKLEDL---KYEENSDKAV 253
D+ ED ++ R FWPREIW S+Y+ ++EDL + E +A+
Sbjct: 244 DFREDADQ---GRFFWPREIWGRSEYIIASGVPLTPSLEKGGRVEDLYQDRTEAGRRRAL 300
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKM 313
+ MV +AL H D L Y+ LR+ +F FCAIP +MA+ TL LC+ N EVF VK+
Sbjct: 301 YVQSGMVLDALRHATDSLDYLRLLRNQTVFNFCAIPAVMAMATLELCFANGEVFERHVKI 360
Query: 314 RRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
R+ + AK+I + N DV F D++ + K N DPN
Sbjct: 361 RKAVAAKLIMNSTNPRDVAYMFRDYARAIHKKSNPADPN 399
>gi|367047549|ref|XP_003654154.1| farnesyl-diphosphate farnesyl transferase [Thielavia terrestris
NRRL 8126]
gi|347001417|gb|AEO67818.1| farnesyl-diphosphate farnesyl transferase [Thielavia terrestris
NRRL 8126]
Length = 466
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPHWA--FCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP++L +++ K+ K+ P + C+ L+ SRSFA VIQ+L +L VC
Sbjct: 13 HPNELRSIIQWKVWHEPVHKRDPSKETATEKSCFHYLNMTSRSFAAVIQELNPELLMPVC 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLMDQFHHV 125
+FYLVLR LDT+EDD +I K P+L FH+++ W F + ++ + L+ F V
Sbjct: 73 LFYLVLRGLDTIEDDMTIDIKEKEPLLRNFHKYMEQDGWTFDKNGPNEKDRDLLVHFDDV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGLG 179
++ K Y + I+DIT +MG GMA + V +I DY+ YC+YVAGLVG G
Sbjct: 133 IVELKKVKKPYYEIIKDITVKMGNGMADYALNAEHNINGVNTIADYELYCHYVAGLVGEG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF S + L L+ SMG FLQKTNIIRD ED + R FWP+E+WSKY
Sbjct: 193 LTRLFVKSELANPQLLVRMDLTESMGQFLQKTNIIRDVHEDWLD---KRRFWPKEVWSKY 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+K +DL E+ +KA+QC +++V NAL H ++CL YM+ +RD ++F F AIPQ MAI T
Sbjct: 250 VDKWDDLFAPEHREKALQCSSELVLNALKHADECLFYMAGIRDQSVFNFVAIPQSMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
L L + N ++F VK+ +G ++ ++ T N+ V F ++ + K + DPN
Sbjct: 310 LELVFRNPDIFERNVKITKGDACRLMLESTQNLRVVCDVFRRYARRIHKKNDPRDPN 366
>gi|302691706|ref|XP_003035532.1| hypothetical protein SCHCODRAFT_84687 [Schizophyllum commune H4-8]
gi|300109228|gb|EFJ00630.1| hypothetical protein SCHCODRAFT_84687 [Schizophyllum commune H4-8]
Length = 506
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 212/389 (54%), Gaps = 35/389 (8%)
Query: 7 VLRHPDDLYPLLKLKMASRQAEKQIPPEPH----W-----AFCYSMLHKVSRSFALVIQQ 57
L HP++ L++ + Q + H W C+ L SRSFA VI++
Sbjct: 10 ALTHPNEFRTLVQFYINHEQKRDITAMQEHETSGWDRESMRRCWHFLDLTSRSFAAVIKE 69
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEY 115
L DL VC+FYLVLR LDT+EDD +IP +VK PIL FH H W F S ++
Sbjct: 70 LEGDLARVVCLFYLVLRGLDTIEDDMTIPDEVKQPILRKFHEHTVTPGWTFKESGPNEKD 129
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDYDEY 168
+ L+ +++ V L Y+D I DI +M GMA + + +E +DYD Y
Sbjct: 130 RQLLVEYNVVVEELHILQPEYRDIIVDICAKMEVGMADYAHRHATTGSVYLEKTEDYDLY 189
Query: 169 CYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDYLEDINEIPK 223
C+YVAGLVG G S+LF AS E AP L+NSMGLFLQKTNIIRD+ ED++E
Sbjct: 190 CHYVAGLVGEGCSRLFTASKKE--APWLGTELELANSMGLFLQKTNIIRDFREDVDER-- 245
Query: 224 CRMFWPREIWSKYVNKLEDLKY-----EENSDKAVQCLNDMVTNALMHVEDCLKYMSALR 278
R FWPREIW ++ D+K E ++A+ + M+ NAL HV D L Y+ L+
Sbjct: 246 -RFFWPREIWGQF--GFGDVKEMCGTEPEVVERALYAQSAMILNALNHVPDVLDYLRCLK 302
Query: 279 DHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDF 338
+ ++F FCAIPQ MAI TL LC+ N E+F+ +K+R+ A +I + N +V F +
Sbjct: 303 NQSVFNFCAIPQTMAIATLELCFMNPEMFQRNIKIRKAAAADLIMNSTNPREVAEIFRKY 362
Query: 339 SNILKPKINKNDPNATKTLSRVEAIQKAC 367
+ L + + DPN + I++ C
Sbjct: 363 TRKLHSRASPKDPNFLRISVACGKIEQWC 391
>gi|400598173|gb|EJP65893.1| squalene synthase [Beauveria bassiana ARSEF 2860]
Length = 466
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 214/370 (57%), Gaps = 15/370 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP+ L +++ K+ ++ + C+ L+ SRSFA+VIQ+L +L +
Sbjct: 7 LMHPNQLRSIIQWKLWHEPVHRRDTSQESANLKECFRYLNMTSRSFAMVIQELNPELLVS 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
V +FYLVLR LDT+EDD +IP D K P+L FH + W F ++ L++ F V
Sbjct: 67 VALFYLVLRGLDTIEDDMTIPLDKKTPLLRNFHDTMEIDGWQFHGSKEKDAELLEHFDVV 126
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYVAGLVGLG 179
L Y + I+D+TK+MG GMA + I +++I+DY+ YC+YVAGLVG G
Sbjct: 127 IAELKNLKPQYYEIIKDLTKKMGNGMADYAADTDKIENGLQTIEDYELYCHYVAGLVGEG 186
Query: 180 LSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF S LA SL+ SMG FLQKTNIIRD ED + R ++P+EIWSK+
Sbjct: 187 LTRLFVTSELANPKLAERPSLTESMGQFLQKTNIIRDIHEDWVD---GRRWYPKEIWSKH 243
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+K EDL ++A+ C+++MV +AL HVE+CL YM+ +RD + F F AIPQ MAI T
Sbjct: 244 VDKWEDLFELSKREQALNCISEMVLDALKHVEECLFYMAGMRDQSCFNFVAIPQTMAIAT 303
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
L L + N + VK+ +G T +++ + T N+ V F + + K + DPN
Sbjct: 304 LELIFRNPAILERNVKITKGDTCQIMFESTQNLFTVCEIFRRYVRRIHRKNDPRDPNFLA 363
Query: 356 TLSRVEAIQK 365
+R I++
Sbjct: 364 ISARCAKIEQ 373
>gi|171680817|ref|XP_001905353.1| hypothetical protein [Podospora anserina S mat+]
gi|170940036|emb|CAP65262.1| unnamed protein product [Podospora anserina S mat+]
Length = 468
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 210/367 (57%), Gaps = 23/367 (6%)
Query: 3 SLAAVLRHPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
+A L HP++L + + K+ R A K+ P E C+ L SRSF+ VIQ+
Sbjct: 6 QIAYFLLHPNELRSIAQWKVWHEPVHRRDASKETPTEKS---CFHFLKLTSRSFSAVIQE 62
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEY 115
L +L +C+FYLVLR LDT+EDD ++ K P+L FH + W F + ++
Sbjct: 63 LNPELLMPICLFYLVLRGLDTIEDDMTLDIKEKEPLLRDFHNIMEQDGWTFDKNGPNEKD 122
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+ L+ F + ++ K Y D I+DIT++MG GMA + V +I +Y+ YC
Sbjct: 123 RELLVHFDDIIFELKKVKKPYYDIIKDITEKMGNGMADYALNAEHNNIGVGTIKEYELYC 182
Query: 170 YYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++LF S + L L+ SMG FLQK NIIRD ED I K R
Sbjct: 183 HYVAGLVGEGLTRLFVESNLANPQLLVRMDLTESMGQFLQKVNIIRDVHEDW--IDK-RR 239
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWPREIWSKYV+ +DL N +KA+QC ++MV NAL H E+CL YM+ +RD ++F F
Sbjct: 240 FWPREIWSKYVDNWDDLFAPANREKALQCSSEMVLNALKHAEECLFYMAGIRDQSVFNFV 299
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPK 345
AIPQ MAI TL L + N +F VK+ +G ++ I+ T N+ V F ++ + K
Sbjct: 300 AIPQSMAIATLDLVFRNPAIFERNVKITKGDACQLMIESTQNLRVVCDVFKKYARRIHKK 359
Query: 346 INKNDPN 352
+ DPN
Sbjct: 360 NDPRDPN 366
>gi|367032202|ref|XP_003665384.1| farnesyl-diphosphate farnesyl transferase [Myceliophthora
thermophila ATCC 42464]
gi|347012655|gb|AEO60139.1| farnesyl-diphosphate farnesyl transferase [Myceliophthora
thermophila ATCC 42464]
Length = 469
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 209/359 (58%), Gaps = 17/359 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWA--FCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP+ L +L+ K+ K+ P + C+ L SRSFA VI++L +L
Sbjct: 11 LLHPNQLRSILQWKVWHDPVHKRDPSKETETERTCFKYLDMTSRSFASVIKELNPELLMP 70
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLMDQFH 123
VC+FYLVLR LDT+EDD +I K P+L FH ++ W F + ++ + L+ F
Sbjct: 71 VCLFYLVLRGLDTIEDDMTIDIKEKEPLLRNFHVYMEQDGWTFDKNGPNEKDRDLLVHFD 130
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVG 177
+V ++ + Y + I+DIT +MG GMA + V +I+DY+ YC+YVAGLVG
Sbjct: 131 NVIVELKKVKRPYYEIIKDITIKMGNGMADYALNAEHNTNGVNTIEDYELYCHYVAGLVG 190
Query: 178 LGLSKLFYAS---GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 234
GL++LF S + L L+ SMG FLQKTNIIRD ED + R FWP+EIWS
Sbjct: 191 EGLTRLFVKSELANPQLLVRTDLTESMGQFLQKTNIIRDVHEDWID---NRRFWPKEIWS 247
Query: 235 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 294
+YV+K +DL EN +KA+QC + MV NAL H ++CL YM+ +RD ++F F AIPQ MAI
Sbjct: 248 QYVDKWDDLFAPENREKALQCSSHMVLNALKHADECLFYMAGVRDQSVFNFVAIPQSMAI 307
Query: 295 GTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
TL L + N E+F VK+ +G ++ ++ T N+ V F + + K + DPN
Sbjct: 308 ATLELVFRNPEIFEKNVKITKGDACQLMLESTQNLRVVCGVFRRYVRRIHQKNDPRDPN 366
>gi|46135731|ref|XP_389557.1| hypothetical protein FG09381.1 [Gibberella zeae PH-1]
Length = 462
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 215/364 (59%), Gaps = 16/364 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQL 58
MG L +L HP L +++ K+ ++ P P C+ L+ SRSFA VIQ+L
Sbjct: 1 MGYLYYLL-HPYQLRSIIQWKVWHDPVHERDPSTESPELQECFRYLNLTSRSFAAVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118
+L + +FYL LR LDT+EDD ++P + K+PIL FH + + W F ++ K L
Sbjct: 60 NHELLVPITLFYLCLRGLDTIEDDMTLPLEKKIPILRNFHTTMNEDGWQFHESQEKDKEL 119
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 172
++ F V T ++ Y + I D+T++MG GMA + E V++I++Y+ YC+YV
Sbjct: 120 LEHFDVVITELKKIKAPYHEIITDMTRKMGNGMADYAENEEMIKNGVQTIEEYELYCHYV 179
Query: 173 AGLVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF S LA SL+ SMG FLQKTNIIRD ED + R ++P
Sbjct: 180 AGLVGEGLTRLFVESELANPKLAERPSLTESMGQFLQKTNIIRDLHEDWQD---GRRWYP 236
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWS++V+K ED+ KA++C++ MV +AL H E+CL YM+ ++D ++F F AIP
Sbjct: 237 KEIWSQHVDKWEDMFNPAQQTKAIECVSHMVLDALKHSEECLFYMAGIKDQSVFNFVAIP 296
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINK 348
+ MAI TL L + N EV + VK+ +G K++ + T N+ V F ++ + K +
Sbjct: 297 EGMAIATLELVFRNPEVLKRNVKITKGDACKIMFECTQNLFTVCEVFKRYTRKIAKKNDP 356
Query: 349 NDPN 352
DPN
Sbjct: 357 RDPN 360
>gi|27764301|emb|CAD60581.1| unnamed protein product [Podospora anserina]
Length = 532
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/367 (40%), Positives = 209/367 (56%), Gaps = 23/367 (6%)
Query: 3 SLAAVLRHPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQ 57
+A L HP++L + + K+ R A K+ P E C+ L SRSF+ VIQ+
Sbjct: 6 QIAYFLLHPNELRSIAQWKVWHEPVHRRDASKETPTEKS---CFHFLKLTSRSFSAVIQE 62
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEY 115
L +L +C+FYLVLR LDT+EDD ++ K P+L FH + W F + ++
Sbjct: 63 LNPELLMPICLFYLVLRGLDTIEDDMTLDIKEKEPLLRDFHNIMEQDGWTFDKNGPNEKD 122
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
+ L+ F + ++ K Y D I+DIT++MG GMA + V +I +Y+ YC
Sbjct: 123 RELLVHFDDIIFELKKVKKPYYDIIKDITEKMGNGMADYALNAEHNNIGVGTIKEYELYC 182
Query: 170 YYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++LF S + L L+ SMG FLQK NIIRD ED + R
Sbjct: 183 HYVAGLVGEGLTRLFVESNLANPQLLVRMDLTESMGQFLQKVNIIRDVHEDWID---KRR 239
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
FWPREIWSKYV+ +DL N +KA+QC ++MV NAL H E+CL YM+ +RD ++F F
Sbjct: 240 FWPREIWSKYVDNWDDLFAPANREKALQCSSEMVLNALKHAEECLFYMAGIRDQSVFNFV 299
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPK 345
AIPQ MAI TL L + N +F VK+ +G ++ I+ T N+ V F ++ + K
Sbjct: 300 AIPQSMAIATLDLVFRNPAIFERNVKITKGDACQLMIESTQNLRVVCDVFKKYARRIHKK 359
Query: 346 INKNDPN 352
+ DPN
Sbjct: 360 NDPRDPN 366
>gi|389624419|ref|XP_003709863.1| squalene synthase [Magnaporthe oryzae 70-15]
gi|351649392|gb|EHA57251.1| squalene synthase [Magnaporthe oryzae 70-15]
gi|440472489|gb|ELQ41347.1| squalene synthetase [Magnaporthe oryzae Y34]
gi|440486337|gb|ELQ66215.1| squalene synthetase [Magnaporthe oryzae P131]
Length = 465
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 210/360 (58%), Gaps = 23/360 (6%)
Query: 10 HPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
HP +L +++ K+ +R K+ P E C+ L SRSFA VI++L +L
Sbjct: 13 HPVELRAIIQWKIWHEPVHTRNPSKERPTETE---CFKYLDLTSRSFAAVIKELNPELLM 69
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQF 122
VCIFYL LR LDT+EDD +IP D K+P+L F + W F+ G E + L+ F
Sbjct: 70 PVCIFYLALRGLDTIEDDMTIPNDKKIPLLRNFADFMDQDGWTFNENGPNERDRELLVHF 129
Query: 123 HHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLV 176
V T + K Y + I DIT +MG GMA ++ K + ++++Y+ YC+YVAGLV
Sbjct: 130 DQVITELKLVKKPYYEIIRDITVKMGNGMADYVLKTENTTNCINTVEEYEMYCHYVAGLV 189
Query: 177 GLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++LF + + L L+ SMG FLQKTNIIRD ED I K R +WPR +W
Sbjct: 190 GEGLTRLFVVAELANPKLLERMDLAESMGQFLQKTNIIRDVHEDY--IDK-RSWWPRSVW 246
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKY + +DL EN +AV C +++V NAL +VEDCL YM+ +R+ ++F F AIPQ MA
Sbjct: 247 SKYAKEYDDLFKPENRQQAVYCCSELVLNALKNVEDCLYYMAGMREQSVFNFVAIPQTMA 306
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNNMTDVYLAFYDFSNILKPKINKNDPN 352
I TL L + N ++F VK+ +G +++ R T N+ V F +++ + K + DPN
Sbjct: 307 IATLELVFQNPKIFERNVKITKGDACRIMLRSTQNLRLVTDLFKEYTRKIHQKNDPRDPN 366
>gi|440638029|gb|ELR07948.1| farnesyl-diphosphate farnesyltransferase [Geomyces destructans
20631-21]
Length = 472
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 194/325 (59%), Gaps = 15/325 (4%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF++VIQ+L +L V +FYL+LR LDTVEDD +IP + K PIL FH
Sbjct: 45 CFVHLENTSRSFSMVIQELNPELLVPVALFYLILRGLDTVEDDMTIPLEEKEPILRDFHN 104
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
+ W+F+ + K L+ F V + ++ YQ I+DIT +MG GMA++
Sbjct: 105 IMEKDGWNFNGNGPDEKDRGLLVDFDVVIMEYKKVKPVYQAIIKDITDKMGNGMAEYANN 164
Query: 156 ----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V +I DY+ YC+YVAGLVG GL++LF SG + L LS SMG FLQKT
Sbjct: 165 AEHNVNGVNTIKDYELYCHYVAGLVGDGLTRLFVESGLANPALLQRPHLSESMGQFLQKT 224
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED+++ R FWP+EIWSK+V K EDL EN A+ C ++MV N+L H +
Sbjct: 225 NIIRDIREDLDD---KRRFWPKEIWSKHVEKFEDLFKPENQTAALACSSEMVLNSLRHAD 281
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
+CL Y++ ++D ++F F AIPQ MAI TL L + N ++F +K+ + ++ I T N
Sbjct: 282 ECLFYLAGIKDQSVFNFTAIPQAMAIATLELVFQNPKIFHQNIKITKSDACELMIQSTQN 341
Query: 328 MTDVYLAFYDFSNILKPKINKNDPN 352
+ V F ++ + K + DPN
Sbjct: 342 LRIVCGVFRTYTRKIAKKNSPTDPN 366
>gi|340931793|gb|EGS19326.1| farnesyl-diphosphate farnesyltransferase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 431
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 201/340 (59%), Gaps = 17/340 (5%)
Query: 3 SLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPH--WAFCYSMLHKVSRSFALVIQQLGT 60
L L HP++L +++ K+ + + P + C+ L+K SRSFA VIQ+L
Sbjct: 6 QLVYFLLHPNELRNIIQWKVWHQPVHARDPSKESETQKQCFYYLNKTSRSFAAVIQELNP 65
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTKEY-KVL 118
+L VC+FYLVLR LDT+EDD +I K P+L +FH + W F G E + L
Sbjct: 66 ELLMPVCLFYLVLRGLDTIEDDMTIDVKKKEPLLRSFHDIIEQDGWTFHENGPNEKDREL 125
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 172
+ F V T ++ Y + I+DITK+MG GMA + V ++ DY+ YC+YV
Sbjct: 126 LVHFDVVITELKKIKPEYYEIIKDITKKMGDGMADYALNAEHNINGVSTVPDYELYCHYV 185
Query: 173 AGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF SG + L+ SMG FLQKTNIIRD ED + R FWP
Sbjct: 186 AGLVGEGLTRLFVKSGLATPKLMDRPELTESMGQFLQKTNIIRDVHEDWLD---KRRFWP 242
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWSKYV+K +DL +N +KA+ C ++MV NAL H E+CL YM+ +RD ++F F AIP
Sbjct: 243 KEIWSKYVDKWDDLFDPKNREKALHCSSEMVLNALKHAEECLFYMAHIRDQSVFNFVAIP 302
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNM 328
Q MAI TL L + N +F VK+ +G ++ I+ T N+
Sbjct: 303 QSMAIATLELVFRNPAIFERNVKITKGDACRLMIESTQNL 342
>gi|310796397|gb|EFQ31858.1| farnesyl-diphosphate farnesyltransferase [Glomerella graminicola
M1.001]
Length = 464
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 211/359 (58%), Gaps = 17/359 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP+ L +++ K+ ++ P +P C+ L+K SRSF+ VIQ+L +L
Sbjct: 7 LLHPNQLRSIIQWKVWHEPVHRRDPSKEDPTLRACFEHLNKTSRSFSAVIQELNPELLVP 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFH 123
VC+FYLVLR LDT+EDD ++ + K P+L F +++ W F+ G E + L+ F
Sbjct: 67 VCLFYLVLRGLDTIEDDMTLSIEEKEPLLREFDQYMVKDGWTFTKNGPNEKDRDLLVHFD 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMA------KFICKEVESIDDYDEYCYYVAGLVG 177
V T ++ K Y D I+DIT +MG GMA F + V +I +Y+ YC+YVAGLVG
Sbjct: 127 DVITELKKIKKPYFDVIKDITIKMGNGMADYAKNAAFNEQGVATIKEYELYCHYVAGLVG 186
Query: 178 LGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 234
GL++LF + L L+ SMG FLQKTNIIRD ED + R FWP++IWS
Sbjct: 187 DGLTRLFVEGNMANPKLLERPELTESMGQFLQKTNIIRDVHEDYLD---KRRFWPKDIWS 243
Query: 235 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 294
K+V+ +DL EN KA++C ++MV NAL H E+CL YM+A++D ++F F AIPQ MAI
Sbjct: 244 KHVDTWDDLFKPENQRKALECSSEMVLNALKHTEECLFYMAAIKDQSVFNFVAIPQSMAI 303
Query: 295 GTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
TL L + N +F +K+ +G +++ + T N+ V F + + K + DPN
Sbjct: 304 ATLELVFRNPAIFNSHIKITKGDACQLMSESTQNLYVVCEVFRRYIRKIHKKNDPRDPN 362
>gi|373839523|gb|AEY76157.1| squalene synthase, partial [Dioscorea zingiberensis]
Length = 132
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/132 (86%), Positives = 126/132 (95%)
Query: 75 ALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 134
ALDTVEDDTSIP DVKVPIL AFH H+YD +WHFSCG K+YKVLMD+FH+VSTAFLELGK
Sbjct: 1 ALDTVEDDTSIPADVKVPILQAFHCHIYDLDWHFSCGAKDYKVLMDKFHYVSTAFLELGK 60
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
GYQ+AI+DIT+RMGAGMAKFICKEVE++DDYDEYC+YVAGLVGLGLSKLFYASG+EDLA
Sbjct: 61 GYQEAIDDITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFYASGSEDLAS 120
Query: 195 DSLSNSMGLFLQ 206
DSLSNSMGLFLQ
Sbjct: 121 DSLSNSMGLFLQ 132
>gi|451852229|gb|EMD65524.1| hypothetical protein COCSADRAFT_35564 [Cochliobolus sativus ND90Pr]
Length = 482
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/369 (39%), Positives = 216/369 (58%), Gaps = 21/369 (5%)
Query: 10 HPDDLYPLLKLKMASRQA-EKQIPPEPH-WAFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP +L +++ K+ E+ EP C+ L++ SRSFA VI +L DL V
Sbjct: 12 HPAELRSIIQWKVWHNPVHERDESKEPESLKRCFHFLNQTSRSFAAVILELHPDLLVPVT 71
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFHHV 125
+FYL+LR LDT+EDD +IP K P+L F + W F+ G E + L+ +F+ V
Sbjct: 72 LFYLILRGLDTIEDDMTIPLAKKEPLLRNFQDILEQDGWTFTENGPNEKDRQLLVEFNVV 131
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE-----VESIDDYDEYCYYVAGLVGLGL 180
F ++ Y+D I+DIT+RMG GMA + V++I +Y+ YC+YVAGLVG G
Sbjct: 132 IEEFKKIKPAYKDIIKDITRRMGNGMADYANNAEFNAGVKTIKEYELYCHYVAGLVGEGC 191
Query: 181 SKLFYASGTEDLA----PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++LF +G + A P+ L SMG LQ+ NI RD ED ++ R FWP+EIWSK+
Sbjct: 192 TRLFVEAGLANAALLKRPE-LMESMGQLLQQVNITRDIREDFDD---GRRFWPKEIWSKH 247
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+ EDL EN +KA++ ++M+ AL +DCL Y++ LR+ ++F FCAIPQ MAI T
Sbjct: 248 VDNFEDLFKPENKEKALKASSEMILTALTRADDCLYYLAGLREQSVFNFCAIPQSMAIAT 307
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
L C+ N ++F+ VK+ +G ++ ++ T N+ V F ++ + K N +DPN K
Sbjct: 308 LEACFQNYDLFQKNVKITKGEACQLMVESTQNLQLVCEVFRRYARKIAKKNNPHDPNFLK 367
Query: 356 ---TLSRVE 361
TL ++E
Sbjct: 368 ISITLGKIE 376
>gi|336368616|gb|EGN96959.1| hypothetical protein SERLA73DRAFT_11603 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381402|gb|EGO22554.1| hypothetical protein SERLADRAFT_341452 [Serpula lacrymans var.
lacrymans S7.9]
Length = 423
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 217/373 (58%), Gaps = 29/373 (7%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQ-----AEKQIPP----EPHWAFCYSMLHKVSRSFALV 54
L +L HP + L++ + Q A+++ P P C+ +L SRSFA V
Sbjct: 3 LTLLLTHPTEFRTLVQFYIFHEQKRDITAQQEHPTSGWDRPTMRRCWELLDLTSRSFAAV 62
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGT 112
I++L DL +CI+YLVLR LDT+EDD +I +VK P+L +FH W+F S
Sbjct: 63 IKELDGDLARIICIYYLVLRGLDTIEDDMTISDEVKQPLLRSFHEKAITPGWNFKDSGPD 122
Query: 113 KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
++ + L+ ++ V L Y+ I DI ++M GMA + K +E++ +Y
Sbjct: 123 EKDRQLLIEYDTVVIETNMLKPEYKAVIMDICQKMENGMADYAHKAATTSTVYLETVAEY 182
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDYLEDINE 220
D YC+YVAGLVG G+++++ A+G E AP L+NSMGL LQKTNIIRD+ ED+++
Sbjct: 183 DLYCHYVAGLVGEGVTRIWSATGKE--APWLCDQLELANSMGLLLQKTNIIRDFREDVDD 240
Query: 221 IPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRD 279
R FWPRE+W+KY +++DL + + + A + MV +AL H D L Y+ L++
Sbjct: 241 R---RFFWPRELWAKYGFEEMKDLYEKGDVEHATWIQSGMVLDALRHATDSLDYLKLLKN 297
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFS 339
+IF FCAIP MA+ TL+LC+ N E+F+ +K+R+ AK+I R+ N +V L F D++
Sbjct: 298 QSIFIFCAIPVTMAMATLSLCFMNPEMFQRNIKIRKAEAAKLIMRSTNPREVALVFRDYA 357
Query: 340 NILKPKINKNDPN 352
+ K DPN
Sbjct: 358 RKIHSKAKPQDPN 370
>gi|431971072|gb|AGA95493.1| squalene synthase [Inonotus obliquus]
Length = 491
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 193/327 (59%), Gaps = 17/327 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L + SRSF+ VI++L DL VC+FYLVLR LDT+EDD +I +VK P+L F +
Sbjct: 52 CWYFLDRTSRSFSSVIKELDGDLARVVCLFYLVLRGLDTIEDDMTITDEVKQPLLRNFSK 111
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H W F+ K L+ +F V L L Y+D I DI +M GMA + +
Sbjct: 112 HCSTPGWSFAGNGPHEKDRQLLVEFDCVVQELLLLPSSYRDVILDICDKMAQGMADYAHQ 171
Query: 158 E-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPDSL--SNSMGLFLQK 207
+ S++D D YC+YVAGLVG GLS+LF ASG E D L SNSMGL LQK
Sbjct: 172 AYKAGTLGLGSMEDLDLYCHYVAGLVGEGLSRLFSASGKEVPWLGDQLMLSNSMGLLLQK 231
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVN--KLEDLKYEENSDKAVQCLNDMVTNALM 265
TNI+RD+ ED+N+ R+FWPR IW + +++ EN +A+ L+ M +AL
Sbjct: 232 TNILRDFREDVND---GRLFWPRAIWGEQFGFADPKEMYRPENEKRALWALSAMTLDALR 288
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H D L+Y++ L+ ++F FCAIPQ MA+ TLALC+ N VF VK+R+ AK+I R+
Sbjct: 289 HAVDSLEYIALLKTQSVFNFCAIPQTMAMATLALCFMNPAVFHRNVKIRKAAAAKLIMRS 348
Query: 326 NNMTDVYLAFYDFSNILKPKINKNDPN 352
N DV F +++ + K +DP+
Sbjct: 349 TNPRDVAYIFREYARGIHAKAVPSDPS 375
>gi|367055875|gb|AEX09819.1| squalene synthase [Inonotus obliquus]
Length = 491
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 193/327 (59%), Gaps = 17/327 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L + SRSF+ VI++L DL VC+FYLVLR LDT+EDD +I +VK P+L F +
Sbjct: 52 CWYFLDRTSRSFSSVIKELDGDLARVVCLFYLVLRGLDTIEDDMTITDEVKQPLLRNFSK 111
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H W F+ K L+ +F V L L Y+D I DI +M GMA + +
Sbjct: 112 HCSTPGWSFAGNGPHEKDRQLLVEFDCVVQELLLLPSSYRDVILDICDKMAQGMADYAHQ 171
Query: 158 E-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPDSL--SNSMGLFLQK 207
+ S++D D YC+YVAGLVG GLS+LF ASG E D L SNSMGL LQK
Sbjct: 172 AYKAGTLGLGSMEDLDLYCHYVAGLVGEGLSRLFSASGKEVPWLGDQLMLSNSMGLLLQK 231
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVN--KLEDLKYEENSDKAVQCLNDMVTNALM 265
TNI+RD+ ED+N+ R+FWPR IW + +++ EN +A+ L+ M +AL
Sbjct: 232 TNILRDFREDVND---GRLFWPRAIWGEQFGFADPKEMYRPENEKRALWALSAMTLDALR 288
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H D L+Y++ L+ ++F FCAIPQ MA+ TLALC+ N VF VK+R+ AK+I R+
Sbjct: 289 HAVDSLEYIALLKTQSVFNFCAIPQTMAMATLALCFMNPAVFHRNVKIRKAAAAKLIMRS 348
Query: 326 NNMTDVYLAFYDFSNILKPKINKNDPN 352
N DV F +++ + K +DP+
Sbjct: 349 TNPRDVAYIFREYARGIHAKAVPSDPS 375
>gi|342883548|gb|EGU84011.1| hypothetical protein FOXB_05431 [Fusarium oxysporum Fo5176]
Length = 462
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 208/357 (58%), Gaps = 15/357 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP L +++ K+ ++ P P C+ L SRSFA VIQ+L +L
Sbjct: 7 LFHPYQLRSIIQWKVWHDPVHQRDPSTESPELKECFRYLDMTSRSFAAVIQELNHELLVP 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
+ +FYL LR LDT+EDD +IP D KVP+L FH + + W F ++ K L++ F V
Sbjct: 67 ITLFYLCLRGLDTIEDDMTIPLDKKVPLLRNFHITMEEDGWQFHESQEKDKELLEHFDVV 126
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGLG 179
++ Y I+D+T++MG GMA + E V++I++Y+ YC+YVAGLVG G
Sbjct: 127 VAELKKIKAPYYQIIKDMTRKMGNGMADYAQNEEMIKNGVQTIEEYELYCHYVAGLVGEG 186
Query: 180 LSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF S LA SL+ SMG FLQKTNIIRD ED + R ++P+EIWS++
Sbjct: 187 LTRLFVESELANPKLAERPSLTESMGQFLQKTNIIRDIHEDWQD---GRRWYPKEIWSQH 243
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V K ED+ KA++C++ MV +AL H E+CL YM+ ++D ++F F AIPQ MAI T
Sbjct: 244 VEKWEDMFDPSQQTKALECVSAMVLDALKHSEECLFYMAGIKDQSVFNFVAIPQGMAIAT 303
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
L L + N EV + VK+ +G K++ + T N+ V F ++ + K + DPN
Sbjct: 304 LELVFRNPEVLKRNVKITKGDACKIMFECTQNLYTVCEVFKRYARQIAKKNDPRDPN 360
>gi|403413889|emb|CCM00589.1| predicted protein [Fibroporia radiculosa]
Length = 494
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 216/401 (53%), Gaps = 37/401 (9%)
Query: 1 MGSLAAV---LRHPDDLYPLLKLKMASRQAEKQIPPEPH----W-----AFCYSMLHKVS 48
MG+L+ + L HP + L++ K+ P H W C+ L S
Sbjct: 1 MGALSMLVLLLTHPVEFRTLVQYKLWHEPNRDLTAPSEHAHSGWNRKSMRRCWEFLDLTS 60
Query: 49 RSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF 108
RSFA VI+++ DL A+C+FYLVLRALDT+EDD ++P + K P+L FH++ W F
Sbjct: 61 RSFAAVIKEVEGDLARAICLFYLVLRALDTIEDDMTLPDEKKQPVLRNFHKYAVTPGWTF 120
Query: 109 S-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------V 159
+ G E + L+ ++ VS L K Y D I +I ++M GMA + K V
Sbjct: 121 TENGPNEKDRQLLVEYDVVSEELNLLDKRYLDVILNIAEKMETGMADYAHKAATTGEIYV 180
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLE 216
E + DY+ YC+YVAGLVG GLS+LF ASG E L L+NSMGL LQKTNIIRD+ E
Sbjct: 181 EKVSDYNLYCHYVAGLVGEGLSQLFSASGKEVPWLGEQLELANSMGLMLQKTNIIRDFRE 240
Query: 217 DINEIPKCRMFWPREIWS-----KYVNKLEDLKYEE-----NSDKAVQCLNDMVTNALMH 266
D+++ R FWPREIW K V++ E+ N +A+ + MV + L H
Sbjct: 241 DMDDR---RYFWPREIWGSEALGKAVDQPAFTNVEQMCDPINQRQALWVQSAMVADVLGH 297
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTN 326
D L Y+ L+ +F FCAIPQ MAI TL LC+ N E+F+ +K+RR A +I R+
Sbjct: 298 AVDSLDYLRLLKQQTVFNFCAIPQTMAISTLCLCFMNYEMFQKHIKIRRAEAASLIMRST 357
Query: 327 NMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
N DV F D++ + K DP+ K I + C
Sbjct: 358 NPRDVAYIFRDYARKIHRKATPEDPSYIKISVACAKIDQWC 398
>gi|358387781|gb|EHK25375.1| hypothetical protein TRIVIDRAFT_81989 [Trichoderma virens Gv29-8]
Length = 464
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 221/371 (59%), Gaps = 17/371 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP L +L+ K+ ++ P + C+ L+ SRSF+ VIQ+L +L
Sbjct: 7 LMHPGQLRSILQWKLWHDPVNRRDPSTECATLSECFRFLNLTSRSFSAVIQELNHELLVP 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
+ +FYLVLR LDT+EDD +IP KVP+L FH + W + ++ + L+++F V
Sbjct: 67 ITLFYLVLRGLDTIEDDMTIPLSTKVPMLREFHVTMEQDGWQYHESKEKDRELLEKFDCV 126
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYVAGLVGLG 179
T ++ K Y + I+D+T +MG GMA + I V++I++Y+ YC+YVAGLVG G
Sbjct: 127 ITELKKIKKPYYEIIKDMTIKMGNGMADYAQNTYMIENGVQTIEEYELYCHYVAGLVGEG 186
Query: 180 LSKLFYASGTED--LA--PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
L++L AS + LA P+ L+ SMG FLQKTNIIRD ED + R ++P+EIWSK
Sbjct: 187 LTRLLVASNLANPKLADRPE-LTESMGQFLQKTNIIRDIHEDWVD---GRRWYPKEIWSK 242
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
+V++ EDL ++ +AV+C++ MV +AL HVE+CL YM+ +RD + F F AIPQ MAI
Sbjct: 243 HVDRWEDLFDAKHRTQAVECISAMVLDALKHVEECLFYMAGMRDQSAFNFVAIPQGMAIA 302
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNAT 354
TL LC+ N V VK+ +G ++ ++ T N+ + F ++ ++ K + DPN
Sbjct: 303 TLELCFRNPLVLERNVKITKGDACQIMLESTQNLEVLCEVFRRYARRIQKKNDPRDPNYL 362
Query: 355 KTLSRVEAIQK 365
S+ I++
Sbjct: 363 AISSQCAKIEQ 373
>gi|408395578|gb|EKJ74757.1| hypothetical protein FPSE_05092 [Fusarium pseudograminearum CS3096]
Length = 462
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 214/364 (58%), Gaps = 16/364 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQL 58
MG L +L HP L +++ K+ ++ P P C+ L+ SRSFA VIQ+L
Sbjct: 1 MGYLYYLL-HPYQLRSIIQWKVWHDPVHERDPSTESPELQECFRYLNLTSRSFAAVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118
+L + +FYL LR LDT+EDD ++P + K+P+L FH + + W F ++ K L
Sbjct: 60 NHELLVPITLFYLCLRGLDTIEDDMTLPLEKKIPLLRNFHTTMNEDGWQFHESQEKDKEL 119
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYV 172
++ F V T ++ Y + I D+T +MG GMA + E V++I++Y+ YC+YV
Sbjct: 120 LEHFDVVITELKKIKAPYHEIITDMTHKMGNGMADYAENEEMIKNGVQTIEEYELYCHYV 179
Query: 173 AGLVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF S LA SL+ SMG FLQKTNIIRD ED + R ++P
Sbjct: 180 AGLVGEGLTRLFVESELANPKLAERPSLTESMGQFLQKTNIIRDLHEDWQD---GRRWYP 236
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWS++V+K ED+ KA++C++ MV +AL H E+CL YM+ ++D ++F F AIP
Sbjct: 237 KEIWSQHVDKWEDMFNPAQQTKAIECVSHMVLDALKHSEECLFYMAGIKDQSVFNFVAIP 296
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINK 348
+ MAI TL L + N EV + VK+ +G K++ + T N+ V F ++ + K +
Sbjct: 297 EGMAIATLELVFRNPEVLKRNVKITKGDACKIMFECTQNLFTVCEVFKRYTRKIAKKNDP 356
Query: 349 NDPN 352
DPN
Sbjct: 357 RDPN 360
>gi|154322252|ref|XP_001560441.1| hypothetical protein BC1G_01273 [Botryotinia fuckeliana B05.10]
gi|347833322|emb|CCD49019.1| similar to Farnesyl-diphosphate farnesyl transferase (squalene
synthase) [Botryotinia fuckeliana]
Length = 482
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP+ L +L+ K+ + P + + C+ L SRSF+ VIQ+L +L V
Sbjct: 13 HPNQLRAILQWKLWHDPVHTRDPSKEPQSLKDCFKYLELTSRSFSSVIQELNPELLVPVA 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFHHV 125
+FYLVLR LDT+EDD +IP K P+L AF + + W F+ G E + L+ F V
Sbjct: 73 LFYLVLRGLDTIEDDMTIPLGKKEPLLRAFDSIIEEDGWSFNENGPNEKDRELLVHFDCV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCYYVAGLVGLG 179
T F + YQ I+DITK+MG GMA + V +I DY+ YC+YVAGLVG G
Sbjct: 133 ITEFKKCKPAYQVIIKDITKKMGNGMADYANNAEHNINGVNTIKDYELYCHYVAGLVGDG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF + + L LS SMG FLQKTNIIRD ED ++ R FWP+EIWSK+
Sbjct: 193 LTRLFIEAKFANPALLGKPELSESMGQFLQKTNIIRDIREDFDD---KRRFWPKEIWSKH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+K +DL +N A+ C ++MV N+L H ++CL YM+ ++D ++F F AIPQ MAI T
Sbjct: 250 VDKFDDLFDPKNRQIALNCSSEMVLNSLRHADECLFYMAGIKDQSVFNFVAIPQAMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
L L + N +F VK+ +G ++ ++ + N+ V F ++ + K + DPN K
Sbjct: 310 LELVFQNPAIFEKNVKITKGDACQLMMESSQNLRTVCDIFQRYARKINKKNSPKDPNFLK 369
>gi|449548156|gb|EMD39123.1| hypothetical protein CERSUDRAFT_152093 [Ceriporiopsis subvermispora
B]
Length = 498
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 205/350 (58%), Gaps = 25/350 (7%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF+ VI+++ DL VC+FYLVLR LDT+EDD ++P + K P+L AFH
Sbjct: 52 CWDFLDLTSRSFSGVIKEVEGDLARVVCLFYLVLRGLDTIEDDMTLPDEKKQPLLRAFHD 111
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ +W F+ + K L+ +F VS L + Y++ I DITK+M GMA + K
Sbjct: 112 YAVMPDWTFTENGPDEKDRQLLVEFDVVSHEVNLLDEKYREIIIDITKKMETGMADYAHK 171
Query: 158 E-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQK 207
+E++DDY+ YC+YVAGLVG GL++L+ ASG E L L+NSMG+ LQK
Sbjct: 172 AATSGEVYLETVDDYNLYCHYVAGLVGEGLTRLWSASGKEASWLGEQLELANSMGIMLQK 231
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYV----------NKLEDLKYEENSDKAVQCLN 257
TNIIRDY ED ++ R FWPREIW + + +++++ N +A+ L+
Sbjct: 232 TNIIRDYREDADQ---RRYFWPREIWGRELYGKACGRSAFKEMKEMYLPGNEQQALWALS 288
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGL 317
MV + L H D L Y+ L++ ++F FCAIPQ MA+ TL+LC+ N ++F+ +K+R+
Sbjct: 289 GMVVDVLGHAVDSLDYLRLLKNQSVFNFCAIPQTMAMATLSLCFMNYDMFQKHIKIRKAE 348
Query: 318 TAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
A +I R+ N DV F D++ + K DPN + I++ C
Sbjct: 349 AASLIMRSTNPRDVAYMFRDYARKIHAKAVPEDPNFMQISIACGKIEQWC 398
>gi|71020581|ref|XP_760521.1| farnesyl-diphosphate farnesyltransferase [Ustilago maydis 521]
gi|119370493|sp|Q92459.2|FDFT_USTMA RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|46100416|gb|EAK85649.1| FDFT_USTMA Farnesyl-diphosphate farnesyltransferase (Squalene
synthetase) (SQS) (SS) (FPP:FPP farnesyltransferase)
[Ustilago maydis 521]
Length = 572
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 202/356 (56%), Gaps = 31/356 (8%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L +L +C+FYLVLRALDTVEDD +IP K+P+L+ F++
Sbjct: 50 CWGFLDLTSRSFAAVIKELKGELSRVICLFYLVLRALDTVEDDMTIPAQRKIPLLVNFYK 109
Query: 100 HVYDREWHFS-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
++ W+F+ G E + L+ +F V + L GY+ I DIT +MGAGMA +I
Sbjct: 110 YLEQPGWNFTESGPNEKDRQLLVEFDKVIAEYQLLDVGYKTVISDITAKMGAGMASYIEL 169
Query: 156 ----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKT 208
+V +D YC++VAGLVG GLS+LF S E LSN MGLFLQKT
Sbjct: 170 SAKGPLKVAMWKHFDLYCHFVAGLVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKT 229
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE----------DLKY-------EENSDK 251
NIIRDY ED E R FWP++ W K E ++K E +
Sbjct: 230 NIIRDYAEDCEE---GRYFWPQQCWGDDFAKFESQPDVAKGIIEIKPGHFRPADNELGQR 286
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVV 311
++ L+ M+ +A+ H L Y++ L++ ++F FCAIPQ+MAI TL L +NN +VF+ V
Sbjct: 287 SMYVLSSMLLDAMSHATHALDYLALLKEQSVFNFCAIPQVMAIATLELMFNNPDVFKKNV 346
Query: 312 KMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
K+R+G+ +I R N DV F +S + +++ DPN T+ + I++ C
Sbjct: 347 KIRKGVAVGLILRAVNPRDVAYTFLHYSRKMHARLSPADPNFTRWSVELARIEQWC 402
>gi|1546773|emb|CAA68054.1| squalene synthase [Ustilago maydis]
Length = 572
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 202/356 (56%), Gaps = 31/356 (8%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L D+ +C+FYLVLRALDTVEDD +IP K+P+L+ F++
Sbjct: 50 CWGFLDLTSRSFAAVIKELKGDVSRVICLFYLVLRALDTVEDDMTIPAQRKIPLLVNFYK 109
Query: 100 HVYDREWHFS-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
++ W+F+ G E + L+ +F V + L GY+ I DIT +MGAGMA +I
Sbjct: 110 YLEQPGWNFTESGPNEKDRQLLVEFDKVIAEYQLLDVGYKTVISDITAKMGAGMASYIEL 169
Query: 156 ----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKT 208
+V +D YC++VAGLVG GLS+LF S E LSN MGLFLQKT
Sbjct: 170 SAKGPLKVAMWKHFDLYCHFVAGLVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKT 229
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE----------DLKY-------EENSDK 251
NIIRDY ED E R FWP++ W K E ++K E +
Sbjct: 230 NIIRDYAEDCEE---GRYFWPQQCWGDDFAKFESQPDVAKGIIEIKPGHFRPADNELGQR 286
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVV 311
++ L+ M+ +A+ H L Y++ L++ ++F FCAIPQ+MAI TL L +NN +VF+ V
Sbjct: 287 SMYVLSSMLLDAMSHATHALDYLALLKEQSVFNFCAIPQVMAIATLELMFNNPDVFKKNV 346
Query: 312 KMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
K+R+G+ +I R N DV F +S + +++ DPN T+ + I++ C
Sbjct: 347 KIRKGVAVGLILRAVNPRDVAYTFLHYSRKMHARLSPADPNFTRWSVELARIEQWC 402
>gi|239909605|gb|ABX64425.2| squalene synthase [Fusarium fujikuroi]
Length = 462
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 209/357 (58%), Gaps = 15/357 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP L +++ K+ ++ P P C+ L SRSFA VIQ+L +L
Sbjct: 7 LFHPYQLRSIIQWKVWHDPVHQRDPSTESPELKECFRYLDMTSRSFAAVIQELNHELLVP 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
+ +FYL LR LDT+EDD +IP D KVP+L FH + + W F ++ K L++ F V
Sbjct: 67 ITLFYLCLRGLDTIEDDMTIPLDKKVPLLRNFHITMEEDGWQFHESQEKDKELLEHFDVV 126
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGLG 179
T ++ Y I+++T++MG GMA + E V++I++Y+ YC+YVAGLVG G
Sbjct: 127 VTELKKIKAPYYQIIQEMTRKMGNGMADYAQNEEMIKNGVQTIEEYELYCHYVAGLVGEG 186
Query: 180 LSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF S LA SL+ SM FLQKTNIIRD ED + R ++P+EIWS++
Sbjct: 187 LTRLFVESELANPKLAERPSLTESMAQFLQKTNIIRDIHEDWQD---GRRWYPKEIWSQH 243
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V+K ED+ KA++C++ MV +AL H E+CL YM+ ++D ++F F AIPQ MAI T
Sbjct: 244 VDKWEDMFDPSQQTKALECVSAMVLDALKHSEECLFYMAGIKDQSVFNFVAIPQGMAIAT 303
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
L L + N EV + VK+ +G K++ + T N+ V F ++ + K + DPN
Sbjct: 304 LELVFRNPEVLKRNVKITKGDACKIMFECTQNLYTVCEVFKRYARQIAKKNDPRDPN 360
>gi|380495179|emb|CCF32592.1| squalene synthase [Colletotrichum higginsianum]
Length = 463
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 211/372 (56%), Gaps = 17/372 (4%)
Query: 8 LRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
L HP L +++ K+ ++ P +P C+ L+K SRSF+ VIQ+L +L
Sbjct: 7 LLHPSQLRAIIQWKVWHDPVHRRDPSKEDPTLTACFEHLNKTSRSFSAVIQELNPELLVP 66
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFH 123
VC+FYLVLR LDT+EDD +I K P+L F +++ W F+ G E + L+ F
Sbjct: 67 VCLFYLVLRGLDTIEDDMTIDIKEKEPLLRQFDQYMEQDGWTFTKNGPNEKDRDLLVHFD 126
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMA------KFICKEVESIDDYDEYCYYVAGLVG 177
V T ++ K Y D I+DIT +MG GMA F V ++ +Y+ YC+YVAGLVG
Sbjct: 127 DVITEMKKIKKPYYDIIKDITIKMGNGMADYAKNAAFNENGVATVKEYELYCHYVAGLVG 186
Query: 178 LGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 234
GL++LF + L L+ SMG FLQKTNIIRD ED + R FWP+EIW
Sbjct: 187 DGLTRLFVEGNMANPKLLERPELTESMGQFLQKTNIIRDVHEDYLD---KRRFWPKEIWG 243
Query: 235 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 294
K+V+ +DL EN KA+ C ++MV NAL H E+CL YM+ ++D ++F F AIPQ MAI
Sbjct: 244 KHVDTWDDLFKPENQRKALDCSSEMVLNALKHAEECLFYMAGIKDQSVFNFVAIPQSMAI 303
Query: 295 GTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKNDPNA 353
TL L + N +F +K+ +G +++ D T N+ V F ++ + K + DPN
Sbjct: 304 ATLELVFRNPAIFSSHIKITKGDACQLMSDSTQNLFVVCDVFRKYTRRIHKKNDPRDPNF 363
Query: 354 TKTLSRVEAIQK 365
+ + I++
Sbjct: 364 VQISVQCAKIEQ 375
>gi|443897043|dbj|GAC74385.1| squalene synthetase [Pseudozyma antarctica T-34]
Length = 574
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 220/407 (54%), Gaps = 43/407 (10%)
Query: 1 MGSLAAVL---RHPDDLYPLLKLKMASRQAE--KQIPPEPHW-----AFCYSMLHKVSRS 50
MG L VL HP +L ++ K+ K P E W C++ L SRS
Sbjct: 1 MGLLQYVLLGITHPSELRAMIGYKVWRDPLNDIKANPVESGWDRERMRQCWTFLDLTSRS 60
Query: 51 FALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS- 109
FA VI++L +L +C+FYLVLRALDT+EDD +IP D KVP+L+ F++++ W+F+
Sbjct: 61 FAAVIKELKGELSRVICLFYLVLRALDTIEDDMTIPADKKVPLLVDFYKYLEQPGWNFTE 120
Query: 110 CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESI 162
G E + L+ +F V + L +GY+ I DIT +MGAGMA +I V +
Sbjct: 121 SGPNEKDRQLLVEFDKVIAEYQLLDQGYRTVISDITAKMGAGMASYIELSGKAPLSVSTW 180
Query: 163 DDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDIN 219
+D YC++VAGLVG GLS+LF S E LSN MGLFLQKTNIIRDY ED
Sbjct: 181 KHFDLYCHFVAGLVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKTNIIRDYAEDCQ 240
Query: 220 EIPKCRMFWPREIWSK---------------YVNKLEDLKYE----ENSDKAVQCLNDMV 260
E R FWP++ W+ K KY+ E +++ L+ M+
Sbjct: 241 E---GRFFWPKQCWADDYARFASQPDVASGIVETKPGSGKYKPADSELGRRSMYVLSSML 297
Query: 261 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 320
+A+ H L Y++ L++ ++F FCAIPQ+MAI T+ L +NN +VF+ +K+R+G+
Sbjct: 298 LDAMSHATSALDYLALLKEQSVFNFCAIPQVMAIATIELMFNNPDVFKKNIKIRKGVAVG 357
Query: 321 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
+I + N DV F ++ + ++ DPN + + I++ C
Sbjct: 358 LILKAVNPRDVAYTFLAYARKIHARLTPADPNFARWCVELARIEQWC 404
>gi|448523563|ref|XP_003868895.1| GTP-binding protein, partial [Candida orthopsilosis Co 90-125]
gi|380353235|emb|CCG25991.1| GTP-binding protein, partial [Candida orthopsilosis]
Length = 302
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 194/304 (63%), Gaps = 19/304 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQL 58
MG +L HPD+L +++L RQ+ P P CY +L+ SRSFA VI++L
Sbjct: 1 MGKFLQLLLHPDELKSVIQLT-GFRQSLHPAPASQSPALKRCYELLNLTSRSFAAVIEEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC-GTKEY-K 116
+LR+A+ IFYLVLRALDT+EDD SI ++KVP+L F+ + ++W F G +E +
Sbjct: 60 HPELRDAIMIFYLVLRALDTIEDDMSIDAEIKVPLLRTFYEKLDTKDWTFDGNGPREKDR 119
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCY 170
+++ +F + + EL YQ+ ++DIT++MG GMA +I E VE+I+DY+ YC+
Sbjct: 120 IVLVEFDQILDIYHELKSQYQEIVKDITRKMGNGMADYILDENFNLNGVETIEDYNLYCH 179
Query: 171 YVAGLVGLGLSKLFYASGTED--LAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
YVAGLVG GL+KL + D L D+ SNSMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 YVAGLVGEGLTKLMVLAKFSDDSLVEDNFEKSNSMGLFLQKTNIIRDYHEDLLD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSD-KAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRF 285
FWP+EIWSKY +L ++ + + + C+ND+V NAL HV L+++S ++D + F F
Sbjct: 237 FWPKEIWSKYTPELPQFHKNKSMEFEGLSCINDLVLNALGHVRHVLEFLSLVKDPSTFSF 296
Query: 286 CAIP 289
CAIP
Sbjct: 297 CAIP 300
>gi|452839583|gb|EME41522.1| squalene synthetase-like protein [Dothistroma septosporum NZE10]
Length = 407
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 217/381 (56%), Gaps = 21/381 (5%)
Query: 3 SLAAVLRHPDDLYPLLKLKMAS----RQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQL 58
S++ L HP +L +L+ K+ R E C+ L SRSF VIQQL
Sbjct: 4 SMSHYLTHPAELRAMLQWKLLHAPIYRSDETPGTQTHDLKECWRFLALTSRSFVAVIQQL 63
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG---TKEY 115
+L +CIFYL LR+LDT+EDD ++P VK P+L F +H+ D W F K+
Sbjct: 64 HPELLMPMCIFYLALRSLDTIEDDMTLPIAVKEPLLRDFDQHLDDETWTFDGSGPDEKDR 123
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE----VESIDDYDEYCYY 171
+VL+ +F V+ + +L + Y+ I DITKRMGAGMA + V++I DY+ YC+Y
Sbjct: 124 EVLV-KFDCVAREYNKLKEEYRRIIADITKRMGAGMADYAVTADTVGVKTIADYELYCHY 182
Query: 172 VAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW 228
VAGLVG G++++F + + + L+ +M LQ+TNIIRD ED + R FW
Sbjct: 183 VAGLVGEGVTRMFVLASLAEPRVMEKPELAEAMAQLLQQTNIIRDVHEDHMD---NRHFW 239
Query: 229 PREIWSKYVNKLEDL--KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
P E+WSK+V+K DL K KA++C+++MV AL DCL YM+ +R+ ++F F
Sbjct: 240 PTEVWSKHVDKFSDLFQKDPPGQRKALECMSEMVLMALEKAPDCLSYMANVREQSVFNFV 299
Query: 287 AIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK-VIDRTNNMTDVYLAFYDFSNILKPK 345
AIPQ MA+ TL LC+ N VF +K+ RG+ + +ID ++ V AF ++ ++ K
Sbjct: 300 AIPQTMAMATLELCFQNPSVFDRNIKITRGVACQLLIDSVKDLRYVGRAFSRYAAKIQKK 359
Query: 346 INKNDPNATKTLSRVEAIQKA 366
DPN +K + AI ++
Sbjct: 360 NRPEDPNYSKIDAACTAITQS 380
>gi|397627074|gb|EJK68341.1| hypothetical protein THAOC_10485 [Thalassiosira oceanica]
Length = 713
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/298 (48%), Positives = 185/298 (62%), Gaps = 21/298 (7%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD-TSIPT-DVKVPILIA 96
FC +L KVSRSFA VI+QL + L V IFYLVLRALDT+EDD T P+ + KV L+A
Sbjct: 368 FCDDILCKVSRSFAAVIRQLPSQLLVDVLIFYLVLRALDTIEDDMTYFPSNEEKVKSLLA 427
Query: 97 FHR-HVYDREWHF-SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF 154
FH+ + D W CG + + L+++F + + L +G + I DIT RM GMA+F
Sbjct: 428 FHKTALVDPTWTMMGCGEGDERRLLEEFPKCHSVYAALPEGSRRVISDITLRMATGMAEF 487
Query: 155 ICKEVES----IDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS---LSNSMGLFLQK 207
+ K++ + Y+ YC++VAGLVG GLS+LF +S E A LS+ MGLFLQK
Sbjct: 488 VDKDLGQGTVDVAQYNRYCHFVAGLVGEGLSRLFASSELERSALAGELHLSDQMGLFLQK 547
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY------EENSDKAVQCLNDMVT 261
TNIIRDYLED + R FWP+ IW KY + DL Y EE + CLND+VT
Sbjct: 548 TNIIRDYLEDYVD---GRAFWPQSIWKKY-SAGGDLGYFANPATEEAKKAGLCCLNDLVT 603
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTA 319
+AL DCL Y+S LR +FRFCAIPQ+MAI TL CY+N +VF GVVK R A
Sbjct: 604 DALELAPDCLAYLSKLRCAEVFRFCAIPQVMAIATLDRCYHNADVFTGVVKYGRACRA 661
>gi|346319782|gb|EGX89383.1| squalene synthetase [Cordyceps militaris CM01]
Length = 466
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 217/377 (57%), Gaps = 16/377 (4%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQL 58
MG+L L HP+ L +++ K+ K+ + + L+ SRSF++VIQ+L
Sbjct: 1 MGALY-YLMHPNQLRSIIQWKLWHEPVHKRDTSKESETLKESFRYLNMTSRSFSMVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118
+L V +FYLVLR LDT+EDD +IP D K P+L FH + W F ++ L
Sbjct: 60 NPELLVPVALFYLVLRGLDTIEDDMTIPLDTKTPLLRNFHETMEVDGWQFHESKEKDAEL 119
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF------ICKEVESIDDYDEYCYYV 172
++ F V +L Y + I+D+T++MG GMA + I +++I+DY+ YC+YV
Sbjct: 120 LEHFDVVIAELKKLKPQYYEIIKDLTRKMGNGMADYAADTDKIENGLQTIEDYELYCHYV 179
Query: 173 AGLVGLGLSKLFYAS--GTEDLAP-DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWP 229
AGLVG GL++LF S LA +L+ SMG FLQKTNIIRD ED + R ++P
Sbjct: 180 AGLVGEGLTRLFVTSELANPKLAERPTLTESMGQFLQKTNIIRDIHEDWVD---GRRWYP 236
Query: 230 REIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIP 289
+EIWSK+V+K +DL ++A+ C+++MV +AL HVE+CL YM+ +RD + F F AIP
Sbjct: 237 KEIWSKHVDKWDDLFELSKREQALNCISEMVLDALKHVEECLFYMAGMRDQSCFNFVAIP 296
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINK 348
Q MAI TL L + N + VK+ +G ++ ++ T N+ V F ++ + K +
Sbjct: 297 QTMAIATLELIFRNPAILERNVKITKGDACQIMLESTQNLFTVCEVFRNYIRRIHKKNDP 356
Query: 349 NDPNATKTLSRVEAIQK 365
DPN +R I++
Sbjct: 357 RDPNFLAISARCAKIEQ 373
>gi|164657227|ref|XP_001729740.1| hypothetical protein MGL_3284 [Malassezia globosa CBS 7966]
gi|159103633|gb|EDP42526.1| hypothetical protein MGL_3284 [Malassezia globosa CBS 7966]
Length = 392
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 210/389 (53%), Gaps = 40/389 (10%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAE--KQIPPEPHW-----AFCYSMLHKVSRSFAL 53
M L + HP +L L+ + K+ P + W C+S L SRSFA
Sbjct: 1 MEYLKLAVAHPSELRSLITYNVWRDPVHDFKRNPKDSGWDRERMRECWSFLDATSRSFAA 60
Query: 54 VIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGT 112
VI++L +L +CIFYLVLR LDTVEDD ++ DVK+P+L+ FH+ + + W+F+ G
Sbjct: 61 VIKELKGELSRVICIFYLVLRGLDTVEDDMTLKPDVKIPLLLDFHKKLSEPGWNFTGSGP 120
Query: 113 KEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-------CKEVESIDD 164
E + L+ +F V + L +G + I DI RMGAGMA +I +E D
Sbjct: 121 NEKDRQLLVEFDKVIAEYQMLNEGCRFVIADICARMGAGMASYIELGDSPNGLTMEGWRD 180
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEI 221
YD YC++VAGLVG GLS LF + E SLSN MGLFLQKTNIIRDY ED E
Sbjct: 181 YDLYCHFVAGLVGEGLSGLFVQTKIEKPLIGLQLSLSNHMGLFLQKTNIIRDYAEDCRE- 239
Query: 222 PKCRMFWPREIWSK---YVNKLE-------------DLKYEENSD--KAVQCLNDMVTNA 263
R FWP+E W + + E K+ + + KA + L+ M+ +A
Sbjct: 240 --GRSFWPKECWGSGGVFARQTEVQRGVVETYPGSNSYKFTDTVEGRKAREVLSTMLLDA 297
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVID 323
+ HV L+Y+ LRD ++F FCA PQ+MAI TL + +N V++ VK+R+ L ++I
Sbjct: 298 VSHVTSSLEYLILLRDQSVFNFCATPQVMAIATLEVLVDNANVYKKNVKIRKSLAVRLIL 357
Query: 324 RTNNMTDVYLAFYDFSNILKPKINKNDPN 352
R+ N DV F D + K+ +DPN
Sbjct: 358 RSTNPRDVAGIFLDVGRSIHKKLRADDPN 386
>gi|85094080|ref|XP_959817.1| squalene synthetase [Neurospora crassa OR74A]
gi|51701416|sp|Q7S4Z6.1|FDFT_NEUCR RecName: Full=Probable squalene synthase; Short=SQS; Short=SS;
AltName: Full=FPP:FPP farnesyltransferase; AltName:
Full=Farnesyl-diphosphate farnesyltransferase
gi|28921272|gb|EAA30581.1| squalene synthetase [Neurospora crassa OR74A]
Length = 481
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 205/362 (56%), Gaps = 17/362 (4%)
Query: 5 AAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWA--FCYSMLHKVSRSFALVIQQLGTDL 62
A L HP+ L +++ K+ ++ P + C+ L SRSF+ VIQ+L +L
Sbjct: 8 AYFLLHPNQLRSIVQWKVWHEPVHRRDPSKETETEKACFRHLELTSRSFSAVIQELNPEL 67
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMD 120
+C+FYLVLR LDT+EDD +I K P+L F + W F+ G E + L+
Sbjct: 68 LMPICLFYLVLRGLDTIEDDMTIDLAKKEPLLREFADLMEIDGWTFTENGPNEKDRELLV 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 174
F V ++ K Y D I +IT +MG GMA + V +I++Y+ YC+YVAG
Sbjct: 128 HFDDVIAELKKVKKPYYDIIREITVKMGNGMADYALNAEHNTNGVNTIEEYELYCHYVAG 187
Query: 175 LVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG GL++LF S + L L+ SMG FLQKTNIIRD ED + R FWP+
Sbjct: 188 LVGEGLTRLFVESNLANPALLERMELTESMGQFLQKTNIIRDIHEDYVD---KRRFWPKT 244
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWSKYVN +D+ EN +KA+QC ++MV NAL H EDCL YM+ +RD ++F F AIPQ
Sbjct: 245 IWSKYVNTWDDMFKPENREKALQCSSEMVLNALKHTEDCLFYMAGMRDQSVFNFVAIPQA 304
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 350
MAI TL L + N +F VK+ +G ++ ++ T N+ V F ++ + K + D
Sbjct: 305 MAIATLELVFRNPAIFERNVKITKGDACQLMMESTQNLRVVCEVFRRYARRIHKKNDPRD 364
Query: 351 PN 352
PN
Sbjct: 365 PN 366
>gi|343425657|emb|CBQ69191.1| Farnesyl-diphosphate farnesyltransferase [Sporisorium reilianum
SRZ2]
Length = 575
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 205/358 (57%), Gaps = 33/358 (9%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSFA VI++L +L +C+FYLVLRALDTVEDD +IP + KVP+L+ F++
Sbjct: 50 CWGFLDLTSRSFAAVIKELKGELSRVICLFYLVLRALDTVEDDMTIPAERKVPLLVNFYK 109
Query: 100 HVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
++ W+F S ++ + L+ +F V + L +GY+ I DIT +MGAGMA +I
Sbjct: 110 YLEQPGWNFNESGPNEKDRQLLVEFDKVIAEYQLLDQGYKTVISDITAKMGAGMASYIEL 169
Query: 156 -CKE---VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKT 208
K+ V + +D YC++VAGLVG GLS+LF S E LSN MGLFLQKT
Sbjct: 170 SAKQPLSVSTWKHFDLYCHFVAGLVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKT 229
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL---------------KYE----ENS 249
NIIRDY ED +E R FWP++ W K K++ E
Sbjct: 230 NIIRDYAEDCDE---GRFFWPKQCWGDDYAKFSSQPDVASGIVETAPGSNKFKPADGELG 286
Query: 250 DKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRG 309
+++ L+ M+ +A+ H L Y++ L++ ++F FCAIPQ+MAI TL L + N +VF+
Sbjct: 287 QRSMYVLSSMLLDAMSHATHALDYLALLKEQSVFNFCAIPQVMAIATLELMFANPDVFKK 346
Query: 310 VVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
VK+R+G+ ++I + N DV F +S + +++ DPN + + I++ C
Sbjct: 347 NVKIRKGVAVQLILKAVNPRDVAYTFLAYSRKIHKRLSPADPNFARWAVELARIEQWC 404
>gi|320581185|gb|EFW95406.1| Farnesyl-diphosphate farnesyl transferase (squalene synthase)
[Ogataea parapolymorpha DL-1]
Length = 385
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 195/306 (63%), Gaps = 14/306 (4%)
Query: 57 QLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREW--HFSCGTKE 114
+L +LRN V +FYLVLRALDT+EDD ++ ++K+P+L F + ++W H S ++
Sbjct: 2 ELNPELRNVVMLFYLVLRALDTIEDDMTLDPELKIPMLRTFDSKLNLKDWTFHGSGPNEK 61
Query: 115 YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEY 168
++++ F + T + +L YQD I+D+T++MG GMA ++ E V ++ DYD Y
Sbjct: 62 DRIVLVNFDSILTEYHKLQPKYQDIIKDVTRKMGNGMADYVVNEEFNFNGVATVKDYDLY 121
Query: 169 CYYVAGLVGLGLSKLFYAS--GTEDLAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCR 225
C+YVAGLVG GL+++ A+ G DLA LS+SMGLFLQKTNIIRD+ ED+++ R
Sbjct: 122 CHYVAGLVGEGLTRMIAAADFGHPDLADKMYLSDSMGLFLQKTNIIRDFREDLDD---GR 178
Query: 226 MFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRF 285
FWP+EIW+K+ +KL + E+ +A+ C +++V N L HV+D L Y+S + DH+ + F
Sbjct: 179 SFWPKEIWAKHTDKLANFAQPEHLQEALNCSSELVLNVLDHVKDVLVYLSMVYDHSTYCF 238
Query: 286 CAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPK 345
CAIPQ+MAI TLAL + N VF+ VK+R+G T +I V F + ++ K
Sbjct: 239 CAIPQVMAIATLALVFQNPYVFQKNVKIRKGETCSLILECRTYEGVLNVFSRYLRVIHHK 298
Query: 346 INKNDP 351
+DP
Sbjct: 299 CPVSDP 304
>gi|336260661|ref|XP_003345124.1| hypothetical protein SMAC_07413 [Sordaria macrospora k-hell]
gi|380096529|emb|CCC06577.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 484
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 208/365 (56%), Gaps = 23/365 (6%)
Query: 5 AAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWA--FCYSMLHKVSRSFALVIQQLGTDL 62
A L HP+ L +++ K+ K+ P + C+ L SRSF+ VIQ+L +L
Sbjct: 8 AYFLLHPNQLRSIVQWKVWHDPVHKRDPSKETETEKACFRHLELTSRSFSAVIQELNPEL 67
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMD 120
+C+FYLVLR LDT+EDD +I K P+L F + W F+ G E + L+
Sbjct: 68 LMPICLFYLVLRGLDTIEDDMTIDLAKKEPLLRGFADLMEIDGWTFTENGPNEKDRELLV 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 174
F V + ++ K Y D I +IT +MG GMA + V +I++Y+ YC+YVAG
Sbjct: 128 HFDDVISELKKVKKPYYDIIREITVKMGNGMADYALNAEHNTNGVNTIEEYELYCHYVAG 187
Query: 175 LVGLGLSKLFYASGTEDLAPDSL------SNSMGLFLQKTNIIRDYLEDINEIPKCRMFW 228
LVG GL++LF S DLA +L + SMG FLQKTNIIRD ED + R FW
Sbjct: 188 LVGEGLTRLFVES---DLANPALLERMELTESMGQFLQKTNIIRDIHEDFVD---KRRFW 241
Query: 229 PREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAI 288
P+ IWSKYVN ED+ EN +KA+QC ++MV NAL H E+CL YM+ +RD ++F F AI
Sbjct: 242 PKTIWSKYVNNWEDMFKLENREKALQCSSEMVLNALKHTEECLFYMAGIRDQSVFNFVAI 301
Query: 289 PQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKIN 347
PQ MAI TL L + N +F VK+ +G ++ ++ T N+ + F ++ + K +
Sbjct: 302 PQAMAIATLELVFRNPAIFERNVKITKGDACQLMMESTQNLRVLCEVFRRYARRIHKKND 361
Query: 348 KNDPN 352
DPN
Sbjct: 362 PRDPN 366
>gi|449298453|gb|EMC94468.1| hypothetical protein BAUCODRAFT_73663 [Baudoinia compniacensis UAMH
10762]
Length = 490
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 208/365 (56%), Gaps = 21/365 (5%)
Query: 4 LAAVLRHPDDLYPLLKLKM----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLG 59
LA HP +L +++ K + EK+ PE C+ L SRSFA VIQ+L
Sbjct: 7 LAYYATHPTELRSIIQWKTWHNPVHERDEKKESPE--LKECFRQLGLTSRSFAAVIQELH 64
Query: 60 TDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--V 117
+L V +FYLVLR LDT+EDD +I + K P+L FH + D W ++ K
Sbjct: 65 PELLVPVTLFYLVLRGLDTIEDDMTIAIEEKEPLLRNFHEIIDDERWTYNGNGPHEKDRE 124
Query: 118 LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYY 171
L+ +F +++ F+++ + Y+ I DI KRMG GMA + + V +I DY+ YC+Y
Sbjct: 125 LLVKFDNITKEFVKIKEPYKVIIRDIAKRMGNGMADYAKNQDLEANGVRTIKDYELYCHY 184
Query: 172 VAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW 228
VAGLVG GL++LF + + L L SMG FLQ+TNIIRD ED + R FW
Sbjct: 185 VAGLVGEGLTRLFVEAKLANPALLQRPELMESMGQFLQQTNIIRDIREDHED---KRYFW 241
Query: 229 PREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAI 288
P+E+WSKYV K DL EN +KA+ C ++M+ AL ++CL YM+ +++ ++F F AI
Sbjct: 242 PKEVWSKYVPKFADLFLPENREKALHCQSEMILIALRRADECLFYMAGVKEQSVFNFVAI 301
Query: 289 PQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKIN 347
PQ MAI TL LC+ N +F +K+ +G ++ ++ T N+ V F ++ + K +
Sbjct: 302 PQSMAIATLELCFQNYAMFERNIKITKGSACQLMLESTQNLQVVCDVFRRYARKIHRKNS 361
Query: 348 KNDPN 352
DP+
Sbjct: 362 PRDPS 366
>gi|358367865|dbj|GAA84483.1| squalene synthetase [Aspergillus kawachii IFO 4308]
Length = 372
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 206/362 (56%), Gaps = 30/362 (8%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C++ L + SRSF+++I++L ++L +CIFYLVLR LDT+EDD SIP K +L F
Sbjct: 22 CFNFLDQTSRSFSVIIKELHSELLVPICIFYLVLRGLDTIEDDPSIPVKAKEALLRGFEN 81
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W + E K L+ FHHV + L Y+ I+DITK MG GMA F K
Sbjct: 82 ILMKDGWTYDGNRPEEKDRELLVHFHHVIKEYKALKPTYKHIIKDITKIMGNGMADFCHK 141
Query: 158 ---------EVESIDDYDEYCYYVAGLVGLGLSKLFYAS---GTEDLAPDSLSNSMGLFL 205
V +I +Y+ YCYYVAG VG GL++ F + + L +L SM LFL
Sbjct: 142 VTLGRPDNTSVMTIAEYELYCYYVAGCVGEGLTRFFIEARLCNSSLLDNPTLPRSMSLFL 201
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALM 265
QKTNIIRD ED + R FWPR+IWSKYV+ DL EN + A++C ++M+ NAL
Sbjct: 202 QKTNIIRDVSEDHEDN---RRFWPRQIWSKYVSNFADLFKPENREAAIECSSEMILNALE 258
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVF-RGV-VKMRRGLTAKV-I 322
HV++CL Y++ L + +IF FC +PQ MAI TL LC++N +F R V +K+ RG ++ +
Sbjct: 259 HVKECLIYLAGLNEQSIFNFCVVPQCMAIATLELCFSNPALFERNVNIKISRGDACQLML 318
Query: 323 DRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRFKILHY 382
+ T + + ++ +K K+ PNATK I K C G + + K L
Sbjct: 319 ECTQGLPGLCRFVSRYARCIKA---KSSPNATKLFE----INKIC---GTIEEAAKTLIQ 368
Query: 383 SK 384
S+
Sbjct: 369 SQ 370
>gi|336467282|gb|EGO55446.1| hypothetical protein NEUTE1DRAFT_67078 [Neurospora tetrasperma FGSC
2508]
gi|350288089|gb|EGZ69325.1| putative squalene synthetase [Neurospora tetrasperma FGSC 2509]
Length = 481
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 205/362 (56%), Gaps = 17/362 (4%)
Query: 5 AAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWA--FCYSMLHKVSRSFALVIQQLGTDL 62
A L HP+ L +++ K+ ++ P + C+ L SRSF+ VIQ+L +L
Sbjct: 8 AYFLLHPNQLRSIVQWKVWHEPVHRRDPSKETETEKACFRYLELTSRSFSAVIQELNPEL 67
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMD 120
+C+FYLVLR LDT+EDD +I K P+L F + W F+ G E + L+
Sbjct: 68 LMPICLFYLVLRGLDTIEDDMTIDLAKKEPLLREFADLMEIDGWTFTENGPNEKDRELLV 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 174
F V ++ K Y D I +IT +MG GMA + V +I++Y+ YC+YVAG
Sbjct: 128 HFDDVIAELKKVKKPYYDIIREITVKMGNGMADYALNAEHNTNGVNTIEEYELYCHYVAG 187
Query: 175 LVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG GL++LF S + L L+ SMG FLQKTNIIRD ED + R FWP+
Sbjct: 188 LVGEGLTRLFVESNLANPALLERMELTESMGQFLQKTNIIRDIHEDYVD---KRRFWPKT 244
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWSKYVN +D+ +N +KA+QC ++MV NAL H EDCL YM+ +RD ++F F AIPQ
Sbjct: 245 IWSKYVNTWDDMFKPQNREKALQCSSEMVLNALKHTEDCLFYMAGMRDQSVFNFVAIPQA 304
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 350
MAI TL L + N +F VK+ +G ++ ++ T N+ V F ++ + K + D
Sbjct: 305 MAIATLELVFRNPAIFERNVKITKGDACQLMMESTQNLRVVCEVFRRYARRIHKKNDPRD 364
Query: 351 PN 352
PN
Sbjct: 365 PN 366
>gi|406859592|gb|EKD12656.1| squalene synthetase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 480
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEP--HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP+ L +L+ ++ + P + + C+ L+ SRSF+ VIQ+L +L V
Sbjct: 13 HPNQLRSILQWQIWHEPVHLRNPAKESDNVKQCFKYLNMTSRSFSSVIQELTPELLLPVA 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
+FYL+LR LDT+EDD +IP ++K P L FH + W F+ + K L+ F V
Sbjct: 73 LFYLILRGLDTIEDDMTIPLELKEPKLRGFHDILEQDGWTFTENGPDEKDRELLVHFDVV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCYYVAGLVGLG 179
F + Y+ I+DIT++MG GMA + V++I DY++YC+YVAGLVG G
Sbjct: 133 IREFKHVKPAYRAIIKDITEKMGNGMADYANNAEHSLNGVDTIKDYEKYCHYVAGLVGDG 192
Query: 180 LSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L++LF S + L LS SMG FLQKTNIIRD ED ++ R FWP+EIWS++
Sbjct: 193 LTRLFVESKLANPALLQRPELSESMGQFLQKTNIIRDVREDFDD---KRRFWPKEIWSRH 249
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGT 296
V K ++L +N KA+ C ++MV N+L H ++CL YM+ ++D ++F F AIPQ MAI T
Sbjct: 250 VTKFDELFEPQNIQKALNCSSEMVLNSLRHADECLFYMAGIKDQSVFNFVAIPQSMAIAT 309
Query: 297 LALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
L L + N +F VK+ RG ++ ++ + N+ + F + ++ K DPN
Sbjct: 310 LELIFQNPSIFTKNVKITRGDACQLMMESSQNLRSLCEIFKRYVRRIQKKNTPRDPN 366
>gi|392564982|gb|EIW58159.1| squalene synthase [Trametes versicolor FP-101664 SS1]
Length = 497
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 208/390 (53%), Gaps = 35/390 (8%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPP---------EPHWAFCYSMLHKVSRSFALVIQQLGT 60
HP + LL+ K+ P P C+ L + SRSF+ VI++L
Sbjct: 13 HPFEFRTLLQYKLWHEPKRDITEPSEFATSGWDRPSMRRCWEFLDETSRSFSGVIKELEG 72
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVL 118
DL VC+FYLVLR LDT+EDD ++ + K PIL FH+ W F+ CG E + +
Sbjct: 73 DLARVVCLFYLVLRGLDTIEDDMTLSDEKKQPILRQFHKLAVTPGWTFTECGPNEKDRQV 132
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDYDEYCYY 171
+ ++ VS L Y D I DIT++M GMA + + VE+ID+Y+ YC+Y
Sbjct: 133 LVEWTVVSEELNRLDPRYLDIIIDITEKMQTGMADYAHRAATTDKLYVETIDEYNLYCHY 192
Query: 172 VAGLVGLGLSKLFYASGTE-DLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIPKCRMFW 228
VAGLVG G+++L+ ASG E D D L SN+MG LQKTNIIRD+ ED E R FW
Sbjct: 193 VAGLVGEGVTRLWSASGKEADWLGDQLELSNAMGTMLQKTNIIRDFREDAEER---RFFW 249
Query: 229 PREIWSKYV-----------NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
PREIW + V +L L N +A+ + M+ + L H D L Y+ L
Sbjct: 250 PREIWGREVYGKAAGGRPAITELPQLYEPGNEKQALWVQSGMIVDVLCHACDSLDYLRLL 309
Query: 278 RDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYD 337
++F FCAIPQ MA+ TL+LC+ N ++F+ +K+R+ A +I ++ N DV F D
Sbjct: 310 TKQSVFCFCAIPQTMAMATLSLCFMNYDMFQRNIKIRKAEAASLIMKSTNPRDVAFIFRD 369
Query: 338 FSNILKPKINKNDPNATKTLSRVEAIQKAC 367
+S + + + DPN K I++ C
Sbjct: 370 YSRRMHARASPEDPNFIKLSVACGKIEQWC 399
>gi|453088423|gb|EMF16463.1| farnesyl-diphosphate farnesyltransferase [Mycosphaerella populorum
SO2202]
Length = 492
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 194/330 (58%), Gaps = 15/330 (4%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P+ C+ L+ SRSFA VIQ+L +L VC+FYL+LR LDT+EDD +IP + K P+L
Sbjct: 40 PNLKECFRFLNLTSRSFAAVIQELHPELLVPVCLFYLILRGLDTIEDDMTIPIEKKEPLL 99
Query: 95 IAFHRHVYDREWHF-SCGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
F + D W F G E + L+ +F V+ F + Y+ I+DITKRMG GMA
Sbjct: 100 RKFDELIEDEAWTFHENGPNEKDRELLVKFDVVAKEFNKQKDAYKLIIKDITKRMGNGMA 159
Query: 153 KFI------CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGL 203
+ V++I DY+ YC+YVAGLVG GL++LF + + L L SMG
Sbjct: 160 DYAKNADHNAHGVQTIKDYELYCHYVAGLVGEGLTRLFVEAKLANPALLQRPELMESMGQ 219
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
FLQ+TNIIRD ED + R FWP+E+WSK+V+K DL +N +KA+ C ++MV A
Sbjct: 220 FLQQTNIIRDIREDHEDK---RYFWPKEVWSKHVDKFSDLFEPQNREKALNCSSEMVLLA 276
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-I 322
L ++CL YM+ +++ ++F F AIPQ MAI TL L + N VF +K+ +G ++ +
Sbjct: 277 LQRADECLFYMAGIKEQSVFNFVAIPQSMAIATLELVFQNPAVFDRNIKITKGCACQLMM 336
Query: 323 DRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
+ T N+ V F F+ + K DPN
Sbjct: 337 ESTQNLQLVCDIFRRFARKIHKKNKPTDPN 366
>gi|392585987|gb|EIW75325.1| squalene synthase [Coniophora puteana RWD-64-598 SS2]
Length = 497
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 203/373 (54%), Gaps = 29/373 (7%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQ----AEKQIPPEPHW-----AFCYSMLHKVSRSFALV 54
L + HP + L+ + Q +KQ W C+ +L SRSF +
Sbjct: 9 LGLLFTHPTEFRTLINFYLWHEQKRDITDKQEHSTSGWDRSTMRRCWELLDMTSRSFGAI 68
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKE 114
+++L DL VC++YLVLR LDT+EDD +IP + K P+L +FH W F +
Sbjct: 69 VKELDGDLARIVCMYYLVLRGLDTIEDDMTIPDESKQPLLRSFHEKTVTPGWKFDGNGPD 128
Query: 115 YK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
K L+ ++ V L Y+ I DI ++M GMA + K VE++ +Y
Sbjct: 129 EKDRQLLVEYDTVVEEINRLAPEYKKVILDICEKMETGMADYAHKAATTGSIYVETVSEY 188
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDYLEDINE 220
D YC+YVAGLVG GL++++ AS E AP LSNSMGL LQKTNIIRD+ ED E
Sbjct: 189 DLYCHYVAGLVGEGLTRIWSASRKE--APWLCDQLELSNSMGLMLQKTNIIRDFREDAEE 246
Query: 221 IPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRD 279
R FWPREIW+KY ++ DL +KA + M+ +AL H D L Y+ L++
Sbjct: 247 ---GRYFWPREIWAKYGFQEMRDLYAPGAEEKAGWIQSAMILDALRHATDSLDYLRLLKN 303
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFS 339
+IF FCA+P MA+ TL+LC+ N E+F+ +K+R+ A++I + N +V L F D++
Sbjct: 304 QSIFVFCAVPVCMAMATLSLCFQNPEMFQRNIKIRKAEAARLIMNSTNPREVALIFRDYA 363
Query: 340 NILKPKINKNDPN 352
+ + DPN
Sbjct: 364 RAIHHRAKPQDPN 376
>gi|393214206|gb|EJC99699.1| farnesyl-diphosphate farnesyltransferase [Fomitiporia mediterranea
MF3/22]
Length = 559
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 194/327 (59%), Gaps = 17/327 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF+ VI++L +L +C+FYLVLR LDT+EDD +I +VK P+L +F +
Sbjct: 119 CWYFLDMTSRSFSSVIKELDGELARVICLFYLVLRGLDTIEDDMTIADEVKQPLLRSFAQ 178
Query: 100 HVYDREWHFSC-GTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI-- 155
W F+ G +E + L+ +F+ V L L Y I DI +M GMA +
Sbjct: 179 KCATPGWTFTGNGPRERDRQLLVEFNVVIDELLRLDPSYLTVILDICDKMAQGMADYAHL 238
Query: 156 -----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPD--SLSNSMGLFLQK 207
+ S++D D YC+YVAGLVG GLS+LF ASG E D +LSN+MGL LQK
Sbjct: 239 AYKTGTLGLGSMEDLDLYCHYVAGLVGEGLSRLFSASGKEVSWLGDQLALSNAMGLLLQK 298
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE--DLKYEENSDKAVQCLNDMVTNALM 265
TN++RD+ ED++ R+FWPR IWS+ + ++ EN +A+ CL+ M +AL
Sbjct: 299 TNVLRDFREDVD---AGRLFWPRAIWSESFGFADPREMYKPENEQRALWCLSAMTLDALR 355
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H D L+Y++ L+ ++F FCAIPQ MA+ TLALC+ N VF VK+R+ A++I R+
Sbjct: 356 HAVDSLEYIALLKTQSVFNFCAIPQTMAMATLALCFMNPAVFHRNVKIRKAAAARLIMRS 415
Query: 326 NNMTDVYLAFYDFSNILKPKINKNDPN 352
N DV F D++ + K DPN
Sbjct: 416 TNPRDVAYMFRDYARDIHAKAVPADPN 442
>gi|390603374|gb|EIN12766.1| farnesyl-diphosphate farnesyltransferase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 491
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 206/389 (52%), Gaps = 28/389 (7%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQ----AEKQIPPEPHW-----AFCYSMLHKVSRSFALV 54
L ++ HP + L++ K+ + +Q P W C+ L SRSF+ V
Sbjct: 7 LTMLVLHPVEFRTLIQYKLYHEKKRDITAQQEHPTSGWDRKSMRRCWEFLDMTSRSFSAV 66
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKE 114
I++L DL + +FYLVLR LDT+EDD +IP + K P+L FH W F +
Sbjct: 67 IKELDGDLARTIALFYLVLRGLDTIEDDMTIPDEKKQPLLRTFHEKTVTPGWTFDGNGPD 126
Query: 115 YK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
K L+ ++ V+ L Y++ I DI +M GMA F K +++I+DY
Sbjct: 127 EKDRQLLVEYDVVTEEMGLLDPNYREVIVDICHKMEDGMADFAHKAATTGRIYLDTIEDY 186
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIP 222
D YC+YVAGLVG GLS+LF ASG E +SNSMGL LQKTNIIRD+ EDI E
Sbjct: 187 DLYCHYVAGLVGEGLSRLFSASGKEANWLQYQLEISNSMGLLLQKTNIIRDFREDIEE-- 244
Query: 223 KCRMFWPREIWSKY----VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALR 278
R FWP+EIW + ++ L EN A+ ++ MV +AL H D L Y+ L+
Sbjct: 245 -KRYFWPKEIWGREDYGGFTEMAQLAQPENERNALWAVSGMVVDALRHATDALDYLRVLK 303
Query: 279 DHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDF 338
+ ++F FCAIP MA+ TL L + N E+ + VK+R+ AK+I + N DV F D
Sbjct: 304 NQSVFNFCAIPATMAMATLELVFMNPEMLQRNVKIRKAAAAKLIMASTNPRDVAYLFRDS 363
Query: 339 SNILKPKINKNDPNATKTLSRVEAIQKAC 367
+ + K + DPN + I++ C
Sbjct: 364 ARKIHAKASPADPNFLRISVACGKIEQWC 392
>gi|452989635|gb|EME89390.1| hypothetical protein MYCFIDRAFT_26282 [Pseudocercospora fijiensis
CIRAD86]
Length = 490
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 212/369 (57%), Gaps = 23/369 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLK-----MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVI 55
+ S+A L HP +L +++ K + R K+ C+ L+ SRSFA VI
Sbjct: 4 VSSVAYYLFHPSELRAIIQWKTWHNPVHERDESKE---SAELKECFRQLNLTSRSFASVI 60
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEY 115
Q+L +L V +FYL+LRALDT+EDD +I K P+L F ++ D W ++ +
Sbjct: 61 QELHPELLVPVALFYLILRALDTIEDDMTIDIGEKEPLLREFDHYIDDESWTYNGNGPDE 120
Query: 116 K--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDE 167
K L+ +F+ VS F ++ + Y+ I DITKRMG GMA + V++I DY+
Sbjct: 121 KDRELLVKFNCVSREFNKIKEEYKVIIRDITKRMGNGMADYAKNANHNANGVKTIKDYEL 180
Query: 168 YCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YC+YVAGLVG GL++LF + + L L SMG FLQ+TNIIRD ED +
Sbjct: 181 YCHYVAGLVGEGLTRLFVEAKLANPALLQRPELMESMGQFLQQTNIIRDIREDHED---K 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWP+E+WSKYV+ DL EN +KA+QC ++MV AL ++CL YM+ +++ ++F
Sbjct: 238 RYFWPKEVWSKYVDTFSDLFLPENKEKALQCSSEMVLIALNRADECLFYMAGVKEQSVFN 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR-TNNMTDVYLAFYDFSNILK 343
F AIPQ MAI TL LC+ N ++F +K+ +G ++ + T N+ V F ++ +
Sbjct: 298 FVAIPQTMAIATLELCFQNYDMFNRNIKITKGQACDLMMKSTQNLQLVCDVFRTYARKIH 357
Query: 344 PKINKNDPN 352
K +DP+
Sbjct: 358 RKNKPSDPH 366
>gi|156060769|ref|XP_001596307.1| hypothetical protein SS1G_02527 [Sclerotinia sclerotiorum 1980]
gi|154699931|gb|EDN99669.1| hypothetical protein SS1G_02527 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 451
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 192/332 (57%), Gaps = 19/332 (5%)
Query: 1 MGSLAAVLR---HPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVI 55
MG L +L HP+ L +L+ K+ + P + + C+ L SRSF+ VI
Sbjct: 1 MGLLKTLLYLSVHPNQLRAILQWKLWHDPVHTRDPTKESQSLKDCFKYLELTSRSFSSVI 60
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKE 114
Q+L +L V +FYL+LR LDTVEDD +IP + K P+L F + W F+ G E
Sbjct: 61 QELNPELLVPVALFYLILRGLDTVEDDMTIPLEKKEPLLRTFDSIIEQDGWTFNENGPNE 120
Query: 115 Y-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDE 167
+ L+ F V T F + YQ I+DITK+MG GMA + V +I DY+
Sbjct: 121 KDRELLVHFDCVITEFKKCKPAYQKIIKDITKKMGDGMADYANNAEHNINGVNTIKDYEL 180
Query: 168 YCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YC+YVAGLVG GL++LF S + L LS SMG FLQKTNIIRD ED ++
Sbjct: 181 YCHYVAGLVGDGLTRLFVESKLANPALLNRPELSESMGQFLQKTNIIRDIREDFDD---K 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R FWP+EIWSK+V +DL +N + A+ C ++MV N+L H ++CL YM+ ++D ++F
Sbjct: 238 RRFWPKEIWSKHVENFDDLFDPKNREVALACSSEMVLNSLRHADECLFYMAGIKDQSVFN 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRG 316
F AIPQ MAI TL L + N +F VK+ +G
Sbjct: 298 FVAIPQAMAIATLELVFQNPAIFEKNVKITKG 329
>gi|95118478|gb|ABF57213.1| squalene synthase [Ganoderma lucidum]
gi|95118480|gb|ABF57214.1| squalene synthase [Ganoderma lucidum]
Length = 467
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 213/396 (53%), Gaps = 35/396 (8%)
Query: 4 LAAVLRHPDDLYPLLKLKM--ASRQAEKQIPPEPHWAF-------CYSMLHKVSRSFALV 54
L +L HP + L++ K+ ++ Q+ P + C+ L + SRSF+ V
Sbjct: 7 LTLLLTHPFEFRVLIQYKLWHEPKRDITQVSEHPTSGWDRPTMRRCWEFLDQTSRSFSGV 66
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTK 113
I+++ DL +C+FYLVLR LDT+EDD ++P + K PIL FH+ W F CG K
Sbjct: 67 IKEVEGDLARVICLFYLVLRGLDTIEDDMTLPDEKKQPILRQFHKLAVKPGWTFDECGPK 126
Query: 114 EY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
E + L+ ++ VS L Y+D I DI ++M GMA + K + ++D+Y
Sbjct: 127 EKDRQLLVEWTVVSEELNRLDACYRDIIIDIAEKMQTGMADYAHKAATTNSIYIGTVDEY 186
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTE-DLAPDSL--SNSMGLFLQKTNIIRDYLEDINEIP 222
+ YC+YVAGLVG GL++ + ASG E + D L +N+MGL LQKTNIIRD+ ED E
Sbjct: 187 NLYCHYVAGLVGEGLTRFWAASGKEAEWLGDQLELTNAMGLMLQKTNIIRDFREDAEER- 245
Query: 223 KCRMFWPREIWSK-----------YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R FWPREIW + ++ +L N +A+ + MV + L H D L
Sbjct: 246 --RFFWPREIWGRDAYGKAVGRANGFREMHELYERGNEKQALWVQSGMVVDVLGHATDSL 303
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDV 331
Y+ L +IF FCAIPQ MA+ TL+LC+ N ++F +K+RR A +I R+ N DV
Sbjct: 304 DYLRLLTKQSIFCFCAIPQTMAMATLSLCFMNYDMFHNHIKIRRAEAASLIMRSTNPRDV 363
Query: 332 YLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
F D++ + + DP+ + I++ C
Sbjct: 364 AYIFRDYARKMHARALPEDPSFLRLSVACGKIEQWC 399
>gi|403416731|emb|CCM03431.1| predicted protein [Fibroporia radiculosa]
Length = 600
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 208/377 (55%), Gaps = 40/377 (10%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPH----WAF-----CYSMLHKVSRSFALVIQQLGT 60
HP + LL+ K+ P H W C+ L S++ VI+Q+
Sbjct: 13 HPLEFLTLLRFKLFHSPKRDITAPSEHVYTGWDHQTMRRCWEFLDMKSKTIGSVIKQIEG 72
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKV--L 118
D VCIFY++LRALDT+EDD +IP + K +L +F W F+ + + K+ +
Sbjct: 73 DTARIVCIFYIILRALDTIEDDMTIPEEQKQTLLRSFDEFAMLPGWTFTESSPKEKLRQM 132
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE--------VESIDDYDEYCY 170
+ +F+ + + L + Y++ I DIT++MG GMA + C+ +E+I D+D YC+
Sbjct: 133 LVEFNVIHEELVRLDEPYREIILDITRKMGNGMADY-CQRAGVTGQLYIETIADFDLYCH 191
Query: 171 YVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMGLFLQKTNIIRDYLEDINEIPKCR 225
YVAGLVG G++ +F SG E AP +L+NSMGLFLQK +IIRDY EDI E R
Sbjct: 192 YVAGLVGEGMTCIFAQSGKE--APWLRQQLALANSMGLFLQKIDIIRDYREDIEE---DR 246
Query: 226 MFWPREIWSKYV----------NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMS 275
+WP+EIW + V NK+E++ N +A+ L+ M+ +AL H D L Y+
Sbjct: 247 FYWPKEIWGRQVYGKAVGRPAFNKMEEMYQRGNERQALWVLSGMIVDALRHAIDALDYLH 306
Query: 276 ALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAF 335
L+ ++F FCA PQ++ I L +CY N EVF G +R+G A ++ R+ + DV F
Sbjct: 307 LLQRQSVFNFCAFPQVVDIARLYVCYMNSEVFHGTTNIRKGEAASLVMRSTSPRDVACVF 366
Query: 336 YDFSNILKPKINKNDPN 352
+++ L+ K N DPN
Sbjct: 367 REYACKLRKKANLEDPN 383
>gi|395332008|gb|EJF64388.1| squalene synthase [Dichomitus squalens LYAD-421 SS1]
Length = 508
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 214/396 (54%), Gaps = 35/396 (8%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPH----W-----AFCYSMLHKVSRSFALV 54
LA +L HP + LL+ K+ P H W C+ L SRSF+ V
Sbjct: 10 LALLLTHPFEFRVLLQYKLWHEPKRDISQPSEHATSGWDRPTMRRCWHFLDLTSRSFSGV 69
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF-SCGTK 113
I+++ DL +C+FYLVLR LDT+EDD +IP + K P+L FH+ +W F CG
Sbjct: 70 IKEVEGDLARVICLFYLVLRGLDTIEDDMTIPDEKKQPLLRQFHKLAVKPDWTFDECGPN 129
Query: 114 EY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
E + L+ ++ VS L Y++ I D+T++M GMA + K +E++D+Y
Sbjct: 130 EKDRQLLVEWTVVSEELNRLDPRYREIILDVTEKMQYGMADYAHKAAATDELYIETVDEY 189
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIP 222
+ YC+YVAGLVG GL++ + ASG E L+N+MGL LQKTNIIRD+ ED E
Sbjct: 190 NLYCHYVAGLVGEGLTRFWAASGKEAAWLGDQLELTNAMGLLLQKTNIIRDFREDAEER- 248
Query: 223 KCRMFWPREIWS-----KYVNK------LEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R FWPRE+W K V + + +L N +A+ L+ MV + L H D L
Sbjct: 249 --RFFWPREVWGAALYGKAVGRAGGFADITELYTPGNEKQALWVLSGMVVDVLGHATDAL 306
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDV 331
Y+ L +IF FCAIPQ MA+ TL+LC+ N ++F+ +K+R+ A +I ++ N DV
Sbjct: 307 DYLRLLTKQSIFCFCAIPQTMAMATLSLCFMNYDMFQRHIKIRKAEAASLIMKSTNPRDV 366
Query: 332 YLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
F D++ + + +DP+ + I++ C
Sbjct: 367 AYIFRDYARRIHARALPDDPSFLRLSVACGRIEQWC 402
>gi|451997451|gb|EMD89916.1| hypothetical protein COCHEDRAFT_1225494 [Cochliobolus
heterostrophus C5]
Length = 482
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 202/346 (58%), Gaps = 19/346 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L++ SRSFA VI +L +L V +FYL LR LDT+EDD +IP K P L F
Sbjct: 44 CYHFLNQTSRSFAAVILELHPELVAPVTLFYLALRGLDTIEDDMTIPLAKKEPFLRNFQD 103
Query: 100 HVYDREWHFS-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W F+ G E + L+ +F+ V F ++ Y++ I+DIT+RMG GMA +
Sbjct: 104 FLEQDGWTFTENGPNEKDRQLLVEFNVVIEEFKKIKPAYKEIIKDITRRMGNGMADYANN 163
Query: 158 E-----VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA----PDSLSNSMGLFLQKT 208
V++I +Y+ YC+YVAGLVG G ++LF +G + A P+ L SMG LQ+
Sbjct: 164 AEFNAGVKTIKEYELYCHYVAGLVGEGCTRLFVEAGLANAALLKRPE-LMESMGQLLQQV 222
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NI RD ED ++ R FWP+EIWSK+V+ EDL EN +KA+ ++M+ AL VE
Sbjct: 223 NITRDIREDFDD---GRRFWPKEIWSKHVDNFEDLFKPENREKALNASSEMILTALTRVE 279
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNN 327
D L Y++ LR+ ++F FCA+PQ MAI TL C+ N ++F VK+ +G ++ ++ T N
Sbjct: 280 DSLYYLAGLREQSVFNFCAMPQSMAIATLEACFQNYDLFHKNVKITKGEACQLMLESTQN 339
Query: 328 MTDVYLAFYDFSNILKPKINKNDPNATK---TLSRVEAIQKACMDS 370
+ V F ++ + K N +DP+ K TL ++E ++ S
Sbjct: 340 LQLVCEVFRRYARKIAKKNNPHDPSFLKISITLGKIEQFIESIFPS 385
>gi|116200642|ref|XP_001226133.1| hypothetical protein CHGG_10866 [Chaetomium globosum CBS 148.51]
gi|88175580|gb|EAQ83048.1| hypothetical protein CHGG_10866 [Chaetomium globosum CBS 148.51]
Length = 469
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 204/362 (56%), Gaps = 23/362 (6%)
Query: 8 LRHPDDLYPLLKLKM-----ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDL 62
L HP+ L +++ K+ R E + E A C+ L SRSF+ VI++L +L
Sbjct: 11 LVHPNQLRSIIQWKVWHEPVHRRNTEDETETE---AACFQYLDLTSRSFSAVIKELNPEL 67
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLMD 120
+C+FYLVLR LDT+EDD +I K P+L F H+ W F + ++ + L+
Sbjct: 68 LMPICLFYLVLRGLDTIEDDMTIDIKEKEPLLRNFSVHMEQDGWTFDKNGPNEKDRELLV 127
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAG 174
F V ++ K Y + I+DIT +MG GMA + V +I++Y+ YC+YVAG
Sbjct: 128 HFDSVIVELKKVKKPYYEIIKDITIKMGNGMADYAINAEHNVNGVNTIEEYELYCHYVAG 187
Query: 175 LVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
LVG GL++LF AS + L L+ SMG LQK NIIRD ED + R FWP+E
Sbjct: 188 LVGEGLTRLFVASELANPQLLVRTDLTESMGQMLQKVNIIRDVHEDWVD---KRRFWPKE 244
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWS+YV +DL EN +KA+QC + MV NAL H ++CL YM+ +RD ++F F AIPQ
Sbjct: 245 IWSQYVTNWDDLFALENREKALQCSSHMVLNALKHADECLFYMAGIRDQSVFNFVAIPQS 304
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 350
MA+ TL L + N VF +K+ +G ++ I+ T N+ V F + + K + D
Sbjct: 305 MAMATLELVFRNPAVFERNIKITKGDACQLMIESTQNLRVVCDVFRKYVKRIHKKNDPRD 364
Query: 351 PN 352
PN
Sbjct: 365 PN 366
>gi|5923857|gb|AAD56387.1|AF181557_1 squalene synthase [Artemisia annua]
Length = 124
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/124 (87%), Positives = 118/124 (95%)
Query: 168 YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
YC+YVAGLVG+GLSKLF++SGTE L DS+SNSMGLFLQKTNIIRDYLEDINEIPK RMF
Sbjct: 1 YCHYVAGLVGIGLSKLFHSSGTEILFSDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMF 60
Query: 228 WPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 287
WPREIWSKYVNKLEDLKYEENS+KAVQCLNDMVTNAL+H+EDCLKYMS L+D AIFRFCA
Sbjct: 61 WPREIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCA 120
Query: 288 IPQI 291
IPQ+
Sbjct: 121 IPQV 124
>gi|323451825|gb|EGB07701.1| hypothetical protein AURANDRAFT_2849, partial [Aureococcus
anophagefferens]
Length = 316
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 189/317 (59%), Gaps = 37/317 (11%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI---PTDVKVPILIA 96
C ML KVSRSFA VIQQL +C+FYLVLRALDTVEDD + DVK L +
Sbjct: 1 CNDMLCKVSRSFAAVIQQLPAGCCIDICVFYLVLRALDTVEDDMTYYKGRLDVKQAELRS 60
Query: 97 FHRHVY---DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
FH D CG + +VL++QF V+ F L K +D I+DIT +MG GMA
Sbjct: 61 FHEARLMNPDAPPIMGCGEGDERVLLEQFGAVARVFATLPKESRDVIKDITDKMGGGMAD 120
Query: 154 FICKEV----ESIDDYDEYCYYVAGLVGLGLSKLFYASG--TEDLAPDSL---------- 197
++ ++ + D Y+ YC+ VAGLVG GL+ +F G +E+LA L
Sbjct: 121 YVTADLVQGTKDEDAYNLYCHNVAGLVGEGLTGIFVGRGYESEELAEGGLLKWPFCGEDN 180
Query: 198 ----SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY--VNKLEDLKY------ 245
+NSMGLFLQKTNIIRDYLED + R FWP+ +WSK+ L D
Sbjct: 181 KLGLANSMGLFLQKTNIIRDYLEDYVD---GRAFWPKTVWSKHATTGDLGDFTRPCARLG 237
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
+ SD+A+ CL++++ +AL V D LKY+ ++ ++RFCAIPQ+MAI TL C++N +
Sbjct: 238 KGASDRALACLDELIADALELVPDALKYLEKIKTPEVYRFCAIPQVMAIATLVECFDNPK 297
Query: 306 VFRGVVKMRRGLTAKVI 322
+F GVVK+R+G+ A++I
Sbjct: 298 LFTGVVKIRKGMAARLI 314
>gi|328353452|emb|CCA39850.1| farnesyl-diphosphate farnesyltransferase [Komagataella pastoris CBS
7435]
Length = 374
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 171/267 (64%), Gaps = 16/267 (5%)
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF---SCGTKEYKVLMDQFHH 124
IFYLVLRALDTVEDD +I D+K+P+L +F + + W F S K+ +VL+D F
Sbjct: 2 IFYLVLRALDTVEDDMTIKPDIKIPLLRSFDEKLNLKSWSFDGNSPDEKDRQVLVD-FTD 60
Query: 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGL 178
V + L YQD I+DIT +MG GMA +I E V ++ DYD YC+YVAGLVG
Sbjct: 61 VLEEYHRLKPVYQDVIKDITHKMGNGMADYITDEEFNLNGVATVKDYDLYCHYVAGLVGE 120
Query: 179 GLSKLFYASGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
GL+ L +G D + LS SMGLFLQKTNIIRDY ED+++ R FWP+EIWSK
Sbjct: 121 GLTHLIVEAGFGDPKLEDNMQLSESMGLFLQKTNIIRDYREDLDD---GRSFWPKEIWSK 177
Query: 236 YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIG 295
Y + L D EN +K + C++++V N + H++D L Y+S++ D + + FC IPQ+MAI
Sbjct: 178 YADSLSDFSKRENYEKGLDCISELVLNTMDHIKDVLVYLSSVYDFSSYNFCVIPQVMAIA 237
Query: 296 TLALCYNNIEVFRGVVKMRRGLTAKVI 322
TLA + N +VF VK+R+G T +I
Sbjct: 238 TLATVFRNEKVFETNVKIRKGTTCYLI 264
>gi|313509732|gb|ADR66114.1| squalene synthase, partial [Artemisia campestris]
Length = 149
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/149 (71%), Positives = 127/149 (85%)
Query: 142 DITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSM 201
D +MG GMAKFI EV++I+DYDEYC+Y GLVG+GLSKLF+ASG E PD +SNSM
Sbjct: 1 DTVMKMGVGMAKFIRDEVDTINDYDEYCHYATGLVGIGLSKLFHASGKEISLPDPISNSM 60
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQK NIIRD+ EDINE+PK +FWPREIWSKYV+K ED++++ NS+KA++CLNDMVT
Sbjct: 61 GLFLQKANIIRDFHEDINEVPKPLIFWPREIWSKYVDKFEDMRHKNNSEKALECLNDMVT 120
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
NAL+H+EDCLKYMS LRD AIFR CAIPQ
Sbjct: 121 NALIHIEDCLKYMSNLRDPAIFRSCAIPQ 149
>gi|308802854|ref|XP_003078740.1| FDFT_NICBE Farnesyl-diphosphate farnesyltransferase (ISS)
[Ostreococcus tauri]
gi|116057193|emb|CAL51620.1| FDFT_NICBE Farnesyl-diphosphate farnesyltransferase (ISS), partial
[Ostreococcus tauri]
Length = 210
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 154/210 (73%), Gaps = 4/210 (1%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG+L +L HP D+ LL++ M + +A K++P + + A+CY +L+KVSRSFA+VIQQL
Sbjct: 1 MGALGMILTHPGDVPSLLRVAMMANRA-KRLPRDANLAYCYDVLNKVSRSFAIVIQQLDE 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
+LR+AVC+FYL LRALDTVEDD SIP D K+P L FH +++D ++ CG K Y+ LM
Sbjct: 60 ELRDAVCVFYLALRALDTVEDDMSIPIDEKLPQLYDFHEYIFDPKYSTECGEKHYRDLMM 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+ V++ FL+L K Y+D I DI +RMGAGMAKFI KEV + D+DEYC+YVAGLVG+GL
Sbjct: 120 NYPRVTSVFLKLKKPYRDVIADIARRMGAGMAKFIEKEVMDMSDFDEYCHYVAGLVGIGL 179
Query: 181 SKLFYASGTED---LAPDSLSNSMGLFLQK 207
S L+ AS E + + LSN+MGLFLQK
Sbjct: 180 SNLWGASKMESEEFIGEEKLSNAMGLFLQK 209
>gi|402075783|gb|EJT71206.1| squalene synthase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 467
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 207/382 (54%), Gaps = 20/382 (5%)
Query: 1 MGSL---AAVLRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVI 55
MG L A + HP L +++ K+ + P + P C+ L SRSFA VI
Sbjct: 1 MGGLKDVAYLAFHPVQLRNIVQWKLWHEPVHHRDPAKDTPTQKKCFEYLDLTSRSFAAVI 60
Query: 56 QQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKE 114
++L +L +C+FYLVLR LDT+EDD +I D K P+L F ++ W F+ G E
Sbjct: 61 KELNPELLMPICLFYLVLRGLDTIEDDMTIDLDKKEPLLRGFADNMEKDGWVFTENGPNE 120
Query: 115 Y-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDE 167
+ L+ F V + K Y D I DIT +MG GMA + K + +I++Y+
Sbjct: 121 KDRELLVNFTVVEDELKLIDKKYYDVIRDITVKMGNGMADYAIKTQDTANCINTIEEYEL 180
Query: 168 YCYYVAGLVGLGLSKLFYASG--TEDLAPD-SLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YC+YVAG+VG GL++LF L L+ SMG FLQKTNIIRD ED ++
Sbjct: 181 YCHYVAGIVGEGLTRLFLEGNLCNPKLGERMELTESMGQFLQKTNIIRDVREDYDDK--- 237
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
R +WPREIWSKY +D+ EN +AV +DMV NAL HVEDC+ YM+ +RD + F
Sbjct: 238 RSWWPREIWSKYFENYDDIFKPENRQQAVYLCSDMVLNALKHVEDCIYYMAGMRDQSCFN 297
Query: 285 FCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILK 343
F AIPQ MAI TL L + N VF +K+ +G + + T N+ + + ++ +
Sbjct: 298 FVAIPQGMAIATLELVFQNPAVFDRNIKITKGDACSIMLSSTQNLRVLCDVYRTYARRIH 357
Query: 344 PKINKNDPNATKTLSRVEAIQK 365
K + DPN K + I++
Sbjct: 358 KKNDPRDPNYAKISMQCAKIEQ 379
>gi|443917172|gb|ELU37966.1| squalene synthase [Rhizoctonia solani AG-1 IA]
Length = 525
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 213/416 (51%), Gaps = 70/416 (16%)
Query: 10 HPDDLYPLLKLKM---------ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
HP++ L++ K+ A R+ E C+ L SRSFA VI++L
Sbjct: 13 HPNEFRSLIQYKIWHEAKRDITAQREHETSGWDRESMRKCWEFLDMTSRSFAAVIKELEG 72
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVL 118
D+ VC+FYLVLR LDT+EDD +IP + K +L +FH+ + W F S ++ + L
Sbjct: 73 DMARMVCMFYLVLRGLDTIEDDMTIPDEKKQVLLRSFHQKLSTPGWTFKESGPDEKDRQL 132
Query: 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------------------VE 160
+ +F HV L Y++ I DI ++M GMA + + +E
Sbjct: 133 LIEFDHVIAEMALLKPEYREIITDICQKMQIGMADYAHRTELVQSYDPHSGLPKPSPYLE 192
Query: 161 SIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGLFLQKTNIIRDYLED 217
++ +YD YC+YVAGLVG GLS+LF ASG E L +LSNSMGL LQKTNI+RD ED
Sbjct: 193 NVAEYDLYCHYVAGLVGEGLSRLFAASGKEVPWLGEQLTLSNSMGLLLQKTNILRDLRED 252
Query: 218 INEIPKCRMFWPREIWSKY---------------VNKLEDLKY-------------EENS 249
+++ R FWPRE W Y + EDL +
Sbjct: 253 VDQ---GRYFWPREFWGVYQGSEKSRPPKGGWHGFSTPEDLVRAVGPVGPVIPSGDNTPA 309
Query: 250 DKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRG 309
D+A+ L+ M +AL H D L Y++ L++ ++F FCAIP +MA+ TL +C+ N +VFR
Sbjct: 310 DRAMFALSSMTLDALRHATDALDYLALLKNQSVFNFCAIPAVMALATLEVCFMNPDVFRK 369
Query: 310 VVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK---TLSRVEA 362
VK+R+G + + N DV F DF+ + K + DPN + R+EA
Sbjct: 370 NVKIRKGQAVQ----STNPRDVAYMFRDFARGIHAKTSPADPNFLRIGIACGRIEA 421
>gi|378747690|gb|AFC36455.1| squalene synthase, partial [Anoectochilus roxburghii]
Length = 119
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/119 (89%), Positives = 111/119 (93%)
Query: 173 AGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
AGLVGLGLSKLF+AS E+LAPDSLSNSMGLFLQK NIIRDYLEDINEIPK RMFWPR I
Sbjct: 1 AGLVGLGLSKLFHASKLENLAPDSLSNSMGLFLQKINIIRDYLEDINEIPKSRMFWPRHI 60
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
WSKY NKLEDLKYEENS KAVQCLNDMVTNAL+H EDCLKY+SAL+DHAIFRFCAIPQI
Sbjct: 61 WSKYANKLEDLKYEENSVKAVQCLNDMVTNALVHAEDCLKYLSALKDHAIFRFCAIPQI 119
>gi|317027904|ref|XP_001400229.2| squalene synthase [Aspergillus niger CBS 513.88]
Length = 398
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 205/376 (54%), Gaps = 22/376 (5%)
Query: 10 HPDDLYPLLKLKMASRQAEK-QIPPEPHW-AFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP L +LK K+ Q + + E C+ L + RSF+ VI++L +L +C
Sbjct: 13 HPYQLRDILKWKIQHNQIYRLNLGNESESRKVCFKFLDQTGRSFSAVIKELHPELLVPIC 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
IFYLVLR LDT+EDD SI K +L F + W + E K L+ FHHV
Sbjct: 73 IFYLVLRGLDTIEDDPSISVKAKAALLRGFEDVLVKDGWTYDGNRPEEKDRELLVHFHHV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICK---------EVESIDDYDEYCYYVAGLV 176
+ L + I+DIT+ MG GMA F K V +I +YD YCYYVAG V
Sbjct: 133 INEYKALKPACRLIIKDITRVMGNGMADFCHKVTLNNPDKAGVMTIVEYDLYCYYVAGCV 192
Query: 177 GLGLSKLFYAS---GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++ F + + L LS SMG FLQKTNIIRD ED + R FWP++IW
Sbjct: 193 GEGLTRSFIEAQLCNSSLLDYPKLSRSMGAFLQKTNIIRDVSEDHGDH---RCFWPKQIW 249
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKYV+ DL EN + A+ C ++MV NAL H +DCL Y++ L + +IF FCA+PQ MA
Sbjct: 250 SKYVSDFADLFKPENCEAALDCSSEMVLNALEHAKDCLVYLAGLNEQSIFNFCAVPQSMA 309
Query: 294 IGTLALCYNNIEVF-RGV-VKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKND 350
I TL LC+ N +F R V +K+ RG +++ + T + + ++ +K K + +
Sbjct: 310 IATLELCFRNPALFERDVNIKISRGDACQLMFECTQGLPGLCRIVSRYARRIKTKNSLSA 369
Query: 351 PNATKTLSRVEAIQKA 366
N ++ + + I+KA
Sbjct: 370 TNLSEINTVCDTIEKA 385
>gi|74273828|gb|ABA01562.1| squalene synthase [Bupleurum falcatum]
Length = 123
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/120 (85%), Positives = 113/120 (94%)
Query: 87 TDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
++VKVPIL+ FHRH+Y+ WHFSCGTKEYK+LMD+FHHVS AFLELGKGYQ+AIEDIT R
Sbjct: 4 SEVKVPILMEFHRHIYNNSWHFSCGTKEYKILMDEFHHVSNAFLELGKGYQEAIEDITMR 63
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
MGAGMAKFICKEVESIDDYDEYC+YVAGLVGLGLSKLF+ASG EDLA D+LSNSMGLFLQ
Sbjct: 64 MGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDALSNSMGLFLQ 123
>gi|393243802|gb|EJD51316.1| squalene synthase [Auricularia delicata TFB-10046 SS5]
Length = 487
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 133/334 (39%), Positives = 191/334 (57%), Gaps = 23/334 (6%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L RSFA VI++L DL +C+FYLVLR LDT+EDD ++P +VK P+L F
Sbjct: 52 CWKHLDNSGRSFAAVIKELDGDLARVICLFYLVLRGLDTIEDDMTLPDEVKQPLLRDFVN 111
Query: 100 HVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
W F S ++ + L+ +F +V L L + Y+ I DI +M GMA + K
Sbjct: 112 KCVTPGWTFHDSGPDEKDRQLLVEFDNVVAELLMLPEEYRIVILDICAKMAKGMAIYAHK 171
Query: 158 -------EVESIDD---YDEYCYYVAGLVGLGLSKLFYASGTEDLAPD-----SLSNSMG 202
E S+ D D YC+YVAG+VG G S+LF S T+ AP +LSNSMG
Sbjct: 172 AALASSPEELSVQDGTALDLYCHYVAGIVGEGTSRLF--SATQKEAPHIADELALSNSMG 229
Query: 203 LFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY-VNKLEDLKYEENSDKAVQCLNDMVT 261
L LQKTNI+RD+ ED++ R FWPR W+++ ++ ++A+ L++MV
Sbjct: 230 LMLQKTNIMRDFREDVDAR---RYFWPRAFWARHGFAHPREMCDPAVGERALWVLSEMVL 286
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL H EDCL Y++ LR+ ++F FCAIPQ MA+ TLA C+ N VF VK+R+ ++
Sbjct: 287 DALRHAEDCLDYLALLRNGSVFAFCAIPQAMAMATLAECFMNGAVFARNVKIRKAAALEL 346
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
I R+ + DV F D++ + K DP+ K
Sbjct: 347 IMRSTSARDVAYRFRDYARAIHAKAVPADPSYVK 380
>gi|134057162|emb|CAK48765.1| unnamed protein product [Aspergillus niger]
Length = 390
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 182/325 (56%), Gaps = 21/325 (6%)
Query: 10 HPDDLYPLLKLKMASRQAEK-QIPPEPHW-AFCYSMLHKVSRSFALVIQQLGTDLRNAVC 67
HP L +LK K+ Q + + E C+ L + RSF+ VI++L +L +C
Sbjct: 13 HPYQLRDILKWKIQHNQIYRLNLGNESESRKVCFKFLDQTGRSFSAVIKELHPELLVPIC 72
Query: 68 IFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK--VLMDQFHHV 125
IFYLVLR LDT+EDD SI K +L F + W + E K L+ FHHV
Sbjct: 73 IFYLVLRGLDTIEDDPSISVKAKAALLRGFEDVLVKDGWTYDGNRPEEKDRELLVHFHHV 132
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICK---------EVESIDDYDEYCYYVAGLV 176
+ L + I+DIT+ MG GMA F K V +I +YD YCYYVAG V
Sbjct: 133 INEYKALKPACRLIIKDITRVMGNGMADFCHKVTLNNPDKAGVMTIVEYDLYCYYVAGCV 192
Query: 177 GLGLSKLFYAS---GTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G GL++ F + + L LS SMG FLQKTNIIRD ED + R FWP++IW
Sbjct: 193 GEGLTRSFIEAQLCNSSLLDYPKLSRSMGAFLQKTNIIRDVSEDHGDH---RCFWPKQIW 249
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
SKYV+ DL EN + A+ C ++MV NAL H +DCL Y++ L + +IF FCA+PQ MA
Sbjct: 250 SKYVSDFADLFKPENCEAALDCSSEMVLNALEHAKDCLVYLAGLNEQSIFNFCAVPQSMA 309
Query: 294 IGTLALCYNNIEVF-RGV-VKMRRG 316
I TL LC+ N +F R V +K+ RG
Sbjct: 310 IATLELCFRNPALFERDVNIKISRG 334
>gi|387234072|gb|AFJ73937.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 214
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 144/201 (71%), Gaps = 5/201 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 15 FCYDILQAVSRSFAIVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPIDFKLRELPKFH 74
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 75 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 134
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL-APDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 135 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRIADDLTNANHMGLFLQKTNIIRDF 194
Query: 215 LEDINEIPKCRMFWPREIWSK 235
EDI E+P R+FWPREIW K
Sbjct: 195 YEDIREVPP-RVFWPREIWEK 214
>gi|429847663|gb|ELA23243.1| squalene synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 459
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 207/379 (54%), Gaps = 23/379 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPP--EPHWAFCYSMLHKVSRSFALVIQQL 58
MG+L VL HP+ L +++ K+ ++ P +P C+ L+K + VIQ+L
Sbjct: 1 MGALYYVL-HPNQLRSIIQWKVWHEPVHRRDPSKEDPTLRSCFEFLNKTT-----VIQEL 54
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK-- 116
+L V +FYLVLR LDT+EDD +I K P+L F + W F+ K
Sbjct: 55 NPELLVPVALFYLVLRGLDTIEDDMTIDIKEKEPLLRKFDTLMETDGWTFTGNGPNEKDR 114
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI------CKEVESIDDYDEYCY 170
L+ F + +L K Y + I+DIT +MG GMA + +I +Y+ YC+
Sbjct: 115 ELLVHFDDIIVELKKLKKPYYEIIKDITIKMGNGMADYALDTELNANGTNTIKEYELYCH 174
Query: 171 YVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
YVAGLVG GL++LF + L L+ SMG FLQKTNIIRD ED + R +
Sbjct: 175 YVAGLVGDGLTRLFVEGDLANPKLLERPELTESMGQFLQKTNIIRDIHEDYLD---KRAW 231
Query: 228 WPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA 287
WP+EIWSK+V+K EDL E +A++C ++MV NAL H E+C+ YM+ +RD ++F F A
Sbjct: 232 WPKEIWSKHVDKWEDLFKPEYQRQALECSSEMVLNALKHAEECIFYMAGIRDQSVFNFVA 291
Query: 288 IPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKI 346
IPQ MAI TL L + N +F +K+ +G +++ + T N+ V F + + K
Sbjct: 292 IPQSMAIATLELVFRNPAIFNSHIKITKGDACQLMSESTQNLMVVCDVFRRYVRRIHKKN 351
Query: 347 NKNDPNATKTLSRVEAIQK 365
+ DPN + + I++
Sbjct: 352 DPRDPNYVQISVQCAKIEQ 370
>gi|387234076|gb|AFJ73939.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 215
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 142/199 (71%), Gaps = 5/199 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L +R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 18 FCYDILQAVSRSFAVVIMELDEKMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 77
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 78 EHLHDTTWXMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 137
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 138 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 197
Query: 215 LEDINEIPKCRMFWPREIW 233
EDI E+P R+FWPREIW
Sbjct: 198 YEDIREVPP-RVFWPREIW 215
>gi|387234068|gb|AFJ73935.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 213
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 144/200 (72%), Gaps = 5/200 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 15 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 74
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM +F+ +
Sbjct: 75 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDIISGICERMANGMCEFLTR 134
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 135 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 194
Query: 215 LEDINEIPKCRMFWPREIWS 234
EDI E+P R+FWPREIW
Sbjct: 195 YEDICEVPP-RVFWPREIWE 213
>gi|346971705|gb|EGY15157.1| squalene synthetase [Verticillium dahliae VdLs.17]
Length = 446
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 195/359 (54%), Gaps = 32/359 (8%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQL 58
MG+L HP+ L +++ KM ++ P + P C+ +L SRSF+ VIQ+L
Sbjct: 1 MGALYYAF-HPNQLRSIIQWKMWHDPVHRRTPEKESPELRKCFELLDLTSRSFSSVIQEL 59
Query: 59 GTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYK 116
+L VC+FYL LR LDT+EDD ++ + KVP+L F + W F S ++ +
Sbjct: 60 NPELLVPVCLFYLCLRGLDTIEDDMTLSVEKKVPLLRKFDECMETDGWTFTESGPNEKDR 119
Query: 117 VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE--VESIDDYDEYCYYVAG 174
L+ F V T +L Y D I+DIT +MG GMA +I E + +++ YC+Y
Sbjct: 120 ELLVHFDVVITELKKLKPVYYDVIKDITIKMGNGMADYINAPFGAEKVTEHELYCHYER- 178
Query: 175 LVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 234
+ L+ SMG FLQKTNIIRD ED + R FWP+EIWS
Sbjct: 179 --------------------EELTESMGQFLQKTNIIRDVHEDFED---NRSFWPKEIWS 215
Query: 235 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 294
K+V+ EDL EN +KA+QC ++MV NAL H EDCL YM+ +RD + F F AIPQ MAI
Sbjct: 216 KHVDTWEDLFKPENREKAMQCSSEMVLNALKHAEDCLFYMAGMRDQSCFNFVAIPQSMAI 275
Query: 295 GTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
+L L + N +F +K+ +G ++ I+ T N+ V F + + K + DPN
Sbjct: 276 ASLELVFRNPRLFDSHLKISKGDACQLMIESTQNLFVVCDIFKRYVRRIHKKNDPRDPN 334
>gi|387234092|gb|AFJ73947.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 219
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
Query: 19 KLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALD 77
++K R+ E I + FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALD
Sbjct: 1 RMKWRLRRIETGIACNDEDLRFCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALD 60
Query: 78 TVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGY 136
TVEDD SIP D K+ L FH H++D W S G + L++++ HV+ A+ LGK Y
Sbjct: 61 TVEDDMSIPVDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAY 120
Query: 137 QDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PD 195
QD I I +RM GM F+ ++VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D
Sbjct: 121 QDVISGICERMANGMCDFLTRKVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLAD 180
Query: 196 SLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW
Sbjct: 181 DLTNANHMGLFLQKTNIIRDFYEDICEVPP-RVFWPREIW 219
>gi|387234104|gb|AFJ73953.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 219
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
Query: 19 KLKMASRQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALD 77
++K R+ E I + FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALD
Sbjct: 1 RMKWRLRRIEXGIACNDEDLRFCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALD 60
Query: 78 TVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGY 136
TVEDD SIP D K+ L FH H++D W S G + L++++ HV+ A+ LGK Y
Sbjct: 61 TVEDDMSIPVDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAY 120
Query: 137 QDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PD 195
QD I I +RM GM F+ ++VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D
Sbjct: 121 QDXISGICERMANGMCDFLTRKVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLAD 180
Query: 196 SLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW
Sbjct: 181 DLTNANHMGLFLQKTNIIRDFYEDIXEVPP-RVFWPREIW 219
>gi|387234064|gb|AFJ73933.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 215
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 142/200 (71%), Gaps = 5/200 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L +R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 17 FCYDILQAVSRSFAVVIMELDEKMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 76
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 77 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 136
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 137 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 196
Query: 215 LEDINEIPKCRMFWPREIWS 234
EDI E+P R+FWPREIW
Sbjct: 197 YEDIREVPP-RVFWPREIWE 215
>gi|387234080|gb|AFJ73941.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 213
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 143/199 (71%), Gaps = 5/199 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 16 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 75
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 76 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 135
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 136 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 195
Query: 215 LEDINEIPKCRMFWPREIW 233
EDI E+P R+FWPREIW
Sbjct: 196 YEDICEVPP-RVFWPREIW 213
>gi|307111654|gb|EFN59888.1| hypothetical protein CHLNCDRAFT_18492 [Chlorella variabilis]
Length = 261
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MG L +L HPD+L P+ + MA+R+A KQ+P EP AFCY ML++VSRSFA+VIQQL
Sbjct: 1 MGKLGELLTHPDELVPMASMFMAARRA-KQLPQEPGLAFCYDMLNRVSRSFAIVIQQLPH 59
Query: 61 DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD 120
LR+AVC+FYLVLRALDTVEDD + VKVP+L FH YDR W SCG+ EY LM+
Sbjct: 60 GLRDAVCVFYLVLRALDTVEDDMGLDPKVKVPLLRCFHEKSYDRSWKMSCGSGEYVRLME 119
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
+ V+ F L K YQ I DI K+MGAGMA F+ + ++DY+ YC+YVAGLVG+GL
Sbjct: 120 NYPLVTDVFQGLDKRYQQVIADICKKMGAGMADFVTADAADVEDYNLYCHYVAGLVGIGL 179
Query: 181 SKLFYASG 188
S LF +SG
Sbjct: 180 SHLFASSG 187
>gi|189026973|emb|CAQ55982.1| squalene synthase [Aphanomyces euteiches]
Length = 326
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 175/287 (60%), Gaps = 13/287 (4%)
Query: 87 TDVKVPILIAFHRHVYDREWHF-SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
+ K+ +L F+ + D + G + L++Q ++ +F L K +Q+ I DITK
Sbjct: 2 SKTKIKMLQEFYLKLNDTDLSIHGIGEGDEATLLEQAAIMNRSFASLPKDHQEIIADITK 61
Query: 146 RMGAGMAKFI----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN-- 199
+MGAGMA+F+ + DYD+YCYYVAGLVG GLS+LF ASG E + L+
Sbjct: 62 KMGAGMAEFVEVDMGQGTVRTADYDKYCYYVAGLVGEGLSRLFSASGLESPSVGKLTGLS 121
Query: 200 -SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLND 258
SMG FLQK NIIRDYLED E R FWP+EIW K++ L D++ + ++ CLN+
Sbjct: 122 ISMGSFLQKVNIIRDYLEDFVE---GRTFWPQEIWKKHMGNLGDMRDPAKEEASLACLNE 178
Query: 259 MVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLT 318
MV +AL H+ DC++Y+ + +F FCA+PQ+MA+ TLA YNN +VF GVVK+R+G
Sbjct: 179 MVFDALRHIPDCMEYLGGIHHPDVFFFCAMPQVMAVATLAKLYNNPKVFTGVVKVRKGTA 238
Query: 319 AKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSR-VEAIQ 364
A +++ + M V F ++ +++ K+ K+ P L+R +EAI
Sbjct: 239 AFLMEHSTTMPKVRGLFSNYIQVIQSKV-KHTPERKAVLTRALEAIH 284
>gi|348658740|gb|AEP82679.1| farnesyltransferase, partial [Trypanosoma cruzi]
Length = 212
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 142/198 (71%), Gaps = 5/198 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 16 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 75
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 76 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 135
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 136 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 195
Query: 215 LEDINEIPKCRMFWPREI 232
EDI E+P R+FWPREI
Sbjct: 196 YEDIXEVPP-RVFWPREI 212
>gi|387234116|gb|AFJ73959.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 212
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 141/197 (71%), Gaps = 5/197 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 17 FCYDILQAVSRSFAIVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPXDFKLRELPKFH 76
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 77 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 136
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL-APDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 137 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRIADDLTNANHMGLFLQKTNIIRDF 196
Query: 215 LEDINEIPKCRMFWPRE 231
EDI E+P R+FWPRE
Sbjct: 197 YEDIREVPP-RVFWPRE 212
>gi|387234112|gb|AFJ73957.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 211
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 141/197 (71%), Gaps = 5/197 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 16 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 75
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 76 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 135
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 136 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 195
Query: 215 LEDINEIPKCRMFWPRE 231
EDI E+P R+FWPRE
Sbjct: 196 YEDIXEVPP-RVFWPRE 211
>gi|387234108|gb|AFJ73955.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 213
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 141/197 (71%), Gaps = 5/197 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 18 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 77
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 78 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 137
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 138 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 197
Query: 215 LEDINEIPKCRMFWPRE 231
EDI E+P R+FWPRE
Sbjct: 198 YEDICEVPP-RVFWPRE 213
>gi|387234088|gb|AFJ73945.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 209
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 141/197 (71%), Gaps = 5/197 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 14 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 73
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 74 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSXLGKAYQDIISGICERMANGMCDFLTR 133
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 134 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 193
Query: 215 LEDINEIPKCRMFWPRE 231
EDI E+P R+FWPRE
Sbjct: 194 YEDIREVPP-RVFWPRE 209
>gi|387234120|gb|AFJ73961.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 210
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 141/197 (71%), Gaps = 5/197 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 15 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 74
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 75 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSXLGKAYQDIISGICERMANGMCDFLTR 134
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 135 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 194
Query: 215 LEDINEIPKCRMFWPRE 231
EDI E+P R+FWPRE
Sbjct: 195 YEDIREVPP-RVFWPRE 210
>gi|258571688|ref|XP_002544647.1| squalene synthetase [Uncinocarpus reesii 1704]
gi|237904917|gb|EEP79318.1| squalene synthetase [Uncinocarpus reesii 1704]
Length = 396
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 171/318 (53%), Gaps = 30/318 (9%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY L SRSF V Q+L +L V +FYLVLR+LDT+EDD +I + K P+L F+
Sbjct: 45 CYRFLALTSRSFVAVCQELHPELLMPVVVFYLVLRSLDTIEDDMTIGIESKEPLLRNFYM 104
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
HV D W F + + + + + KR G++ V
Sbjct: 105 HVGDEGWTFD----------------GSGHRQENGQWHGRLRENGKRNANGLS------V 142
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA----PDSLSNSMGLFLQKTNIIRDYL 215
+I DY+ YC+YVAGLVG GL++LF + D A L SMG LQ+TNIIRD
Sbjct: 143 NTIKDYELYCHYVAGLVGEGLTRLFVQANFVDPALLTHKPELMESMGQLLQQTNIIRDIR 202
Query: 216 EDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMS 275
ED + R FWP+E WSKYV DL +N +KA+QC +++V AL CL+YM+
Sbjct: 203 EDYDSK---RYFWPKEAWSKYVQNFSDLFLPQNREKALQCSSEIVLMALTRAAQCLQYMA 259
Query: 276 ALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLA 334
+R+ + F F AIPQ MAI TL LC+ N VF VK+ RG ++ ++ T + V
Sbjct: 260 GVREQSTFNFVAIPQTMAIATLELCFQNPAVFDRNVKLSRGSACQIMLESTQDFQQVCKV 319
Query: 335 FYDFSNILKPKINKNDPN 352
F ++ ++ K N +DP+
Sbjct: 320 FSRYATRIRRKNNPSDPH 337
>gi|367000659|ref|XP_003685065.1| hypothetical protein TPHA_0C04820 [Tetrapisispora phaffii CBS 4417]
gi|357523362|emb|CCE62631.1| hypothetical protein TPHA_0C04820 [Tetrapisispora phaffii CBS 4417]
Length = 486
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 218/396 (55%), Gaps = 46/396 (11%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKM---------ASRQAEKQI--PPEPHWAFCYSMLHKVSR 49
M + V+ HP + L LK+ + E+ I P + CY +L K S+
Sbjct: 1 MVKITEVICHPIETRSSLLLKLFRCERIYEDVTINVEEDINGKPTKNLVACYELLRKTSK 60
Query: 50 SFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF- 108
SF L+I QL ++RN V I+YLVLRALDT+ED ++ K +L FH + D +
Sbjct: 61 SFYLMILQLHPNIRNIVMIYYLVLRALDTIEDRPNLEATEKTSLLEQFHLQLGDVKAESN 120
Query: 109 ---SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------V 159
S EY ++ +QF V + +L K Y+ I D ++MG GM+K++ E +
Sbjct: 121 EKNSILDGEYSII-NQFQIVLNEYNKLEKFYKVIIRDSAQKMGTGMSKYLFIESDAKDSL 179
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLF------YASGTEDLAPDSLS--NSMGLFLQKTNII 211
++ +Y+EYC+YVAG+VG GLSK+F + + + + L +GLFLQKTNII
Sbjct: 180 NTVKEYNEYCHYVAGVVGEGLSKIFVKLQFNFDNSNHLIINERLKLYEHLGLFLQKTNII 239
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE-----NSDKAVQCLNDMVTNALM- 265
R + +D + K +WPREIW KY++ +D K NS+K + CLN+M+ NA+
Sbjct: 240 RSFHKDYEKYNKS--YWPREIWIKYIDNSKDAKLATIEDLINSNKRIDCLNEMIINAVSD 297
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRG---VVKMRRGLTAKVI 322
H+++ L Y+S + + +IF FCA+PQ+MAI TLA+ YNN +VF +K+R+ T ++
Sbjct: 298 HMKEILLYISLIEEQSIFEFCAVPQVMAIATLAMLYNNDKVFTSDNEQLKIRKTETGYIL 357
Query: 323 DRTNNMTDVYLA--FYDFSNILKPK--INKNDPNAT 354
+ +V A FY S +LK N+ND AT
Sbjct: 358 YNCRTLLNVTTAIKFY-LSQMLKKSKGSNRNDKLAT 392
>gi|260786797|ref|XP_002588443.1| hypothetical protein BRAFLDRAFT_198742 [Branchiostoma floridae]
gi|229273605|gb|EEN44454.1| hypothetical protein BRAFLDRAFT_198742 [Branchiostoma floridae]
Length = 246
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 143/211 (67%), Gaps = 6/211 (2%)
Query: 167 EYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPK 223
+YC+YVAGLVG+GLS+LF S ED + D+ L+NSMGLFLQKTNIIRDYLED +
Sbjct: 1 QYCHYVAGLVGIGLSRLFSGSEFEDELVGEDTDLANSMGLFLQKTNIIRDYLEDQVD--- 57
Query: 224 CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283
R FWPR++WSK+ KL D + E S A+ CLN++VTNAL+HV D LKYMS LR+ ++F
Sbjct: 58 GREFWPRQVWSKHAKKLSDFRQPEMSQNALWCLNELVTNALLHVPDVLKYMSRLRNQSVF 117
Query: 284 RFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILK 343
FCAIPQ+MAI TLA CYNN +VFRGVVK+R+G K++ +M + F +
Sbjct: 118 NFCAIPQVMAIATLARCYNNPKVFRGVVKIRKGEAVKMMIHATSMENFKGIMRPFCEEIF 177
Query: 344 PKINKNDPNATKTLSRVEAIQKACMDSGVLN 374
K+ DP+ + T+ V+ I++ S L+
Sbjct: 178 SKMTLQDPSYSVTMETVDTIRQLTETSHALS 208
>gi|224613318|gb|ACN60238.1| Squalene synthetase [Salmo salar]
Length = 250
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIP 222
D+YC+YVAGLVG+GLS+LF AS ED + D+ L+NSMGLFLQKTNIIRDYLEDI
Sbjct: 1 DQYCHYVAGLVGIGLSQLFSASQLEDPEVGKDTELANSMGLFLQKTNIIRDYLEDIQ--- 57
Query: 223 KCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
R FWP+E WS++ +LEDL + A+ CLN +VT+AL HV D + Y++ LR+ ++
Sbjct: 58 VARAFWPQEAWSQFACRLEDLAEPDQLTSALSCLNLLVTDALRHVPDVITYLARLRNQSV 117
Query: 283 FRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNIL 342
F FCAIPQ+MAI TL+ CYNN +VF+GVVK+R+G ++ + NM V +S +
Sbjct: 118 FNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATNMGAVQSIMAQYSQEM 177
Query: 343 KPKINKNDPNATKTLSRVEAIQKACMDSGVLNKR 376
+++ DP+ KTL + IQ+ + L R
Sbjct: 178 LQRVSLTDPSRDKTLFILGVIQERTLSQATLASR 211
>gi|238506567|ref|XP_002384485.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
flavus NRRL3357]
gi|220689198|gb|EED45549.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
flavus NRRL3357]
Length = 378
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 151/241 (62%), Gaps = 14/241 (5%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L SRSF+ VI++L +L VC+FYLVLR LDT+EDDTSIP K P+L F
Sbjct: 44 CFKFLDLTSRSFSAVIKELHPELLLPVCVFYLVLRGLDTIEDDTSIPLKTKEPMLREFKD 103
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
++ W F E K L+ QFH+V T F + Y++ ++DIT +MG GMA + K
Sbjct: 104 YLEQDGWTFDGNRPEEKDRELLVQFHNVITEFKNMKPAYREIVKDITDKMGNGMADYCRK 163
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED---LAPDSLSNSMGLFLQKT 208
V++I++YD YCYYVAGLVG GL++LF + + L+ L SMGLFLQKT
Sbjct: 164 AEFEDASVKTIEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLSRPRLHKSMGLFLQKT 223
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIRD ED ++ R FWP+EIWSKYV + EDL EN + A+ C ++MV NAL H E
Sbjct: 224 NIIRDVREDHDD---DRHFWPKEIWSKYVTEFEDLFKPENRETALNCGSEMVLNALEHAE 280
Query: 269 D 269
D
Sbjct: 281 D 281
>gi|350634993|gb|EHA23355.1| hypothetical protein ASPNIDRAFT_130900 [Aspergillus niger ATCC
1015]
Length = 373
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 161/293 (54%), Gaps = 28/293 (9%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C+ L + RSF+ VI++L +L +CIFYLVLR LDT+EDD SI K +L F
Sbjct: 46 CFKFLDQTGRSFSAVIKELHPELLVPICIFYLVLRGLDTIEDDPSISVKAKAALLRGFED 105
Query: 100 HVYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+ W + E K L+ FHHV + L + I+DIT+ MG GMA F K
Sbjct: 106 VLVKDGWTYDGNRPEEKDRELLVHFHHVINEYKALKPACRLIIKDITRVMGNGMADFCHK 165
Query: 158 ---------EVESIDDYDEYCYYVAGLVGLGLSKLFYAS---GTEDLAPDSLSNSMGLFL 205
V +I +YD YCYYVAG VG GL++ F + + L LS SMG FL
Sbjct: 166 VTLSNPDKAGVMTIAEYDLYCYYVAGCVGEGLTRFFIEAQLCNSSLLDYPKLSRSMGAFL 225
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALM 265
QKTNIIRD ED + R FWP++IWSKYV+ DL EN + A+ C
Sbjct: 226 QKTNIIRDVSEDHGDH---RCFWPKQIWSKYVSDFADLFKPENCEAALDC---------K 273
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRG--VVKMRRG 316
H +DCL Y++ L + +IF FCA+PQ MAI TL LC+ N +F VK+ RG
Sbjct: 274 HAKDCLVYLAKLNEQSIFNFCAVPQSMAIATLELCFRNPALFEQDVNVKISRG 326
>gi|190405965|gb|EDV09232.1| squalene synthetase [Saccharomyces cerevisiae RM11-1a]
Length = 279
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 168/283 (59%), Gaps = 18/283 (6%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQI---PPEPHWAFCYSMLHKVSRSFALVIQQ 57
MG L + HP ++ LKLK R I P+ C+ +L+ SRSFA VI++
Sbjct: 1 MGKLLQLALHPVEMKAALKLKFC-RTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRE 59
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK- 116
L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K
Sbjct: 60 LHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKD 119
Query: 117 -VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYC 169
++ F + F +L YQ+ I++IT++MG GMA +I E ++++ DYD YC
Sbjct: 120 RAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVYC 179
Query: 170 YYVAGLVGLGLSKLFYAS--GTEDL-APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM 226
+YVAGLVG GL++L + E L + + L SMGLFLQKTNIIRDY ED+ + R
Sbjct: 180 HYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVD---GRS 236
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
FWP+EIWS+Y +L+D EN + C+N +V NAL HV D
Sbjct: 237 FWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVID 279
>gi|387234084|gb|AFJ73943.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 205
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 140/203 (68%), Gaps = 5/203 (2%)
Query: 25 RQAEKQIP-PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDT 83
R+ EK I + FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD
Sbjct: 1 RRIEKGIACNDEDLRFCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDM 60
Query: 84 SIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
SIP D K+ L FH H++D W S G + L++++ HV+ A+ LGK YQD I
Sbjct: 61 SIPVDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDIISG 120
Query: 143 ITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS- 200
I +RM GM F+ ++VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+
Sbjct: 121 ICERMANGMCDFLTRKVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNAN 180
Query: 201 -MGLFLQKTNIIRDYLEDINEIP 222
MGLFLQKTNIIRD+ EDI E+P
Sbjct: 181 HMGLFLQKTNIIRDFYEDIREVP 203
>gi|387234100|gb|AFJ73951.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 210
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 134/188 (71%), Gaps = 4/188 (2%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FCY +L VSRSFA+VI +L ++R+AVCIFYLVLRALDTVEDD SIP D K+ L FH
Sbjct: 19 FCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRELPKFH 78
Query: 99 RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
H++D W S G + L++++ HV+ A+ LGK YQD I I +RM GM F+ +
Sbjct: 79 EHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMCDFLTR 138
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA-PDSLSNS--MGLFLQKTNIIRDY 214
+VE+ DYD YC+YVAGLVG GL+ L+ +SG ED+ D L+N+ MGLFLQKTNIIRD+
Sbjct: 139 KVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTNIIRDF 198
Query: 215 LEDINEIP 222
EDI E+P
Sbjct: 199 YEDIXEVP 206
>gi|403416727|emb|CCM03427.1| predicted protein [Fibroporia radiculosa]
Length = 464
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 201/397 (50%), Gaps = 38/397 (9%)
Query: 4 LAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPH----W-----AFCYSMLHKVSRSFALV 54
++ ++ HP + + LL+ ++ P H W C+ L S++ V
Sbjct: 7 MSLLVTHPLEFFTLLRFRLFYSPKRDITAPSEHAHTGWDRKTMRRCWEFLDMKSKTIGGV 66
Query: 55 IQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTK 113
I+QL D+ +CI+++VLRALD +EDD +IP + K +L +FH + W F+ C
Sbjct: 67 IKQLEGDIARIMCIYWVVLRALDIIEDDMTIPEEKKQYLLRSFHELILVPGWKFTECNPN 126
Query: 114 E-YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-------VESIDDY 165
E + ++ +F V+ L L Y++ I DI +MG GMA + +E+I D+
Sbjct: 127 EKLRCMLVEFDVVNEELLRLDAPYREIIVDIAHKMGTGMADNSQRAAVTGQVYIETIADF 186
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAP-----DSLSNSMGLFLQKTNIIRDYLEDINE 220
D Y YYVAGLVG G++++ SG E AP +L+NSM + + ++IRDY EDI++
Sbjct: 187 DLYSYYVAGLVGEGMNRILAQSGKE--APWLPEQHALTNSMCVLFEYIDVIRDYREDIDD 244
Query: 221 IPKCRMFWPREIWSKYV----------NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
R WPREIW + + +K+E++ N +A+ L+ M+ AL + D
Sbjct: 245 ---QRFLWPREIWGREIYGKTVGRPAFSKMEEMCEPSNRHQALWALSGMIVEALRRIIDT 301
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTD 330
L Y+ L+ +F+F A+P + + +CY NIEVF+ +R+ A + R+ N D
Sbjct: 302 LDYLHLLQGENVFKFFALPHTINFVRMCVCYMNIEVFQKETNIRKAEIASLFMRSMNPKD 361
Query: 331 VYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 367
V + +++ L+ DPN + I+ C
Sbjct: 362 VTGIYREYAGKLRKSAVPEDPNYVDLVVECLKIELWC 398
>gi|238579457|ref|XP_002389063.1| hypothetical protein MPER_11859 [Moniliophthora perniciosa FA553]
gi|215450927|gb|EEB89993.1| hypothetical protein MPER_11859 [Moniliophthora perniciosa FA553]
Length = 387
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 156/290 (53%), Gaps = 25/290 (8%)
Query: 86 PTDVKVPILIAFHRHVYDREWHFS-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDI 143
P K PIL +FH W F+ CG E + L+ ++ V L Y+ I I
Sbjct: 4 PDKKKQPILRSFHELTVKPGWAFTECGPDEKDRQLLVEYDQVIDELNRLAPEYRAVILSI 63
Query: 144 TKRMGAGMAKFICKEVES----------IDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
T +M AGMA F + S I +YD YC+YVAGLVG GLS LF AS E A
Sbjct: 64 THKMAAGMADFAHRAATSPKSTPLYLATIAEYDLYCHYVAGLVGEGLSGLFSASKKE--A 121
Query: 194 P-----DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK---Y 245
P LSNS+GL LQKTNIIRDY ED E R FWPREIW + K +D+K
Sbjct: 122 PWLADQLELSNSLGLLLQKTNIIRDYREDAEE---GRYFWPREIWGQKKYKFKDMKDMYA 178
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
E ++A ++M+ +A+ H+ D L Y+ L++ ++F FCAIP MAI TL LC+ N E
Sbjct: 179 PEAKERAQWVQSEMILDAMRHLTDGLDYLRLLKNQSVFVFCAIPASMAIATLELCFMNPE 238
Query: 306 VFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 355
+F+ +K+R+ A +I R+ N DV F + + K + DPN K
Sbjct: 239 MFQRNIKIRKAAAADLIMRSTNPRDVAGIFRTYCRKIHAKASPADPNFLK 288
>gi|302409798|ref|XP_003002733.1| squalene synthetase [Verticillium albo-atrum VaMs.102]
gi|261358766|gb|EEY21194.1| squalene synthetase [Verticillium albo-atrum VaMs.102]
Length = 366
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 146/242 (60%), Gaps = 11/242 (4%)
Query: 118 LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE--VESIDDYDEYCYYVAGL 175
L+ F V T +L Y D I+DIT +MG GMA +I VE I +Y+ YC+YVAGL
Sbjct: 17 LLVHFDVVITELKKLKPVYYDVIKDITIKMGNGMADYINAPFGVEKITEYELYCHYVAGL 76
Query: 176 VGLGLSKLFY----ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
VG GL+KLF A+ + P+ L+ SMG FLQKTNIIRD ED + R FWP+E
Sbjct: 77 VGEGLTKLFVRGNLANPRLEERPE-LTESMGQFLQKTNIIRDVHEDFED---NRSFWPKE 132
Query: 232 IWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQI 291
IWSK+VN EDL EN +KA+QC ++MV NAL H EDCL YM+ +RD + F F AIPQ
Sbjct: 133 IWSKHVNTWEDLFKPENREKAMQCSSEMVLNALKHAEDCLFYMAGMRDQSCFNFVAIPQS 192
Query: 292 MAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMTDVYLAFYDFSNILKPKINKND 350
MAI L L + N +F +K+ +G ++ I+ T N+ V F + + K + D
Sbjct: 193 MAIANLELVFRNPRLFDSHLKISKGDACQLMIESTQNLFVVCDIFKRYVRRIHKKNDPRD 252
Query: 351 PN 352
PN
Sbjct: 253 PN 254
>gi|194390506|dbj|BAG62012.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 6/177 (3%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121
+RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++
Sbjct: 1 MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSSLYQPDWRFMESKEKDRQVLED 60
Query: 122 FHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLS 181
F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+GLS
Sbjct: 61 FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120
Query: 182 KLFYASGTED--LAPDS-LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
+LF AS ED + D+ +NSMGLFLQKTNIIRDYLED R FWP+E+WS+
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSR 174
>gi|238589699|ref|XP_002392097.1| hypothetical protein MPER_08376 [Moniliophthora perniciosa FA553]
gi|215457676|gb|EEB93027.1| hypothetical protein MPER_08376 [Moniliophthora perniciosa FA553]
Length = 275
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 18/262 (6%)
Query: 106 WHFS-CGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE----- 158
W F+ CG E + L+ ++ V T L + Y+ I DIT++M GMA F K
Sbjct: 7 WTFTECGPDEKDRQLLVEYDKVITELNLLPEEYRQVILDITEKMARGMADFAHKAATTSA 66
Query: 159 --VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL---APDSLSNSMGLFLQKTNIIRD 213
+E++ DYD YC+YVAGLVG GLS LF AS E LSNS+GL LQKTNIIRD
Sbjct: 67 IYLETVADYDLYCHYVAGLVGEGLSGLFSASKKEAAWIAGQLELSNSLGLLLQKTNIIRD 126
Query: 214 YLEDINEIPKCRMFWPREIWSKY---VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
Y EDI + R FWPREIW ++ ++ EN KA ++MV +A+ H+ D
Sbjct: 127 YREDIEQR---RFFWPREIWGNKEYGFKEMAEMYLPENKQKAQWVQSEMVLDAMRHLTDG 183
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTD 330
L Y+ L++ ++F FCAIP MAI TL LC+ N ++F+ +K+R+ A +I R+ N D
Sbjct: 184 LDYLRLLKNQSVFTFCAIPATMAIATLELCFMNPDMFQRNIKIRKADAASLIMRSTNPRD 243
Query: 331 VYLAFYDFSNILKPKINKNDPN 352
V + F + + + + DPN
Sbjct: 244 VAVIFRTYCRKIHARASPADPN 265
>gi|361124735|gb|EHK96808.1| putative squalene synthase [Glarea lozoyensis 74030]
Length = 1188
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 158/283 (55%), Gaps = 38/283 (13%)
Query: 103 DREW--HFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE-- 158
DRE HF C KE+K+L Q YQ I + TK+MG GMA +
Sbjct: 15 DRELLVHFDCVLKEFKLLKPQ--------------YQKVISEYTKKMGNGMADYANNAEH 60
Query: 159 ----VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA----PDSLSNSMGLFLQKTNI 210
V+S DY+ YC+YVAGLVG GL++LF + + A P+ LS SMG FLQKTNI
Sbjct: 61 NIHGVQSTKDYELYCHYVAGLVGAGLTRLFVDAELANPALLKRPE-LSESMGQFLQKTNI 119
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
IRD ED ++ R F+P+EIWSK+V+ +DL N DKA+ ++MV NAL +V C
Sbjct: 120 IRDLREDFDD---KRRFYPKEIWSKHVDNFDDLFVPANIDKALATTSEMVLNALDNVPQC 176
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV-IDRTNNMT 329
L YM+ ++D ++F F AIPQ+MAI TL + N +V GVVK+ +G K+ ++ + N+
Sbjct: 177 LFYMAGIKDQSVFNFVAIPQVMAIATLEAVFRNPKVTTGVVKITKGDACKLMMESSQNLR 236
Query: 330 DVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGV 372
V F ++ + K DPN + I AC SG+
Sbjct: 237 TVCDIFQRYTRRIHKKNTPKDPNFLE-------ISIACGQSGI 272
>gi|194377082|dbj|BAG63102.1| unnamed protein product [Homo sapiens]
Length = 250
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 120/186 (64%), Gaps = 6/186 (3%)
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
+NSMGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN
Sbjct: 37 ANSMGLFLQKTNIIRDYLEDQQ---GGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLN 93
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGL 317
+++TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 94 ELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQ 153
Query: 318 TAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRF 377
++ NM V Y + + +I +DP+++KT + I+ + + L R
Sbjct: 154 AVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRS 213
Query: 378 KILHYS 383
HYS
Sbjct: 214 ---HYS 216
>gi|403416733|emb|CCM03433.1| predicted protein [Fibroporia radiculosa]
Length = 401
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 169/299 (56%), Gaps = 25/299 (8%)
Query: 76 LDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELG 133
+DT+EDD +I TDVK +L +FH + W F S ++ + ++ +FH + L L
Sbjct: 1 MDTIEDDMTISTDVKQHLLRSFHESMLVAGWSFTGSGPNEKMRQMLVEFHVIHAELLLLE 60
Query: 134 KGYQDAIEDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYA 186
+ + + I DIT++MG GMA + + +ESI D+D YC+Y AGLVG GL+++F
Sbjct: 61 ESHLEIIVDITRKMGNGMADYSRRAAVTGQLCIESIIDFDLYCHYAAGLVGEGLTRMFAQ 120
Query: 187 SGTEDLAPD---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV------ 237
G + P +L+NS GLF+QK +IIRD+ EDI E R FWP+EIW + V
Sbjct: 121 PGKDQPLPAELLALANSAGLFVQKVDIIRDFREDIEE---QRCFWPKEIWGREVYGIALG 177
Query: 238 ----NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMA 293
++E++ EN +A+ L+ M+ +AL HV D L Y+ ++ +F F A+PQI++
Sbjct: 178 RPAFTRMEEMYQPENEHQALWALSGMIVDALKHVLDILDYIHLVQQTQMFEFFALPQIIS 237
Query: 294 IGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPN 352
I L CY N +F G + R TA ++ ++++ + V F + L+ KI DPN
Sbjct: 238 IARLNRCYMNSTIFHGETDIGRVETAFLVAQSSSSSAVVHVFRKYVRELRNKIVPEDPN 296
>gi|28864259|gb|AAO48602.1| ERG9 [Clavispora lusitaniae]
Length = 209
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 130/203 (64%), Gaps = 16/203 (7%)
Query: 104 REWHFSCG--TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE--- 158
++W+F ++ ++++ +FHH+ T F +L YQD ++ ITK+MG GMA +I E
Sbjct: 10 KDWNFDGNGPNEKDRIVLVEFHHILTEFHKLRPEYQDIVKKITKKMGNGMADYILDENFN 69
Query: 159 ---VESIDDYDEYCYYVAGLVGLGLSKLF----YASGTEDLAPDSLSNSMGLFLQKTNII 211
+E++ D+D YC+YVAGLVG GLS L +A LS SMGLFLQKTNII
Sbjct: 70 TNGLETVKDFDLYCHYVAGLVGEGLSDLLVLARFADNQVQAENYRLSESMGLFLQKTNII 129
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHVEDC 270
RDY ED+ + R F+PREIWSKY + L + K E +K V+C+ND+V NAL HV D
Sbjct: 130 RDYHEDLED---GRSFYPREIWSKYTDSLPNFFKKPEEREKGVECINDLVLNALNHVIDV 186
Query: 271 LKYMSALRDHAIFRFCAIPQIMA 293
L Y+S +R+ F FCAIPQ+MA
Sbjct: 187 LTYLSLIRESTSFNFCAIPQVMA 209
>gi|444721055|gb|ELW61809.1| Squalene synthase [Tupaia chinensis]
Length = 280
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 6/151 (3%)
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED--LAPD-SLSNSMGL 203
MG GMA+F+ + V S ++D+YC+YVAGL+G+GLS LF AS ED + D L+NSMGL
Sbjct: 1 MGVGMAEFLDEHVTSEQEWDKYCHYVAGLLGIGLSHLFLASQFEDPLVGEDVELANSMGL 60
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
FLQKT IIRDYLED E R FWP+E+WS+YV KLED EN D AVQCLN++VTNA
Sbjct: 61 FLQKTTIIRDYLEDQRE---GREFWPQEVWSRYVKKLEDFAKPENIDLAVQCLNELVTNA 117
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAI 294
L H+ D L Y+S LR+ ++F FCAIP+ +
Sbjct: 118 LHHIPDVLTYLSRLRNQSVFNFCAIPEQQVV 148
>gi|93008991|gb|ABE97915.1| squalene synthase [Aurantiochytrium limacinum]
Length = 387
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 47/305 (15%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPT-----------DV-------KVPILIAFHRHVYD 103
+R AV IFY+VLRALDTVEDD ++ + DV K +L F + + D
Sbjct: 9 IRLAVGIFYIVLRALDTVEDDMNLSSFDSYVLEEDKKDVEDARSAAKQRLLCQFAQRLSD 68
Query: 104 --------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
+ G + L++ + L + + DIT+ MG GMA ++
Sbjct: 69 SVEGNADKHQPLHGFGEGHERELIENMDAIVYGMSVLPPKLRQVVLDITEEMGVGMAGYV 128
Query: 156 CKEVES----IDDYDEYCYYVAGLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKT 208
+++++ D+++YC+YVAG VG GL+++F + G + ++ L ++MG FLQ+T
Sbjct: 129 SRDLKNGTDDAKDFEQYCHYVAGTVGDGLTRIFASCGYCPADLVSHRELWDAMGSFLQRT 188
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK-----------AVQCLN 257
NIIRDYLED+ + R +WPR +W YV K + ++ + + CLN
Sbjct: 189 NIIRDYLEDLVD---GRAWWPRSVWELYVTKDAEFGRSKSLSRLADSASIEAGLSTSCLN 245
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGL 317
M+ +AL V CL Y+ AL D + FCA+PQ+MAI TL++ ++N +VF+GVVK+R+G
Sbjct: 246 HMIADALEMVGSCLSYLEALNDPDVISFCALPQVMAIATLSVRFDNQKVFQGVVKIRKGQ 305
Query: 318 TAKVI 322
A+++
Sbjct: 306 AARIM 310
>gi|149436729|ref|XP_001513105.1| PREDICTED: squalene synthase-like [Ornithorhynchus anatinus]
Length = 185
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
++NSMGLFLQKTNIIRDYLED E R FWPRE+WS+Y +L D EN D AVQC
Sbjct: 11 QVANSMGLFLQKTNIIRDYLEDQLE---GREFWPREVWSRYAKQLSDFANPENVDLAVQC 67
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRR 315
LN++VTNAL HV D L Y+S LR+ +IF FCAIPQ+MAI TLA CYNN +VFR VVK+R+
Sbjct: 68 LNELVTNALHHVPDVLTYLSRLRNQSIFNFCAIPQVMAIATLAACYNNQQVFRRVVKIRK 127
Query: 316 GLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVL 373
G ++ ++ V + L+ + P +TL+R A +D+ ++
Sbjct: 128 GQAVTLMMGATSLPAVQAIMGQY---LEERTEGPGPLPQRTLARGPLANVATLDNELI 182
>gi|7532841|gb|AAF63255.1| squalene synthase [Botryococcus braunii]
Length = 126
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 3/126 (2%)
Query: 168 YCYYVAGLVGLGLSKLFYASGTEDLA---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YC+YVAG+VGLGLS+LF ASG + + + LSN MGLFLQKTNIIRDY EDINE+P
Sbjct: 1 YCHYVAGVVGLGLSQLFVASGLQSPSLTRSEDLSNHMGLFLQKTNIIRDYFEDINELPAP 60
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR 284
RMFWPREIW KY N L + K N A+ CLN+MVT+AL H CL+YMS + D IF
Sbjct: 61 RMFWPREIWGKYANNLAEFKDPANKAAAMCCLNEMVTDALRHAVYCLQYMSMIEDPQIFN 120
Query: 285 FCAIPQ 290
FCAIPQ
Sbjct: 121 FCAIPQ 126
>gi|313509734|gb|ADR66115.1| squalene synthase, partial [Artemisia campestris]
Length = 106
Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats.
Identities = 75/106 (70%), Positives = 87/106 (82%)
Query: 136 YQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
YQ IED +MG GMAKFI EV++I+DYDEY +YVAGLVG+GLSKLF+ASG E PD
Sbjct: 1 YQKVIEDTVMKMGVGMAKFIRDEVDTINDYDEYSHYVAGLVGIGLSKLFHASGKEISLPD 60
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE 241
+SNSMGLFLQK NIIRD+ EDINE+PK +FWPREIWSKYV+K E
Sbjct: 61 PISNSMGLFLQKANIIRDFHEDINEVPKPLIFWPREIWSKYVDKFE 106
>gi|19550339|gb|AAL91344.1| squalene synthase [Cricetulus griseus]
Length = 175
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 13 DLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCI 68
+ Y LL+ +M R+ Q CY L++ SRSFA VIQ L ++R+AVC+
Sbjct: 1 EFYNLLRFRMGGRRNFITKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEIRHAVCV 60
Query: 69 FYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTA 128
FYLVLRALDTVEDD SI + KVP+L FH +Y+ EW F+ T++ + +++ F +S
Sbjct: 61 FYLVLRALDTVEDDMSISVEKKVPMLRNFHTFLYEPEWRFTESTQKDRQVLEDFPTISLE 120
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL 183
F L + YQ I DI ++MG GMA+F+ K V S D+D+YC+YVAGLVG+GLS+L
Sbjct: 121 FRNLAEKYQTVIADICQKMGCGMAEFVDKHVTSKQDWDKYCHYVAGLVGIGLSRL 175
>gi|348658742|gb|AEP82680.1| farnesyltransferase, partial [Trypanosoma cruzi]
Length = 216
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 186 ASGTEDLA-PDSLSNS--MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
+SG ED+ D L+N+ MGLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L
Sbjct: 2 SSGLEDVRLADDLTNANHMGLFLQKTNIIRDFYEDIXEVPP-RVFWPREIWEKYTDDLHA 60
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYN 302
K E + KAV+CLN MV +AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +N
Sbjct: 61 FKDELHEAKAVECLNAMVADALVHVPHVVEYLASLRDPSVFXFSAIPQVMAMATLSLVFN 120
Query: 303 NIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
N +VF VK RG TA++ + + ++ L ++N D
Sbjct: 121 NKDVFHTKVKTTRGATARIFHYSTELQATLQMLKTYTLRLAARMNAQD 168
>gi|387234098|gb|AFJ73950.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 208
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
+N MGLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN
Sbjct: 9 ANHMGLFLQKTNIIRDFYEDIXEVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLN 67
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGL 317
MV +AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG
Sbjct: 68 AMVADALVHVPHVVEYLASLRDPSVFXFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGA 127
Query: 318 TAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
TA++ + + ++ L ++N D
Sbjct: 128 TARIFHYSTELQATLQMLKTYTLRLAARMNAQD 160
>gi|387234074|gb|AFJ73938.1| squalene synthase, partial [Trypanosoma cruzi]
gi|387234118|gb|AFJ73960.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 196
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFTFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234086|gb|AFJ73944.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 186
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFTFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234066|gb|AFJ73934.1| squalene synthase, partial [Trypanosoma cruzi]
gi|387234078|gb|AFJ73940.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 196
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFAFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234122|gb|AFJ73962.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 188
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFTFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234106|gb|AFJ73954.1| squalene synthase, partial [Trypanosoma cruzi]
gi|387234114|gb|AFJ73958.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 196
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIXEVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFXFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234102|gb|AFJ73952.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 186
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIXEVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFXFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234090|gb|AFJ73946.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 195
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDIREVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVXCLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFTFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|258577377|ref|XP_002542870.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903136|gb|EEP77537.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 308
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 112/186 (60%), Gaps = 7/186 (3%)
Query: 174 GLVGLGLSKLFYASG---TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
GLVG GL++LF +G + L L SMGLFLQKTNIIRD ED ++ R FWP+
Sbjct: 4 GLVGEGLTRLFVEAGFARPQLLERPQLFKSMGLFLQKTNIIRDVREDEDD---NRRFWPK 60
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
EIWSK+V+ EDL EN D A+ C +MV NAL H EDCL Y++ L + ++F F AIPQ
Sbjct: 61 EIWSKHVDNWEDLFKPENRDAALNCSAEMVMNALGHAEDCLFYLAGLTEQSVFNFAAIPQ 120
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVI-DRTNNMTDVYLAFYDFSNILKPKINKN 349
MAI TL LC+ N +F +K+ +G +++ T N+ + F ++ + K +
Sbjct: 121 SMAIATLELCFRNPAMFDRNIKITKGHACQLMWQSTQNVRVICDVFRLYARRIHKKNSPK 180
Query: 350 DPNATK 355
DPN K
Sbjct: 181 DPNFLK 186
>gi|387234070|gb|AFJ73936.1| squalene synthase, partial [Trypanosoma cruzi]
gi|387234082|gb|AFJ73942.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 196
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDICEVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFAFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|387234094|gb|AFJ73948.1| squalene synthase, partial [Trypanosoma cruzi]
gi|387234110|gb|AFJ73956.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 195
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQKTNIIRD+ EDI E+P R+FWPREIW KY + L K E + KAV+CLN MV
Sbjct: 1 GLFLQKTNIIRDFYEDICEVPP-RVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVA 59
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
+AL+HV ++Y+++LRD ++F F AIPQ+MA+ TL+L +NN +VF VK RG TA++
Sbjct: 60 DALVHVPHVVEYLASLRDPSVFAFSAIPQVMAMATLSLVFNNKDVFHTKVKTTRGATARI 119
Query: 322 IDRTNNMTDVYLAFYDFSNILKPKINKND 350
+ + ++ L ++N D
Sbjct: 120 FHYSTELQATLQMLKTYTLRLAARMNAQD 148
>gi|194267466|gb|ACF35716.1| squalene synthase 1 [Glycyrrhiza uralensis]
gi|194267468|gb|ACF35717.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 79
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 71/79 (89%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+ RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIARHPDDVYPLLKLKMAARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTV 79
LRNAVCIFYLVLRALDTV
Sbjct: 61 QLRNAVCIFYLVLRALDTV 79
>gi|194267462|gb|ACF35714.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 79
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 71/79 (89%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL A+ RHPDD+YPLLKLKMA+R AEKQIP EPHWAFCY+ML KVSRSFALVIQQL
Sbjct: 1 MGSLGAIARHPDDVYPLLKLKMAARHAEKQIPXEPHWAFCYTMLLKVSRSFALVIQQLDP 60
Query: 61 DLRNAVCIFYLVLRALDTV 79
LRNAVCIFYLVLRALDTV
Sbjct: 61 QLRNAVCIFYLVLRALDTV 79
>gi|444525950|gb|ELV14227.1| Squalene synthase [Tupaia chinensis]
Length = 348
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQ 290
++WS+YV KLED EN D AVQCLN++VTNAL H+ D L Y+S LR+ ++F FCAIPQ
Sbjct: 165 KVWSRYVKKLEDFAKPENIDLAVQCLNELVTNALHHIPDVLTYLSRLRNQSVFNFCAIPQ 224
Query: 291 IMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKND 350
+MAI TLA CYNN +VF+GVVK+R+G ++ NM V Y + + +I +D
Sbjct: 225 VMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRIPNSD 284
Query: 351 PNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
P+++KT + I+ + + L R HYS
Sbjct: 285 PSSSKTRQIISTIRAQNLPTCQLISRS---HYS 314
>gi|260786803|ref|XP_002588446.1| hypothetical protein BRAFLDRAFT_198828 [Branchiostoma floridae]
gi|229273608|gb|EEN44457.1| hypothetical protein BRAFLDRAFT_198828 [Branchiostoma floridae]
Length = 167
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 106/163 (65%), Gaps = 5/163 (3%)
Query: 10 HPDDLYPLLKLKMA---SRQAEKQIPPE-PHWAFCYSMLHKVSRSFALVIQQLGTDLRNA 65
HP+++Y LLK K+ + QA+ P CY L++ SRSFA V Q L DLR+A
Sbjct: 5 HPEEIYSLLKFKLGGCETVQAKCHYDQMCPSMRTCYQYLNQTSRSFAAVTQALDGDLRDA 64
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHV 125
VCIFYLVLRALDTVEDD +IP D K+ +L +FH ++ D W F ++ K +++ F +
Sbjct: 65 VCIFYLVLRALDTVEDDMTIPLDTKLDMLHSFHTYLQDPAWRFMESNEKDKKVLEDFPTI 124
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESIDDYDE 167
S F +L YQ+ I DI +RMGAGMA+F+ + +V+++ D+D+
Sbjct: 125 SQEFRKLKPLYQEVISDICRRMGAGMAEFVQRSDVDTLADWDK 167
>gi|452825735|gb|EME32730.1| farnesyl-diphosphate farnesyltransferase [Galdieria sulphuraria]
Length = 215
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 89/130 (68%)
Query: 240 LEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLAL 299
LED K +++ + CLN +VT+AL HV DCL+Y++ +D +F F +IPQ+MAI TLA
Sbjct: 3 LEDFKEPVHTEDGLHCLNHLVTDALRHVPDCLEYLAGAKDLKVFNFVSIPQVMAIATLAE 62
Query: 300 CYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSR 359
CYNN +VFRG VK+RRG+TAK++ R+ NM ++Y FY ++ ++ +I DP+A +T
Sbjct: 63 CYNNPQVFRGKVKVRRGITAKLVMRSTNMRNIYKIFYQYAVFMRDRIPVQDPSALQTRQV 122
Query: 360 VEAIQKACMD 369
++ I C+
Sbjct: 123 LDTIIAKCVS 132
>gi|147799480|emb|CAN64028.1| hypothetical protein VITISV_030715 [Vitis vinifera]
Length = 285
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Query: 1 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGT 60
MGSL +L HP D+Y LLKLKMA +KQ+PPEP W FCY++LHK SR F+LV+QQL T
Sbjct: 170 MGSLGEILTHPGDIYLLLKLKMADCHVKKQLPPEPRWVFCYTLLHKASRDFSLVVQQLNT 229
Query: 61 DLRNAVCIFYLVLRALD---TVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGT 112
NA+ I+ + + + PT VK PILIAF+RH+ D WHF+CG
Sbjct: 230 RFYNAIYIYIYFIWSFKHPTLLRMIRVFPTKVKAPILIAFYRHICDCGWHFACGV 284
>gi|426258707|ref|XP_004022949.1| PREDICTED: squalene synthase-like, partial [Ovis aries]
Length = 110
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 71/99 (71%)
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIM 292
WSKYV KL D EN D AVQCLN+++TNAL H+ D + Y+S LR+ +IF FCAIPQ+M
Sbjct: 2 WSKYVKKLGDFAKPENIDFAVQCLNELITNALHHIPDVITYLSRLRNQSIFNFCAIPQVM 61
Query: 293 AIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDV 331
AI TLA CYNN +VF+GVVK+R+G ++ NM V
Sbjct: 62 AIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAV 100
>gi|295656914|ref|XP_002789035.1| squalene synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285031|gb|EEH40597.1| squalene synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 258
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALM 265
QKTNIIRD ED + K R FWP+EIWSK+V++ EDL EN A+ C +M+ NAL
Sbjct: 5 QKTNIIRDVKED--HVDK-RCFWPKEIWSKHVDQFEDLFKPENRTVALNCNAEMILNALD 61
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
H ++CL Y++ L++ +IF FCAIPQ MAI TL LC+ N +F VK+ +G+ +++ ++
Sbjct: 62 HADECLFYLAGLKEQSIFNFCAIPQSMAIATLELCFRNEAIFERNVKITKGIACQLMVQS 121
Query: 326 NNMTDVYL-AFYDFSNILKPKINKNDPNATK 355
V+ F + + K DPN K
Sbjct: 122 TQNVRVFCDVFKLYIRKIHKKNTPKDPNFLK 152
>gi|434381435|ref|YP_006703218.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
WesB]
gi|404430084|emb|CCG56130.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
WesB]
Length = 332
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 47/295 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L VSRSFAL I L + ++ V + YL+ R +DT+ED D + I
Sbjct: 10 LLDLVSRSFALTIPLLDKNKKSKVEVQYLLARIIDTIEDSMHNTNDKETLITGFINILKS 69
Query: 95 --------------IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
I + + D + K+L++ V F G+ I
Sbjct: 70 SSLENIKNLDNFKYIVLEKTINDND----------KILIENIDLVLKTFF----GFDSHI 115
Query: 141 EDIT----KRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS 196
++++ MG GM + + + +D ++YCYYVAG VG+ L++L A L +
Sbjct: 116 KNMSISYLNEMGYGMIYYQDHSINNFEDLNDYCYYVAGTVGVYLTELTRALDNLSLDKEK 175
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
+ G FLQK NII+D D E R+FWP+ +++ N + E DKAV+ L
Sbjct: 176 -AKKFGRFLQKVNIIKDVRNDFKE---NRIFWPKNLFND-DNIASYFQEETYKDKAVEIL 230
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFRG 309
N MV NA+ ED +KY+ + A+ +R FC I +MA TL YNN VF G
Sbjct: 231 NKMVDNAMDDFEDTIKYIMEIEKKAVGYRHFCLIAALMAYKTLKTMYNNYNVFSG 285
>gi|300871426|ref|YP_003786299.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
95/1000]
gi|404475296|ref|YP_006706727.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
B2904]
gi|431807818|ref|YP_007234716.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
P43/6/78]
gi|300689127|gb|ADK31798.1| squalene/phytoene synthase (SQS/PSY)-like protein [Brachyspira
pilosicoli 95/1000]
gi|404436785|gb|AFR69979.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
B2904]
gi|430781177|gb|AGA66461.1| squalene/phytoene synthase-like protein [Brachyspira pilosicoli
P43/6/78]
Length = 332
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 47/295 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L VSRSFAL I L + ++ V + YL+ R +DT+ED D + I
Sbjct: 10 LLDLVSRSFALTIPLLDKNKKSKVEVQYLLARIIDTIEDSMHNTNDKETLITGFINILKS 69
Query: 95 --------------IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
I + + D + K+L++ V F G+ I
Sbjct: 70 SSLENIKNLDNFKYIVLEKTINDND----------KILIENIDLVLKTFF----GFDSHI 115
Query: 141 EDIT----KRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS 196
++++ MG GM + + + +D ++YCYYVAG VG+ L++L A L +
Sbjct: 116 KNMSISYLNEMGYGMIYYQDHSINNFEDLNDYCYYVAGTVGVYLTELTRALDNLSLDKEK 175
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
+ G FLQK NII+D D E R+FWP+ +++ N + E DKA++ L
Sbjct: 176 -AKKFGRFLQKVNIIKDVRNDFKE---NRIFWPKNLFND-DNIASYFQEETYKDKAIEIL 230
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFRG 309
N MV NA+ ED +KY+ + A+ +R FC I +MA TL YNN VF G
Sbjct: 231 NKMVDNAMDDFEDTIKYIMEIEKKAVGYRHFCLIAALMAYKTLKTMYNNYNVFSG 285
>gi|320033290|gb|EFW15238.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 201
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
MG LQ+TNIIRD ED + R FWP E+WSKYV DL +N +KA+QC ++MV
Sbjct: 1 MGQLLQQTNIIRDIREDYDSK---RYFWPEEVWSKYVENFSDLFLPQNREKALQCSSEMV 57
Query: 261 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 320
AL ++CL YM+ + + + F F AIPQ MAI TL LC N +F +K+ RG +
Sbjct: 58 LMALTRADECLSYMAGVMEQSTFNFVAIPQTMAIATLELCLQNPAIFDRNIKISRGSACQ 117
Query: 321 V-IDRTNNMTDVYLAF 335
+ I+ T V AF
Sbjct: 118 IMIESTREFQHVCEAF 133
>gi|387234096|gb|AFJ73949.1| squalene synthase, partial [Trypanosoma cruzi]
Length = 109
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS-CGTKEYKVLMDQFHHV 125
CIFYLVLRALDTVEDD SIP D K+ L FH H++D W S G + L++++ HV
Sbjct: 1 CIFYLVLRALDTVEDDMSIPVDFKLRELPKFHEHLHDTTWCMSGVGVGRERELLERYTHV 60
Query: 126 STAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAG 174
+ A+ LGK YQD I I +RM GM F+ ++VE+ DYD YC+YVAG
Sbjct: 61 TRAYSRLGKAYQDXISGICERMANGMCDFLTRKVETKADYDLYCHYVAG 109
>gi|385799499|ref|YP_005835903.1| squalene/phytoene synthase [Halanaerobium praevalens DSM 2228]
gi|309388863|gb|ADO76743.1| Squalene/phytoene synthase [Halanaerobium praevalens DSM 2228]
Length = 319
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPT-----DVKVPI 93
F +L KVSRSFAL I L ++++ V + YL R LD ED+ P D+ +
Sbjct: 8 FARKILKKVSRSFALTIPMLDKEIQDEVLLTYLQDRILDNFEDEIQPPNFKLQQDLMDRV 67
Query: 94 LIAFHRHVYDREWHFSCGTKEYKVL----MDQFHHVSTAFLELGKGYQDAIEDITKR--- 146
F Y+R F + ++ +++ ++ + + D I+ I+ +
Sbjct: 68 SRIFSTEDYNRNQDFKLIKENSSLIEKADLEKLTRNIDLIYQVYQSFDDQIQKISHKWLE 127
Query: 147 -MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL----FYASGTEDLAPDSLSNSM 201
M GM KF+ KEV + D DEYCYYVAG VG L++ F G + N
Sbjct: 128 EMNQGMQKFLNKEVNTFADLDEYCYYVAGTVGGFLTETIIYKFEIKGEQKKLLKENFNEA 187
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
GLFLQK N+IRD ED+ + + FWP + +DL + +K++ L+ M+
Sbjct: 188 GLFLQKVNLIRDIREDLEN--RNKNFWPLKDLDVTA---KDLIEPQQKEKSMAALSVMLK 242
Query: 262 NALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTLALCYNNIEVFRG 309
+ H+ KY AL + +F A+ + + TL NN +VF G
Sbjct: 243 DLKEHIPALKKYYQALPSELNGYKKFFAVNNSLGLATLEKLENNPKVFYG 292
>gi|261417498|ref|YP_003251181.1| squalene/phytoene synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385789408|ref|YP_005820531.1| squalene/phytoene synthase family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373954|gb|ACX76699.1| Squalene/phytoene synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325382|gb|ADL24583.1| squalene/phytoene synthase family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 360
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 146/337 (43%), Gaps = 42/337 (12%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
EK + + W + +L VSR+FAL IQ L L ++ + YL LR DTVEDD +
Sbjct: 11 GEKVLEGKAAWKYAEDILQLVSRTFALNIQVLRGKLHRSILLAYLYLRIADTVEDDPDMK 70
Query: 87 TDVKVPILIAFHRHVYDRE----------------WHFSCGTKEYKVLMDQFHHVSTAFL 130
K +L F E WH S K L + V
Sbjct: 71 ATEKDRVLALFADVFKTGELETEKIRTFVAALPESWHGS--EDPNKDLCSKSEVVVPLLK 128
Query: 131 ELGKGYQDAIEDITKRMGAGMAKFICKE----------VESIDDYDEYCYYVAGLVGLGL 180
L K YQ + D+ M GMAKF ++ + ++ + DEYCYYVAG+VG L
Sbjct: 129 SLPKNYQKPVCDVVIEMCGGMAKFALRQEAALSAGWFTLANVGELDEYCYYVAGIVGKLL 188
Query: 181 SKLFYA-----SGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSK 235
+KLF A + + L S GL LQ NI++D +ED + F P EI +
Sbjct: 189 TKLFSADTCFINAEREAELSKLDVSFGLALQVVNIVKDCVEDSG---RRVCFIPEEICKR 245
Query: 236 --YVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFR--FCAIPQI 291
+ + E ++ K L+++V A H++D + Y + + + FC P
Sbjct: 246 HGFAHPSELFAAGADAQKCGAVLSELVEKAWHHLDDAIAYTKLIPNIKMRTRLFCLWPLF 305
Query: 292 MAIGTLALCYNNIEVFRG--VVKMRRGLTAKVIDRTN 326
MA L+L N + VF VK+ R +++ T+
Sbjct: 306 MAAENLSLIGNGVSVFTSDKKVKITRDTVKRIVKETS 342
>gi|296125938|ref|YP_003633190.1| squalene/phytoene synthase [Brachyspira murdochii DSM 12563]
gi|296017754|gb|ADG70991.1| Squalene/phytoene synthase [Brachyspira murdochii DSM 12563]
Length = 330
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 31/298 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI--------- 93
+L VSRSFAL I L + +N V + YL+ R +DT+ED + D + I
Sbjct: 11 LLDLVSRSFALTIPLLDKNKKNKVEVQYLLARIIDTIEDSSHTAQDKETLITGFINILKS 70
Query: 94 -----LIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMG 148
L F + V D + + K+L++ V AF + ++ + MG
Sbjct: 71 ENTDNLENFKKVVIDHTIN-----ENDKILIENIEVVLKAFFAFKQEIKNMSVSYLREMG 125
Query: 149 AGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKT 208
GM + + + +D D+YCYYVAG VG+ L++L +L + + S+G FLQK
Sbjct: 126 YGMVYYQDHTISTFEDLDDYCYYVAGTVGVYLTELVKMLDNLELDREK-AKSLGRFLQKV 184
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKY--VNKLEDLKYEENSDKAVQCLNDMVTNALMH 266
NII+D D E R+FWP ++ ED Y DK+++ L+ M+ +A+
Sbjct: 185 NIIKDAKIDYKE---KRVFWPLTLFDNENPAPYFEDGAY---MDKSMEILSKMIESAMHE 238
Query: 267 VEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFRG-VVKMRRGLTAKV 321
++ ++Y+ + ++ +R FC + +M T+ L NN +F G +K+ R T ++
Sbjct: 239 FKNSIEYIMTIEKKSLGYRHFCLLTTLMGYETIKLMKNNYNIFMGETIKIPRKTTLEI 296
>gi|220932428|ref|YP_002509336.1| squalene synthase [Halothermothrix orenii H 168]
gi|219993738|gb|ACL70341.1| Squalene synthase [Halothermothrix orenii H 168]
Length = 321
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 143/307 (46%), Gaps = 27/307 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED-----DTSIPTDVKVPI 93
FC ML KVSRSFAL I L L V YL R LD ED D D+ +
Sbjct: 7 FCKKMLPKVSRSFALTIPLLDDKLYMPVLTVYLQDRLLDNFEDEVKGIDIDTRKDLMDSV 66
Query: 94 LIAFH------RHVYDREWHFS--CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
+ F ++ +R +S + + L + H + + L Q
Sbjct: 67 VALFDPDNEGTNYICNRLKGYSDYIPDNDLQALTEGCHLLKEVYQNLPHKVQRLSFKWLN 126
Query: 146 RMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASG---TEDLAPDSLSN--S 200
M GM K++ ++++ ++ DEYCYYVAG VG L++L G D L N
Sbjct: 127 EMNEGMKKYLTLKIKTFEELDEYCYYVAGTVGGFLTELVLLYGDIHDHKQKEDLLENFTE 186
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
GLFLQK NIIRD D+ E + + FWP E K+ + Y+E++ +A++ M+
Sbjct: 187 AGLFLQKINIIRDIKIDLEE--RNKSFWPMEELGLSDEKILNPDYKEDASRALRV---ML 241
Query: 261 TNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIEVF--RGVVKMRRG 316
+NA H+E Y A+ D+ +F ++ + I TL N+++F RG VK+ +
Sbjct: 242 SNAKGHIEGLATYFEAIPDNLPGYRKFFSVNNALGIATLEELEGNLKLFYGRGKVKVSKM 301
Query: 317 LTAKVID 323
K+++
Sbjct: 302 KFLKILN 308
>gi|429190091|ref|YP_007175769.1| phytoene/squalene synthetase [Natronobacterium gregoryi SP2]
gi|448325999|ref|ZP_21515372.1| Squalene/phytoene synthase [Natronobacterium gregoryi SP2]
gi|429134309|gb|AFZ71320.1| phytoene/squalene synthetase [Natronobacterium gregoryi SP2]
gi|445613510|gb|ELY67209.1| Squalene/phytoene synthase [Natronobacterium gregoryi SP2]
Length = 348
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 33/322 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M S Q E + + W CY +H VSR+FA+ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTSGQPEYETDADLEW--CYDAVHGVSRTFAITIDRLEEPMARHICLGYLLCRIADTIED 58
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHFSCGT--------------KEYKVLMDQFHHVST 127
IP + + +L+ + R V D + S T ++ V+ + + T
Sbjct: 59 AGHIPPETQTELLVTYDR-VLDPDTDLSVSTFMDDVSPWIPENCDDDWDVVAETPRVLRT 117
Query: 128 AFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGL 180
F L + ++ + + + + GMA F + ++++D+ +EYC+Y AG VG +
Sbjct: 118 -FESLNEEPREIMREPVRELVDGMAMFTDRYADEGGLRLQTVDELEEYCWYAAGTVGTLI 176
Query: 181 SKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+ L +ED A + +N S L LQ NI +D D +E + ++ P E +
Sbjct: 177 TGLVARGASEDRAQEMRNNARSFALLLQLVNIAKDVENDYHE--ENNVYLPAEWLEEEDV 234
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGT 296
+E + EEN + + A +V+D +Y+ A+ + R AIP ++A+GT
Sbjct: 235 PVEAVTDEENHGAVTNVIQRVTNRAETYVDDAHRYLEAVPERHGNRLSAWAIPYLLAVGT 294
Query: 297 LALCYNNIE--VFRGVVKMRRG 316
+ E V G VK+ R
Sbjct: 295 MRELRERPEDVVQEGDVKVSRA 316
>gi|373456729|ref|ZP_09548496.1| Squalene/phytoene synthase [Caldithrix abyssi DSM 13497]
gi|371718393|gb|EHO40164.1| Squalene/phytoene synthase [Caldithrix abyssi DSM 13497]
Length = 345
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 43/308 (13%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF- 97
+C ++L +VSR+FA I++L LR V + YL+ R DT+ED + D K +L +
Sbjct: 7 YCENVLPRVSRTFAPTIRRLPKGLRLPVTVAYLLCRVADTIEDSPDLTIDQKKHMLTLYA 66
Query: 98 ----------HRHVYDREWHFSCGTKEYK------VLMDQFHHVSTAFLELGKGYQDAIE 141
++ + H T++ K +LMD F S A Q I
Sbjct: 67 NIFAQNDSTAYQQLLALLQHLPQQTEDEKLTHNLPILMDVFRSFSVAM-------QGHIA 119
Query: 142 DITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
M GM K+ + ++S+ + DEY YYVAG VG L++LFY ++ + P
Sbjct: 120 RWVAEMSLGMRKYAQAKQKRRFSFLKSMKELDEYTYYVAGTVGYLLTELFYFYSSK-ITP 178
Query: 195 ------DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
+ L+ S G LQ NIIRD D+ + + + P E+ KY E + +EN
Sbjct: 179 MVKHRLEQLAESFGKGLQLVNIIRDTAADLR---RGQSYIPDELLHKYQLTRESIFKKEN 235
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
+D+A Q N+++ +A+ H++ L Y + + I FC +P A+ TL L N
Sbjct: 236 ADRAQQLFNELIQDAVNHLDKALDYTLTIPKGETRIRLFCILPLFWALRTLELIQRNTLS 295
Query: 307 FRGVVKMR 314
G K++
Sbjct: 296 LLGSEKIK 303
>gi|169235590|ref|YP_001688790.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Halobacterium salinarum R1]
gi|167726656|emb|CAP13442.2| squalene synthase [Halobacterium salinarum R1]
Length = 347
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 148/342 (43%), Gaps = 48/342 (14%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M RQ+ + + W C+S + VSR+FAL I L + +C+ YL+ R DTVED
Sbjct: 1 MDGRQSHQPTASDREW--CHSAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVED 58
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHFSCGT------------------KEYKVLMDQFH 123
T++P + +L YD CGT +++V+ +
Sbjct: 59 ATAMPPTEQAQLL-----ETYDAALDPDCGTTVAEFQAAVGDHVPSEPNADWRVVANTTR 113
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLV 176
VS AF L + AI + M GMA F+ + ++S + +EYC+YVAG V
Sbjct: 114 VVS-AFESLDDAAKAAIRPTVREMATGMASFVQRYADAGGLRIQSPTELEEYCWYVAGTV 172
Query: 177 GLGLSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 234
G +++L D A N S L LQ N+ +D D E + ++ P+E
Sbjct: 173 GELVTELLARDAPSDAAAAMRENARSFALLLQLVNVAKDVRPDYEE--ENNVYLPQEWLD 230
Query: 235 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIM 292
+ ED+ E++ + + + A +V D +++ + A+P ++
Sbjct: 231 DHDLAPEDVADPEHAGRVASVVERVTDRARGYVADAQRWLEVMPTSQGNTLAAWAVPFLL 290
Query: 293 AIGTLALCYNN-IEVFR-GVVKMRR-------GLTAKVIDRT 325
A+GT+ N +V R G VK+ R GL A DR+
Sbjct: 291 AVGTMRELGNRPADVVREGDVKVDREEVHAVIGLVADDFDRS 332
>gi|15789869|ref|NP_279693.1| farnesyl-diphosphate farnesyltransferase [Halobacterium sp. NRC-1]
gi|10580267|gb|AAG19173.1| farnesyl-diphosphate farnesyltransferase [Halobacterium sp. NRC-1]
Length = 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 148/342 (43%), Gaps = 48/342 (14%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M RQ+ + + W C+S + VSR+FAL I L + +C+ YL+ R DTVED
Sbjct: 44 MDGRQSHQPTASDREW--CHSAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVED 101
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHFSCGT------------------KEYKVLMDQFH 123
T++P + +L YD CGT +++V+ +
Sbjct: 102 ATAMPPTEQAQLL-----ETYDAALDPDCGTTVAEFQAAVGDHVPSEPNADWRVVANTTR 156
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLV 176
VS AF L + AI + M GMA F+ + ++S + +EYC+YVAG V
Sbjct: 157 VVS-AFESLDDAAKAAIRPTVREMATGMASFVQRYADAGGLRIQSPTELEEYCWYVAGTV 215
Query: 177 GLGLSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWS 234
G +++L D A N S L LQ N+ +D D E + ++ P+E
Sbjct: 216 GELVTELLARDAPSDAAAAMRENARSFALLLQLVNVAKDVRPDYEE--ENNVYLPQEWLD 273
Query: 235 KYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIM 292
+ ED+ E++ + + + A +V D +++ + A+P ++
Sbjct: 274 DHDLAPEDVADPEHAGRVASVVERVTDRARGYVADAQRWLEVMPTSQGNTLAAWAVPFLL 333
Query: 293 AIGTLALCYNN-IEVFR-GVVKMRR-------GLTAKVIDRT 325
A+GT+ N +V R G VK+ R GL A DR+
Sbjct: 334 AVGTMRELGNRPADVVREGDVKVDREEVHAVIGLVADDFDRS 375
>gi|451979679|ref|ZP_21928092.1| putative Squalene/phytoene synthase [Nitrospina gracilis 3/211]
gi|451763048|emb|CCQ89289.1| putative Squalene/phytoene synthase [Nitrospina gracilis 3/211]
Length = 371
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 31/294 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
W +C ML KVSR+FAL I L DL ++ YL R +DTVED + +K+ +L
Sbjct: 4 WEYCRQMLPKVSRTFALNITVLKDDLHRSILTAYLFCRIVDTVEDAAELDPKIKIRLLQE 63
Query: 97 F--------HRHVYDREWHFSC----GTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDIT 144
F HR W C G++ L+ V F L +Q+ I
Sbjct: 64 FSHIIEDPDHRARNLDRWVEDCRAVDGSENDLDLLINTPRVFNVFDSLPVNHQEQIVPSV 123
Query: 145 KRMGAGMA----KFICKEVE---SIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
RM GMA KF E+ + +EYCY+VAGLVG L LF+ +L+P S
Sbjct: 124 SRMARGMAYFQQKFSFNEITLLEDEHELEEYCYFVAGLVGEMLCNLFFQE-IPNLSPKSR 182
Query: 198 SN------SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
S GL LQ TNI +D + D + + PR +E+ + ++
Sbjct: 183 ETMQRTAVSFGLGLQMTNISKDIIVDRG---RGWSYIPRSYIIGQGLTVEEFNAGTSINQ 239
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTLALCYNN 303
++ + ++ L H+ED L++ A+ + I FC P MA+ T+A+ +NN
Sbjct: 240 NLEVMERLLHKTLGHLEDALRFTLAIPRYQTRIRLFCIWPLWMAMETVAVLHNN 293
>gi|225620218|ref|YP_002721475.1| squalene/phytoene synthase-like protein [Brachyspira hyodysenteriae
WA1]
gi|225215037|gb|ACN83771.1| SQS PSY, Squalene/phytoene synthase-like protein [Brachyspira
hyodysenteriae WA1]
Length = 333
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 25/296 (8%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF----H 98
+L VSRSFAL I L + +N V + YL+ R +DT+ED + D K ++ AF
Sbjct: 10 LLDLVSRSFALTIPLLDKNKKNKVEVQYLLARIIDTIEDSSHNAED-KDTLITAFINILK 68
Query: 99 RHVYDREWHFSCGTKEY------KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
D +F ++ KVL++ V +F ++ + MG GM
Sbjct: 69 TENLDNLENFKNVVIQHSINENDKVLIENIDVVVKSFFTFKPEIKNISISYLREMGYGMI 128
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD-SLSNSMGLFLQKTNII 211
+ + + +D D+YCYYVAG VGL L++L A +++ D + S+G FLQK NII
Sbjct: 129 YYQDHTISTFEDLDDYCYYVAGTVGLYLTEL--AKILDNIELDREKAKSLGRFLQKVNII 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKY--VNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
+D D E R+FWP ++ ED Y DK+++ L MV +A+ +
Sbjct: 187 KDAKLDYGE---KRVFWPISLFENENPAPYFEDGAY---MDKSMEILIKMVESAMSEFRN 240
Query: 270 CLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFRG-VVKMRRGLTAKVI 322
++Y+ + A +R FC + +M T+ L +N +F G VK+ R T +++
Sbjct: 241 SIEYIMDIDKKASGYRHFCLVAVLMGYETIKLMKSNYNIFMGETVKIPRKNTLEIV 296
>gi|448318701|ref|ZP_21508215.1| Squalene/phytoene synthase [Natronococcus jeotgali DSM 18795]
gi|445598295|gb|ELY52358.1| Squalene/phytoene synthase [Natronococcus jeotgali DSM 18795]
Length = 348
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 31/329 (9%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q E + + W CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQPETNLGTDLEW--CYEAVHGVSRTFSITIDRLDEPMARHICLGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHR------------HVYDRE-WHFSCGTKEYKVLMDQFHHVSTA 128
+P + + +L A+ R + D E W +++V+ + V A
Sbjct: 59 AGHVPPETQTELLNAYDRLLDPADPLEVEAFMADVEPWIPEDRDADWEVVA-ETPRVLRA 117
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLS 181
F L + ++ + + + + GMA F + ++++++ +EYC+Y AG VG ++
Sbjct: 118 FEALEEEPREIMREPVRELVDGMAMFTDRYAEEGGLRLQTLEELEEYCWYAAGTVGTLIT 177
Query: 182 KLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNK 239
L S + D A + N S L LQ NI +D +D E + ++ P E ++
Sbjct: 178 GLVARSASPDRADEMRKNARSFALLLQLVNIAKDVEDDYRE--ENNVYLPEEWLAEENVD 235
Query: 240 LEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTL 297
E + +N + + A +++D +Y+ + + R AIP ++A+GT+
Sbjct: 236 AEAVTAADNQRGVTNVIQRVTGRAEQYLDDAHRYLEVVPERHGNRLSAWAIPYLLAVGTM 295
Query: 298 ALCYNNIE--VFRGVVKMRRGLTAKVIDR 324
N E V G VK+ R VI R
Sbjct: 296 RELRNRPEDVVREGDVKISRAEVFAVIQR 324
>gi|429123414|ref|ZP_19183947.1| squalene/phytoene synthase-like protein [Brachyspira hampsonii
30446]
gi|426280688|gb|EKV57698.1| squalene/phytoene synthase-like protein [Brachyspira hampsonii
30446]
Length = 334
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSFAL I L + +N V + YL+ R +DT+ED + D K ++ F +
Sbjct: 10 LLDLVSRSFALTIPLLDKNKKNKVEVQYLLARIIDTIEDSSHTIQD-KETLITGFINILK 68
Query: 103 DREWHFSCGTKEY----------KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
K KVL++ V +F + ++ + MG GM
Sbjct: 69 SENTDNLENLKNVVIEQTINENDKVLIENIDVVLKSFFAFKQEIKNISISYLREMGYGMI 128
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ + + +D D+YCYYVAG VGL L++L +L + + S+G FLQK NII+
Sbjct: 129 YYQDHTISTFEDLDDYCYYVAGTVGLYLTELTKILDNLELDREK-AKSLGRFLQKVNIIK 187
Query: 213 DYLEDINEIPKCRMFWPREIWSKY--VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
D D E R+FWP ++ ED Y DK+++ L M+ +A+ +
Sbjct: 188 DAKLDYGE---KRVFWPLSLFENENPAPYFEDGAY---MDKSMEILVKMIESAMNEFRNS 241
Query: 271 LKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFRG-VVKMRR 315
++Y+ + A+ +R FC + +M T+ L +N +F G VK+ R
Sbjct: 242 IEYIMTIDKKALGYRHFCLVAVLMGYETIKLMKSNYNIFMGETVKIPR 289
>gi|254787172|ref|YP_003074601.1| phytoene/squalene synthetase family protein [Teredinibacter
turnerae T7901]
gi|237686700|gb|ACR13964.1| phytoene/squalene synthetase family protein [Teredinibacter
turnerae T7901]
Length = 375
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 138/314 (43%), Gaps = 54/314 (17%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
F +ML +VSRSFAL I QL L AV YL+ R DT+EDD I D
Sbjct: 28 FQNTMLPQVSRSFALTIPQLPEFLCLAVTNAYLLCRIADTLEDDPEISADAT-------- 79
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTA-----------------------FLELGKG 135
R +Y F E K F +++A FL L
Sbjct: 80 RDLYG----FFIAALEGKAPPATFCRLASAALSLQTDPVERDLVADADQVIRIFLALPTT 135
Query: 136 YQDAIEDITKRMGAGMAKF---ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL 192
Q+ I K+M AGM + + +ES+ + D YCY+VAG+VG L+ LF ED+
Sbjct: 136 TQNIIATCVKKMCAGMPDYQPGAHRGLESLAELDAYCYFVAGVVGEMLTGLF-CDFAEDI 194
Query: 193 A-----PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF-W-PREIWSKYVNKLEDLKY 245
A D LS S G LQ TNII+D +D+ R F W PR+I+ L++L
Sbjct: 195 ALQRDRLDKLSTSFGQGLQMTNIIKDVWDDLE-----RGFCWLPRDIYGAGGFNLDELAP 249
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNN 303
N+ C +++ A H+++ L Y + R I FC +A+ TL + +
Sbjct: 250 NHNTALFRNCQGQLISIAHGHLQNALDYSLCIPARHKGIRIFCLWAVGLALPTLQKVFTS 309
Query: 304 IEVFRG-VVKMRRG 316
+ G VKM R
Sbjct: 310 SAYYHGKTVKMSRA 323
>gi|448319777|ref|ZP_21509265.1| squalene/phytoene synthase [Natronococcus amylolyticus DSM 10524]
gi|445606183|gb|ELY60087.1| squalene/phytoene synthase [Natronococcus amylolyticus DSM 10524]
Length = 348
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 33/328 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q E + + W CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQPETNLDTDLEW--CYEAVHGVSRTFSITIDRLDEPMARHICLGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHR------------HVYDRE-WHFSCGTKEYKVLMDQFHHVSTA 128
IP + + +L A+ R + D E W +++V+ + + T
Sbjct: 59 AGHIPPETQTELLSAYDRLLDPADPLEVEQFMADIEPWIPEEANADWEVVAETPRVLRT- 117
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLS 181
F L + ++ + D + + GMA F + ++++++ +EYC+Y AG VG ++
Sbjct: 118 FEALDEEPREIMRDPVRELVDGMAMFTDRYAEEGGLRLQTLEELEEYCWYAAGTVGTLIT 177
Query: 182 KLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNK 239
L S + D A + N S L LQ NI +D D +E + ++ P E W N
Sbjct: 178 GLVARSASPDRAEEMRKNARSFALLLQLVNIAKDVESDYHE--ENNVYLPEE-WLAEENV 234
Query: 240 LEDLKYEENSDKAVQCLNDMVTN-ALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGT 296
D E ++ + V + VT A +++D +Y+ + + R AIP ++A+GT
Sbjct: 235 DADAVTEPDNQRGVTNVIQRVTGRAENYLDDAHRYLEVVPERHGNRLSAWAIPYLLAVGT 294
Query: 297 LALCYNNIE--VFRGVVKMRRGLTAKVI 322
L E V G VK+ R VI
Sbjct: 295 LRELQERPEDVVREGDVKICRAEVFAVI 322
>gi|448734619|ref|ZP_21716842.1| Squalene/phytoene synthase [Halococcus salifodinae DSM 8989]
gi|445800081|gb|EMA50448.1| Squalene/phytoene synthase [Halococcus salifodinae DSM 8989]
Length = 356
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 29/318 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ L SR+FA+ + L + +C+ YL+ R DTVED IP+DV+V +L +
Sbjct: 16 WCHDALDGTSRTFAITVDVLDEPMATQICVSYLLCRVADTVEDAGHIPSDVQVDLLETYD 75
Query: 99 RHVYDRE-------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R + + W + ++ V+ + V AF +L ++A D +
Sbjct: 76 RALDPDDTTGIEAFAEAVEPWLPADPDADWTVVA-RAPRVVRAFEDLDPSAREAARDPIR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ +GMA F+ + +E++D+ +EYC+YVAG +G ++ L + +
Sbjct: 135 ELVSGMAMFVERYADTEGIRIETVDELEEYCWYVAGTIGTLITNLLARDASPERTRQLRE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D +D E + ++ P ++ + + + EN+ +
Sbjct: 195 NDRSFALLLQLVNVAKDVTDDYRE--ENNVYLPATWLREHGVEPDGVCDPENTSAVASVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAIFRFCA--IPQIMAIGTLALCYNNIE--VFRGVVK 312
+ +A +V+ Y+ A + A +P ++A+GTL E V G VK
Sbjct: 253 RRVADHASGYVDGARTYLEATPETRGNTLAAWTVPYLLAVGTLRELDERAEDVVRDGGVK 312
Query: 313 MRRGLTAKVIDRTNNMTD 330
+ R ++DR ++ D
Sbjct: 313 ISRAEVLAIVDRFSDGVD 330
>gi|115376402|ref|ZP_01463639.1| squalene synthase [Stigmatella aurantiaca DW4/3-1]
gi|115366609|gb|EAU65607.1| squalene synthase [Stigmatella aurantiaca DW4/3-1]
Length = 402
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
AFC L +VSR+FAL I L L V + YL+ R +DT+ED+ + ++ +L F
Sbjct: 59 AFCREALPEVSRTFALNIPVLPEPLDLVVTVGYLLCRIVDTIEDEATCSATLRAQLLSEF 118
Query: 98 HRHV-YDREW-----HFSCGTKEY---------KVLMDQFHHVSTAFLELGKGYQDAIED 142
R V + W F+ ++ L+ + V AF L Q +
Sbjct: 119 ARLVELPKGWREEVPRFTAQVGQWLRETVPEPEARLVHRTGTVLEAFAALPDWTQPPMAR 178
Query: 143 ITKRMGAGMAKF-----ICKEVESIDDYDE---YCYYVAGLVGLGLSKLF--YASGTEDL 192
+ M GMA + + D + YCYYVAG VG L++LF +A +
Sbjct: 179 CVRAMADGMADVSRELALAPPASGLRDLEATLTYCYYVAGTVGEMLTELFIGFAPRLANQ 238
Query: 193 APD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 250
A + +LS + G LQ NI++D ED+ + + PR + + + L Y EN
Sbjct: 239 ANELRALSPAFGRALQLINILKDIREDLE---RGYCWLPRTVMAAHGLTARTLLYPENRG 295
Query: 251 KAVQCLNDMVTNALMHVEDCLKYMSALR---DHAIFR-FCAIPQIMAIGTLALCYNNIEV 306
+AV LN++V A + L+Y ALR D R FC P A+ L+ NN V
Sbjct: 296 RAVAMLNELVAVARREADISLEY--ALRLPVDEPGLRLFCLWPLFFAVLALSRLENNPAV 353
Query: 307 FRG-VVKMRRGLTAKV--IDRTNNMTDVYL-AFYD--FSNILKPK 345
F VK+ R ++ + + N +D L A Y S L+P+
Sbjct: 354 FEPQPVKISRASVREIMLLTQQNVTSDTVLRALYMQCLSGTLQPE 398
>gi|448337814|ref|ZP_21526888.1| Squalene/phytoene synthase [Natrinema pallidum DSM 3751]
gi|445625015|gb|ELY78386.1| Squalene/phytoene synthase [Natrinema pallidum DSM 3751]
Length = 348
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 29/316 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +CI YL+ R DTVED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICIGYLLCRIADTVEDAGHIP 63
Query: 87 TDVKVPILIAFHRHV-YDRE------------WHFSCGTKEYKVLMDQFHHVSTAFLELG 133
D + +L + R + D E W T ++ V+ + + T F L
Sbjct: 64 PDAQTELLAEYDRLLDPDAEESITAFMDDVEPWIPEDRTDDWDVVAETPRVLRT-FESLD 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
+ ++ + + + + GMA F + +++I++ +EYC+Y AG VG ++ L
Sbjct: 123 EEPREIMREPVRELVDGMAMFTDRYATEGGLRLQTIEELEEYCWYAAGTVGTLITGLVAR 182
Query: 187 SGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+++ A + N S L LQ NI +D +D +E + ++ P E + +E +
Sbjct: 183 GTSQERATEMRENARSFALLLQLVNIAKDVEDDYHE--ENNVYLPAEWLAAEDVDIEAVT 240
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYN 302
E + + + A +++D +Y+ + +H R AIP ++A+GTL
Sbjct: 241 DEAHHGGVTNVIKRVTGRAESYLDDAQRYLEVVPEHNGNRLSAWAIPYLLAVGTLRELRE 300
Query: 303 NIE--VFRGVVKMRRG 316
E V G VK+ R
Sbjct: 301 RPEDVVREGDVKVSRA 316
>gi|312143192|ref|YP_003994638.1| squalene/phytoene synthase [Halanaerobium hydrogeniformans]
gi|311903843|gb|ADQ14284.1| Squalene/phytoene synthase [Halanaerobium hydrogeniformans]
Length = 324
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 136/293 (46%), Gaps = 30/293 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV------P 92
F ++L VSRSFAL I L +++ V + YL R LD ED+ P D+K+
Sbjct: 8 FAKNILKDVSRSFALTIPMLDKIIKDEVLVNYLQDRILDNFEDEIQ-PPDLKLQKRMMDK 66
Query: 93 ILIAFHRHVYDREWHFSCGTKEYKVLMD--------QFHHVSTAFLELGKGYQDAIEDIT 144
+ F YDR+ F + ++ D + A+ Q
Sbjct: 67 VSRIFSPEDYDRQEDFKEIKAKSALIKDADLSRLNYNIDIIYQAYQSFDLETQKISHKWL 126
Query: 145 KRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG-----LGLSKLFYASGTEDLAPDSLSN 199
+ M GM K++ K VE+ + DEYCYYVAG VG L + KL +A+ +++ D+ N
Sbjct: 127 QEMKLGMQKYLTKTVENFTELDEYCYYVAGTVGGFLTELIIYKLDFAAEDKEILLDNF-N 185
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN-KLEDLKYEENSDKAVQCLND 258
GLFLQK N+IRD +D+ + + FWP K +N E+L EN + ++ L+
Sbjct: 186 EAGLFLQKVNLIRDIKDDLEN--REKHFWPL----KELNITEEELLNRENESRVMEALDK 239
Query: 259 MVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTLALCYNNIEVFRG 309
M+ + L H KY AL +F A+ + + T+ +N VF G
Sbjct: 240 MLDDLLKHTAALKKYYHALPQSLSGYKKFFAVNNALGLATVEKLRDNTAVFYG 292
>gi|310822658|ref|YP_003955016.1| squalene synthase [Stigmatella aurantiaca DW4/3-1]
gi|309395730|gb|ADO73189.1| Squalene synthase [Stigmatella aurantiaca DW4/3-1]
Length = 349
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
AFC L +VSR+FAL I L L V + YL+ R +DT+ED+ + ++ +L F
Sbjct: 6 AFCREALPEVSRTFALNIPVLPEPLDLVVTVGYLLCRIVDTIEDEATCSATLRAQLLSEF 65
Query: 98 HRHV-YDREW-----HFSCGTKEY---------KVLMDQFHHVSTAFLELGKGYQDAIED 142
R V + W F+ ++ L+ + V AF L Q +
Sbjct: 66 ARLVELPKGWREEVPRFTAQVGQWLRETVPEPEARLVHRTGTVLEAFAALPDWTQPPMAR 125
Query: 143 ITKRMGAGMAKF-----ICKEVESIDDYDE---YCYYVAGLVGLGLSKLF--YASGTEDL 192
+ M GMA + + D + YCYYVAG VG L++LF +A +
Sbjct: 126 CVRAMADGMADVSRELALAPPASGLRDLEATLTYCYYVAGTVGEMLTELFIGFAPRLANQ 185
Query: 193 APD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 250
A + +LS + G LQ NI++D ED+ + + PR + + + L Y EN
Sbjct: 186 ANELRALSPAFGRALQLINILKDIREDLE---RGYCWLPRTVMAAHGLTARTLLYPENRG 242
Query: 251 KAVQCLNDMVTNALMHVEDCLKYMSALR---DHAIFR-FCAIPQIMAIGTLALCYNNIEV 306
+AV LN++V A + L+Y ALR D R FC P A+ L+ NN V
Sbjct: 243 RAVAMLNELVAVARREADISLEY--ALRLPVDEPGLRLFCLWPLFFAVLALSRLENNPAV 300
Query: 307 FRG-VVKMRRGLTAKV--IDRTNNMTDVYL-AFYD--FSNILKPK 345
F VK+ R ++ + + N +D L A Y S L+P+
Sbjct: 301 FEPQPVKISRASVREIMLLTQQNVTSDTVLRALYMQCLSGTLQPE 345
>gi|336254030|ref|YP_004597137.1| Squalene/phytoene synthase [Halopiger xanaduensis SH-6]
gi|335338019|gb|AEH37258.1| Squalene/phytoene synthase [Halopiger xanaduensis SH-6]
Length = 348
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP + + +L +
Sbjct: 16 WCYDAVHGVSRTFSITIDRLEEPMSRHICVGYLLCRVADTIEDAGHIPPETQTDLLETYD 75
Query: 99 RHV-YDRE------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R + D E W T +++V+ Q V F L + ++ + + +
Sbjct: 76 RLLDPDAEQPVDAFMDEVEPWIPDERTDDWEVVA-QTPRVLRTFDSLEEEPREIMREPVR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F + ++++++ +EYC+Y AG VG ++ L +E+ A +
Sbjct: 135 ELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASEERAREMRD 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ NI +D +D E + ++ P E ++ E + +E N +
Sbjct: 195 NARSFALLLQLVNIAKDVEDDYRE--ENNVYLPAEWLAEENVDAEAVTHEANHGGVTNVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRGVVK 312
+ A +++D +Y+ + + R AIP ++A+GT+ N E V G VK
Sbjct: 253 KRVTNRAETYLDDAQRYLEIVPERHGNRLSAWAIPFLLAVGTMRELQNRPEDVVREGDVK 312
Query: 313 MRRG 316
+ R
Sbjct: 313 VSRA 316
>gi|448729551|ref|ZP_21711866.1| Squalene/phytoene synthase [Halococcus saccharolyticus DSM 5350]
gi|445794853|gb|EMA45391.1| Squalene/phytoene synthase [Halococcus saccharolyticus DSM 5350]
Length = 356
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 29/318 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ L SR+FA+ + L + +C+ YL+ R DTVED IP+DV+V +L +
Sbjct: 16 WCHDALDGTSRTFAITVDVLDEPMATQICVSYLLCRVADTVEDAGHIPSDVQVDLLETYD 75
Query: 99 RHVYDRE-------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R + + W + ++ V+ + V AF +L ++A D +
Sbjct: 76 RALDPDDTTGIEAFAEAVEPWLPADPDADWTVVA-RAPRVVRAFEDLDPSAREAARDPIR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ +GMA F+ + +E++D+ +EYC+YVAG +G ++ L + +
Sbjct: 135 ELVSGMAMFVERYADTEGIRIETVDELEEYCWYVAGTIGTLITNLLARDASPERTRQLRE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D +D E + ++ P ++ + + + EN+ +
Sbjct: 195 NDRSFALLLQLVNVAKDVTDDYRE--ENNVYLPATWLREHGVEPDGVCDPENTSAVASVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAIFRFCA--IPQIMAIGTLALCYNNIE--VFRGVVK 312
+ +A +V+ Y+ A + A +P ++A+GTL E V G VK
Sbjct: 253 RRVADHASGYVDGARTYLEATPETRGNTLAAWTVPYLLAVGTLRELDERAEDVVREGGVK 312
Query: 313 MRRGLTAKVIDRTNNMTD 330
+ R +++R ++ D
Sbjct: 313 ISRAEVLAIVNRFSDGVD 330
>gi|284164459|ref|YP_003402738.1| squalene/phytoene synthase [Haloterrigena turkmenica DSM 5511]
gi|284014114|gb|ADB60065.1| Squalene/phytoene synthase [Haloterrigena turkmenica DSM 5511]
Length = 348
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 31/317 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICLGYLLCRVADTIEDAGHIP 63
Query: 87 TDVKVPILIAFHRHV---YDR----------EWHFSCGTKEYKVLMDQFHHVSTAFLELG 133
+ + +L + R + DR W +++++V+ Q V F L
Sbjct: 64 PETQTELLTEYDRVLDPDADRTVSEFMADVEPWLPEERSEDWEVVA-QTPRVLRTFESLD 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
++ + + + + GMA F + +++I++ +EYC+Y AG VG ++ L A
Sbjct: 123 DEPREIMREPVRELVDGMAMFTDRYATEGGLRLQTIEELEEYCWYAAGTVGTLITGLV-A 181
Query: 187 SGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT D + + S L LQ NI +D +D +E + ++ P E + +E++
Sbjct: 182 RGTSRERADEMRENARSFALLLQLVNIAKDVEDDYHE--ENNVYLPAEWLAAENVDVEEV 239
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCY 301
E + + + A +++D +Y+ + +H R AIP ++A+GTL
Sbjct: 240 TDEAHHGGVTNVIQRVTGRAERYLDDAQRYLEVVPEHHGNRLSAWAIPYLLAVGTLRELR 299
Query: 302 NNIE--VFRGVVKMRRG 316
E + G VK+ R
Sbjct: 300 ERPEDVIREGDVKVSRA 316
>gi|397775399|ref|YP_006542945.1| Squalene/phytoene synthase [Natrinema sp. J7-2]
gi|448343281|ref|ZP_21532221.1| Squalene/phytoene synthase [Natrinema gari JCM 14663]
gi|397684492|gb|AFO58869.1| Squalene/phytoene synthase [Natrinema sp. J7-2]
gi|445623676|gb|ELY77076.1| Squalene/phytoene synthase [Natrinema gari JCM 14663]
Length = 348
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 29/316 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +CI YL+ R DT+ED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICIGYLLCRIADTIEDAGHIP 63
Query: 87 TDVKVPILIAFHR------------HVYDRE-WHFSCGTKEYKVLMDQFHHVSTAFLELG 133
D + +L + R + D E W T ++ V+ + + T F L
Sbjct: 64 PDAQTELLAEYDRLLDPDAAESIPAFMNDVEPWIPEDRTDDWDVVAETPRVLRT-FESLD 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
+ ++ + + + + GMA F + +++I++ +EYC+Y AG VG ++ L
Sbjct: 123 EEPREIMREPVRELVDGMAMFTDRYATEGGLRLQTIEELEEYCWYAAGTVGTLITGLVAR 182
Query: 187 SGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+++ A + N S L LQ NI +D +D +E + ++ P E + +E +
Sbjct: 183 GTSQERATEMRENARSFALLLQLVNIAKDVDDDYHE--ENNVYLPAEWLAAEDVDIEAVT 240
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYN 302
E + + + A +++D +Y+ + +H R AIP ++A+GTL
Sbjct: 241 DEAHHGGVTNVIKRVTGRAESYLDDAQRYLEVVPEHNGNRLSAWAIPYLLAVGTLRELRE 300
Query: 303 NIE--VFRGVVKMRRG 316
E + G VK+ R
Sbjct: 301 RPEDVIREGDVKVSRA 316
>gi|448344842|ref|ZP_21533744.1| Squalene/phytoene synthase [Natrinema altunense JCM 12890]
gi|445636948|gb|ELY90105.1| Squalene/phytoene synthase [Natrinema altunense JCM 12890]
Length = 348
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 29/316 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +CI YL+ R DT+ED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICIGYLLCRIADTIEDAGHIP 63
Query: 87 TDVKVPILIAFHRHV-YDRE------------WHFSCGTKEYKVLMDQFHHVSTAFLELG 133
D + +L + R + D E W T ++ V+ + + T F L
Sbjct: 64 PDAQTELLAEYDRLLDPDAEESITAFMDDVEPWIPEDRTDDWDVVAETPRVLRT-FESLD 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
+ ++ + + + + GMA F + +++I++ +EYC+Y AG VG ++ L
Sbjct: 123 EEPREIMREPVRELVDGMAMFTDRYSTEGGLRLQTIEELEEYCWYAAGTVGTLITGLVAR 182
Query: 187 SGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+++ A + N S L LQ NI +D +D +E + ++ P E + +E +
Sbjct: 183 GTSQERATEMRENARSFALLLQLVNIAKDVDDDYHE--ENNVYLPAEWLAAEDVDVEAVT 240
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYN 302
E + + + A +++D +Y+ + +H R AIP ++A+GTL
Sbjct: 241 DEAHHGGVTNVIKRVTGRAESYLDDAQRYLEVVPEHNGNRLSAWAIPYLLAVGTLRELRE 300
Query: 303 NIE--VFRGVVKMRRG 316
E V G VK+ R
Sbjct: 301 RPEDVVREGDVKVSRA 316
>gi|448328000|ref|ZP_21517317.1| Squalene/phytoene synthase [Natrinema versiforme JCM 10478]
gi|445616729|gb|ELY70346.1| Squalene/phytoene synthase [Natrinema versiforme JCM 10478]
Length = 348
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 148/322 (45%), Gaps = 33/322 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q E P + +CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQPES--PTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICLGYLLCRIADTIED 58
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHFSCG--------------TKEYKVLMDQFHHVST 127
IP + + +L F R + D + S G T +++V+ + + T
Sbjct: 59 AGHIPPETQTELLATFDR-LLDPDESESVGAFMDDVEPWIPEDRTDDWEVVAETPRVLRT 117
Query: 128 AFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGL 180
F L + ++ + + + + GMA F + +++I++ +EYC+Y AG VG +
Sbjct: 118 -FESLKEEPREIMREPVRELVDGMAMFTDRYATEGGLRLQTIEELEEYCWYAAGTVGTLI 176
Query: 181 SKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
+ L + + A + N S L LQ NI +D +D +E + ++ P E +
Sbjct: 177 TGLVARGTSNERAAEMRENARSFALLLQLVNIAKDVEDDYHE--ENNVYLPAEWLAAEDV 234
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGT 296
+E + E + + + A +++D +Y+ + +H R AIP ++A+GT
Sbjct: 235 DVEAVTDEAHHGGVTNVIQRVTGRAEGYLDDAQRYLEVVPEHHGNRLSAWAIPYLLAVGT 294
Query: 297 LALCYNNIE--VFRGVVKMRRG 316
L E V G VK+ R
Sbjct: 295 LRELRERPEDVVREGDVKVSRA 316
>gi|435846360|ref|YP_007308610.1| phytoene/squalene synthetase [Natronococcus occultus SP4]
gi|433672628|gb|AGB36820.1| phytoene/squalene synthetase [Natronococcus occultus SP4]
Length = 348
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 149/327 (45%), Gaps = 31/327 (9%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q E + + W CY +H VSR+F++ I++L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQPETNLGTDLEW--CYEAVHGVSRTFSITIERLDEPMARHICLGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHRHVYDRE-------------WHFSCGTKEYKVLMDQFHHVSTA 128
IP + + +L A+ R + + W +++V+ + + T
Sbjct: 59 AGHIPPETQTELLNAYDRLLDPADSLEAEAFMAEVEPWIPDDPDADWEVVAETPRVLRT- 117
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLS 181
F + + ++ + D + + GMA F + ++++++ +EYC+Y AG VG ++
Sbjct: 118 FEAIDEEPREIMRDPVRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLIT 177
Query: 182 KLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNK 239
L S + D A + N S L LQ NI +D D +E + ++ P E ++
Sbjct: 178 GLVARSASPDRAEEMRKNARSFALLLQLVNIAKDVENDYHE--ENNVYLPAEWLAEEDVD 235
Query: 240 LEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTL 297
++ + +N + + A +++D +Y+ + + R AIP ++A+GT+
Sbjct: 236 VDAVTAADNQSGVTNVIQRVTGRAEQYLDDAHRYLEVVPERHGNRLSAWAIPYLLAVGTM 295
Query: 298 ALCYNNIE--VFRGVVKMRRGLTAKVI 322
E V G VK+ R VI
Sbjct: 296 RELQERPEDVVREGDVKISRAEVFAVI 322
>gi|448446758|ref|ZP_21590980.1| Squalene/phytoene synthase [Halorubrum saccharovorum DSM 1137]
gi|445683902|gb|ELZ36292.1| Squalene/phytoene synthase [Halorubrum saccharovorum DSM 1137]
Length = 355
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 32/294 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P EP +CY + VSR+FAL + L + + +C+ YL+ R DTVED IP + +
Sbjct: 8 PVEPDLEWCYEAVQGVSRTFALTVDVLEEPMASHICVGYLLCRVADTVEDAGHIPPEAQS 67
Query: 92 PIL--------------IAFHRHVYDREWHFSCGTK--EYKVLMDQFHHVSTAFLELGKG 135
+L IA R D EW + + +++V+ + V+T F E
Sbjct: 68 DVLRTYRRAIDPDDDTDIAAFREAVD-EWLPAPAERNDDWEVVAEAPTIVAT-FAEFDPE 125
Query: 136 YQDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASG 188
+DAI M GMA F+ + IDD DE YCYY AG VG ++ L
Sbjct: 126 ARDAIVPPVVEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGD 185
Query: 189 -TEDLAP--DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY 245
TED A + GL LQ N+ +D +D E + ++ P E + E + +
Sbjct: 186 ITEDRARRLRDTAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLADEGVDQERVVH 243
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
EN + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 244 PENRESSARVVDRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 297
>gi|448713720|ref|ZP_21702005.1| squalene/phytoene synthase [Halobiforma nitratireducens JCM 10879]
gi|445789128|gb|EMA39819.1| squalene/phytoene synthase [Halobiforma nitratireducens JCM 10879]
Length = 352
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 41/328 (12%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M S Q E + W CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTSGQPEYGTHADLEW--CYDAVHGVSRTFSITIDRLEEPMAKHICVGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFH------------------ 123
IP + + +L + R + D E + + MD+
Sbjct: 59 AGHIPPETQTELLEEYDR-LLDPE---TDTDRTVAAFMDEVEPWVPDPEKRNEDWEVVAE 114
Query: 124 --HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAG 174
V F L + ++ + D + + GMA F + ++++++ +EYC+Y AG
Sbjct: 115 TPRVLGTFESLDEEPREIMRDPVRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAG 174
Query: 175 LVGLGLSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREI 232
VG ++ L +E A + N S L LQ NI +D D +E + ++ P E
Sbjct: 175 TVGTLITGLVARGASEQRAEEMRDNARSFALLLQLVNIAKDVENDYHE--ENNVYLPAEW 232
Query: 233 WSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQ 290
+ +E++ EEN + + A +V+D +Y+ + + R AIP
Sbjct: 233 LEEENVAIEEVTREENHGAVTNVIQRVTDRAETYVDDAHRYLEVVPERHGNRLSAWAIPY 292
Query: 291 IMAIGTLALCYNNIE--VFRGVVKMRRG 316
++A+GT+ E V G VK+ R
Sbjct: 293 LLAVGTMRELRERPEDVVKEGDVKVPRA 320
>gi|448669862|ref|ZP_21686718.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula amylolytica JCM 13557]
gi|445766975|gb|EMA18085.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula amylolytica JCM 13557]
Length = 348
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 16 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 75
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 76 RSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTQTIRGPVR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 135 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQVAQMEE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ +N D V +
Sbjct: 195 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTDNVDSLVPVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 253 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 295
>gi|448410020|ref|ZP_21574969.1| farnesyl-diphosphate farnesyltransferase [Halosimplex carlsbadense
2-9-1]
gi|445672300|gb|ELZ24876.1| farnesyl-diphosphate farnesyltransferase [Halosimplex carlsbadense
2-9-1]
Length = 348
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL---- 94
+CY + VSR+FAL + +L + +C+ YL+ R DTVED IP + +L
Sbjct: 16 YCYDAVQDVSRTFALTVAELDEPMSRDICVGYLLCRIADTVEDAGHIPPAEQRTLLDLYN 75
Query: 95 ----------IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDIT 144
+A R D EW +++V+ Q V AF L Q AI
Sbjct: 76 RVLDPEDDATVAEFRAAVD-EWIPESPNDDWEVVA-QSPRVFRAFDGLDDDSQAAIRPPV 133
Query: 145 KRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
+ + +GMA F+ + +++ + +EYC+Y AG VG ++ L + +D ++L
Sbjct: 134 RELVSGMAMFVERYAEQGGLRLQTFGELEEYCWYAAGTVGTLVTGLL-SRNVDDSVSETL 192
Query: 198 SN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
N S + LQ N+ +D D E + ++ P+E+ + ED++ +N ++ V
Sbjct: 193 QNNARSFAMLLQLVNVSKDVATDFEE--ENNVYIPQELLNDQQLDTEDIRDGDNGEEFVP 250
Query: 255 CLNDMVTNA---LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE--VFRG 309
+ +V A L + L+ M +R + + + AIP ++A+GTL E + G
Sbjct: 251 VIRRVVDRAEGYLDGAQTWLEAMPEIRGNTLSAW-AIPFLLAVGTLRELEERPEDVIEEG 309
Query: 310 VVKMRR 315
VK+ R
Sbjct: 310 DVKVSR 315
>gi|333985129|ref|YP_004514339.1| squalene/phytoene synthase [Methylomonas methanica MC09]
gi|333809170|gb|AEG01840.1| Squalene/phytoene synthase [Methylomonas methanica MC09]
Length = 363
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL L AV YL+ R +DT+ED+ S+ + K AF + V
Sbjct: 26 LLEGVSRTFALTIPQLPGTLYPAVANAYLLCRIVDTIEDEISLTAEQKKRFCSAFIQIVK 85
Query: 103 DREWHFSCGTKEYKVLMDQ--------FHHVSTAFL---ELGKGYQDAIEDITKRMGAGM 151
+ + T+ +L DQ H + L DA+ + M GM
Sbjct: 86 TGQGAEAFATELAGLLSDQTIPAEHCLIHLIPRVIAITHTLDPAQIDALAGCVETMANGM 145
Query: 152 AKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDS---LSNSMGL 203
+ + ++++ D D+YCYYVAG VG L+KLF + S D D LS S G
Sbjct: 146 PIYQALDLHAGLKTMKDMDDYCYYVAGCVGEMLAKLFCHYSPQIDTHRDELLKLSVSFGQ 205
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTN 262
LQ TNI++D +D K + W P++I+++ L +L E + D+ Q L ++
Sbjct: 206 GLQMTNILKDIWDD----AKRGVCWLPQDIFTETGFNLAELTPETDDDRFRQGLEHLIGI 261
Query: 263 ALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNI 304
A H+++ L Y L H I FC MAI TL N+
Sbjct: 262 ARDHLQNALHYTQLLPSHETGIRNFCLWALGMAILTLKKIKQNL 305
>gi|448685361|ref|ZP_21693353.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula japonica DSM 6131]
gi|445781972|gb|EMA32823.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula japonica DSM 6131]
Length = 348
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 129/283 (45%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 16 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 75
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L +I +
Sbjct: 76 RSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTQSIRGPVR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 135 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ +N D V +
Sbjct: 195 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTDNVDSLVPVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 253 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 295
>gi|344212312|ref|YP_004796632.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula hispanica ATCC 33960]
gi|343783667|gb|AEM57644.1| farnesyl-diphosphate farnesyltransferase / Squalene/phytoene
synthase [Haloarcula hispanica ATCC 33960]
Length = 348
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 16 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 75
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 76 RSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTQTIRGPVR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 135 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ +N D V +
Sbjct: 195 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTDNVDSLVPVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 253 EQVTKRAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 295
>gi|448495658|ref|ZP_21610103.1| Squalene/phytoene synthase [Halorubrum californiensis DSM 19288]
gi|445687751|gb|ELZ40026.1| Squalene/phytoene synthase [Halorubrum californiensis DSM 19288]
Length = 353
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 32/296 (10%)
Query: 29 KQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTD 88
K P E A+C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP D
Sbjct: 5 KHAPAEADLAWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGHIPPD 64
Query: 89 VKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQF---------------HHVSTAFLELG 133
+ +L + R + D + G E++ +D++ ++ F +L
Sbjct: 65 AQSDVLRTYRRAI-DPDHETDIG--EFREAVDEWLPDERDDDWTVVAEAPTIAATFEDLD 121
Query: 134 KGYQDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYA 186
Q AI M GMA F+ + IDD DE YCYY AG VG ++ L
Sbjct: 122 PEAQKAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTR 181
Query: 187 SGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
+ + L + GL LQ N+ +D +D E + ++ P E + E +
Sbjct: 182 GDVGEERAERLRETAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLEAEGVEQERV 239
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
+ EN + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 240 VHPENRESSARVVDRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 295
>gi|448395354|ref|ZP_21568681.1| squalene/phytoene synthase [Haloterrigena salina JCM 13891]
gi|445661364|gb|ELZ14150.1| squalene/phytoene synthase [Haloterrigena salina JCM 13891]
Length = 348
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 31/317 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICLGYLLCRVADTIEDAGHIP 63
Query: 87 TDVKVPILIAFHRHV---YDR----------EWHFSCGTKEYKVLMDQFHHVSTAFLELG 133
+ + +L + R + DR W + +++V+ Q V F L
Sbjct: 64 PETQTELLTEYDRVLDPDADRTVSEFMADVEPWLPEERSDDWEVVA-QTPRVLGTFESLA 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
++ + + + + GMA F + ++++++ +EYC+Y AG VG ++ L A
Sbjct: 123 DEPREIMREPVRELVDGMAMFTDRYATEGGLRLQTVEELEEYCWYAAGTVGTLITGLV-A 181
Query: 187 SGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT D + + S L LQ NI +D +D +E + ++ P E + +E +
Sbjct: 182 RGTSRERADEMRENARSFALLLQLVNIAKDVEDDYHE--ENNVYLPAEWLAAEDVDVEAV 239
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCY 301
E + + + A +++D +Y+ + +H R AIP ++A+GTL
Sbjct: 240 TDEAHHGGVTNVIKRVTGRAERYLDDAQRYLEVVPEHHGNRLSAWAIPYLLAVGTLRELR 299
Query: 302 NNIE--VFRGVVKMRRG 316
E V G VK+ R
Sbjct: 300 ERPEDVVREGDVKVSRA 316
>gi|448634056|ref|ZP_21674511.1| farnesyl-diphosphate farnesyltransferase [Haloarcula vallismortis
ATCC 29715]
gi|445749985|gb|EMA01426.1| farnesyl-diphosphate farnesyltransferase [Haloarcula vallismortis
ATCC 29715]
Length = 351
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 19 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQADLLQTYS 78
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 79 RSLEPSSGTTVSSFHNAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLEDHSTRTIRGPVR 137
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 138 ELVDGMAMFVDRYAEAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 197
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ +N D V +
Sbjct: 198 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSNTDNVDSLVPVI 255
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 256 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 298
>gi|448302036|ref|ZP_21492022.1| squalene/phytoene synthase [Natronorubrum tibetense GA33]
gi|445582328|gb|ELY36670.1| squalene/phytoene synthase [Natronorubrum tibetense GA33]
Length = 348
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 142/316 (44%), Gaps = 29/316 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHDVSRTFSITIDRLEEPMAKHICLGYLLCRVADTIEDAGHIP 63
Query: 87 TDVKVPILIAFHRHVYD-------------REWHFSCGTKEYKVLMDQFHHVSTAFLELG 133
+ + +L A+ + + W T ++ V+ + + T F L
Sbjct: 64 PEAQSDLLTAYDQLLNPDADQTVSAFMDEVEPWIPDERTDDWNVVAETPRVLRT-FESLD 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
+ ++ + + + + GMA F + ++++++ +EYC+Y AG VG ++ L
Sbjct: 123 EEPREIMREPVRELVDGMAMFTSRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVAR 182
Query: 187 SGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+ D A + +N S L LQ NI +D D +E + ++ P E + LE +
Sbjct: 183 GASPDRAEEMRNNARSFALLLQLVNIAKDVESDYHE--ENNVYLPAEWLEEEDVDLEAVT 240
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYN 302
E N + + A +++D +Y+ + + R AIP ++A+GT+
Sbjct: 241 DESNQRGVTNVIKRVTGRAETYLDDAHRYLEVVPETHGNRLSAWAIPYLLAVGTMRELRE 300
Query: 303 NIE--VFRGVVKMRRG 316
E V G VK+ R
Sbjct: 301 RPEDVVREGDVKVSRA 316
>gi|448681564|ref|ZP_21691655.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula argentinensis DSM 12282]
gi|445767434|gb|EMA18537.1| farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase
[Haloarcula argentinensis DSM 12282]
Length = 348
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 16 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 75
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 76 RSLEPSSGTTVSTFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTRTIRGPVR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 135 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ +N D V +
Sbjct: 195 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTDNVDSLVPVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 253 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 295
>gi|448432422|ref|ZP_21585558.1| Squalene/phytoene synthase [Halorubrum tebenquichense DSM 14210]
gi|448537788|ref|ZP_21622657.1| Squalene/phytoene synthase [Halorubrum hochstenium ATCC 700873]
gi|445687306|gb|ELZ39598.1| Squalene/phytoene synthase [Halorubrum tebenquichense DSM 14210]
gi|445701748|gb|ELZ53721.1| Squalene/phytoene synthase [Halorubrum hochstenium ATCC 700873]
Length = 353
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 28/291 (9%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P E A+C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP + +
Sbjct: 8 PGEADLAWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGHIPPEAQS 67
Query: 92 PILIAFHRHVYD-------------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQD 138
+L + R + EW + ++ V+ + ++ F EL Q+
Sbjct: 68 DVLRTYRRAIDPDDETEIGAFREAVDEWLPAERDDDWTVVA-EAPTIAATFEELDPEAQE 126
Query: 139 AIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASGTED 191
AI M GMA F+ + IDD DE YCYY AG VG ++ L +
Sbjct: 127 AIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGDVAE 186
Query: 192 LAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
D L + GL LQ N+ +D +D E + ++ P E + E + + EN
Sbjct: 187 ERADRLRETAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLEAEGVEQERVVHPEN 244
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
+ + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 245 RESSARVVDRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 295
>gi|55378258|ref|YP_136108.1| farnesyl-diphosphate farnesyltransferase [Haloarcula marismortui
ATCC 43049]
gi|55230983|gb|AAV46402.1| farnesyl-diphosphate farnesyltransferase [Haloarcula marismortui
ATCC 43049]
Length = 416
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 84 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 143
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 144 RSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTQTIRGPVR 202
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 203 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 262
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ N D V +
Sbjct: 263 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTGNVDSLVPVI 320
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 321 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 363
>gi|448636877|ref|ZP_21675325.1| farnesyl-diphosphate farnesyltransferase [Haloarcula sinaiiensis
ATCC 33800]
gi|445765183|gb|EMA16322.1| farnesyl-diphosphate farnesyltransferase [Haloarcula sinaiiensis
ATCC 33800]
Length = 348
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 16 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 75
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 76 RSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTQTIRGPVR 134
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 135 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 194
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ N D V +
Sbjct: 195 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTGNVDSLVPVI 252
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 253 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 295
>gi|448661561|ref|ZP_21683716.1| farnesyl-diphosphate farnesyltransferase [Haloarcula californiae
ATCC 33799]
gi|445758391|gb|EMA09705.1| farnesyl-diphosphate farnesyltransferase [Haloarcula californiae
ATCC 33799]
Length = 351
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H+VSR+F+L I +L + +C+ YL+ R DT+ED +P V+ +L +
Sbjct: 19 WCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPPAVQTELLQTYS 78
Query: 99 R-------------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H EW + +++V+ + + F L I +
Sbjct: 79 RSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVV-ENAGRIVDVFHTLDDHSTQTIRGPVR 137
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + ++++D+ +EYC+Y AG VG ++ L T++
Sbjct: 138 ELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEATDEQIAQMEE 197
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ N+ +D D+ E + ++ P E+ + D+ N D V +
Sbjct: 198 NARSFALLLQLVNVAKDAATDMEE--ENNVYLPLELLHEQGLDHSDVSDTGNVDSLVPVI 255
Query: 257 NDMVTNALMHVEDCLKYMSALRD--HAIFRFCAIPQIMAIGTL 297
+ A +++D ++ A+ + AIP ++A+GT+
Sbjct: 256 EQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAVGTI 298
>gi|222479633|ref|YP_002565870.1| Squalene/phytoene synthase [Halorubrum lacusprofundi ATCC 49239]
gi|222452535|gb|ACM56800.1| Squalene/phytoene synthase [Halorubrum lacusprofundi ATCC 49239]
Length = 355
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P EP ++C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP + +
Sbjct: 8 PAEPDLSWCHEAVQGVSRTFALTVDVLEEPMASHICVGYLLCRVADTVEDAGHIPPEAQS 67
Query: 92 PILIAFHRHVYD-------------REWHFSCGTK--EYKVLMDQFHHVSTAFLELGKGY 136
+L + R + EW + + +++V+ + V+T F E
Sbjct: 68 DVLRTYRRAIDPDDDTDIVAFRDAVDEWLPAPADRNDDWEVVAEVPTIVAT-FAEFEPEA 126
Query: 137 QDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASG- 188
+DAI M GMA F+ + IDD DE YCYY AG VG ++ L
Sbjct: 127 RDAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGDV 186
Query: 189 TEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
TED A + GL LQ N+ +D +D E + ++ P E + E + +
Sbjct: 187 TEDRARQLRDTAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLADEGVDQERVVHP 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
EN + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 245 ENRESSARVVSRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 297
>gi|303323001|ref|XP_003071492.1| Squalene and phytoene synthases family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111194|gb|EER29347.1| Squalene and phytoene synthases family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 240
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 41 YSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH 100
Y L SRSF V Q+L +L V +FYLVLR+LDT+EDD +I + K P+L F+
Sbjct: 23 YRFLALTSRSFVAVCQELHPELLLPVVVFYLVLRSLDTIEDDMTIGIEEKEPLLRNFYTR 82
Query: 101 VYDREWHFSCGTKEYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF--IC 156
+ + W F + K + +F V+ F L Y+ I+DI K MG GMA + +
Sbjct: 83 IDEENWAFDGSGPDEKDREALVKFDCVAREFNLLKDEYRAIIKDIAKGMGNGMADYAKMA 142
Query: 157 KE------VESIDDYDEYCYYVAGLVG 177
E V++I DY+ YC+YVAGLVG
Sbjct: 143 DENANGLSVKTIKDYELYCHYVAGLVG 169
>gi|307102345|gb|EFN50644.1| hypothetical protein CHLNCDRAFT_55669 [Chlorella variabilis]
Length = 200
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 66/142 (46%), Gaps = 51/142 (35%)
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICK-----------EVESIDDYDEYCYYVAGLVG 177
F L K YQ I DI K+MGAGMA F+ EVES++DY+ YC+YVAGL
Sbjct: 2 FQGLDKRYQQVIADICKKMGAGMADFVTADAAESEVGLGGEVESVEDYNLYCHYVAGL-- 59
Query: 178 LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
EDINE P+ RM+WP+++W +Y
Sbjct: 60 --------------------------------------EDINEQPRPRMWWPKDVWGRYA 81
Query: 238 NKLEDLKYEENSDKAVQCLNDM 259
LED K + KAVQCLN M
Sbjct: 82 ASLEDFKQPAQAGKAVQCLNHM 103
>gi|295705972|ref|YP_003599047.1| squalene/phytoene synthase [Bacillus megaterium DSM 319]
gi|294803631|gb|ADF40697.1| squalene/phytoene synthase [Bacillus megaterium DSM 319]
Length = 272
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML + SR+F + I L +L+NAV YL +RA+D +ED + VK +L A +
Sbjct: 14 MLKETSRTFFIPISHLPAELQNAVGSAYLCMRAIDEIEDHPELEAGVKSRLLYAISDLLK 73
Query: 103 DREWHFSCGTKEYKVLMDQFH-HVSTAFLELGK-------GYQDAIEDITKRMGAGMAKF 154
S EY L+ + + L+LG G D + D T M GMA +
Sbjct: 74 K-----SFNEDEYMALVGPYQADLPDVTLQLGNWIALCPTGVADQVLDATSIMAKGMADW 128
Query: 155 ICKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+ K+ +++ D D+Y +YVAGLVG+ L+ ++ + GTE L+ + G LQ NI+
Sbjct: 129 VEKDWHIQNEADLDDYTFYVAGLVGVMLNDIWKWYDGTE--TDKELAIAFGRGLQSVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED + F+P WS+ DM A ++
Sbjct: 187 RNTSEDSE---RGVSFFPNN-WSR---------------------EDMFAYARRNLSLGK 221
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNM 328
KY+ ++ I FC IP +A GTL + +G KM R K ++ +M
Sbjct: 222 KYLEDVKSLPILHFCKIPLALADGTLN------ALMKGKEKMTRDDVNKTVNEVVDM 272
>gi|448725466|ref|ZP_21707921.1| Squalene/phytoene synthase [Halococcus morrhuae DSM 1307]
gi|445798313|gb|EMA48728.1| Squalene/phytoene synthase [Halococcus morrhuae DSM 1307]
Length = 349
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 29/304 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ L SR+FA+ + L + +C+ YL+ R DT+ED IP +V+ +L +
Sbjct: 13 WCHEALDGTSRTFAITVDLLDEPMATQICVSYLLCRIADTIEDAGHIPPNVQSTLLRNYD 72
Query: 99 R-------HVYD------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H + W G ++++V+ + V AF L + A+ D +
Sbjct: 73 RVLDPDDDHAVEAFEHAVEPWLPDDGGEDWRVVANA-PRVLRAFESLAPDARAAVLDPIR 131
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD--S 196
+ +GMA F+ + +E+I++ +EYC+Y AG VG ++ L T +
Sbjct: 132 ELVSGMALFVERHADTDGLRIETIEELEEYCWYAAGTVGTLVTNLLARDATPERTRKLRE 191
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
S L LQ N+ +D +D E + ++ P E E++ N+ + +
Sbjct: 192 TDRSFSLLLQLVNVAKDVSDDYRE--ENNVYLPTEWLRAEDVDPENVCEPSNTQSVARVI 249
Query: 257 NDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTL-ALCYNNIEVFR-GVVK 312
+ A + +D +Y++A + A+P ++AIGTL L + +V R G VK
Sbjct: 250 RRVTDRAESYADDARRYLAAAPETNGNTLAAWAVPYLLAIGTLRELDAHAEDVLREGGVK 309
Query: 313 MRRG 316
+ R
Sbjct: 310 ISRA 313
>gi|383622415|ref|ZP_09948821.1| squalene/phytoene synthase [Halobiforma lacisalsi AJ5]
gi|448694679|ref|ZP_21697179.1| squalene/phytoene synthase [Halobiforma lacisalsi AJ5]
gi|445785264|gb|EMA36059.1| squalene/phytoene synthase [Halobiforma lacisalsi AJ5]
Length = 352
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 139/334 (41%), Gaps = 53/334 (15%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M S Q E I + W C+ +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTSGQPEYGIHADLEW--CFDAVHGVSRTFSITIDRLEEPMARHICVGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHR--------------------------HVYDREWHFSCGTKEY 115
IP + + +L + R D++W T
Sbjct: 59 AGHIPPETQTELLQEYDRLLDPETDTDRTVATFMEKVEPWLPAPEERDQDWEVVARTP-- 116
Query: 116 KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEY 168
V F L + ++ + D + + GMA F + ++++++ +EY
Sbjct: 117 --------RVLGTFESLDEEPREIMRDPVRELVDGMAMFTDRYADEGGLRLQTLEELEEY 168
Query: 169 CYYVAGLVGLGLSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRM 226
C+Y AG VG ++ L +E+ A + N S L LQ NI +D D +E + +
Sbjct: 169 CWYAAGTVGTLITGLVARGASEERAEEMRDNARSFALLLQLVNIAKDVENDYHE--ENNV 226
Query: 227 FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC 286
+ P E + E + EN + + + A +V+D +Y+ + + R
Sbjct: 227 YLPAEWLADEEVPAEAVTDAENHGAVTNVIRRVTSRAETYVDDAHRYLEVVPEKHGNRLS 286
Query: 287 --AIPQIMAIGTLALCYNNIE--VFRGVVKMRRG 316
AIP ++A+GT+ E V G VK+ R
Sbjct: 287 AWAIPYLLAVGTMRELRERPEDVVREGDVKVPRA 320
>gi|194267464|gb|ACF35715.1| squalene synthase 1 [Glycyrrhiza uralensis]
Length = 48
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/48 (89%), Positives = 44/48 (91%)
Query: 111 GTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
GTKEYKVLMDQFHHVSTAFLEL K YQ AIE+ITKRMGAGMAKFIC E
Sbjct: 1 GTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICNE 48
>gi|452205957|ref|YP_007486079.1| squalene synthase [Natronomonas moolapensis 8.8.11]
gi|452082057|emb|CCQ35308.1| squalene synthase [Natronomonas moolapensis 8.8.11]
Length = 355
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 36/296 (12%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P +A+C + +VSR+FAL + L + +C+ YL+ R DT+ED + I TD +
Sbjct: 9 PASPDYAWCREAVQRVSRTFALTVDVLEEPMSRHICLGYLLCRVADTIEDASHIDTDRQA 68
Query: 92 --------------PILIAFHRHVYDREWHFSCGTK--EYKVLMDQFHHVSTAFLELGKG 135
P IA R D W G + +++V+ + V+T F +L
Sbjct: 69 ELLYIYDAALDPGDPTTIAEFRTAVD-AWLPPQGKRNADWEVVAEAPTVVAT-FDDLPAD 126
Query: 136 YQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASG 188
Q+A+ + M GMA F+ + + ++ +EYCYY AG VG ++ L
Sbjct: 127 VQEAVRPPVQEMIDGMAMFVERYADEGGLRIGDREELEEYCYYAAGTVGTLITNLLAHGS 186
Query: 189 TEDLAPDSLSNS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN----KLE 241
++ ++ N+ GL LQ N+ +D +D +E + ++ P E W + +
Sbjct: 187 ADERRVRTMRNTAEEFGLLLQLVNVSKDVYDDYSE--ENNVYLPAE-WLEAEGVPQEAVV 243
Query: 242 DLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
D ++ + S + V D+ + L + L+ M LR +P ++A+GTL
Sbjct: 244 DPEHRDGSARVVARTADLARSCLDEAQAYLEAMP-LRQGNTLSAWLVPYVLAVGTL 298
>gi|448359647|ref|ZP_21548297.1| squalene/phytoene synthase [Natrialba chahannaoensis JCM 10990]
gi|445642282|gb|ELY95351.1| squalene/phytoene synthase [Natrialba chahannaoensis JCM 10990]
Length = 350
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 33/307 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP + +L +
Sbjct: 16 WCYDAVHGVSRTFSITIDRLEEPMSKHICLGYLLCRIADTIEDAGHIPPAEQTELLTEYD 75
Query: 99 RHVYDREWHFSCG----------------TKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
R + D E S + ++ V+ + + T F L + ++ + +
Sbjct: 76 R-LLDPETDQSVEAFMANVEPWLPEPADRSNDWNVVAETPRVLQT-FESLNEEPREIMRE 133
Query: 143 ITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
+ + GMA F + ++++++ +EYC+Y AG VG ++ L ++D A +
Sbjct: 134 PVRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASKDRAEE 193
Query: 196 SLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
N S L LQ NI +D D +E + ++ P E ++ L+ + EEN +
Sbjct: 194 MRDNARSFALLLQLVNIAKDVESDYHE--ENNVYLPAEWLAEEDVDLDAVTDEENHNGVT 251
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRG 309
+ + A +++D +Y+ + + R AIP ++A+GT+ E V G
Sbjct: 252 NVVERVTGRAETYLDDAQRYLEVVPEQHGNRLSAWAIPYLLAVGTMRELRERPEDVVEEG 311
Query: 310 VVKMRRG 316
VK+ R
Sbjct: 312 DVKVPRA 318
>gi|335436824|ref|ZP_08559613.1| Squalene/phytoene synthase [Halorhabdus tiamatea SARL4B]
gi|334897089|gb|EGM35226.1| Squalene/phytoene synthase [Halorhabdus tiamatea SARL4B]
Length = 348
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 31/292 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
PP+ W CY + VSR+FAL ++ L + + + + YL+ R DTVED + IP D +V
Sbjct: 7 PPDAEW--CYEAVQGVSRTFALTVEALEEPMASQIGLGYLLCRIADTVEDASHIPPDEQV 64
Query: 92 PILIAFH--------------RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQ 137
+LI + R D W + + ++ + V F E +
Sbjct: 65 SLLITYDAAVDPDSPTTMRDFRAAVD-PWLPAPPRSDDWTVVARAPTVWATFAEQPADAR 123
Query: 138 DAIEDITKRMGAGMAKFICKEVES----IDDY---DEYCYYVAGLVGLGLSKLFYASGTE 190
AI + M GMA F+ + ++ I+DY +EYC+Y AG VG ++ L +G
Sbjct: 124 AAIVPPVREMVDGMADFLSRHAKAGGLRIEDYPELEEYCHYAAGTVGTLITNLLTPNGVS 183
Query: 191 DLAPDSLSNSMGLF---LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
+ L ++ G F LQ NI +D D +E + ++ P ++ + E + E
Sbjct: 184 PDRTEELYDTAGSFARLLQLVNIAKDVHADYHE--ENNVYLPATWLAEAGVEQEHVLAER 241
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
N + + T A ++D Y+ L ++P ++++GTL
Sbjct: 242 NRESVAWVVQRTATRARSFLDDAQSYLETMPLSHGNTLSAWSVPYLLSVGTL 293
>gi|448469048|ref|ZP_21600057.1| Squalene/phytoene synthase [Halorubrum kocurii JCM 14978]
gi|445809875|gb|EMA59911.1| Squalene/phytoene synthase [Halorubrum kocurii JCM 14978]
Length = 355
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 30/293 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P EP +C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP + +
Sbjct: 8 PVEPDLPWCHEAVQGVSRTFALTVDVLEEPMASHICVGYLLCRVADTVEDAGHIPPEAQS 67
Query: 92 PILIAFHRHVYDR-------------EWHFSCGTK--EYKVLMDQFHHVSTAFLELGKGY 136
+L + R + EW + + +++V+ + ++ F E
Sbjct: 68 DVLRTYRRAIDPDDDTEMAAFRDAVDEWLPAPAERNDDWEVVA-EAPTIAATFAEFDAEA 126
Query: 137 QDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASG- 188
++AI M GMA F+ + IDD DE YCYY AG VG ++ L
Sbjct: 127 REAIVPPVLEMVEGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGDI 186
Query: 189 TEDLAP--DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
TED A + GL LQ N+ +D +D E + ++ P E + + E + +
Sbjct: 187 TEDRARRLRDTAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLADEGVEQERVVHP 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
EN + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 245 ENRESSARVVDRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 297
>gi|226944180|ref|YP_002799253.1| squalene/phytoene synthase [Azotobacter vinelandii DJ]
gi|226719107|gb|ACO78278.1| Squalene/phytoene synthase [Azotobacter vinelandii DJ]
Length = 377
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 140/312 (44%), Gaps = 29/312 (9%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
A+ ++L KVSR+FAL I QL LR AV YL+ R DT+ED+ + + K AF
Sbjct: 19 AYQNAILSKVSRTFALTIPQLPPLLRRAVTNAYLLCRIADTIEDEPAFSAEEKRRYEDAF 78
Query: 98 HRHVYDR----------EWHFSCGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
V R FS T E + L+ Q V L + AI + K
Sbjct: 79 IDAVTGRIAPQYFSTELASRFSTETSEAERDLVSQLPLVLQVTNSLKPAQRMAIVNCLKV 138
Query: 147 MGAGMAKFICK----EVESIDDYDEYCYYVAGLVGLGLSKLF------YASGTEDLAPDS 196
M GM F +E++ D D YCY VAG+VG L++L AS + L
Sbjct: 139 MSHGMHDFQRNVGQHGLETLCDMDCYCYCVAGVVGEMLTELLIDFDPALASQRDPLM--R 196
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
L+ S G LQ TNI++D ED + + P++++++Y +LE+L+ + L
Sbjct: 197 LAISFGQGLQMTNILKDQWEDYR---RGVCWLPQDVFARYGVRLEELQAGRQDANYMSAL 253
Query: 257 NDMVTNALMHVEDCLKY--MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRG-VVKM 313
+++ A H+ D L+Y M R RFC +A+ TL N G VK+
Sbjct: 254 TELIGVAHAHLRDALEYTLMIPNRHSGFRRFCLWSIGLAVLTLRKLQQNPHFSAGEQVKV 313
Query: 314 RRGLTAKVIDRT 325
R A I T
Sbjct: 314 SRKAVAYTIALT 325
>gi|444918150|ref|ZP_21238228.1| Phytoene synthase [Cystobacter fuscus DSM 2262]
gi|444710046|gb|ELW51035.1| Phytoene synthase [Cystobacter fuscus DSM 2262]
Length = 344
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 138/321 (42%), Gaps = 39/321 (12%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
AFC +L VSR+FAL I L L AV + YL+ R DT+ED+ P + +A
Sbjct: 9 AFCREVLPAVSRTFALNIPVLPAPLDTAVLVAYLLCRIADTLEDEVQGPASAVLLAQLAR 68
Query: 98 HRHVYD--REWHFSCGTKEYKVLMDQFHHVSTAFLE--------LGKGYQDAIEDIT--- 144
+ + RE + +VL Q +E LG+ E +
Sbjct: 69 LSTLPEGWREDARRFTQEAARVLRAQAPAAEVRLVEGTGQVLEALGEHAAPVREHVATCL 128
Query: 145 KRMGAGMAKFICKE--------VESIDDYDEYCYYVAGLVGLGLSKLF------YASGTE 190
+ M GM + K ++S+++ EYCYYVAG VG L++LF A
Sbjct: 129 RLMTEGMGRMGSKGRASGGGLGLDSLEETLEYCYYVAGTVGEMLTRLFEWYSPEVARRAR 188
Query: 191 DLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF-W-PREIWSKYVNKLEDLKYEEN 248
L P S+ + G LQ TNI++D ED+ R F W PR + +++ E L N
Sbjct: 189 TLEPRSV--AFGNALQLTNILKDVREDLE-----RGFCWLPRTVLAEHGLTPEALLEPGN 241
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
A++ +V A + +Y+ L +H I FC P +A+ TL Y N V
Sbjct: 242 RGAALEAHGRLVAVAHRELRQAFEYVMGLPREEHGIRLFCLWPLFLAVMTLRKLYGNGRV 301
Query: 307 FR-GVVKMRRGLTAKVIDRTN 326
G VK+ R V+ T
Sbjct: 302 LEPGPVKVSRRTVKWVVAATK 322
>gi|433592065|ref|YP_007281561.1| phytoene/squalene synthetase [Natrinema pellirubrum DSM 15624]
gi|448334400|ref|ZP_21523578.1| Squalene/phytoene synthase [Natrinema pellirubrum DSM 15624]
gi|448382920|ref|ZP_21562349.1| Squalene/phytoene synthase [Haloterrigena thermotolerans DSM 11522]
gi|433306845|gb|AGB32657.1| phytoene/squalene synthetase [Natrinema pellirubrum DSM 15624]
gi|445620286|gb|ELY73792.1| Squalene/phytoene synthase [Natrinema pellirubrum DSM 15624]
gi|445660100|gb|ELZ12897.1| Squalene/phytoene synthase [Haloterrigena thermotolerans DSM 11522]
Length = 352
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 29/304 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP + +L +
Sbjct: 20 WCYDAVHGVSRTFSITIDRLEEPMARHICLGYLLCRIADTIEDAGHIPPARQTELLTRYD 79
Query: 99 R------------HVYDRE-WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R + D E W +++V+ + V F L + ++ + D +
Sbjct: 80 RLLDPDATESVDAFMDDIEPWIPDDRNDDWEVVA-RTPRVLRTFESLDEEPREIMRDPVR 138
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F + +++I++ +EYC+Y AG VG ++ L ++D A +
Sbjct: 139 ELVDGMAMFTDRYADEGGLRLQTIEELEEYCWYAAGTVGTLITGLVARGTSQDRADEMRE 198
Query: 199 N--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
N S L LQ NI +D +D E + ++ P E + +E + E + +
Sbjct: 199 NARSFALLLQLVNIAKDVDDDYRE--ENNVYLPAEWLAAEDVDVEAVTDEAHHGGVTNVI 256
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRGVVK 312
+ A +++D +Y+ + +H R AIP ++A+GTL E V G VK
Sbjct: 257 KRVTGRAESYLDDAQRYLEVVPEHNGNRLSAWAIPYLLAVGTLRELRERPEDVVREGDVK 316
Query: 313 MRRG 316
+ R
Sbjct: 317 VSRA 320
>gi|430805870|ref|ZP_19432985.1| squalene/phytoene synthase [Cupriavidus sp. HMR-1]
gi|429501862|gb|ELA00187.1| squalene/phytoene synthase [Cupriavidus sp. HMR-1]
Length = 359
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 134/301 (44%), Gaps = 33/301 (10%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P+ AF +L VSRSF L ++ L +R+ V + YL+ RA DT+ D + IP ++
Sbjct: 8 PNPNRAFLLGPLLKGVSRSFYLTLRILPEGMRDPVGLAYLLARAADTIADTSLIPPAQRL 67
Query: 92 PILIAFHRHVYDREWHFSCG------------TKEYKVLMDQFHHVSTAFLELGKGYQDA 139
+L+A +HV + S + KVL++ +L + A
Sbjct: 68 DLLLALRQHVNGTQNDGSLAQWLSAEVASQQTQSDEKVLLESIGPALGVLSQLDASDRTA 127
Query: 140 IEDITKRMGAGMA----------KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA--S 187
+ I + GM + ++D+ D Y Y VAG VG + + YA
Sbjct: 128 VRGIVDTLTEGMEFDLVTFPDERSGQVAALRTMDELDRYTYLVAGCVGEFWTTMTYAHQP 187
Query: 188 GTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
GT AP+++ G LQ N++RD +D+ I +C + P E+ ++ DL
Sbjct: 188 GTLTAAPETMLRRGVRFGKALQMVNVLRDCGKDLR-IGRC--YLPTEVLERHGMTPRDLM 244
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYN 302
N+ +A L++++ +L H + + Y A+ AI R C P ++ + TL L
Sbjct: 245 DPANALRARPILDELLHVSLAHFREAMAYTFAIPRTAIRLRLACLWPILIGLETLQLLAG 304
Query: 303 N 303
N
Sbjct: 305 N 305
>gi|448737640|ref|ZP_21719677.1| Squalene/phytoene synthase [Halococcus thailandensis JCM 13552]
gi|445803517|gb|EMA53810.1| Squalene/phytoene synthase [Halococcus thailandensis JCM 13552]
Length = 349
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 37/308 (12%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ L SR+FA+ + L + +C+ YL+ R DT+ED IP +V+ +L +
Sbjct: 13 WCHDALDGTSRTFAITVDLLDEPMATQICVSYLLCRIADTIEDAGHIPPNVQSTLLRDYD 72
Query: 99 R-------HVYD------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R H + W G ++++V+ + V AF L + A+ D +
Sbjct: 73 RVLDPDDDHTIEAFEHAVEPWLPDDGGEDWRVVANA-PRVLRAFESLAPDARAAVLDPIR 131
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD--- 195
+ +GMA F+ + +E+I++ +EYC+Y AG VG ++ L D P+
Sbjct: 132 ELVSGMALFVERHADTDGLRIETIEELEEYCWYAAGTVGTLVTNLL----ARDAGPERTR 187
Query: 196 ---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
S L LQ N+ +D +D E + ++ P E E++ N+
Sbjct: 188 KLRETDRSFSLLLQLVNVAKDVSDDYRE--ENNVYLPMEWLRAEDVDPENVCEPSNTQSV 245
Query: 253 VQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTL-ALCYNNIEVFR- 308
+ + + A + +D +Y++A + A+P ++AIGTL L +V R
Sbjct: 246 ARVIRRVTDRAESYADDARRYLAAAPETNGNTLAAWAVPYLLAIGTLRELDARAEDVLRE 305
Query: 309 GVVKMRRG 316
G VK+ R
Sbjct: 306 GGVKISRA 313
>gi|448352294|ref|ZP_21541085.1| squalene/phytoene synthase [Natrialba taiwanensis DSM 12281]
gi|445631674|gb|ELY84903.1| squalene/phytoene synthase [Natrialba taiwanensis DSM 12281]
Length = 350
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 33/323 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q+E + W CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQSEHTTDADMEW--CYDAVHGVSRTFSITIDRLEEPMAKHICLGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHR-----------HVYDREWHFSCG----TKEYKVLMDQFHHVS 126
IP + +L + R D + G + +++V+ + V+
Sbjct: 59 AGHIPPAEQTALLSTYDRLLDPNAAQSLESFMDDIEPWLPGPENRSNDWEVVANTPRVVA 118
Query: 127 TAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLG 179
T F L + ++ + + + + GMA F + ++++D+ +EYC+Y AG VG
Sbjct: 119 T-FETLDEEPREIMREPVRELVDGMAMFTDRYADEGGLRLQTLDELEEYCWYAAGTVGTL 177
Query: 180 LSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
++ L S + D A + N S L LQ NI +D D +E + ++ P E ++
Sbjct: 178 ITGLVARSASPDRAAEMRDNARSFALLLQLVNIAKDVETDYHE--ENNVYLPAEWLAEEN 235
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIG 295
+E + EN + + A +++D +Y+ + + R AIP ++A+G
Sbjct: 236 VDIEAVTEVENKSGVTNVVKRITGRAETYLDDAQRYLEVVPECHGNRLSAWAIPYLLAVG 295
Query: 296 TLALCYNNIE--VFRGVVKMRRG 316
T+ E V G VK+ R
Sbjct: 296 TMRELRERPEDVVEEGNVKIARA 318
>gi|448449559|ref|ZP_21591784.1| Squalene/phytoene synthase [Halorubrum litoreum JCM 13561]
gi|448480376|ref|ZP_21604551.1| Squalene/phytoene synthase [Halorubrum arcis JCM 13916]
gi|448507293|ref|ZP_21614911.1| Squalene/phytoene synthase [Halorubrum distributum JCM 9100]
gi|448523809|ref|ZP_21618996.1| Squalene/phytoene synthase [Halorubrum distributum JCM 10118]
gi|445698662|gb|ELZ50702.1| Squalene/phytoene synthase [Halorubrum distributum JCM 9100]
gi|445700882|gb|ELZ52873.1| Squalene/phytoene synthase [Halorubrum distributum JCM 10118]
gi|445813188|gb|EMA63169.1| Squalene/phytoene synthase [Halorubrum litoreum JCM 13561]
gi|445822163|gb|EMA71936.1| Squalene/phytoene synthase [Halorubrum arcis JCM 13916]
Length = 353
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 34/297 (11%)
Query: 29 KQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTD 88
+ P E A+C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP D
Sbjct: 5 EHAPGEADLAWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGHIPPD 64
Query: 89 VKVPILIAFHRHVYD-------------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKG 135
+ +L + R + EW + ++ V+ + ++ F EL
Sbjct: 65 AQSDVLRTYRRAIDPDDETDIGQFREAVDEWLPAERDDDWTVVA-EAPTIAATFEELDPE 123
Query: 136 YQDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASG 188
Q AI M GMA F+ + IDD +E YCYY AG VG ++ L
Sbjct: 124 AQAAIVPPVLEMVDGMAMFVDRHATEGGLRIDDREELEQYCYYAAGTVGNLITNLLT--- 180
Query: 189 TEDLAPD------SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
ED+ + + GL LQ N+ +D +D E + ++ P E E
Sbjct: 181 REDIGEERAERLRETAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLEAEGVDQER 238
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
+ + EN + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 239 VVHPENRESSARVVDRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 295
>gi|294500619|ref|YP_003564319.1| squalene/phytoene synthase [Bacillus megaterium QM B1551]
gi|294350556|gb|ADE70885.1| squalene/phytoene synthase [Bacillus megaterium QM B1551]
Length = 272
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML + SR+F + I L +L++AV YL +RA+D +ED + VK +L A +
Sbjct: 14 MLKETSRTFFIPISHLPAELQDAVGSAYLCMRAIDEIEDHPELEAGVKSRLLYAISDLL- 72
Query: 103 DREWHFSCGTKEYKVLMDQFH-HVSTAFLELGK-------GYQDAIEDITKRMGAGMAKF 154
S EY L+ + + L+LG G D + D T M GMA +
Sbjct: 73 ----KKSFNEDEYMALVGPYQADLPDVTLQLGNWIALCPTGVADQVLDATSIMAKGMADW 128
Query: 155 ICKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+ K+ +++ D D+Y +YVAGLVG+ L+ ++ + GTE L+ + G LQ NI+
Sbjct: 129 VEKDWHIQNEADLDDYTFYVAGLVGVMLNDIWKWYDGTE--TDKELAIAFGRGLQSVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED + F+P WS+ DM A ++
Sbjct: 187 RNTSEDSE---RGVSFFPNN-WSR---------------------EDMFAYARRNLSLGK 221
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNM 328
KY+ ++ I FC IP +A GTL + +G KM R K ++ +M
Sbjct: 222 KYLEDVKSLPILHFCKIPLALADGTLN------ALMKGKEKMTRDDVNKTVNEVVDM 272
>gi|190715292|dbj|BAG49463.1| farnesyl transferase [Saccharomyces pastorianus]
Length = 187
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 70/118 (59%)
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVF 307
N + C+N +V NAL HV D L Y++++ + + F+FCAIPQ+MAI TLAL +NN EV
Sbjct: 1 NEQLGLDCINHLVLNALSHVIDVLTYLASIHEQSTFQFCAIPQVMAIATLALVFNNREVL 60
Query: 308 RGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 365
G VK+R+G T +I ++ + F + +K K+ DPN K ++ I++
Sbjct: 61 HGNVKIRKGTTCYLILKSRTLRGCVEIFDYYLRDIKSKLAVQDPNFLKLNIQISKIEQ 118
>gi|448397752|ref|ZP_21569785.1| Squalene/phytoene synthase [Haloterrigena limicola JCM 13563]
gi|445672851|gb|ELZ25422.1| Squalene/phytoene synthase [Haloterrigena limicola JCM 13563]
Length = 348
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 29/316 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
+ + P + +CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP
Sbjct: 4 GQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICLGYLLCRIADTIEDAGHIP 63
Query: 87 TDVKVPILIAFHRHV-YDRE------------WHFSCGTKEYKVLMDQFHHVSTAFLELG 133
+ + +L + + D E W T +++V+ + + T F L
Sbjct: 64 PETQTELLSTYDELLDPDAEQSVASFMDDVEPWIPEERTDDWEVVAETPRVLRT-FESLD 122
Query: 134 KGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYA 186
+ ++ + + + + GMA F + +++I++ +EYC+Y AG VG ++ L
Sbjct: 123 EKPREIMREPVRELVDGMAMFTSRYANEGGLRLQTIEELEEYCWYAAGTVGTLITGLVAR 182
Query: 187 SGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+++ A + N S L LQ NI +D +D +E + ++ P E + +E +
Sbjct: 183 GTSQERAEEMRENARSFALLLQLVNIAKDVDDDYHE--ENNVYLPAEWLAAEDVDVEAVT 240
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYN 302
E + + + A +++D +Y+ + + R AIP ++A+GTL
Sbjct: 241 DEAHQGGVTNVIKRVTGRAERYLDDAQRYLEIVPEQHGNRLSAWAIPYLLAVGTLRELRE 300
Query: 303 NIE--VFRGVVKMRRG 316
E V G VK+ R
Sbjct: 301 RPEDVVREGDVKVSRA 316
>gi|226225867|ref|YP_002759973.1| farnesyl-diphosphate farnesyltransferase [Gemmatimonas aurantiaca
T-27]
gi|226089058|dbj|BAH37503.1| farnesyl-diphosphate farnesyltransferase [Gemmatimonas aurantiaca
T-27]
Length = 352
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 28/282 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FC ++L VSR+FAL I+ L DL AV YL+ R DTVED I DVK + F
Sbjct: 19 FCEAILPAVSRTFALGIKVLPGDLGQAVLDAYLLCRIADTVEDAPGIEPDVKAALFDDFL 78
Query: 99 RHVYDRE--WHFSCGTKEYKVLMDQFHHVSTA---------FLELGKGYQDAIEDITKRM 147
D F+ G + L H++ F L + QD + M
Sbjct: 79 ASFTDAAALTRFTAGV---EALTGDLAHLTLTRNTSLVLEHFSRLPQRTQDVVRHWVAEM 135
Query: 148 GAGMAKFICK-----EVESIDDYDEYCYYVAGLVGLGLSKLFY----ASGTEDLAP-DSL 197
GM KF+ ++++D+Y EYCYYVAG VG L+ L++ + G + A
Sbjct: 136 SVGMRKFVLLYPNGIRIQTVDEYKEYCYYVAGTVGYMLTDLWHEHSPSIGAQRYAILRER 195
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
+ LQ NI++D D + + ++ P+E+ + + + E K L+
Sbjct: 196 CRAFAEALQTVNILKDVAVDAEK--ENSVYVPQELLEAHGSTQSRILAPELLSKNRAALS 253
Query: 258 DMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTL 297
++ A +E+ Y+ + R +I FC +P ++A TL
Sbjct: 254 QLIQLAWHDLEEARIYLLDIPRRAVSIRLFCILPLLLAYATL 295
>gi|448505910|ref|ZP_21614313.1| Squalene/phytoene synthase [Halorubrum distributum JCM 9100]
gi|448515794|ref|ZP_21617083.1| Squalene/phytoene synthase [Halorubrum distributum JCM 10118]
gi|445700206|gb|ELZ52214.1| Squalene/phytoene synthase [Halorubrum distributum JCM 9100]
gi|445707127|gb|ELZ58988.1| Squalene/phytoene synthase [Halorubrum distributum JCM 10118]
Length = 355
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 27/291 (9%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P +P A+C+ + VSR+FAL I L L + +C+ YL+ R DT+ED T I T+ +
Sbjct: 8 PSKPPLAYCHDAVQDVSRTFALTIDALDPPLADQICVGYLLCRIPDTIEDSTHISTETQQ 67
Query: 92 PILIAFHR----------HVYDREWHFSCGTKEYKV---LMDQFHHVSTAFLELGKGYQD 138
+L ++ V+ R+ T+ L+ V AF + + Q+
Sbjct: 68 RLLRTYYASLDPESPTSIEVFTRQARQYISTQSPVADWELVGNTPTVMAAFEQFSQDTQE 127
Query: 139 AIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
A+ + M GM +F + ++++ + YC+YVAG VG ++ L
Sbjct: 128 AMRPPIREMITGMIRFTGRYADEPGIRIQTLIELRSYCHYVAGTVGTLITNLLAKQPLTT 187
Query: 192 LAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
++L + G LQ NI +D ED + + ++ P E + + + + +
Sbjct: 188 SREEALRRNAEHFGRLLQLVNIAKDVHEDY--VTENNVYLPSEWLAAEGIPQDQIIHTDY 245
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMS--ALRDHAIFRFCAIPQIMAIGTL 297
+ A+ L+ ++ A H++ Y+ L + A+P ++A+GTL
Sbjct: 246 QEGAISVLSRVLEQANQHLDAAQSYIEKMPLGNGNTVVAWAVPYLLAVGTL 296
>gi|345004717|ref|YP_004807570.1| squalene synthase [halophilic archaeon DL31]
gi|344320343|gb|AEN05197.1| Squalene synthase [halophilic archaeon DL31]
Length = 357
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 37/299 (12%)
Query: 33 PEPH-------WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI 85
P+PH +C+ + VSR+FAL + L + + +C+ YL+ R DTVED + I
Sbjct: 4 PDPHPDVPNADLEWCHEAVQDVSRTFALTVDVLEEPMSSYICLGYLLCRVADTVEDASHI 63
Query: 86 PTDVKVPILIAFHRHVYD-------------REWHFSCGTKEYK-VLMDQFHHVSTAFLE 131
P + + +L F + +EW +E ++ + + F +
Sbjct: 64 PPEEQAALLRQFDAALDSDSEADIETFASNVQEWLPEEAEREVDWTVVKEAPRIVGTFEK 123
Query: 132 LGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLF 184
L +DA+ + M GM+ F+ + ++ + +EYCYY AG VG ++ L
Sbjct: 124 LPADVRDAVTPPVREMVTGMSVFLERYADEGGLRIQDRAELEEYCYYAAGTVGTLITNLV 183
Query: 185 YASGTEDLAP---DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLE 241
+D D + GL LQ N+ +D +D + ++ P E W + +
Sbjct: 184 TRGEVDDARERTLDETAEGFGLLLQLVNVSKDVYDDFEH--ENNVYLPAE-WLEEEGVAQ 240
Query: 242 DLKYEENSDKAVQCLNDMVTN-ALMHVEDCLKYMS--ALRDHAIFRFCAIPQIMAIGTL 297
D + + + V + T+ A +V+D Y+ LRD A+P ++A+GTL
Sbjct: 241 DAVLDPENREGVAAVVHRTTDLARSYVDDAATYLQHVPLRDGNTLEAWAVPFLLAVGTL 299
>gi|384045527|ref|YP_005493544.1| Farnesyl-diphosphate farnesyltransferase [Bacillus megaterium
WSH-002]
gi|345443218|gb|AEN88235.1| Farnesyl-diphosphate farnesyltransferase [Bacillus megaterium
WSH-002]
Length = 272
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 131/297 (44%), Gaps = 49/297 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML + SR+F + I L +L++AV YL +RA+D +ED + VK +L A +
Sbjct: 14 MLKETSRTFFIPISHLPAELQDAVGSAYLCMRAIDEIEDHPELEAGVKSRLLYAISDLL- 72
Query: 103 DREWHFSCGTKEYKVLMDQFH-HVSTAFLELGK-------GYQDAIEDITKRMGAGMAKF 154
S EY L+ + + L+LG G D + D T M GMA +
Sbjct: 73 ----KKSFNEDEYMALVGPYQADLPDVTLQLGNWIALCPTGVADQVLDATSIMAKGMADW 128
Query: 155 ICKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+ K+ +++ D D+Y +YVAGLVG+ L+ ++ + GTE L+ + G LQ NI+
Sbjct: 129 VEKDWHIQNEADLDDYTFYVAGLVGVMLNDIWKWYDGTE--TDKELAIAFGRGLQSVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED + F+P WS+ DM A ++
Sbjct: 187 RNTSEDSE---RGVSFFPNN-WSR---------------------EDMFAYARRNLSLGK 221
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNM 328
KY+ ++ I FC IP +A GTL + +G KM R K + +M
Sbjct: 222 KYLEDVKSLPILHFCKIPLALADGTLN------ALMKGKEKMTRDDVNKTVSEVVDM 272
>gi|444911881|ref|ZP_21232051.1| hypothetical protein D187_03752 [Cystobacter fuscus DSM 2262]
gi|444717528|gb|ELW58355.1| hypothetical protein D187_03752 [Cystobacter fuscus DSM 2262]
Length = 1163
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 26/298 (8%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E W FC L +VSR+FA I L +L A+ + YL+ R DT+ED S+P K P+
Sbjct: 817 EADWIFCKESLGEVSRTFARPIALLPGNLEVAMTLGYLLCRVADTIEDHPSVPLAAKEPL 876
Query: 94 LIAF------HR--HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
F H+ + + G L V F L + Q ++ T
Sbjct: 877 FACFLDVLRGHKEPEAFTEAFKPIPGQDAELALSRALPTVMRVFHTLPENIQASLARWTS 936
Query: 146 RMGAGMAKFICKE--------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
M GMA + +E + ++ D + YCY+VAG VG ++LF ++ P+
Sbjct: 937 EMARGMAIYAHRERGADGLVALHTVSDLERYCYFVAGTVGHLTTELFLEELGSEVTPEQA 996
Query: 198 ------SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
+ + G LQ NI++D +D E + F PR + + + +L +
Sbjct: 997 QTMRLHAEAFGTGLQLVNILKDVTDDREE--RGWSFIPRALCAAGGMGVAELTDPAQRTR 1054
Query: 252 AVQCLNDMVTNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTLALCYNNIEVF 307
A + + A +++D L+Y A+ A + FC +P MA +L L N +F
Sbjct: 1055 AHATVAPLFELARRNLDDGLRYALAIPATAPQLRLFCLLPLWMAARSLVLARGNDAMF 1112
>gi|30249906|ref|NP_841976.1| squalene and phytoene synthase [Nitrosomonas europaea ATCC 19718]
gi|30180943|emb|CAD85869.1| Squalene and phytoene synthases [Nitrosomonas europaea ATCC 19718]
Length = 350
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 135/318 (42%), Gaps = 28/318 (8%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF----- 97
+L VSR+FAL I QL LR V YL+ R +DTVEDD+++ + + F
Sbjct: 20 ILQGVSRTFALTIPQLPPALREVVGNAYLLCRIVDTVEDDSALTLEQTRELAEMFIEVVS 79
Query: 98 ---HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFL---ELGKGYQDAIEDITKRMGAGM 151
+ R + D H + + A+E + MG GM
Sbjct: 80 GTVEAETFARALYPLLSEHTIPAEHDLIKHTPSVIRMTHSFNPVQRQALERCIRIMGQGM 139
Query: 152 AKFICKE----VESIDDYDEYCYYVAGLVGLGLSKLF--YASGTEDLAPD--SLSNSMGL 203
A + E +E++ + D YCY+VAG+VG L++LF Y+ P LS S G
Sbjct: 140 AAYQESESLSGLENLAEMDRYCYHVAGVVGEMLTELFCDYSPEINQHKPALMQLSVSFGQ 199
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
LQ TNI++D ED + + PR+I+ + L DL+ L ++ A
Sbjct: 200 GLQMTNILKDIWEDRK---RGACWLPRDIFLQEGFDLNDLQPGCPERGFHAGLGTLIGIA 256
Query: 264 LMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 321
H+++ L Y + H + RFC + AIG L N I R + R ++
Sbjct: 257 KTHLQNALAYTCLIPSHEAGVRRFC----LWAIGMAVLTLNKINHKRDFITGREVKISRR 312
Query: 322 IDRTNNMTDVYLAFYDFS 339
R + LA D++
Sbjct: 313 SVRATVLITSLLASQDWA 330
>gi|289581968|ref|YP_003480434.1| squalene/phytoene synthase [Natrialba magadii ATCC 43099]
gi|448282619|ref|ZP_21473905.1| squalene/phytoene synthase [Natrialba magadii ATCC 43099]
gi|289531521|gb|ADD05872.1| Squalene/phytoene synthase [Natrialba magadii ATCC 43099]
gi|445576161|gb|ELY30620.1| squalene/phytoene synthase [Natrialba magadii ATCC 43099]
Length = 350
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 141/307 (45%), Gaps = 33/307 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP + +L +
Sbjct: 16 WCYDAVHGVSRTFSITIDRLEEPMSKHICLGYLLCRIADTIEDAGHIPPAEQTELLTEYD 75
Query: 99 RHVYDREWHFSCG----------------TKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
R + D E S + ++ V+ + + T F L + ++ + +
Sbjct: 76 R-LLDPESEQSVEAFMTDVEPWIPEPAERSNDWDVVAETPRVLRT-FESLDEEPREIMRE 133
Query: 143 ITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
+ + GMA F + ++++++ +EYC+Y AG VG ++ L +++ A +
Sbjct: 134 PVRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASKERAAE 193
Query: 196 SLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
N S L LQ NI +D D +E + ++ P E ++ L+ + EEN +
Sbjct: 194 MRDNARSFALLLQLVNIAKDVESDYHE--ENNVYLPAEWLAEENVDLDAVTDEENHNGVT 251
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRG 309
+ + A +++D +Y+ + + R AIP ++A+GT+ E V G
Sbjct: 252 NVVERVTGRAETYLDDAQRYLEVVPEQHGNRLSAWAIPYLLAVGTMRELRERPEDVVEEG 311
Query: 310 VVKMRRG 316
VK+ R
Sbjct: 312 DVKVPRA 318
>gi|448455674|ref|ZP_21594693.1| Squalene/phytoene synthase [Halorubrum lipolyticum DSM 21995]
gi|445813342|gb|EMA63321.1| Squalene/phytoene synthase [Halorubrum lipolyticum DSM 21995]
Length = 355
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 30/293 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P EP +C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP + +
Sbjct: 8 PVEPDLQWCHEAVQGVSRTFALTVDVLEEPMASHICVGYLLCRVADTVEDAGHIPPEAQS 67
Query: 92 PILIAFHRHVYDR-------------EWHFSCGTK--EYKVLMDQFHHVSTAFLELGKGY 136
+L + R + EW + + +++V+ + ++ F E
Sbjct: 68 DVLRTYRRAIDPDDDTEVAAFRDAVDEWLPAPAERNDDWEVVA-EAPTIAATFEEFEPEA 126
Query: 137 QDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASG- 188
++AI M GMA F+ + IDD DE YCYY AG VG ++ L
Sbjct: 127 REAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGDV 186
Query: 189 TEDLAP--DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYE 246
TED A + GL LQ N+ +D +D E + ++ P E E + +
Sbjct: 187 TEDRARRLRDTAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLEAEGVDQERVVHP 244
Query: 247 ENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
EN + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 245 ENRESSARVVDRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 297
>gi|339482989|ref|YP_004694775.1| Squalene/phytoene synthase [Nitrosomonas sp. Is79A3]
gi|338805134|gb|AEJ01376.1| Squalene/phytoene synthase [Nitrosomonas sp. Is79A3]
Length = 356
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 48/297 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL LR + YL+ R DT+EDD+++ + + F V
Sbjct: 17 ILQGVSRTFALTIPQLPESLRRVIGNAYLLCRITDTIEDDSALTMEQTRQLSHMFSEVV- 75
Query: 103 DREWHFSCGTKEYKVLMDQFH-----HVSTAFLELGKG--------------YQDAIEDI 143
CG + + H H A +L K ++A+E
Sbjct: 76 -------CGNTSAEDFAQKLHPLLSGHTIPAEHDLVKNTPAVIRITHSFNPTQRNALERC 128
Query: 144 TKRMGAGMAKFICKEVESIDDY------DEYCYYVAGLVGLGLSKLF--YASGTEDLAPD 195
+ M GM+ + +E ES++ ++YCYYVAG+VG L++LF Y+ P
Sbjct: 129 VRIMAQGMSDY--QETESLEGLKDLSAMNQYCYYVAGVVGEMLTELFCDYSEEINSHKPT 186
Query: 196 --SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
LS S G LQ TNI++D +D + + P++I+ K L DL+ + K
Sbjct: 187 LMKLSVSFGQGLQMTNILKDIWDDRK---RGACWLPQDIFLKNGFNLADLQPGTSDTKFQ 243
Query: 254 QCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEVFR 308
L +++ A H+++ L Y S + ++ I RFC + AIG L N I R
Sbjct: 244 AGLAELLGVAKEHLQNALIYTSLIPPQEKGIRRFC----LWAIGMAILTLNKINQHR 296
>gi|448374176|ref|ZP_21558061.1| squalene/phytoene synthase [Halovivax asiaticus JCM 14624]
gi|445660853|gb|ELZ13648.1| squalene/phytoene synthase [Halovivax asiaticus JCM 14624]
Length = 350
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 49/323 (15%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ +H VSR+F++ I +L + +C+ YL+ R DT+ED +P + +L +
Sbjct: 16 WCFDAVHGVSRTFSITIDRLEEPMARQICVGYLLCRIADTIEDAGHVPPSAQSDLLTEYD 75
Query: 99 RHVYDREWHFSCGTKEYKVLMDQF------------------------HHVSTAFLELGK 134
R T EY V DQF V AF L
Sbjct: 76 R--------LLDPTDEYTV--DQFVDAVSPWLPEPDERSADWTVVAETARVFRAFETLDD 125
Query: 135 GYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYAS 187
++ + D + + GMA F + +++ID+ +EYC+Y AG VG +++L
Sbjct: 126 EPRELMRDPIRELVGGMAMFTERYADEGGLRLQTIDELEEYCWYAAGTVGTLITELLVRD 185
Query: 188 GTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY 245
+ + + N S L LQ NI +D D +E + ++ P E ++ + +
Sbjct: 186 SSPERTAELRDNARSFALLLQLVNIAKDVRSDYHE--ENNVYLPAEWLAEEAVAPDAVTD 243
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTL-ALCYN 302
+N + + +V A +++D +Y+ L +H AIP ++A+GTL L
Sbjct: 244 TDNHQEVTTVVRRVVDRAERYLDDAHRYLEILPEHRGNNLSAWAIPYLLAVGTLRELRQR 303
Query: 303 NIEVFR-GVVKMRRGLTAKVIDR 324
+ +V R G VK+ R VI R
Sbjct: 304 SKDVVRTGDVKLAREEVYTVIQR 326
>gi|448473556|ref|ZP_21601698.1| Squalene/phytoene synthase [Halorubrum aidingense JCM 13560]
gi|445819068|gb|EMA68917.1| Squalene/phytoene synthase [Halorubrum aidingense JCM 13560]
Length = 355
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 36/296 (12%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P EP +C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP +
Sbjct: 8 PVEPDLPWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGHIPPQAQS 67
Query: 92 PILIAFHRHVYDR-------------EWHFSCGTK--EYKVLMDQFHHVSTAFLELGKGY 136
+L + R + EW + +++V+ + ++ F EL
Sbjct: 68 DVLRTYRRAIDPDDDTDILAFRDAVDEWLPEPADRNDDWEVVA-EAPTIAATFEELDPEA 126
Query: 137 QDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASGT 189
Q AI M GMA F+ + IDD DE YCYY AG VG ++ L
Sbjct: 127 QAAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRG-- 184
Query: 190 EDLAPD------SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
DL D + GL LQ N+ +D +D E + ++ P E + E +
Sbjct: 185 -DLPEDRANRLRDTAEEFGLLLQLVNVSKDVYDDFTE--ENNVYLPAEWLADEGVDQERV 241
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
EN + + + + A ++D Y+ L + +P ++A+GTL
Sbjct: 242 VDPENRESSARVVGRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 297
>gi|344940455|ref|ZP_08779743.1| Squalene/phytoene synthase [Methylobacter tundripaludum SV96]
gi|344261647|gb|EGW21918.1| Squalene/phytoene synthase [Methylobacter tundripaludum SV96]
Length = 399
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 30/287 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL L AV YL+ R +DT+ED+ S+ + K F H+
Sbjct: 59 LLEGVSRTFALTIPQLPEKLYGAVANAYLLCRIVDTIEDEVSLSPEQKKYFCSEF-IHIV 117
Query: 103 DREWHFSCGTKEYKVLMDQ--------FHHVSTAFLELGKGYQ----DAIEDITKRMGAG 150
+ E L+ + HV +++ + +A+ + M G
Sbjct: 118 KTGTNSEPFAVELAPLLSEQTIPAEHTLIHVLPRVIQITHKFDPDQIEALASCVETMAEG 177
Query: 151 MAKFICKEVE----SIDDYDEYCYYVAGLVGLGLSKLF------YASGTEDLAPDSLSNS 200
M F +++ ++ D D YCYYVAG VG L+KLF A ++L SLS S
Sbjct: 178 MPIFQAQDLHGGLATLADMDRYCYYVAGCVGEMLAKLFCHYSPEIAQHKDELL--SLSVS 235
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
G LQ TNI++D +D + + P++I+++ L++L E +S+ L ++
Sbjct: 236 FGQGLQMTNILKDIWDDAE---RGVCWLPQDIFTETGFDLKNLTPETHSENFSLGLEHLI 292
Query: 261 TNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIE 305
+ A H+ + LKY L H I FC MA+ TL N++
Sbjct: 293 SIAHGHLHNALKYTLLLPTHETGIRNFCLWALGMAVLTLKKIKQNLD 339
>gi|448355546|ref|ZP_21544297.1| squalene/phytoene synthase [Natrialba hulunbeirensis JCM 10989]
gi|445635074|gb|ELY88246.1| squalene/phytoene synthase [Natrialba hulunbeirensis JCM 10989]
Length = 350
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 31/306 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +C+ YL+ R DT+ED IP + +L +
Sbjct: 16 WCYDAVHGVSRTFSITIDRLEEPMSKHICLGYLLCRIADTIEDAGHIPPAEQTELLTEYD 75
Query: 99 R------------HVYDRE-W--HFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI 143
R + D E W + + ++ V+ + + T F L + ++ + +
Sbjct: 76 RLLDPDTDQSVEAFMADVEPWIPEPADRSNDWDVVAETPRVLQT-FESLDEEPREIMREP 134
Query: 144 TKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS 196
+ + GMA F + ++++++ +EYC+Y AG VG ++ L +++ A +
Sbjct: 135 VRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASQERAAEM 194
Query: 197 LSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
N S L LQ NI +D D +E + ++ P E ++ L+ + EEN +
Sbjct: 195 RDNARSFALLLQLVNIAKDVESDYHE--ENNVYLPAEWLAEEDVDLDAVTDEENHNGVTN 252
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRGV 310
+ + A +++D +Y+ + + R AIP ++A+GT+ E V G
Sbjct: 253 VVERVTGRAETYLDDAQRYLEVVPEQHGNRLSAWAIPYLLAVGTMRELRERPEDVVEEGD 312
Query: 311 VKMRRG 316
VK+ R
Sbjct: 313 VKVPRA 318
>gi|333371814|ref|ZP_08463755.1| squalene/phytoene synthase [Desmospora sp. 8437]
gi|332975543|gb|EGK12433.1| squalene/phytoene synthase [Desmospora sp. 8437]
Length = 268
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 43/293 (14%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA----FH 98
+L + SR+F + I +L +L+ AV YL +RA+D +ED +P++ KV +L +
Sbjct: 10 VLRQTSRTFFIPISRLPAELKEAVAASYLCMRAIDEIEDHPRLPSEPKVSLLRSIGKILR 69
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL-GKGYQDAIEDITKRMGAGMAKFICK 157
+ D+E + + YK + + ++++ Q I T M GMA+++ K
Sbjct: 70 KPFNDQE--LATVLQPYKNFLPEVTLRMADWVKMIPSAIQQNILRSTATMAEGMAEWVSK 127
Query: 158 E--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRDY 214
+ V + ++ D+Y YYVAGLVG+ L+ L+ + GT+ A L+ + G LQ NI+R+
Sbjct: 128 KWNVHTKEELDQYTYYVAGLVGVLLNDLWKWYDGTD--ADQDLAVAYGRGLQAVNILRNR 185
Query: 215 LEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED++ + F+P + W +++M A H+ Y
Sbjct: 186 EEDLS---RGVDFFP-DGWG---------------------VDEMFAYARHHLAQADIYT 220
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
+++ + FC IP ++A GTL G K+ R +++++
Sbjct: 221 DSIQSPPVLDFCKIPLVLAHGTLQAMEE------GAEKLSRAEVTQLVEKATG 267
>gi|448305100|ref|ZP_21495034.1| squalene/phytoene synthase [Natronorubrum sulfidifaciens JCM 14089]
gi|445589635|gb|ELY43863.1| squalene/phytoene synthase [Natronorubrum sulfidifaciens JCM 14089]
Length = 348
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 138/304 (45%), Gaps = 31/304 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +CI YL+ R DT+ED IP D + +L +
Sbjct: 16 WCYDAVHGVSRTFSITIDRLEEPMARHICIGYLLCRVADTIEDAGHIPPDTQTELLTTYD 75
Query: 99 RHVYDRE--------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDIT 144
+ + D E W ++++ V+ + + T F L + ++ + +
Sbjct: 76 Q-LLDPETDQSVSAFMDDLEPWIPDERSEDWNVVAETPRVLRT-FESLDEEPREIMREPV 133
Query: 145 KRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
+ + GMA F + ++++++ +EYC+Y AG VG ++ L + + A +
Sbjct: 134 RELVDGMAMFTSRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASPNRAEEMR 193
Query: 198 SN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
N S L LQ NI +D D ++ + ++ P E +E + +N
Sbjct: 194 ENARSFALLLQLVNIAKDVESDYHD--ENNVYLPAEWLEAEDVDVEQVTDADNHGGVTNV 251
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRGVV 311
+ + A +++D +Y+ + + R AIP ++A+GT+ E + G V
Sbjct: 252 IKRVTGRAETYLDDAHRYLEVVPETHGNRLSAWAIPYLLAVGTMRELRERPEDVIREGDV 311
Query: 312 KMRR 315
K+ R
Sbjct: 312 KVSR 315
>gi|448363066|ref|ZP_21551669.1| squalene/phytoene synthase [Natrialba asiatica DSM 12278]
gi|445647035|gb|ELZ00015.1| squalene/phytoene synthase [Natrialba asiatica DSM 12278]
Length = 351
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 33/323 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q+E + W CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQSEHTTDADMEW--CYDAVHGVSRTFSITIDRLEEPMAKHICLGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHRHVYDREWHF---------------SCGTKEYKVLMDQFHHVS 126
IP + +L + R + H + +++V+ + ++
Sbjct: 59 AGHIPPAEQTALLSTYDRLLDPNAAHSLESFMDDIEPWLPGPENRSNDWEVVANTPRVLA 118
Query: 127 TAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLG 179
T F L + ++ + + + + GMA F + ++++D+ +EYC+Y AG VG
Sbjct: 119 T-FETLDEEPREIMREPVRELVDGMAMFTDRYADEGGLRLQTLDELEEYCWYAAGTVGTL 177
Query: 180 LSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
++ L + + A + N S L LQ NI +D D +E + ++ P E ++
Sbjct: 178 ITGLVARGASPERAAEMRDNARSFALLLQLVNIAKDVETDYHE--ENNVYLPAEWLAEED 235
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIG 295
+E + EN + + A +++D +Y+ + + R AIP ++A+G
Sbjct: 236 VDVEAVTEVENKSGVTNVVKRITGRAETYLDDAQRYLEVVPECHGNRLSAWAIPYLLAVG 295
Query: 296 TLALCYNNIE--VFRGVVKMRRG 316
T+ E V G VK+ R
Sbjct: 296 TMRELRERPEDVVEEGNVKIARA 318
>gi|448515562|ref|ZP_21617054.1| Squalene/phytoene synthase [Halorubrum distributum JCM 10118]
gi|445707160|gb|ELZ59020.1| Squalene/phytoene synthase [Halorubrum distributum JCM 10118]
Length = 350
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 36/295 (12%)
Query: 33 PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVP 92
PEP A+C+ + VSR+FAL ++ L + + +C+ YL+ R DT+ED + + +V
Sbjct: 7 PEPDIAWCHEAVQDVSRTFALTVEVLEEPMSSHICLGYLLCRVADTIEDAGHVSPESQVK 66
Query: 93 ILIAFHRHVYDREWHFSCGT-KEYKVLMD-----------------QFHHVSTAFLELGK 134
+L F +Y S GT E++ +D Q + F +
Sbjct: 67 LLRTFDAALYP----ASNGTMNEFRAAVDGWLPPSADRSADWSVVAQSPTIWATFTNQPE 122
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYAS 187
Q A+ + + M GMA F+ + ++ I+D E YCYY AG VG ++ L
Sbjct: 123 SVQTAVIPLVREMVDGMAMFVERYADTGGLRINDRSELEQYCYYAAGTVGRLITNLLTRG 182
Query: 188 GTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
L ++ GL LQ N+ +D +D E + ++ P E + E +
Sbjct: 183 NVSQKRAQRLYDTADEFGLLLQMVNVSKDVYDDYTE--ENNVYLPAEWLADEGIDQESIL 240
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
+N + A + + A ++D Y+ A L +IP ++ +GT+
Sbjct: 241 RTDNREPAANVVERTASYAGTFLDDAQTYIEAMPLTHGNTMAAWSIPYLLGVGTI 295
>gi|448309935|ref|ZP_21499788.1| squalene/phytoene synthase [Natronorubrum bangense JCM 10635]
gi|445588956|gb|ELY43195.1| squalene/phytoene synthase [Natronorubrum bangense JCM 10635]
Length = 348
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY +H VSR+F++ I +L + +CI YL+ R DT+ED IP D + +L +
Sbjct: 16 WCYDAVHGVSRTFSITIDRLEEPMARHICIGYLLCRVADTIEDAGHIPPDTQTELLTTYD 75
Query: 99 RHVYDRE--------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDIT 144
+ + D E W ++++ V+ + + T F L + ++ + +
Sbjct: 76 Q-LLDPESEQTVSAFMDDIEPWIPDERSEDWNVVAETPRVLRT-FESLDEEPREIMREPV 133
Query: 145 KRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
+ + GMA F + ++++++ +EYC+Y AG VG ++ L +++ A +
Sbjct: 134 RELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASQNRAEEMR 193
Query: 198 SN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
N S L LQ NI +D D ++ + ++ P E +E + +N
Sbjct: 194 ENARSFALLLQLVNIAKDVESDYHD--ENNVYLPAEWLEAEDVDVEQVTDADNHGGVTNV 251
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCYNNIE--VFRGVV 311
+ + A +++D +Y+ + + R AIP ++A+GT+ E + G V
Sbjct: 252 IKRVTGRAETYLDDAHRYLEVVPETHGNRLSAWAIPYLLAVGTMRELRERPEDVIREGDV 311
Query: 312 KMRR 315
K+ R
Sbjct: 312 KVSR 315
>gi|448423497|ref|ZP_21582026.1| Squalene/phytoene synthase [Halorubrum terrestre JCM 10247]
gi|445683334|gb|ELZ35733.1| Squalene/phytoene synthase [Halorubrum terrestre JCM 10247]
Length = 353
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E A+C+ + VSR+FAL + L + + +C+ YL+ R DTVED IP D + +
Sbjct: 10 EADLAWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGHIPPDAQSDV 69
Query: 94 LIAFHRHVYD-------------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
L + R + EW + ++ V+ + ++ F EL Q AI
Sbjct: 70 LRTYRRAIDPDDETDIGQFREAVDEWLPAERDDDWTVVA-EAPTIAATFEELDPEAQAAI 128
Query: 141 EDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASGTEDLA 193
M GMA F+ + IDD +E YCYY AG VG ++ L ED+
Sbjct: 129 VPPVLEMVDGMAMFVDRHATEGGLRIDDREELEQYCYYAAGTVGNLITNLLT---REDIG 185
Query: 194 PD------SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
+ + GL LQ N+ +D +D E + ++ P E E + + E
Sbjct: 186 EERAERLRETAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLEAEGVDQERVVHPE 243
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
N + + + ++ A ++D Y+ L + +P ++A+GTL
Sbjct: 244 NRESSARVVDRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 295
>gi|448501393|ref|ZP_21612183.1| Squalene/phytoene synthase [Halorubrum coriense DSM 10284]
gi|445695185|gb|ELZ47295.1| Squalene/phytoene synthase [Halorubrum coriense DSM 10284]
Length = 353
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 28/289 (9%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E A+CY + VSR+FAL + L + + +C+ YL+ R DTVED IP + + +
Sbjct: 10 EADLAWCYEAVQGVSRTFALTVDVLEEPMSSQICVGYLLCRVADTVEDAGHIPPEAQSDV 69
Query: 94 LIAFHRHVYD-------------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
L + R + EW + ++ V+ + ++ F EL Q AI
Sbjct: 70 LRTYRRAIDPDDDTDIVAFRSAVDEWLPAERDDDWTVVA-EAPTIAATFEELDPEAQAAI 128
Query: 141 EDITKRMGAGMAKFICKEVES----IDDYDE---YCYYVAGLVGLGLSKLFYASGTEDLA 193
M GMA F+ + IDD DE YCYY AG VG ++ L +
Sbjct: 129 VPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGDIGEER 188
Query: 194 PDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 250
L + GL LQ N+ +D +D E + ++ P E + + + + EN +
Sbjct: 189 ATRLRETAEEFGLLLQLVNVSKDVYDDYTE--ENNVYLPAEWLEAEGVEQDRVVHPENRE 246
Query: 251 KAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
+ + + A ++D Y+ L + +P ++A+GTL
Sbjct: 247 SSARVVGRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTL 295
>gi|448365534|ref|ZP_21553914.1| squalene/phytoene synthase [Natrialba aegyptia DSM 13077]
gi|445655073|gb|ELZ07920.1| squalene/phytoene synthase [Natrialba aegyptia DSM 13077]
Length = 350
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 145/323 (44%), Gaps = 33/323 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M + Q+E + W CY +H VSR+F++ I +L + +C+ YL+ R DT+ED
Sbjct: 1 MTTGQSEYTTDADMEW--CYDAVHGVSRTFSITIDRLEEPMAKHICLGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHR-----------HVYDREWHFSCG----TKEYKVLMDQFHHVS 126
IP + +L + R D + G + +++V+ + V+
Sbjct: 59 AGHIPPAEQTVLLSTYDRLLDPNAAQSLESFMDDIEPWLPGPENRSNDWEVVANTPRVVA 118
Query: 127 TAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLG 179
T F L + ++ + + + + GMA F + ++++D+ +EYC+Y AG VG
Sbjct: 119 T-FETLDEEPREIMREPVRELVDGMAMFTDRYADEGGLRLQTLDELEEYCWYAAGTVGTL 177
Query: 180 LSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
++ L + D A + N S L LQ NI +D D +E + ++ P E ++
Sbjct: 178 ITGLVARGASPDRAAEMRDNARSFALLLQLVNIAKDVETDYHE--ENNVYLPAEWLAEEN 235
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIG 295
+E + EN + + A +++D +Y+ + + R AIP ++A+G
Sbjct: 236 VDVEAVTEVENQSGVTNVVERITGRAETYLDDAQRYLEVVPECHGNRLSAWAIPYLLAVG 295
Query: 296 TLALCYNNIE--VFRGVVKMRRG 316
T+ E V G VK+ R
Sbjct: 296 TMRELRERPEDVVEEGNVKIARA 318
>gi|403238444|ref|ZP_10917030.1| hypothetical protein B1040_22102 [Bacillus sp. 10403023]
Length = 270
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 132/297 (44%), Gaps = 50/297 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA----FH 98
ML + SR+F + I L +L+ +V YLV RA+D +ED + DVK +L+ F
Sbjct: 11 MLKETSRTFYIPITFLQKELKYSVASAYLVFRAIDEIEDHEELDNDVKSTMLMQISDLFK 70
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGMAKF 154
+ + E+ G K+ DQ V+ E K I D M GMAK+
Sbjct: 71 KPFDNEEYIRILGLKK-----DQMPEVTLRLQEWLQACPKDTLSIIMDAASEMALGMAKW 125
Query: 155 --ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ +++ +D DEY YYVAGLVG+ LS L+ G E L+ G LQ NI+R
Sbjct: 126 AKVNWNIQTREDLDEYTYYVAGLVGVLLSDLWEHYGDEK-TDRELAIGYGRGLQAVNILR 184
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY-EENSDKAVQCLNDMVTNALMHVEDCL 271
+ ED +E + F P + WS + E +Y EEN KA +
Sbjct: 185 NQKEDFDE--RGVSFVP-DGWS----RAELFEYAEENLAKADE----------------- 220
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRGLTAKVIDRTNN 327
YM +L +I FC +P LAL + ++ + G K+ R + +D
Sbjct: 221 -YMKSLSKKSILLFCRLP-------LALAHKTLKAMKEGREKITRAEVEQTVDEVQT 269
>gi|308274254|emb|CBX30853.1| hypothetical protein N47_E43650 [uncultured Desulfobacterium sp.]
Length = 365
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 140/319 (43%), Gaps = 51/319 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILI------- 95
+L +VSRSFAL I QL L I YL+ R +DT+ED+ + K
Sbjct: 17 ILQRVSRSFALTIPQLPPTLSRTTTIGYLLCRIVDTIEDEKDLSVAEKYSFFKEFVDVVD 76
Query: 96 ------AFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
AF + R + + K L++ V AFL L Q + K M A
Sbjct: 77 GYAKAEAFAERLLPRLGENTLSAE--KELVENCSLVIQAFLRLTSQEQAILSRCVKIMSA 134
Query: 150 GMAKFICKEVES------IDDYDEYCYYVAGLVGLGLSKLFYASGTE---------DLAP 194
GM +F +E++S I D YCY+VAG+VG L+ LF A E LAP
Sbjct: 135 GMLRF--QELKSFQGLKDIAHVDSYCYHVAGVVGEMLTDLFCAYSPEISKHRKKLYTLAP 192
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKY---VNKLEDLKYEENSD 250
S G LQ TNI++D +D K W P +++ K+ +++L + YE
Sbjct: 193 -----SFGQGLQMTNILKDLWDD----RKSGSCWLPGDVFQKHGYDLSRLSEYVYEPTFG 243
Query: 251 KAVQCLNDMVTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIEVFR 308
+ L++++ H+++ L Y + H I +FC MA+ TL N +
Sbjct: 244 RG---LSELIGITCAHLKNALTYTLMIPRHETGIRKFCLWAIGMAVCTLGNIKKNPDYQS 300
Query: 309 GV-VKMRRGLTAKVIDRTN 326
G VK+ + T +I TN
Sbjct: 301 GSDVKISQKNTKAIIVTTN 319
>gi|383318374|ref|YP_005379216.1| phytoene/squalene synthetase [Frateuria aurantia DSM 6220]
gi|379045478|gb|AFC87534.1| phytoene/squalene synthetase [Frateuria aurantia DSM 6220]
Length = 386
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 140/317 (44%), Gaps = 33/317 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
F ++L KVSR+FAL I QL L AV YL+ R DTVED+ ++ + K A
Sbjct: 18 FQDAILPKVSRTFALTIPQLPPSLCRAVGNAYLLCRIADTVEDEPALSAEDKCRYEEALI 77
Query: 99 RHVYDR----------EWHFSCGTKEY-KVLMDQFHHVSTAFLELGKGYQDAIEDITKRM 147
V R S T + + L Q V L Q AIE + M
Sbjct: 78 DAVTQRIDPAPLAAEVAARLSSATLDAERDLFAQLPTVLEVTRTLRPAQQAAIESCLRIM 137
Query: 148 GAGMAKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS----LSN 199
+GM F + + ++ + D YCY VAG VG L+ +F E A + LS
Sbjct: 138 ASGMHDFQTDAGVQGLATLQELDHYCYIVAGCVGDLLTDMFVDFDPEIAARGAAMRRLSV 197
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
S G LQ TNI++D ED + + PR++ ++ L L L+++
Sbjct: 198 SFGQGLQMTNILKDQWEDRT---RGACWLPRDLMRRHGVDLATLAPGRTPAGYKAALDEL 254
Query: 260 VTNALMHVEDCLKY--MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEV---FRGVVKMR 314
+ A+ H+ + L+Y + R I RFC + AIG L N+ F G +++
Sbjct: 255 IGVAISHLGNALEYTLLIPARHAGIRRFC----LWAIGMAVLTLQNLHASPDFSGGAQVK 310
Query: 315 RGLTAKVIDRTNNMTDV 331
+T K++ RT ++++
Sbjct: 311 --ITRKMVRRTIMLSNL 325
>gi|409720988|ref|ZP_11269217.1| Squalene/phytoene synthase [Halococcus hamelinensis 100A6]
gi|448723256|ref|ZP_21705779.1| Squalene/phytoene synthase [Halococcus hamelinensis 100A6]
gi|445787919|gb|EMA38646.1| Squalene/phytoene synthase [Halococcus hamelinensis 100A6]
Length = 349
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ L SR+FAL + L + VC+ YL+ R DTVED IP + + +L +
Sbjct: 15 WCHDALQGTSRTFALTVSALDEPMATEVCVSYLLCRVADTVEDAGHIPDEDQAELLTTYS 74
Query: 99 RHVYDRE-------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
R + + W + ++ V+ + V F L + A+ D +
Sbjct: 75 RALDPEDATDIEAFVAAVEPWLPADLDDDWTVVA-RADRVVRTFDGLDATAKAAVRDPIR 133
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
+ GMA F+ + +ES+D+ +EYC+YVAG VG ++ L D P+ +
Sbjct: 134 ELVDGMAMFVERHTETGGIRIESLDELEEYCWYVAGTVGTLVTNLL----ARDAPPERVR 189
Query: 199 N------SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
+ + GL LQ N+ +D +D +E + ++ P ++ E + +EN
Sbjct: 190 HLREHDRAFGLLLQLVNVAKDVTDDYHE--ENNVYLPAAWLREHGVDQERVCADENVTAV 247
Query: 253 VQCLNDMVTNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTL 297
+ + +A +++ Y+ A + A+P ++A+GTL
Sbjct: 248 ASVVRRVAEHATGYLDGARTYLEATPETGGNTLAAWAVPYLLAVGTL 294
>gi|389846615|ref|YP_006348854.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax mediterranei ATCC 33500]
gi|448615713|ref|ZP_21664476.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax mediterranei ATCC 33500]
gi|388243921|gb|AFK18867.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax mediterranei ATCC 33500]
gi|445751844|gb|EMA03275.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax mediterranei ATCC 33500]
Length = 358
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 33/341 (9%)
Query: 24 SRQAEKQIPP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD 82
SR A+ + P + +C+ + VSR+FAL + L + + +CI YL+ R DTVED
Sbjct: 2 SRHADARPPATDDDLDWCHDAVQGVSRTFALTVDVLDEPMASHICIGYLLCRIADTVEDS 61
Query: 83 TSIPTDVKVPILIAF------------HRHVYDREWHFSCGTKEYK--VLMDQFHHVSTA 128
+SI +D + +L + V + H ++ +++ V
Sbjct: 62 SSIASDEQARLLRLYDCALDPDDDTNVEEFVTAVQPHLPPEDEQSDDWMVVANTTRVFRT 121
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLS 181
F L ++A+ + + +GMA F+ + ++S ++ +EYCYY AG VG ++
Sbjct: 122 FEALPTDVREAVTPPVRELVSGMAMFVERYSKTGGLRIQSREELEEYCYYAAGTVGNLIT 181
Query: 182 KLFYASGTEDLAPDSL----SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYV 237
L G D SL + GL LQ NI +D +D + ++ P E
Sbjct: 182 NLV-TRGNVDSERRSLLYDTAEEFGLLLQLVNIAKDVHDDYTS--ENNVYLPAEWLEDVG 238
Query: 238 NKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIG 295
E++ E++D+ + T+A ++D Y+ LR+ AIP ++A+G
Sbjct: 239 VPQEEVINPEHNDQTASVVQRTATHAKSFLDDAQTYLETVPLREGNTLAAWAIPFLLAVG 298
Query: 296 TLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
TL N E V VK+ R V+ N+ LA
Sbjct: 299 TLRELVANPEHAVTGEGVKVSRQEVFAVVTAMNDAGSDSLA 339
>gi|448613023|ref|ZP_21662903.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax mucosum ATCC BAA-1512]
gi|445739920|gb|ELZ91426.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax mucosum ATCC BAA-1512]
Length = 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 144/345 (41%), Gaps = 41/345 (11%)
Query: 24 SRQAEKQIPP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD 82
SR A+ + P + +C+ + VSR+FAL + L + + +CI YL+ R DTVED
Sbjct: 2 SRHADARPPATDDDLDWCHDAVQGVSRTFALTVDVLDEPMASHICIGYLLCRIADTVEDS 61
Query: 83 TSIPTDVKVPILIAFHRHVYDREWH---------FSCGTKEYKVLMDQ----------FH 123
+SI D + +L +YDR F + + D+
Sbjct: 62 SSIAPDEQARLL-----RLYDRALDPDDDTSVDAFVAAVQSHLPPEDERSDDWMVVANTA 116
Query: 124 HVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLV 176
V F L ++A+ + + +GMA F+ + ++S ++ +EYCYY AG V
Sbjct: 117 RVFRTFESLPTDVREAVTPPVRELVSGMAMFVERYSKTGGLRIQSREELEEYCYYAAGTV 176
Query: 177 GLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIW 233
G ++ L + L + GL LQ NI +D +D + ++ P E
Sbjct: 177 GNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYTS--ENNVYLPAEWL 234
Query: 234 SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQI 291
ED+ E+ D+ + +A ++D Y+ LR+ AIP +
Sbjct: 235 EDVGVPQEDVVKPEHRDETASVVQRTADHAKSFLDDAQMYLETVPLREGNTLAAWAIPFL 294
Query: 292 MAIGTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
+A+GTL N E V VK+ R V+ N+ + LA
Sbjct: 295 LAVGTLRELVANPEHAVTGEGVKVSRQEVFAVVTAMNDASSDSLA 339
>gi|384208049|ref|YP_005593769.1| SQS PSY, Squalene/phytoene synthase-like protein [Brachyspira
intermedia PWS/A]
gi|343385699|gb|AEM21189.1| SQS PSY, Squalene/phytoene synthase-like protein [Brachyspira
intermedia PWS/A]
Length = 297
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 23/267 (8%)
Query: 71 LVLRALDTVEDDTSIPTDVKVPILIAF----HRHVYDREWHFS------CGTKEYKVLMD 120
++ R +DT+ED T D K ++ AF D +F + +VL++
Sbjct: 1 MLARIIDTIEDSTHSAED-KETLITAFINILKTENIDNLENFKNVVIAHSINENDRVLIE 59
Query: 121 QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL 180
V +F + ++ + MG GM + + + +D D+YCYYVAG VGL L
Sbjct: 60 NIDIVLKSFFTFKQEIKNISISYLREMGYGMVYYQDHTISTFEDLDDYCYYVAGTVGLYL 119
Query: 181 SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY--VN 238
++L +L + + S+G FLQK NII+D D E R+FWP ++
Sbjct: 120 TELSKILDNMELDREK-AKSLGRFLQKVNIIKDAKLDYEE---KRVFWPISLFENENPAP 175
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGT 296
ED Y DK+++ L MV +A+ + ++Y+ A+ A RFC + +M +
Sbjct: 176 YFEDGAY---MDKSMEILVKMVESAMAEFRNSIEYIMAIDKKASGYRRFCLVAVLMGYES 232
Query: 297 LALCYNNIEVFRG-VVKMRRGLTAKVI 322
+ L +N +F G VK+ R T +++
Sbjct: 233 IKLMKSNYNIFMGETVKIPRKNTLEIV 259
>gi|94314536|ref|YP_587745.1| squalene/phytoene synthase [Cupriavidus metallidurans CH34]
gi|93358388|gb|ABF12476.1| Squalene/phytoene synthase [Cupriavidus metallidurans CH34]
Length = 353
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 124/278 (44%), Gaps = 31/278 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P+ AF +L VSRSF L ++ L +R+ V + YL+ RA DT+ D + IP ++
Sbjct: 2 PNPNRAFLLGPLLKGVSRSFYLTLRILPEGMRDPVGLAYLLARAADTIADTSLIPPVQRL 61
Query: 92 PILIAFHRHVYDREWHFSCGTK------------EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L+A +HV + S + + KVL++ +L A
Sbjct: 62 DLLLALRQHVNGTQNDGSLAQRLSAEVASQQTQSDEKVLLESIGPALGVLSQLDASDCTA 121
Query: 140 IEDITKRMGAGMA----------KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA--S 187
+ I + GM + ++D+ D Y Y VAG VG + + YA
Sbjct: 122 VRGIVDTLTEGMEFDLRTFPDERSGQVAALRTMDELDRYTYLVAGCVGEFWTTMTYAHQP 181
Query: 188 GTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
GT AP+++ G LQ N++RD +D+ I +C + P EI ++ DL
Sbjct: 182 GTLTAAPETMLRRGVRFGKALQMVNVLRDCGKDLR-IGRC--YLPTEILERHGMTPRDLM 238
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
N+ +A L++++ +L H + + Y A+ AI
Sbjct: 239 DPANALRARPILDELLHVSLAHFREAMAYTFAIPRTAI 276
>gi|257052017|ref|YP_003129850.1| Squalene/phytoene synthase [Halorhabdus utahensis DSM 12940]
gi|256690780|gb|ACV11117.1| Squalene/phytoene synthase [Halorhabdus utahensis DSM 12940]
Length = 348
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 31/292 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
PP+ W CY + VSR+FAL ++ L + + + + YL+ R DT+ED IP D +V
Sbjct: 7 PPDIEW--CYEAVQGVSRTFALTVEALDEPMASQIGLGYLLCRVADTIEDAGHIPPDEQV 64
Query: 92 PILIAFH--------------RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQ 137
+L + R D +++++V+ + V F + +
Sbjct: 65 SLLATYDAALDPDADGTMLDFRSAVDPWLPEPERSEDWRVVA-RAPTVWATFADQPADAR 123
Query: 138 DAIEDITKRMGAGMAKFICKEVES----IDDY---DEYCYYVAGLVGLGLSKLFYASGTE 190
AI + M GMA F+ + + DY DEYC+Y AG VG+ ++ L G
Sbjct: 124 AAIVPPVREMVDGMADFLSAHAATGGLRLADYAELDEYCHYAAGTVGMLITNLLTRDGVA 183
Query: 191 DLAPDSLSNSMGLF---LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
++L + G F LQ N+ +D D +E + ++ P + + E + +
Sbjct: 184 QGRSETLYETAGSFARLLQLVNVAKDVHADFHE--ENNVYLPATWLAAENVEQEHVLADR 241
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL 297
N D + ++ T A ++D Y+ A L ++P ++++GTL
Sbjct: 242 NRDAVGRVVDRTATRARTFLDDAQSYLEAMPLSHGNTLAAWSVPYLLSVGTL 293
>gi|121999059|ref|YP_001003846.1| squalene/phytoene synthase [Halorhodospira halophila SL1]
gi|121590464|gb|ABM63044.1| farnesyl-diphosphate farnesyltransferase [Halorhodospira halophila
SL1]
Length = 359
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 141/328 (42%), Gaps = 42/328 (12%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
A+ + L VSR+FAL I QL LR+ V YL+ R DT+ED ++ +VK +++
Sbjct: 21 AYQEAALPGVSRTFALTIPQLPEVLRDTVTNAYLLCRVADTIEDHSAADVEVKHDLMLGL 80
Query: 98 HRHVYDR--------------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI 143
+ +W ++ V + + V+ E +Q +
Sbjct: 81 KEALNGARDPQQLAGQIEAVLDWDTPPAERDLVVSLPRVIAVTGGLPE---AHQGPVIRC 137
Query: 144 TKRMGAGMAKF--ICKEVESID--DYDEYCYYVAGLVGLGLSKLFYAS-----GTEDLAP 194
MG GMA+F + V D ++EYCYYVAG+VG L+ LF G D
Sbjct: 138 VSIMGEGMARFQRLRSPVGLADRAQFEEYCYYVAGVVGEMLTDLFILEVEGFDGDRDEMM 197
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL-EDLKYEENSDKAV 253
D L GL LQ TN+I+D D E C + PREI+++ L D + E+
Sbjct: 198 D-LGRRFGLGLQATNVIKDVWAD-RERGVC--WLPREIFTESGCSLGPDADWSEDPGFH- 252
Query: 254 QCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCY--------NN 303
+ + M+ + H+E Y+ + I RFCA M++ TL +
Sbjct: 253 RGIGRMIEIGVEHMEAARAYILRIPPTQPGIRRFCAWAATMSLATLRQIRRHPGFKSGDE 312
Query: 304 IEVFRGVVKMRRGLTAKVIDRTNNMTDV 331
+++ R V+ GLT +R M V
Sbjct: 313 VKISRRQVRRLAGLTNYAAERDWAMRTV 340
>gi|448590698|ref|ZP_21650463.1| farnesyl-diphosphate farnesyltransferase [Haloferax elongans ATCC
BAA-1513]
gi|445734194|gb|ELZ85753.1| farnesyl-diphosphate farnesyltransferase [Haloferax elongans ATCC
BAA-1513]
Length = 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 136/311 (43%), Gaps = 33/311 (10%)
Query: 24 SRQAEKQIPP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD 82
SR A+ + P + +C+ + VSR+FAL + L + + +CI YL+ R DT+ED
Sbjct: 2 SRHADARPPATDDDLNWCHDAVQGVSRTFALTVDVLDEPMSSYICIGYLLCRIPDTIEDS 61
Query: 83 TSIPTDVKVPIL------------IAFHRHVYDREWHFSCG---TKEYKVLMDQFHHVST 127
+SI D + +L A V E H + ++ V+ + + T
Sbjct: 62 SSIAPDEQAHLLRLYDSALDPDDDTAIDEFVVAAEPHLPPAADRSDDWDVVANAPRVLRT 121
Query: 128 AFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGL 180
F L ++A+ + + +GMA F+ + ++S ++ +EYCYY AG VG +
Sbjct: 122 -FEALPVDVREAVTPPVRELVSGMAMFVERYSHTGGLRIQSREELEEYCYYAAGTVGNLI 180
Query: 181 SKLFYASGTEDLAPDSL----SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
+ L G D SL + GL LQ NI +D +D + + ++ P E
Sbjct: 181 TNLV-TRGNIDRERHSLLYDTAEEFGLLLQLVNIAKDVHDDYDS--ENNVYLPAEWLEDA 237
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAI 294
E++ ++ + + T+A ++D Y+ LRD IP ++A+
Sbjct: 238 GVPQEEVTAPQHEAQTASVVRRTATHAKSFLDDAQTYLETVPLRDGNTLAAWGIPFLLAV 297
Query: 295 GTLALCYNNIE 305
GTL N E
Sbjct: 298 GTLRELVANPE 308
>gi|325982949|ref|YP_004295351.1| squalene/phytoene synthase [Nitrosomonas sp. AL212]
gi|325532468|gb|ADZ27189.1| Squalene/phytoene synthase [Nitrosomonas sp. AL212]
Length = 352
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 146/330 (44%), Gaps = 53/330 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL LR + YL+ R DT+EDD ++ I R +
Sbjct: 16 ILQGVSRTFALTIPQLPEPLRRIIGNAYLLCRITDTIEDDNALT--------IEQTRQLS 67
Query: 103 DREWHFSCGT--------KEYKVLMDQF----HHV---STAFLELGKGY----QDAIEDI 143
D CG K + +L DQ H + + A + + + + A+E
Sbjct: 68 DMFAEVVCGNASAEEFSLKLHPLLSDQTIPAEHDLIKNTPAVIRITHSFNPVQRKALERC 127
Query: 144 TKRMGAGMAKFICKEVESIDDY------DEYCYYVAGLVGLGLSKLF--YASGTEDLAPD 195
+ M GMA + +E ES++ ++YCYYVAG+VG L++LF Y+ P
Sbjct: 128 VRIMAQGMADY--QETESLEGLKDLSAMNQYCYYVAGVVGEMLTELFCDYSPEINAHKPV 185
Query: 196 --SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKYVNKLEDLKYEENSDKA 252
L+ S G LQ TNI++D +D K + W P++I+ K L L+ N K
Sbjct: 186 LMKLAVSFGQGLQMTNILKDIWDD----RKRGVCWLPQDIFLKNGFNLSKLQPGMNDTKF 241
Query: 253 VQCLNDMVTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIEVFRGV 310
L +++ A H+ + L Y + + H I RFC + AIG L N I R
Sbjct: 242 QAGLAELLGVAKGHLLNALIYTNLIPSHEKGIRRFC----LWAIGMAILTLNKINRHR-- 295
Query: 311 VKMRRGLTAKVIDRTNNMTDVYLAFYDFSN 340
G K+ R+ +T + + + N
Sbjct: 296 -NFSEGAQVKISRRSVKVTILTTSLFASHN 324
>gi|448437797|ref|ZP_21587707.1| Squalene/phytoene synthase [Halorubrum tebenquichense DSM 14210]
gi|445679947|gb|ELZ32399.1| Squalene/phytoene synthase [Halorubrum tebenquichense DSM 14210]
Length = 355
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 29/295 (9%)
Query: 29 KQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTD 88
+ P EP A+C+ + VSR+FAL I L L + +C+ YL+ R DT+ED T I +
Sbjct: 5 QSAPSEPPLAYCHDAVQDVSRTFALTIDALEPPLADQICVGYLLCRIPDTIEDSTHISAE 64
Query: 89 VKVPILIAFHRHVYDREWH-----FSCGTKEYKV---------LMDQFHHVSTAFLELGK 134
+ +L + + D E F+ ++Y L+ V AF + +
Sbjct: 65 TQQRLLRTYSASL-DPESPASSEVFTRQARQYMPNRSSVADWELVGNTETVVAAFEQFSQ 123
Query: 135 GYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYAS 187
Q+A+ + M GM +F + +++ + YC+YVAG VG ++ L
Sbjct: 124 ETQEAMRPPIREMITGMIRFTGRYADESGIRIQTHTELRSYCHYVAGTVGALITNLLAKQ 183
Query: 188 GTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
++L + G LQ NI +D ED + + ++ P E + + +
Sbjct: 184 PLTTSREEALRRNAEHFGRLLQLVNIAKDVHEDY--VTENNVYLPSEWLAAEGIPQDQII 241
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMS--ALRDHAIFRFCAIPQIMAIGTL 297
+ + ++A L+ ++ A H++ Y+ L + A+P ++A+GTL
Sbjct: 242 HTDYREEATSVLSRVLELANQHLDAAQSYIEQMPLGNGNTVVAWAVPYLLAVGTL 296
>gi|389818156|ref|ZP_10208597.1| squalene/phytoene synthase [Planococcus antarcticus DSM 14505]
gi|388464088|gb|EIM06424.1| squalene/phytoene synthase [Planococcus antarcticus DSM 14505]
Length = 276
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
ML + SR+F + I L L+ V YL +RA+D +ED + +K+ +L + + +
Sbjct: 14 MLKETSRTFFIPISFLEPTLKKTVGSAYLCMRAIDEIEDHPELEDQIKIKLLSSIQKMLA 73
Query: 102 --YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE- 158
+D ++ T + L ++ + + + + T M GM+K++ K+
Sbjct: 74 TDFDEAYYLELVTPYEQFLPPVTMRLADWISVCPEDIKGKVMESTAIMAGGMSKWVEKDW 133
Query: 159 -VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 217
+++ +D DEY YYVAGLVG LS ++Y + PD + + G LQ N++R+Y ED
Sbjct: 134 VIKTKEDLDEYTYYVAGLVGTMLSDIWYWYDGTETDPDH-AIAFGRGLQAVNMLRNYDED 192
Query: 218 INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
+ F P E W++ DM A ++ Y+ +
Sbjct: 193 FE---RGVTFVP-EGWTR---------------------EDMFNYAKDNLAKADLYVKPI 227
Query: 278 RDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRGLTAKVIDR 324
++ I FC +P LAL +N ++ + G KM R ++++
Sbjct: 228 KNKRILMFCKVP-------LALAHNTLKALKSGKEKMSRQEVEGIVEQ 268
>gi|403071113|ref|ZP_10912445.1| hypothetical protein ONdio_16156 [Oceanobacillus sp. Ndiop]
Length = 272
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L SR+F + I+ L + L+ V YL +RA+D +ED + DVK +L + +
Sbjct: 14 VLKLTSRTFYIPIKLLNSTLKKTVGSAYLCMRAIDEIEDHEQLDGDVKHRLLTETSKLLK 73
Query: 102 --YDREWHFSCGTKEYKVLMDQFHHVSTAFLEL-GKGYQDAIEDITKRMGAGMAKFICKE 158
+D E + + Y+ L+ + +L G D ++ T M GMAK++ K
Sbjct: 74 SDFD-EAAYRELIQPYESLLPEVTVRLGDWLRFCPAGIVDEVKASTSEMAEGMAKWVTKG 132
Query: 159 --VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
VE+ +D DEY YYVAGLVG+ LS ++ + GTE L+ G LQ NI+R+
Sbjct: 133 WIVETKEDLDEYTYYVAGLVGVMLSDIWKWYDGTE--TDRELAIGYGRGLQAVNILRNKD 190
Query: 216 EDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMS 275
ED + F+P + W++ +DM A ++ +YM
Sbjct: 191 EDAE---RGVRFFP-DGWTR---------------------DDMFAYAEGNLSRADQYMQ 225
Query: 276 ALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
+ I FC IP +A TL N E KM R +D N
Sbjct: 226 QINTRNIILFCKIPLALAKRTLKTLKNGKE------KMTRAEVESTVDEIIN 271
>gi|292655297|ref|YP_003535194.1| farnesyl-diphosphate farnesyltransferase [Haloferax volcanii DS2]
gi|291371503|gb|ADE03730.1| farnesyl-diphosphate farnesyltransferase [Haloferax volcanii DS2]
Length = 358
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 146/340 (42%), Gaps = 31/340 (9%)
Query: 24 SRQAEKQIPP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD 82
SR A+ + P + +C+ + VSR+FAL + L + + +CI YL+ R DTVED
Sbjct: 2 SRHADARPPATDDDLDWCHDAVQGVSRTFALTVDVLDEPMASHICIGYLLCRIADTVEDS 61
Query: 83 TSIPTDVKVPILIAFHRH------------VYDREWHFSCGTKEYK--VLMDQFHHVSTA 128
+SI D + +L + R V + H ++ +++ V
Sbjct: 62 SSIAPDEQAHLLRLYDRALDSDDDTTVDEFVAAVQPHLPPEGEQSDDWMVVANTARVFRT 121
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLS 181
F L + ++A+ + + +GMA F+ + ++S ++ +EYCYY AG VG ++
Sbjct: 122 FEALPEDVREAVTPPVRELVSGMAMFVERYSQTGGLRIQSREELEEYCYYAAGTVGNLIT 181
Query: 182 KLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN 238
L + L + GL LQ NI +D +D + ++ P +
Sbjct: 182 NLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYTS--ENNVYLPADWLDDAGV 239
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGT 296
E++ E++D+ + +A ++D Y+ LR+ AIP ++A+GT
Sbjct: 240 PQEEVVDPEHNDRTASVVARTADHAKSFLDDAQTYLETVPLREGNTLAAWAIPFLLAVGT 299
Query: 297 LALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
L N E V VK+ R V+ N + LA
Sbjct: 300 LRELVANPEHAVTGEGVKISRQEVFAVVSEMNGASSESLA 339
>gi|158336802|ref|YP_001517976.1| squalene and phytoene synthase [Acaryochloris marina MBIC11017]
gi|158307043|gb|ABW28660.1| squalene and phytoene synthase [Acaryochloris marina MBIC11017]
Length = 359
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 24/306 (7%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF- 97
FC +L +VSR+FAL I+ L +L AV YL+ R DT+EDD + K+ +L F
Sbjct: 18 FCQEILPQVSRTFALSIRFLPGNLGRAVLCGYLLARIADTIEDDPVATVESKIRLLDKFL 77
Query: 98 -------HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
++ + G + L++ H V F L Q ++ M G
Sbjct: 78 ACFDDPAQADIFPQVVGTLEGETAHLHLVENTHLVFALFRSLPAKSQQTLQHWITEMVQG 137
Query: 151 MAKFI-----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAP-DSLSNSMGL 203
M KF+ ++++++Y EYCYYVAG VG L+ L++ S + D A +L +
Sbjct: 138 MQKFVKLHAQGIRIKTLEEYQEYCYYVAGTVGYLLTDLWFEHSPSVDFATYHTLRQTCAA 197
Query: 204 F---LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
F LQ NI++D D + ++ P++ + + E L E + + +V
Sbjct: 198 FGEGLQTVNILKDIAWDAEH--ENSIYVPQDALESHGSSHEKLLDPEFLTQNHAAITSLV 255
Query: 261 TNALMHVEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFR--GVVKMRRG 316
A ++ +Y+ + AI R FC +P + A TL + + + G +K+ R
Sbjct: 256 ELAWSDLDKAAQYLMEVPRSAIPIRLFCILPLVFAYATLRDITGSTAMLKSGGNIKISRA 315
Query: 317 LTAKVI 322
+I
Sbjct: 316 EVKSLI 321
>gi|114330424|ref|YP_746646.1| squalene/phytoene synthase [Nitrosomonas eutropha C91]
gi|114307438|gb|ABI58681.1| farnesyl-diphosphate farnesyltransferase [Nitrosomonas eutropha
C91]
Length = 346
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 52/316 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL LR + YL+ R +DTVEDD+++ + + F V
Sbjct: 16 ILQGVSRTFALTIPQLPPALRAVIGNAYLLCRIVDTVEDDSALTLEQTRELAGMFTEVV- 74
Query: 103 DREWHFSCGTKEYKVLMDQFHHV---------------STAFLELGKGY----QDAIEDI 143
G+ E ++ + + + A + + + + A+E
Sbjct: 75 -------SGSIEAEIFAQALYPLLSEHTIPAEHDLIKNTPAVIRMTHSFNSVQRQALERC 127
Query: 144 TKRMGAGMAKFICKE----VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---- 195
+ MG GMA + KE +E++ + D YCY+VAG+VG L++LF D +P+
Sbjct: 128 IRIMGQGMAAYQEKESLAGLENLAEMDLYCYHVAGVVGEMLTELFC-----DYSPEINQH 182
Query: 196 -----SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 250
L+ S G LQ TNI++D ED + + PR+I+ + L++L+ +
Sbjct: 183 KSTLMKLAVSFGQGLQMTNILKDIWEDRK---RGACWLPRDIFLEEGFDLDNLQPGRCAQ 239
Query: 251 KAVQCLNDMVTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIEVFR 308
L ++ A H+ + + Y + H I RFC MA+ TL N
Sbjct: 240 GFHDGLGTLIGIAKSHLHNAMIYTRLIPSHETGIRRFCLWAIGMAVLTLNKINNKRNFTA 299
Query: 309 GV-VKM-RRGLTAKVI 322
GV VK+ RR + A V+
Sbjct: 300 GVQVKISRRSVKATVL 315
>gi|359458148|ref|ZP_09246711.1| squalene and phytoene synthase [Acaryochloris sp. CCMEE 5410]
Length = 359
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 24/306 (7%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI----L 94
FC +L +VSR+FAL I+ L +L AV YL+ R DT+EDD + K+ + L
Sbjct: 18 FCQEILPQVSRTFALSIRFLPGNLGRAVLCGYLLARIADTIEDDPVATVESKIRLLDKFL 77
Query: 95 IAFHRHVYDREWHFSCGTKEYKV----LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
+ F + GT E + L++ H V F L Q ++ M G
Sbjct: 78 VCFDEPAQADMFPQIVGTLEGEAAHLHLVENTHLVFALFRSLPAKSQQTLQHWITEMVQG 137
Query: 151 MAKFI-----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAP-DSLSNSMGL 203
M KF+ ++++++Y EYCYYVAG VG L+ L++ S + D A +L +
Sbjct: 138 MQKFVKLHAQGIRIKTLEEYQEYCYYVAGTVGYLLTDLWFEHSPSVDFATYHTLRQTCAA 197
Query: 204 F---LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
F LQ NI++D D + ++ P++ + + E L E + + +V
Sbjct: 198 FGEGLQTVNILKDIAWDAEH--ENSIYVPQDALETHGSSHEKLLDPEFLAQNHAAIKSLV 255
Query: 261 TNALMHVEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFR--GVVKMRRG 316
A ++ +Y+ + AI R FC +P + A TL + + + G +K+ R
Sbjct: 256 ELAWSDLDKAAQYLMEVPRSAIPIRLFCILPLVFAYATLRDITGSTAMLKSGGNIKISRA 315
Query: 317 LTAKVI 322
+I
Sbjct: 316 EVKSLI 321
>gi|433638231|ref|YP_007283991.1| phytoene/squalene synthetase [Halovivax ruber XH-70]
gi|433290035|gb|AGB15858.1| phytoene/squalene synthetase [Halovivax ruber XH-70]
Length = 350
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 49/323 (15%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ +H VSR+F++ I +L + +C+ YL+ R DT+ED +P + +L +
Sbjct: 16 WCFDAVHGVSRTFSITIDRLEEPMARQICVGYLLCRIADTIEDAGHVPPAAQSDLLTEYD 75
Query: 99 RHVYDREWHFSCGTKEYKVLMDQF------------------------HHVSTAFLELGK 134
R T EY V DQF V AF L
Sbjct: 76 R--------LLDPTDEYTV--DQFVDAVSPWLPEPDERSADWTVVAETSRVLRAFETLDD 125
Query: 135 GYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYAS 187
++ + D + + GMA F + +++ID+ +EYC+Y AG VG +++L
Sbjct: 126 EPRELMRDPIRELVGGMAMFTERYADEGGLRLQTIDELEEYCWYAAGTVGTLITELLVRD 185
Query: 188 GTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY 245
+ A + N S L LQ NI +D D +E + ++ P E ++ + +
Sbjct: 186 IPSERAAELRDNARSFALLLQLVNIAKDVQSDYHE--ENNVYLPAEWLAEEAVASDAVTD 243
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNN 303
+N + +V A +++ +Y+ + +H AIP ++A+GTL
Sbjct: 244 TDNHQGVTTVVRRVVDRAEHYLDGAHRYLEIVPEHHGNTLSAWAIPYLLAVGTLRELRQR 303
Query: 304 IE--VFRGVVKMRRGLTAKVIDR 324
E V G VK+ R VI R
Sbjct: 304 SEDVVRTGDVKLPREEVYAVIQR 326
>gi|448575254|ref|ZP_21641702.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax larsenii JCM 13917]
gi|445731326|gb|ELZ82911.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloferax larsenii JCM 13917]
Length = 358
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 147/342 (42%), Gaps = 35/342 (10%)
Query: 24 SRQAEKQIPP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD 82
SR A+ + P + +C+ + VSR+FAL + L + + +CI YL+ R DT+ED
Sbjct: 2 SRHADARPPATDDDLNWCHDAVQGVSRTFALTVDVLDEPMSSYICIGYLLCRIPDTIEDS 61
Query: 83 TSIPTDVKVPIL------------IAFHRHVYDREWHFSCG---TKEYKVLMDQFHHVST 127
+SI D + +L + V E H + ++ V+ + + T
Sbjct: 62 SSIAPDEQAHLLRLYDSALDPDDDTSIDEFVVAVEPHLPPAADRSDDWDVVANAPRVLRT 121
Query: 128 AFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGL 180
F L ++A+ + + +GMA F+ + ++S ++ +EYCYY AG VG +
Sbjct: 122 -FEALPVDVREAVTPPVRELVSGMAMFVERYSHTGGLRIQSREELEEYCYYAAGTVGNLI 180
Query: 181 SKLFYASGTEDLAPDSL----SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
+ L G D SL + GL LQ NI +D +D + + ++ P E
Sbjct: 181 TNLV-TRGNIDRERHSLLYDTAEEFGLLLQLVNIAKDVHDDYDS--ENNVYLPAEWLEDA 237
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAI 294
E++ ++ + + T+A ++D Y+ LRD IP ++A+
Sbjct: 238 GVPQEEVTAPQHEAQTASVVRRTATHAKSFLDDAQTYLETVPLRDGNTLAAWGIPFLLAV 297
Query: 295 GTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
GTL N E V VK+ R V+ N + LA
Sbjct: 298 GTLRELVANPERAVTGEGVKISRQEVFAVVAALNGTSADTLA 339
>gi|377811587|ref|YP_005044027.1| farnesyl-diphosphate farnesyltransferase [Burkholderia sp. YI23]
gi|357940948|gb|AET94504.1| farnesyl-diphosphate farnesyltransferase [Burkholderia sp. YI23]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 33/290 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++ L++ R V
Sbjct: 13 LLKSVSRSFYLTLRILPAAMRDPIGLAYLLARAADTIADTSLISPQRRLEWLLSLRRQVN 72
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLE-----------LGKGYQDAIEDITKRMGAGM 151
+ + +V Q A LE L + Q A+ DI + GM
Sbjct: 73 GAPDDGALASIAGEVAGQQTQPDERALLERLAEALAILPQLSRDDQAAVRDIVTTLTTGM 132
Query: 152 AKFICK-----------EVESIDDYDEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDS-- 196
+F + + + D Y Y VAG VG +++ YA GT AP++
Sbjct: 133 -EFDLRTFPDETSGHIVALREFGELDRYTYLVAGCVGEFWTRMTYAHMPGTLKAAPETML 191
Query: 197 -LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
L G LQ TN++RD D+ I +C + P + +++ DL E+S +A
Sbjct: 192 ALGVRFGKALQMTNVLRDCARDLR-IGRC--YLPETMLARHGLAPRDLLQPESSARARPV 248
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
L D++ ++ +D + Y A+ A+ R C P ++ + TL L N
Sbjct: 249 LFDLLRTSIALFQDAVDYTLAIPATAVRLRLACLWPIMIGLDTLVLLARN 298
>gi|448420602|ref|ZP_21581349.1| farnesyl-diphosphate farnesyltransferase [Halosarcina pallida JCM
14848]
gi|445673753|gb|ELZ26313.1| farnesyl-diphosphate farnesyltransferase [Halosarcina pallida JCM
14848]
Length = 356
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 46/325 (14%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL---- 94
+C+ + VSR+FAL + L + + +C+ YL+ R DT+ED + IP V+ +L
Sbjct: 17 WCHEAVEGVSRTFALTVDVLDEPMSSYICVGYLLCRIPDTIEDASHIPPSVQTELLRTYD 76
Query: 95 --------IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
A V E H E ++ + V F L ++A+ +
Sbjct: 77 AVLDPDDDTAVEAFVDAVEPHLPDELTEDWRVVREAPRVLHTFESLPADVREAVTPPARE 136
Query: 147 MGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD---- 195
+ GMA F+ + ++S ++ +EYCYY AG VG ++ L D++P+
Sbjct: 137 LVQGMALFVERYDDTGGLRIQSREELEEYCYYAAGTVGNLITNLVTRG---DVSPERRRR 193
Query: 196 --SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
+ GL LQ NI +D +D + ++ P E E++ E+ +A
Sbjct: 194 LYDTAEEFGLLLQLVNISKDVYDDYTS--ENNVYLPAEWLDAEGVPQEEVLDPEHEAEAA 251
Query: 254 QCLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTL---------ALCYN 302
+ +A ++D Y+ + L D A+P ++++GTL AL +
Sbjct: 252 SVVRRTAEHASSFLDDAQTYLESVPLTDGNTLAAWAVPFLLSVGTLRELLSRPEDALSKS 311
Query: 303 NI-----EVFRGVVKMRRGLTAKVI 322
+ EVF V +M G + I
Sbjct: 312 GVKVSRQEVFAVVSRMSDGAESDAI 336
>gi|381152697|ref|ZP_09864566.1| phytoene/squalene synthetase [Methylomicrobium album BG8]
gi|380884669|gb|EIC30546.1| phytoene/squalene synthetase [Methylomicrobium album BG8]
Length = 366
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 25/303 (8%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P AF +L VSR+FAL I QL L V YL+ R +DT+ED+ S+ + K
Sbjct: 18 PDDAFQTELLKGVSRTFALTIPQLPQPLYGPVANAYLLCRIVDTIEDEVSLTPEQKSYFC 77
Query: 95 IAFHRHVYDREWHFSCGTKEYKVLMDQ-------FHHVSTAFLELGKGYQ----DAIEDI 143
F V + +L D+ HV +E+ DA+ +
Sbjct: 78 SDFIDVVKTGLNSEPFAAELAPLLSDKTLPAEHTLIHVMPRVIEITHSLDPEQIDALAEC 137
Query: 144 TKRMGAGMAKFICKEVE----SIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDS-- 196
M GM+ F + ++ ++ D D+YCYYVAG VG L+KLF + S T D
Sbjct: 138 VATMAEGMSAFQSQNLQHGLPTLADLDKYCYYVAGCVGEMLAKLFCHYSPTIAEHKDELL 197
Query: 197 -LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
LS S G LQ TNI++D +D + + P++I+ + L+ + N +
Sbjct: 198 RLSVSFGQGLQMTNILKDIWDDAE---RGVCWLPQDIFRETGFDLKKQTPDANDPNYKKG 254
Query: 256 LNDMVTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTLALCYNNIEVFRG-VVK 312
L ++ A H+ + L+Y L H + FC MA+ TL +++ R VK
Sbjct: 255 LTHLIGIAHGHLRNALRYTQLLPAHETGLRNFCLWALGMAVLTLKKIKRHLDFNRSEQVK 314
Query: 313 MRR 315
+ R
Sbjct: 315 ISR 317
>gi|53804819|ref|YP_113313.1| squalene synthase [Methylococcus capsulatus str. Bath]
gi|53758580|gb|AAU92871.1| squalene synthase [Methylococcus capsulatus str. Bath]
Length = 362
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 24/280 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
F L VSR+FAL I +L L V YL+ R +DT+ED+ ++ + K F
Sbjct: 20 FQAHFLDGVSRTFALTIPRLPEGLARPVSNGYLLCRIVDTIEDEVALTSTQKRRYCEHFA 79
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAF-------LELGKGY----QDAIEDITKRM 147
R V + + +L DQ + + G+ Q+A+ + M
Sbjct: 80 RVVAGTAPAAPLADELFPLLSDQTLAAERELIAAIPRVISITHGFAAPQQEALAECVATM 139
Query: 148 GAGMAKFICKE----VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS----LSN 199
GMA+F K+ +E + +YCYYVAG+VG L++LF E A S L+
Sbjct: 140 SRGMAEFQDKDLRHGLEDLRQMGDYCYYVAGVVGEMLTRLFCHYSPEIAAHRSRLMELAV 199
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
S G LQ TNI++D +D + + P+E++++ L +L+ + V+ +
Sbjct: 200 SFGQGLQMTNILKDLWDDHA---RGVCWLPQEVFTECGFSLTELRPHHANPDFVRGFERL 256
Query: 260 VTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTL 297
+ A H+ + L+Y + H I FC MA+ TL
Sbjct: 257 IGVAHAHLRNALEYTLLIPRHETGIREFCLWALGMAVLTL 296
>gi|354611653|ref|ZP_09029609.1| Squalene/phytoene synthase [Halobacterium sp. DL1]
gi|353196473|gb|EHB61975.1| Squalene/phytoene synthase [Halobacterium sp. DL1]
Length = 347
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 49/310 (15%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M Q+ + E W C+ + VSR+FAL + L + + +C+ YL+ R DT+ED
Sbjct: 1 MVGGQSPQSAATEREW--CHETVQDVSRTFALTVDALEEPMASRICVGYLLCRVADTIED 58
Query: 82 DTSIPTDVKVPILIAFHR----------------------HVYDREWHFSCGTKEYKVLM 119
TS+ + +L + R D +W ++
Sbjct: 59 STSMSPARQASLLRTYDRVLALDDDTTVEMFREDVADVLPEELDADW----------TVV 108
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYV 172
+ V AF L QDAI + M GMA F+ + ++++ + +EYC+YV
Sbjct: 109 AEAPRVVRAFESLDTDAQDAIRPTVREMTTGMAGFVERYADEGGLRIQTLSELEEYCWYV 168
Query: 173 AGLVGLGLSKLFYASGTEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPR 230
AG VG +++L D A + S L LQ N+ +D D E + ++ P
Sbjct: 169 AGTVGELVTELLADDAAPDDAETMREHARSFALLLQLVNVAKDVQPDYYE--ENNVYLPA 226
Query: 231 EIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL---RDHAIFRFCA 287
E ++ ED+ N+ + + + A + + +++ A+ R + + + +
Sbjct: 227 EWLAEQELDPEDVAEPANAGRVGMVVQRVTERARGYADGAHRWLEAMPTTRGNTLAAW-S 285
Query: 288 IPQIMAIGTL 297
+P ++A+GT+
Sbjct: 286 VPFLLAVGTM 295
>gi|445063306|ref|ZP_21375528.1| squalene/phytoene synthase-like protein [Brachyspira hampsonii
30599]
gi|444505305|gb|ELV05845.1| squalene/phytoene synthase-like protein [Brachyspira hampsonii
30599]
Length = 220
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 145 KRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLF 204
+ MG GM + + + +D D+YCYYVAG VGL L++L +L + + S+G F
Sbjct: 7 REMGYGMIYYQDHVISTFEDLDDYCYYVAGTVGLYLTELTKILDNLELDREK-AKSLGRF 65
Query: 205 LQKTNIIRDYLEDINEIPKCRMFWPREIWSKY--VNKLEDLKYEENSDKAVQCLNDMVTN 262
LQK NII+D D E R+FWP ++ ED Y DK+++ L M+ +
Sbjct: 66 LQKVNIIKDAKLDYGE---KRVFWPLSLFENENPAPYFEDGAY---MDKSMEILVKMIES 119
Query: 263 ALMHVEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFRG-VVKMRRGLTA 319
A+ + ++Y+ + AI +R FC + +M T+ L +N +F G VK+ R T
Sbjct: 120 AMSEFRNSIEYIMTIEKKAIGYRHFCLVATLMGYETIKLMKSNYNIFMGETVKIPRKNTL 179
Query: 320 KV 321
++
Sbjct: 180 EI 181
>gi|37523627|ref|NP_927004.1| farnesyl-diphosphate farnesyltransferase [Gloeobacter violaceus PCC
7421]
gi|35214632|dbj|BAC91999.1| farnesyl-diphosphate farnesyltransferase [Gloeobacter violaceus PCC
7421]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 28/303 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FC ++L +VSR+FA+ I+ L L AV YL+ R DT+EDD + KV +L F
Sbjct: 17 FCNAILPRVSRTFAISIRFLPGRLGRAVLTAYLLCRIADTIEDDPAASAGEKVRLLGEFM 76
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFH----HVSTAFLELGKGYQDAIEDITKR----MGAG 150
+ E T V + H H + EL +G I KR M G
Sbjct: 77 AGFDEVETARKFPTLAQSVSGEAAHVELVHHTDLVFELFEGVPAPSRQIVKRWVGEMVEG 136
Query: 151 MAKFICK-----EVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAPDSL----SNS 200
M KF+ ++++++Y+EYCYYVAG VG L+ L++A + + D A + +
Sbjct: 137 MQKFVALYPHGIRIQTLEEYNEYCYYVAGTVGHLLTDLWHAHAPSVDRAKYTALLEHCEA 196
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
G LQ NI++D D + ++ P + ++ + + L ++ + +V
Sbjct: 197 FGEALQTVNILKDIAWDAEH--ENSIYVPEQSLREHGSSQQTLLSPHCLEQNRAAIASLV 254
Query: 261 TNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLT 318
A ++ L Y+ A+ A I FC +P + A TL E+ R + G T
Sbjct: 255 ALAWADLDAALVYLLAIPRRAVPIRLFCILPLLFAYATLR------EITRSTAMLTSGGT 308
Query: 319 AKV 321
K+
Sbjct: 309 VKI 311
>gi|300711654|ref|YP_003737468.1| farnesyl-diphosphate farnesyltransferase [Halalkalicoccus jeotgali
B3]
gi|448296238|ref|ZP_21486298.1| farnesyl-diphosphate farnesyltransferase [Halalkalicoccus jeotgali
B3]
gi|299125337|gb|ADJ15676.1| farnesyl-diphosphate farnesyltransferase [Halalkalicoccus jeotgali
B3]
gi|445582210|gb|ELY36554.1| farnesyl-diphosphate farnesyltransferase [Halalkalicoccus jeotgali
B3]
Length = 355
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 138/334 (41%), Gaps = 43/334 (12%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ + VSR+FAL I L + + +C+ YL+ R DTVED IP + + +L +H
Sbjct: 10 WCHEAVEGVSRTFALTIDVLDEPMSSYICVGYLLCRIADTVEDAHHIPPETQATLLRTYH 69
Query: 99 RHVYD--------------REWHFSCG--TKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
V D EW G T +++V+ V T F AI
Sbjct: 70 -AVLDPDDPTGVETFTESVAEWIPEDGERTADWEVVARTPRVVRT-FERQPDSVIAAIRP 127
Query: 143 ITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLF------YASGT 189
+ +GMA F+ + + + + +EYCYY AG VGL ++ L T
Sbjct: 128 PVLELVSGMALFVERYADSGGLRIRTRTELEEYCYYAAGTVGLLITNLICRNTGPPGEET 187
Query: 190 EDLAPD------SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
E + P + S GL LQ NI +D +D +E + ++ P E +
Sbjct: 188 EGVDPSVERTLYENAESFGLLLQLVNIAKDVYDDYHE--EDNVYLPATWLDAEGVPQERV 245
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFC--AIPQIMAIGTLALCY 301
E +D + + +A ++D +Y+ L + R AIP ++A+GTL
Sbjct: 246 LAAEYADGSTAVVKRTAEHARTFLDDAQRYLETLPEVEGNRLAAWAIPYLLAVGTLRELS 305
Query: 302 NNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYL 333
E + VK+ R ++ R TD L
Sbjct: 306 ARPEDALSERDVKVSRSEVGAIVSRMLGETDSAL 339
>gi|357406422|ref|YP_004918346.1| squalene/phytoene synthase [Methylomicrobium alcaliphilum 20Z]
gi|351719087|emb|CCE24761.1| Squalene/phytoene synthase [Methylomicrobium alcaliphilum 20Z]
Length = 366
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 24/276 (8%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL +L V YL+ R +DTVED+ S+ D K F V
Sbjct: 26 LLEGVSRTFALTIPQLPENLYRPVANAYLLCRIVDTVEDEVSLSPDQKKIFCERFIETVK 85
Query: 103 DREWHFSCGTKEYKVLMDQ-------FHHVSTAFLELGKGYQ----DAIEDITKRMGAGM 151
+L +Q ++ +++ + +A+ + M GM
Sbjct: 86 TGHGANDFAADLSPLLSEQTIPAEHTLIGLTPRVIQITHSFDPQQIEALATCVETMAQGM 145
Query: 152 AKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD----SLSNSMGL 203
F + + ++ D D+YCYYVAG VG L+KLF E A LS S G
Sbjct: 146 PIFQAQNLSNGLPTMADMDKYCYYVAGCVGEMLAKLFCHYSPEIAAHRERLLELSVSFGQ 205
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
LQ TNI++D +D + + + P++I+ + L L E + + + L +++ A
Sbjct: 206 GLQMTNILKDIWDDAS---RGVCWLPQDIFDETGFDLSTLTPETDDENFRKGLEHLISIA 262
Query: 264 LMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTL 297
H+ + L Y + H I FC MA+ TL
Sbjct: 263 HGHLRNALTYTQLIPSHETGIRNFCLWALGMAVLTL 298
>gi|3164081|emb|CAA71097.1| squalene synthase [Methylococcus capsulatus str. Bath]
Length = 362
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 24/280 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
F L VSR+FAL I +L L V YL+ R +DT+ED+ ++ + K F
Sbjct: 20 FQAHFLDGVSRTFALTIPRLPEGLARPVSNGYLLCRIVDTIEDEVALTSTQKRRYCEHFA 79
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAF-------LELGKGY----QDAIEDITKRM 147
R V + + +L DQ + + G+ Q+A+ + M
Sbjct: 80 RVVAGTAPAAPLADELFPLLSDQTLAAERELIAAIPRVISITHGFAAPQQEALAECVATM 139
Query: 148 GAGMAKFICKE----VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS----LSN 199
GMA+F K+ +E + +YCYYVAG+VG L++LF E A S L+
Sbjct: 140 SRGMAEFQDKDLRHGLEDLRQMGDYCYYVAGVVGEMLTRLFCHYSPEIAAHRSRLMELAC 199
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
G LQ TNI++D +D + + P+E++++ L +L+ + V+ +
Sbjct: 200 PFGQGLQMTNILKDLWDDHA---RGVCWLPQEVFTECGFSLTELRPHHANPDFVRGFERL 256
Query: 260 VTNALMHVEDCLKYMSALRDH--AIFRFCAIPQIMAIGTL 297
+ A H+ + L+Y + H I FC MA+ TL
Sbjct: 257 IGVAHAHLRNALEYTLLIPRHETGIREFCLWALGMAVLTL 296
>gi|374365197|ref|ZP_09623290.1| farnesyl-diphosphate farnesyltransferase [Cupriavidus basilensis
OR16]
gi|373103332|gb|EHP44360.1| farnesyl-diphosphate farnesyltransferase [Cupriavidus basilensis
OR16]
Length = 350
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 31/278 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++
Sbjct: 2 PNPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIPPRQRL 61
Query: 92 PILIAFHRHVYD--------REWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDA 139
+L+A V R K+ KVL++ T +L + A
Sbjct: 62 ELLLALRDQVNGATDDGTLMRRLAAEVAGKQALSDEKVLLESLGPALTVLSQLNGADRTA 121
Query: 140 IEDITKRMGAGMA----KFICKEVESI------DDYDEYCYYVAGLVGLGLSKLFYASGT 189
+ +I + GM F ++ I ++ D+Y Y VAG VG +K+ YA
Sbjct: 122 VREIVSTLTTGMEFDLRTFPDEDSGQIGVLREWEELDQYTYLVAGCVGEFWTKMTYAHMP 181
Query: 190 EDLAPDSLSNSM-----GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
L D+ + + G LQ TN++RD +D+ I +C + P + +Y +DL
Sbjct: 182 GTLKGDAEAMLLRGVRFGKALQMTNVLRDCAKDLR-IGRC--YLPEAMLDRYGLTPQDLL 238
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
NS +A L ++ L H + + Y A+ +I
Sbjct: 239 IPGNSARAKPLLFALIRATLDHFREAVDYTFAIPAFSI 276
>gi|209517900|ref|ZP_03266733.1| Squalene/phytoene synthase [Burkholderia sp. H160]
gi|209501616|gb|EEA01639.1| Squalene/phytoene synthase [Burkholderia sp. H160]
Length = 348
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 33/279 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L T +R+ V + YL+ RA DT+ D + I D ++
Sbjct: 2 PNPTRAFLLGPLLKGVSRSFYLTLRVLPTGMRDPVGLAYLLARAADTIADTSLIAPDQRL 61
Query: 92 PILIAFHRHV---------YDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDA 139
+L+A V + R E + ++L++ +L + + A
Sbjct: 62 ELLLALRDQVNGVAVDSAPFQRIAAEVAGQQAQSDERLLLESLSPALDVLAQLSESDRHA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDYDE---YCYYVAGLVGLGLSKLFYA-- 186
+ I + GM +F + ++ ++ +YDE Y Y VAG VG + + YA
Sbjct: 122 VRAIVTTLTEGM-EFDLRTFPDERSGQLAALREYDELDRYTYLVAGCVGEFWTTMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT P ++++ G LQ TN++RD +D+ I +C + P+ + ++ DL
Sbjct: 181 PGTLKEQPGTMTHRGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPQSMLERHGLSARDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
NS +A L +++ L H L Y A+ A+
Sbjct: 238 LQPANSMRARPLLIELLRKTLEHFRAALDYTLAIPASAV 276
>gi|257386965|ref|YP_003176738.1| squalene/phytoene synthase [Halomicrobium mukohataei DSM 12286]
gi|257169272|gb|ACV47031.1| Squalene/phytoene synthase [Halomicrobium mukohataei DSM 12286]
Length = 351
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
WAF + VSR+FAL ++ L + VC YL+ R DT+ED+ +IP + +L
Sbjct: 16 WAF--EAVQSVSRTFALSVELLDEPMTEWVCTGYLLCRTADTIEDEPTIPMGRRAELLET 73
Query: 97 FHRHVYDR-----EWHFSC--------GTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI 143
F + + E S G ++ VL Q + + QD + I
Sbjct: 74 FDAMLAEESETTVEDFLSAVEPETPADGGDDWAVL-GQTDRIVRLWRSFPDPVQDGMRSI 132
Query: 144 TKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASG--TEDLAP 194
T+ M GMA + + +E++D+ +EYC+YVAG VG KL A +
Sbjct: 133 TREMATGMADILRRHEDSGGLRLETLDELEEYCWYVAGTVGQLFMKLQTARADPDDPTPD 192
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
+ + L LQ NI +D D +E + ++ P E ++ E + E+S +
Sbjct: 193 PEDARAFALLLQLVNIAKDVRADWDE--EHNVYLPGEWLAEEELDHEAVAEPEHSTAVAR 250
Query: 255 CLNDMVTNALMHVEDCLKYMSALRD---HAIFRFCAIPQIMAIGTL 297
+ +V A + +Y+S + + + A+P ++A+GT+
Sbjct: 251 VVGRVVDQAADYAHGAQRYLSTVPEGDNGGLLEATALPYLLALGTI 296
>gi|375335581|ref|ZP_09776925.1| squalene/phytoene synthase [Succinivibrionaceae bacterium WG-1]
Length = 333
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 65/334 (19%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVK------------V 91
L KVSR+FAL I L +L++ V YL+ R DT+EDD + D K
Sbjct: 13 LQKVSRTFALTIPLLPKELQDWVGNAYLLCRIADTIEDDPKLSNDDKKAELQNFIDVLNC 72
Query: 92 PILI-AFHRHVYDREWHFSCGTKEYKV-LMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
P+L+ ++ + D+ KE +V L+ +V + + + + M
Sbjct: 73 PVLLESWSNSIADK---LKASAKESEVYLLKDIEYVVGRYYSYNETVRHILRHGVDIMRK 129
Query: 150 GMAKFICKE-VESIDDYDEYCYYVAGLVGLGLSKLFYASGTE------DLAPDSLSNSMG 202
GM++F E + ++ + D YCY VAG+VG L+ LF T+ DL P LS S G
Sbjct: 130 GMSEFGRWENISNLHEVDCYCYCVAGVVGELLTYLFAEHSTKIKSNLNDLLP--LSVSFG 187
Query: 203 LFLQKTNIIRDYLED----INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLND 258
LQ TNI++D +D I+ +P +EI +K +
Sbjct: 188 EGLQLTNILKDIWDDLERGIHWLPLGDSETEKEIKTK----------------------E 225
Query: 259 MVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV--VKMR 314
V+ A H L Y+ + ++ I FC + ++AI TL Y N +F+ VK+
Sbjct: 226 YVSIAYGHTLQALDYIKQMPRKEKGIREFCLLANLLAIATLCNIYKN-PLFKKASDVKIS 284
Query: 315 RGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINK 348
R ++ +Y+ + FSN + +I K
Sbjct: 285 RKTVKRIF--------IYIKLFSFSNKMIDRIAK 310
>gi|374309909|ref|YP_005056339.1| squalene/phytoene synthase [Granulicella mallensis MP5ACTX8]
gi|358751919|gb|AEU35309.1| Squalene/phytoene synthase [Granulicella mallensis MP5ACTX8]
Length = 349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 29/266 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF + ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++ V
Sbjct: 13 LLKSVSRSFYITLRVLPAGMRDPIGLAYLLARAADTIADTSLIPPGQRMELLLSLRNQVN 72
Query: 103 D-------REWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
R G+++ KVL++ T +L + ++A+ DI + GM
Sbjct: 73 GTSDEAALRRMSAEVGSQQADSDEKVLLESLGAALTVLSQLSQSDREAVRDIVTTLTTGM 132
Query: 152 ----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKL--FYASGTEDLAPD---S 196
A + + D+Y Y VAG VG +K+ + GT P+ S
Sbjct: 133 EFDLRTFPDEASGRIVALREFSELDQYTYMVAGCVGEFWTKMTFMHVPGTFAGNPEVVLS 192
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
G LQ TN++RD +D+ I +C + P + ++ +DL E S A L
Sbjct: 193 RGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPSTMLDRFGLSPQDLLLPETSLPARPLL 249
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAI 282
++V AL + + ++Y L A+
Sbjct: 250 FELVEKALENFREAIEYTLCLPAFAV 275
>gi|172058463|ref|YP_001814923.1| squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
gi|171990984|gb|ACB61906.1| Squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
Length = 274
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL---IAFHR 99
+L SR+F + I +L +L+ AV YL +RA+D +ED +PT+VK +L R
Sbjct: 14 VLKATSRTFYIPISRLSQELQEAVGAAYLCMRAIDEIEDHEELPTEVKTTLLRETALMMR 73
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGMAKFI 155
+D + +Y DQ V+ E G + + D T M GMA +
Sbjct: 74 GTFDAH-AYQAMIADYA---DQLPEVTLRLAEWIAYCPAGIRAKVLDSTAEMAEGMATWA 129
Query: 156 CKE--VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ V++ D DEY YYVAGLVG+ LS ++Y + + G LQ NI+R+
Sbjct: 130 ERDWTVKTEADLDEYTYYVAGLVGVMLSDIWYWKAG-IVTDKQQAIGFGRGLQAVNILRN 188
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
ED F P W+ M A ++ + Y
Sbjct: 189 QQEDAER--GVGYFPPG--WTT---------------------ETMFEYARENLAEADAY 223
Query: 274 MSAL-RDHAIFRFCAIPQIMAIGTL 297
++++ + I+ FC IP +A GTL
Sbjct: 224 LASIPKQTTIYEFCKIPLALAHGTL 248
>gi|384083968|ref|ZP_09995143.1| squalene synthase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 355
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 140/344 (40%), Gaps = 54/344 (15%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
A+ L VSR+FAL I QL LR AV YL+ R DT+EDD +P + K F
Sbjct: 19 AWQQQSLQLVSRTFALTIPQLPVALRAAVGNGYLLCRIADTIEDDPVMPWEEKAHWQQVF 78
Query: 98 HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFL-------------------ELGKGYQD 138
+ V G E V + F +A + Q
Sbjct: 79 LQVVE--------GQMEPAVFAEGFAAQLSADMPEAEHDLVRHTADVVQITHSFSATQQA 130
Query: 139 AIEDITKRMGAGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP 194
A+ + MGAGMA+F K + + D YCY VAG+VG L+ LF A
Sbjct: 131 ALARCVRIMGAGMAEFQQHASLKGLVDMPAMDHYCYVVAGVVGEMLTSLFVEYEPRLRAQ 190
Query: 195 DS----LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 250
++ L+ S G LQ TNI++D +D + + P ++++Y + ++ +
Sbjct: 191 ETEMQRLAVSFGQGLQMTNILKDIWDDWA---RGVSWMPSSVFARYGCDIAAVQPGSHDP 247
Query: 251 KAVQCLNDMVTNALMHVEDCLKY-------MSALRDHAIFRFCAIPQIMAIGTLALCYNN 303
L D++ A H+E+ L+Y + +RD FC MA+ TL N
Sbjct: 248 GFQAALQDLLDIAAGHLENALQYTLMIPADQTGMRD-----FCLWALAMAVLTLRRIAGN 302
Query: 304 IEVFRGV-VKMRRGLTAKVI--DRTNNMTDVYLAFYDFSNILKP 344
G VK+ R V+ R + +D L F +KP
Sbjct: 303 PAFASGAEVKISRNSVQWVVMLSRLMHRSDGLL-LASFRAGIKP 345
>gi|88811395|ref|ZP_01126650.1| Squalene/phytoene synthase [Nitrococcus mobilis Nb-231]
gi|88791284|gb|EAR22396.1| Squalene/phytoene synthase [Nitrococcus mobilis Nb-231]
Length = 361
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH---- 98
+L VSR+FAL I QL LR +V YL+ R DT+ED+ ++ K F+
Sbjct: 21 LLPGVSRTFALTIPQLPEPLRTSVTNAYLLCRIADTIEDEPTLSARQKQSFHDRFNVIVA 80
Query: 99 -------RHVYDREWHFS-CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
R D S + + + L+ Q V L + A+E + M G
Sbjct: 81 GEGEPPSRFAADLYPMLSETMSADERELIRQLPGVIAITHSLPAKERAALERCVRIMCEG 140
Query: 151 MAKFICKE----VESIDDYDEYCYYVAGLVGLGLSKLF------YASGTEDLAPDSLSNS 200
M F ++ I +++ YCYYVAG+VG L+ LF A E L +LS S
Sbjct: 141 MPWFQRNRRQGGLDDIFEFERYCYYVAGVVGEMLTDLFCQYSVDIAHQRERL--RALSVS 198
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC-LNDM 259
G LQ TNI++D ED + + PR+++ ++ +L DL E + D A + ++
Sbjct: 199 FGAGLQMTNILKDVWEDRR---RGACWLPRDVFQQFGFELCDLS-EAHYDPAFGAGIQEL 254
Query: 260 VTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTL 297
V A H+ + L Y+ L + I RFC MA TL
Sbjct: 255 VARAHGHLRNALAYVQLLPPGEVGIRRFCLWALAMAALTL 294
>gi|22298640|ref|NP_681887.1| farnesyl-diphosphate farnesyltransferase [Thermosynechococcus
elongatus BP-1]
gi|22294820|dbj|BAC08649.1| farnesyl-diphosphate farnesyltransferase [Thermosynechococcus
elongatus BP-1]
Length = 359
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 26/301 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FC +L +VSR+FAL I+ L +L AV + YL+ R DTVEDD K +L
Sbjct: 26 FCQEILPQVSRTFALSIRFLPGNLGRAVLVAYLICRIADTVEDDPVASIAAKTALLDHLL 85
Query: 99 R--------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
+ + Y G + L+ V T + L + Q ++ M G
Sbjct: 86 QCFDSPALANSYGETARGVQGEPAHVQLVKHTGIVFTLYRSLPRTSQQHVQRWVSEMVHG 145
Query: 151 MAKFI-----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS------N 199
M KFI ++++ +Y EYCYYVAG VG L+ L++ + + D
Sbjct: 146 MKKFINLYPNGIRIQTLAEYKEYCYYVAGTVGYLLTDLWHEH-SPSIGADEYQVLLKRCA 204
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
+ G LQ NI++D D + ++ P E + + L E+ + + ++
Sbjct: 205 AFGEALQTVNILKDIAWDAEH--ENSIYIPNESLILQGSSHQTLLSAEHLQQNHAAIKEL 262
Query: 260 VTNALMHVEDCLKYMSALRDHAI-FR-FCAIPQIMAIGTLALCYNNIEVFR--GVVKMRR 315
+ A +++ Y+ ++ AI R FC +P + A TL ++ + + G VK+ R
Sbjct: 263 IALAWHDLDEAQAYLLSVPKAAIPIRLFCVLPLLFAYATLRELTHSTAMLQPGGGVKISR 322
Query: 316 G 316
Sbjct: 323 A 323
>gi|424735974|ref|ZP_18164435.1| hypothetical protein C518_0585 [Lysinibacillus fusiformis ZB2]
gi|422950003|gb|EKU44373.1| hypothetical protein C518_0585 [Lysinibacillus fusiformis ZB2]
Length = 273
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 48/293 (16%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
+L SR+F + I L DL+ +V YL +RA+D +ED + DVK+ +L A +
Sbjct: 13 QVLKDTSRTFYIPITFLKNDLKISVAAAYLAMRAIDEIEDHEELSNDVKIDLLSATSELL 72
Query: 102 YDREWHFSCGTKEYKVLM----DQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGMAK 153
D + + Y+ L+ +Q VS + + + ++ T M GMAK
Sbjct: 73 KD-----NFNNEAYQSLLAPYAEQLPEVSLRLADWLTFCPEESRKIVQASTSEMAFGMAK 127
Query: 154 FICK--EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNII 211
+ +V + +D D+Y YYVAGLVG LS+L +A G L+ G LQ NI+
Sbjct: 128 WAKANWQVRTREDLDDYTYYVAGLVGTMLSEL-WAWGAGVQTDRELAIGYGRGLQAVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED++E + F P E W++ D+ A ++
Sbjct: 187 RNQHEDLDE--RGVSFVP-EGWTR---------------------ADLFAYAEENLAKAD 222
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRGLTAKVID 323
YM + I FC +P LAL + ++ + G KM R + ++
Sbjct: 223 LYMKDINKRTILLFCRLP-------LALAHKTLKAMQEGREKMTRAEVEQTVE 268
>gi|194699550|gb|ACF83859.1| unknown [Zea mays]
Length = 95
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%)
Query: 313 MRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGV 372
MRRGLTA++ID TN+M+DVY AFY+FS++++ KI+ NDPNA T V +I++ C SG+
Sbjct: 1 MRRGLTARIIDETNSMSDVYTAFYEFSSLIESKIDDNDPNAALTRRHVNSIKQTCKSSGL 60
Query: 373 LNKR 376
+ +R
Sbjct: 61 VKRR 64
>gi|167564873|ref|ZP_02357789.1| squalene/phytoene synthase family protein [Burkholderia
oklahomensis EO147]
Length = 349
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 35 PHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +
Sbjct: 4 PSRAFLLGPLLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLEL 63
Query: 94 LIAFHRHVYDR-----------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
L++ V E + K L++ +L +DA+ D
Sbjct: 64 LLSLRAQVNGAPEPDALARIAGEVAGQQMVSDEKTLLESLGPALAMLSQLSAADRDAVRD 123
Query: 143 ITKRMGAGM----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA--SGTE 190
+ + GM + + + D Y Y VAG VG +++ A G
Sbjct: 124 VVTTLTEGMEFDLLTFPDESSGRIAALREWPELDRYTYLVAGCVGEFWTRMTCAHLPGLL 183
Query: 191 DLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
PD+++ G LQ TN++RD +D+ I +C + P+ + +Y + +DL +
Sbjct: 184 TGHPDAMAERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLDEYGLRADDLLRPD 240
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNN-- 303
S +A L+ +V L H + Y A+ R + C P ++ + TLAL +N
Sbjct: 241 ASLRARPLLHALVRKTLEHFRAGIDYTFAIPRRAPRLRLACVWPIVIGLKTLALLASNDA 300
Query: 304 -IEVFRGVVKMRRGLTAKVI 322
++ R K+RRG ++I
Sbjct: 301 WLDPAR-ASKVRRGDVYRII 319
>gi|167572077|ref|ZP_02364951.1| squalene/phytoene synthase family protein [Burkholderia
oklahomensis C6786]
Length = 349
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 35 PHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +
Sbjct: 4 PSRAFLLGPLLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLEL 63
Query: 94 LIAFHRHVYDR-----------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
L++ V E + K L++ +L +DA+ D
Sbjct: 64 LLSLRAQVNGAPEPDALARIAGEVAGRQMVSDEKTLLESLGPALAMLSQLSAADRDAVRD 123
Query: 143 ITKRMGAGM----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA--SGTE 190
+ + GM + + + D Y Y VAG VG +++ A G
Sbjct: 124 VVTTLTEGMEFDLLTFPDESSGRIAALREWPELDRYTYLVAGCVGEFWTRMTCAHLPGLL 183
Query: 191 DLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
PD+++ G LQ TN++RD +D+ I +C + P+ + +Y + +DL +
Sbjct: 184 TEHPDAMAERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLDEYGLRADDLLRPD 240
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNN-- 303
S +A L+ +V L H + Y A+ R + C P ++ + TLAL +N
Sbjct: 241 ASLRARPLLHALVRKTLEHFRAGIDYTFAIPRRAPRLRLACVWPIVIGLKTLALLASNGA 300
Query: 304 -IEVFRGVVKMRRGLTAKVI 322
++ R K+RRG ++I
Sbjct: 301 WLDPAR-ASKVRRGDVYRII 319
>gi|385803713|ref|YP_005840113.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloquadratum walsbyi C23]
gi|339729205|emb|CCC40437.1| squalene synthase [Haloquadratum walsbyi C23]
Length = 357
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 140/339 (41%), Gaps = 36/339 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ + VSR+FAL + L + + +C+ YLV R DT+ED + I ++ + +L +
Sbjct: 17 WCHRSVQGVSRTFALTVDVLDEPMSSYICLGYLVCRIADTIEDASHISSETQAELLETYD 76
Query: 99 RHVYDREWHFSCGTKEYKV--------LMDQFHHVSTA------FLELGKGYQDAIEDIT 144
D E T V L D + V A F EL Q AI
Sbjct: 77 -AALDPENEIDAATFASAVEPHLPTGELDDDWTVVRNAPRVLRTFGELPDEVQKAIIPPA 135
Query: 145 KRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
+ + GM F+ + +++ ++ +EYCYY AG VG ++ L L
Sbjct: 136 RELVQGMTTFVDRYSDTGGLRIQTREELEEYCYYAAGTVGNLITNLLTRGSVASERRQQL 195
Query: 198 ---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
+ GL LQ N+ +D +D + + ++ P E + + L E+ A
Sbjct: 196 YETAEEFGLLLQLVNVSKDVYDDYTD--EDNIYLPAEWLADEDVPQDQLVDPEHEAGAAT 253
Query: 255 CLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTLALCYNNIE--VFRGV 310
+ + A ++D Y+ LRD AIP ++A+GTL + E +
Sbjct: 254 VVRRTASLAGSFLDDAETYLETIPLRDGNTLEAWAIPFLLAVGTLRELLSRPEDALSETD 313
Query: 311 VKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
VK+ R V++ + TD D N L+ +I +
Sbjct: 314 VKISREEVFAVVEEMSGTTD-----RDVLNRLRTRIAEE 347
>gi|23097924|ref|NP_691390.1| hypothetical protein OB0469 [Oceanobacillus iheyensis HTE831]
gi|22776148|dbj|BAC12425.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA----FH 98
+L + SR+F + I+ L LR V YL +RA+D +ED ++ + K +LI
Sbjct: 14 VLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSSKQELLIQTSQLLQ 73
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK- 157
+D + S +L + ++ L ++ T M GMAK++ +
Sbjct: 74 AETFDNVAYQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTSEMAEGMAKWVARD 133
Query: 158 -EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
EV + +D DEY YYVAGLVG+ LS ++ + GTE L+ G LQ NI+R+
Sbjct: 134 WEVNTKEDLDEYTYYVAGLVGVMLSDIWKWYDGTE--TDRELAIGYGRGLQAVNILRNID 191
Query: 216 EDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMS 275
ED + F+P + W+K +M A M++ +YM
Sbjct: 192 EDAE---RGVGFFPDD-WTK---------------------KEMFEYANMNLHMGEQYME 226
Query: 276 ALRDHAIFRFCAIPQIMAIGTLA 298
+ I FC IP +A TL
Sbjct: 227 QISTKNILLFCRIPLALAQKTLT 249
>gi|410457975|ref|ZP_11311740.1| squalene/phytoene synthase [Bacillus azotoformans LMG 9581]
gi|409931910|gb|EKN68882.1| squalene/phytoene synthase [Bacillus azotoformans LMG 9581]
Length = 269
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I +L L + V YL +R++D +ED +P + K+ +L + +
Sbjct: 14 VLTQTSRTFVIPISRLEGSLNHVVMAAYLCMRSIDEIEDHPILPKEDKIRLLRSIGEQI- 72
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK-------RMGAGMAKFI 155
GT V D + + + +IT+ +M GMA +
Sbjct: 73 -----LKIGTPLSPVFADLDDVLPEVTVRIDDWLTLLPSEITEKVRFFVSKMAYGMASWT 127
Query: 156 CKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ V + D D+Y YYVAGLVG LS L+ + G A L+ + G LQ NIIR
Sbjct: 128 ERNWVVRTEKDLDDYTYYVAGLVGELLSTLWKWHDGINTDA--DLAIAFGRGLQAVNIIR 185
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLK 272
+ ED + + F+P + W++ M+ A + +
Sbjct: 186 NRGEDQD---RGVSFYP-DGWTQ---------------------ERMIEYAKKQLSQADQ 220
Query: 273 YMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVID 323
Y++++ I+ FC+IP +A GTL + NN E K++R K++D
Sbjct: 221 YIASIHSKHIYEFCSIPLALAYGTLRVIENNRE------KLKREEVIKIVD 265
>gi|299535135|ref|ZP_07048460.1| hypothetical protein BFZC1_03893 [Lysinibacillus fusiformis ZC1]
gi|298729452|gb|EFI70002.1| hypothetical protein BFZC1_03893 [Lysinibacillus fusiformis ZC1]
Length = 273
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 48/293 (16%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
+L SR+F + I L DL+ +V YL +RA+D +ED + DVK +L A +
Sbjct: 13 QVLKDTSRTFYIPITFLKNDLKISVAAAYLAMRAIDEIEDHEELSNDVKFDLLSATSELL 72
Query: 102 YDREWHFSCGTKEYKVLM----DQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGMAK 153
D + + Y+ L+ +Q VS + + + ++ T M GMAK
Sbjct: 73 KD-----NFNNEAYQSLLAPYAEQLPEVSLRLADWLSFCPEESRKIVQASTSEMAFGMAK 127
Query: 154 FICK--EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNII 211
+ +V + +D D+Y YYVAGLVG LS+L +A G L+ G LQ NI+
Sbjct: 128 WAKANWQVRTREDLDDYTYYVAGLVGTMLSEL-WAWGAGVQTDRELAIGYGRGLQAVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED++E + F P E W++ D+ A ++
Sbjct: 187 RNQHEDLDE--RGVSFVP-EGWTR---------------------ADLFAYAEENLAKAD 222
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRGLTAKVID 323
YM + I FC +P LAL + ++ + G KM R + ++
Sbjct: 223 LYMKDINKRTILLFCRLP-------LALAHKTLKAMQEGREKMTRAEVEQTVE 268
>gi|345022921|ref|ZP_08786534.1| hypothetical protein OTW25_16665 [Ornithinibacillus scapharcae
TW25]
Length = 272
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 43/272 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML + SR+F + I+ L LR V YL +RA+D +ED + ++K +L + +
Sbjct: 14 MLKETSRTFYIPIKLLKPRLRKTVASAYLCMRAIDEIEDHEQMDAEIKQHLLRSTSELLK 73
Query: 103 DREWHFSCGTKEYKVLMDQFHH-VSTAFLELG-------KGYQDAIEDITKRMGAGMAKF 154
D + + Y L++ + + + L +G + + D T M GMA +
Sbjct: 74 D-----NFNVESYMQLIEPYQKMLPEVTIRLADWVSFCPEGIVEKVLDSTSIMARGMADW 128
Query: 155 ICKEVESI--DDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+ K + I +D DEY YYVAGLVG+ LS ++ + TE L+ G LQ NI+
Sbjct: 129 VGKNWQIITKEDLDEYTYYVAGLVGVMLSDIWRWYDNTE--TDSDLAIGYGRGLQAVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED + K F+P + W++ +DM A ++
Sbjct: 187 RNQEEDADRGVK---FFP-DTWTR---------------------DDMFEYASANLAKAD 221
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNN 303
+YM ++ I FC IP +A TL N
Sbjct: 222 EYMKDIKTKNIILFCRIPLALAHRTLHALKNG 253
>gi|293396145|ref|ZP_06640425.1| squalene synthase [Serratia odorifera DSM 4582]
gi|291421278|gb|EFE94527.1| squalene synthase [Serratia odorifera DSM 4582]
Length = 343
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 35/297 (11%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
AF ML VSR+FAL I QL ++L+ V YL+ R DT+ED+ +I + I +AF
Sbjct: 2 AFQNGMLPLVSRTFALTIPQLPSELQPVVINAYLLCRMADTIEDEPTISAEDNHNIGLAF 61
Query: 98 HRHVYDRE--WHFSCGT----------KEYKVLM--DQFHHVSTAFLELGKGYQDAIEDI 143
V + F+ T E K+ + + H++ F + QDA+
Sbjct: 62 LDVVQGKTPIQPFADNTFQRLSEATPDAERKLFLHFPKILHITGKF---NQPQQDAVFRC 118
Query: 144 TKRMGAGMAKF--ICKE--VESIDDYDEYCYYVAGLVGLGLSKLFY----ASGTEDLAPD 195
K M AGMA++ I + + S+ YCY AG+VG L+ LF A +
Sbjct: 119 IKIMLAGMAQYHAIARADGLPSLVSLQHYCYCAAGVVGEMLTDLFLEYEPAIACDRHTLY 178
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
+ S S G LQ TNI++D ED N + + P+++ +++ L ++N
Sbjct: 179 AQSRSFGQGLQLTNILKDLWEDHN---RGICWLPKDVLARHGVDRSSLSRDQNDPVLAAV 235
Query: 256 LNDMVTNALMHVEDCLKY---MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRG 309
+N+++ A + D L Y + + I RFC + IG L NI G
Sbjct: 236 INELIDLAHASLLDGLDYALSFTGPKLRGIRRFC----LWTIGLALLTLRNIRSSPG 288
>gi|218665783|ref|YP_002426526.1| phytoene/squalene synthetase family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218517996|gb|ACK78582.1| phytoene/squalene synthetase family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 347
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 143/337 (42%), Gaps = 40/337 (11%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
A+ L VSR+FAL I QL LR+AV YL+ R DT+EDD +P + K F
Sbjct: 11 AYQAQSLQVVSRTFALTIPQLPEALRDAVGNGYLLCRIADTIEDDPDMPWEKKACWQAKF 70
Query: 98 HRHVYDREWHFSCGTKEYKVL---MDQFHH--------VSTAFLELGKGYQDAIEDITKR 146
+ V + + L M + H V L Q A+ +
Sbjct: 71 LQVVEGADDPAAFAAALGADLSPEMPEAEHDLIRHTPEVVAITHSLNPTQQAALSRCVRI 130
Query: 147 MGAGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA----SGTEDLAPDSLS 198
MG GMA+F + + + D YCY VAG+VG L+ LF D L+
Sbjct: 131 MGMGMAEFQQHASLQGLADMAALDRYCYVVAGVVGEMLTSLFVEFEPLLAEHDAEMQRLA 190
Query: 199 NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC-LN 257
S G LQ TNI++D +D + + PR ++ ++ + ++ + D A Q L
Sbjct: 191 VSFGQGLQMTNILKDIWDDWQ---RGVSWMPRALFQRHGCDIAGVR-PGSRDPAFQAGLT 246
Query: 258 DMVTNALMHVEDCLKY-------MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV 310
+++ A H+++ L+Y + +RD FC MA+ TL N G
Sbjct: 247 ELLGIAANHLQNALRYTLLIPAGQTGMRD-----FCLWAIAMAVLTLRRIAENPAFASGS 301
Query: 311 -VKMRRGLTAKVI--DRTNNMTDVYLAFYDFSNILKP 344
VK+ R +V+ R + +D L + F +KP
Sbjct: 302 EVKISRRSVHRVVFLSRLLHRSDALLQ-WSFRVGVKP 337
>gi|413962266|ref|ZP_11401494.1| farnesyl-diphosphate farnesyltransferase [Burkholderia sp. SJ98]
gi|413931138|gb|EKS70425.1| farnesyl-diphosphate farnesyltransferase [Burkholderia sp. SJ98]
Length = 353
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 35/313 (11%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
P +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++ +
Sbjct: 4 SPRAFLLGPLLKSVSRSFYLTLRILPAGMRDPIGLAYLLARAADTIADTSLISPQRRLEL 63
Query: 94 LIAFHRHVYDR-----------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
L++ + E + + L++ +L + A+ D
Sbjct: 64 LLSLRAQINGAPDDGALARIAGEVAGQQAQPDERALLESLDAALAILPQLNADDRAAVRD 123
Query: 143 ITKRMGAGM-------AKFICKEVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTE 190
I + GM E+ ++ ++ D Y Y VAG VG +K+ YA GT
Sbjct: 124 IVTTLSTGMEFDLRTFPDETSGEIVALREFGELDRYTYLVAGCVGEFWTKMTYAHMPGTL 183
Query: 191 DLAPDS---LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
APD+ L G LQ TN++RD +D+ I +C + P + +++ +D+ E
Sbjct: 184 KAAPDTMLALGVRFGKALQMTNVLRDCAKDL-RIGRC--YLPESMLARHGLTPQDVLRPE 240
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNNIE 305
S +A L +++ +L ED + Y A+ AI R C P ++ + TL L N E
Sbjct: 241 TSARARPVLFELLRTSLALFEDAVDYTLAIPASAIRLRLACLWPIMIGLDTLVLLARN-E 299
Query: 306 VF---RGVVKMRR 315
+ R V K+RR
Sbjct: 300 AWLDPRKVSKVRR 312
>gi|163791372|ref|ZP_02185783.1| hypothetical protein CAT7_10480 [Carnobacterium sp. AT7]
gi|159873342|gb|EDP67435.1| hypothetical protein CAT7_10480 [Carnobacterium sp. AT7]
Length = 276
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 48/299 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA----FH 98
+L + SR+F + I L DL+ +V YLVLRA+D +ED SI K +L+ F
Sbjct: 13 VLKETSRTFYIPITFLKADLKYSVASAYLVLRAIDEIEDHESIQNTTKFDLLMQLSELFK 72
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGMAKF 154
R E+ C + +Q VS ++ +G + + + M GMAK+
Sbjct: 73 RPFTQEEY---CDI--IAPVKEQLPEVSIRLVDWIQACPEGSRSLMMETASEMAFGMAKW 127
Query: 155 ICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+ +V + +D D+Y YYVAG VG+ LSKL+ ++ G E + L+ G LQ NI+
Sbjct: 128 AKENWQVHTKEDLDDYTYYVAGCVGVYLSKLWNWSYGQE--TNEELAIEFGRGLQIVNIL 185
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R+ ED E + F P + WS+ + + A ++
Sbjct: 186 RNQKEDKEE--RSVSFVPDD-WSR---------------------DQLFAYADENLAQAD 221
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTD 330
Y+ L + + FC +P A +LA + +G KM R + + D
Sbjct: 222 AYIETLNEKSTILFCRLPLAFAHKSLAA------MKKGEKKMSRAEVEQTVKEVQKEVD 274
>gi|322371735|ref|ZP_08046278.1| Squalene/phytoene synthase [Haladaptatus paucihalophilus DX253]
gi|320548620|gb|EFW90291.1| Squalene/phytoene synthase [Haladaptatus paucihalophilus DX253]
Length = 356
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 35/301 (11%)
Query: 26 QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI 85
A P E +C+ + VSR+FA+ I L + +A+C+ YL+ R DT+ED I
Sbjct: 8 SATADTPSEADLEWCHQAVQGVSRTFAITIDLLDAPMADAICVGYLLCRVADTIEDAGHI 67
Query: 86 PTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQF-----------------HHVSTA 128
P + +L + + + S E++ +D++ +
Sbjct: 68 PPAEQTRLLYQYDAVLDPTD---STTIDEFREDVDEWIPDDDGDDADWSVVAHAPRIVAT 124
Query: 129 FLELGKGYQDAIEDITKRMGAGMAKFICKEVE-------SIDDYDEYCYYVAGLVGLGLS 181
F ++A+ + + GMA F+ + + + + +EYCYYVAG VG ++
Sbjct: 125 FDTCSPSVRNAVRPPVRELVGGMAMFVERHADEGGLRIGTRAELEEYCYYVAGTVGELIT 184
Query: 182 KLFY--ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVN- 238
L A + S S L LQ N+ +D D ++ + ++ P E W + +
Sbjct: 185 NLVCRDADSAQANRLRETSESFALLLQLVNVTKDVYVDYHD--ENNVYLP-ETWLEDADV 241
Query: 239 KLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCA--IPQIMAIGT 296
+DL E+SD + +A +D Y+ ++ R A IP ++A+GT
Sbjct: 242 PQDDLCDPEHSDDVAAVVERTADHAHSFTDDAQTYLESMPRERGNRLVAWTIPYLLAVGT 301
Query: 297 L 297
L
Sbjct: 302 L 302
>gi|198283891|ref|YP_002220212.1| squalene synthase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198248412|gb|ACH84005.1| Squalene synthase [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 401
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 143/337 (42%), Gaps = 40/337 (11%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
A+ L VSR+FAL I QL LR+AV YL+ R DT+EDD +P + K F
Sbjct: 65 AYQAQSLQVVSRTFALTIPQLPEALRDAVGNGYLLCRIADTIEDDPDMPWEKKACWQAKF 124
Query: 98 HRHVYDREWHFSCGTKEYKVL---MDQFHH--------VSTAFLELGKGYQDAIEDITKR 146
+ V + + L M + H V L Q A+ +
Sbjct: 125 LQVVEGADDPAAFAAALGADLSPEMPEAEHDLIRHTPEVVAITHSLNPTQQAALSRCVRI 184
Query: 147 MGAGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA----SGTEDLAPDSLS 198
MG GMA+F + + + D YCY VAG+VG L+ LF D L+
Sbjct: 185 MGMGMAEFQQHASLQGLADMAALDRYCYVVAGVVGEMLTSLFVEFEPLLAEHDAEMQRLA 244
Query: 199 NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC-LN 257
S G LQ TNI++D +D + + PR ++ ++ + ++ + D A Q L
Sbjct: 245 VSFGQGLQMTNILKDIWDDWQ---RGVSWMPRALFQRHGCDIAGVR-PGSRDPAFQAGLT 300
Query: 258 DMVTNALMHVEDCLKY-------MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV 310
+++ A H+++ L+Y + +RD FC MA+ TL N G
Sbjct: 301 ELLGIAANHLQNALRYTLLIPAGQTGMRD-----FCLWAIAMAVLTLRRIAENPAFASGS 355
Query: 311 -VKMRRGLTAKVI--DRTNNMTDVYLAFYDFSNILKP 344
VK+ R +V+ R + +D L + F +KP
Sbjct: 356 EVKISRRSVHRVVFLSRLLHRSDALLQ-WSFRVGVKP 391
>gi|404417913|ref|ZP_10999695.1| hypothetical protein SARL_08539 [Staphylococcus arlettae CVD059]
gi|403489629|gb|EJY95192.1| hypothetical protein SARL_08539 [Staphylococcus arlettae CVD059]
Length = 272
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH---R 99
+L + SR+F + I L +L++ V YLV+RA+D +ED + D K IL+ +
Sbjct: 13 VLKETSRTFYIPITFLDKELKHTVASAYLVMRAIDEIEDHEEVENDTKHAILMQVSDLLK 72
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI-------TKRMGAGMA 152
+D E + + D+ V+ L LG + E+ M GMA
Sbjct: 73 QPFDEEQYLQL----LAPVKDKMPEVT---LRLGDWLRACPENTVHIVMNSAHEMAYGMA 125
Query: 153 KFICKE--VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
K++ + +++ +D D+Y YYVAGLVG+ LS ++ S D L+ G LQ NI
Sbjct: 126 KWVKADWNIQTKEDLDDYTYYVAGLVGVMLSDIWEQSAGVKTDRD-LAIGYGRGLQAVNI 184
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+R+ ED +E + F P + W++ Q L D L ++
Sbjct: 185 LRNEQEDYDE--RGVSFVPDD-WTR------------------QDLFDYADENLAKADE- 222
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
YM ++ I FC +P +A TL N E
Sbjct: 223 --YMKSINKKTILLFCRLPLALAHKTLKAMKNGRE 255
>gi|344199424|ref|YP_004783750.1| Squalene/phytoene synthase [Acidithiobacillus ferrivorans SS3]
gi|343774868|gb|AEM47424.1| Squalene/phytoene synthase [Acidithiobacillus ferrivorans SS3]
Length = 347
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 40/331 (12%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV-- 101
L VSR+FAL I QL LR+AV YL+ R DT+EDD +P K F + V
Sbjct: 17 LQAVSRTFALTIPQLPEALRDAVGNGYLLCRIADTIEDDPDLPWGKKAYWQAEFLKVVEG 76
Query: 102 -YDREWHFSCGTKEYKVLMDQFHH--------VSTAFLELGKGYQDAIEDITKRMGAGMA 152
D + M + H V Q A+ + MG GMA
Sbjct: 77 AGDAAAFAAAFGAALSAAMPEAEHDLIRHTPEVVAITHSFTPAQQSALSRCVRIMGMGMA 136
Query: 153 KF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP-----DSLSNSMGL 203
+F + + + D YCY VAG+VG L+ LF LAP L+ S G
Sbjct: 137 EFQQHASLQGLADMAAMDRYCYVVAGVVGEMLTSLF-VDYEPRLAPHDAEMQQLAVSFGQ 195
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
LQ TNI++D +D + + PR ++ ++ + ++ + L++++ A
Sbjct: 196 GLQMTNILKDIWDDWQ---RGVSWMPRAVFQRHGCDIAAVQPGSHDPAFAAGLSELLGIA 252
Query: 264 LMHVEDCLKY-------MSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV-VKMRR 315
H+++ L+Y + +RD FC MA+ TL N G VK+ R
Sbjct: 253 AGHLQNALRYTLLIPAEQTGMRD-----FCLWAIAMAVLTLRRISENPVFASGSEVKISR 307
Query: 316 GLTAKVI--DRTNNMTDVYLAFYDFSNILKP 344
+V+ R + +D+ L F +KP
Sbjct: 308 STVHRVVFLSRLLHRSDMLLQL-SFRVGVKP 337
>gi|237809709|ref|YP_002894149.1| squalene/phytoene synthase [Tolumonas auensis DSM 9187]
gi|237501970|gb|ACQ94563.1| Squalene/phytoene synthase [Tolumonas auensis DSM 9187]
Length = 343
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 134/307 (43%), Gaps = 40/307 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF----- 97
+L KVSR+FAL I QL L + V YL+ R DT+ED+ ++ + K + F
Sbjct: 9 LLAKVSRTFALTIPQLPAPLADWVGNAYLLCRIADTIEDEPALSCEEKASFIQLFLDVLS 68
Query: 98 --------HRHVYDREWHFSCGTK-EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMG 148
H + R S GT + L+ Q V + + Q + + M
Sbjct: 69 GTQPANQLHEQLSPR---LSSGTSLAEQELITQTVSVIAHYQQFPDDVQQILLRGVQIMS 125
Query: 149 AGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA------SGTEDLAPDSLS 198
GMA++ + +E D YCY VAG+VG L+ LF A + E+L +LS
Sbjct: 126 RGMARYQYLASPQGLEDQTALDHYCYAVAGVVGEMLTALFIAYRPALSANKEEL--RALS 183
Query: 199 NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLND 258
S GL LQ TNI++D +D + +WP+ + + + K + + +
Sbjct: 184 VSFGLGLQLTNILKDVWDDAR---RGVCWWPQTLIRQGIVWPPTDKQTLTASR-----KE 235
Query: 259 MVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV-VKMRR 315
+V A H+ D L Y AL + + +FC MA+ TL + + G VK+ R
Sbjct: 236 LVAIANGHLRDALDYTLALPAEEQGLRQFCLWALGMAVLTLQKIQRSDDYINGSNVKITR 295
Query: 316 GLTAKVI 322
+VI
Sbjct: 296 KDVRRVI 302
>gi|187918751|ref|YP_001887782.1| squalene/phytoene synthase [Burkholderia phytofirmans PsJN]
gi|187717189|gb|ACD18412.1| Squalene/phytoene synthase [Burkholderia phytofirmans PsJN]
Length = 388
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 33/274 (12%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I + ++
Sbjct: 42 PNPTRAFLLGPLLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLISPEQRL 101
Query: 92 PILIAFHRHV---------YDREWHFSCGTKEY---KVLMDQFHHVSTAFLELGKGYQDA 139
+L++ V + R G ++ KVL++ +L + + A
Sbjct: 102 ALLLSLRAQVNGATDDVALFQRMAAEVAGQQDQSDEKVLLESLGPALDVLSQLSESDRKA 161
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDYDE---YCYYVAGLVGLGLSKLFYA-- 186
+ +I + GM +F + ++ ++ +YDE Y Y VAG VG + + YA
Sbjct: 162 VREIVSTLTEGM-EFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHM 220
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT P++++ G LQ TN++RD +D+ I +C + P+ + +Y ++DL
Sbjct: 221 PGTLKERPETMARRGVRFGKALQMTNVLRDCGKDL-RIGRC--YLPQTLLDRYGLSVQDL 277
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
NS +A + +++ L H D L Y A+
Sbjct: 278 LVPANSVRARPLMLELLRTTLDHFRDALDYTLAI 311
>gi|110668279|ref|YP_658090.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
[Haloquadratum walsbyi DSM 16790]
gi|109626026|emb|CAJ52474.1| squalene synthase [Haloquadratum walsbyi DSM 16790]
Length = 357
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 139/339 (41%), Gaps = 36/339 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ + VSR+FAL + L + + +C+ YLV R DT+ED + I ++ + +L +
Sbjct: 17 WCHRSVQGVSRTFALTVDVLDEPMSSYICLGYLVCRIADTIEDASHISSETQAELLETYD 76
Query: 99 RHVYDREWHFSCGTKEYKV--------LMDQFHHVSTA------FLELGKGYQDAIEDIT 144
D E T V L D + V A F L Q AI
Sbjct: 77 -AALDPENEIDAATFASAVEPHLPTGELDDDWTVVRNAPRVLRTFGGLPDEVQRAIIPPA 135
Query: 145 KRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197
+ + GM F+ + +++ ++ +EYCYY AG VG ++ L L
Sbjct: 136 RELVQGMTTFVDRYSDTGGLRIQTREELEEYCYYAAGTVGNLITNLLTRGSVASERRQQL 195
Query: 198 ---SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
+ GL LQ N+ +D +D + + ++ P E + + L E+ A
Sbjct: 196 YETAEEFGLLLQLVNVSKDVYDDYTD--EDNIYLPAEWLADEDVPQDQLVNPEHEAGAAT 253
Query: 255 CLNDMVTNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTLALCYNNIE--VFRGV 310
+ + A ++D Y+ LRD AIP ++A+GTL + E +
Sbjct: 254 VVRRTASLAGSFLDDAETYLETIPLRDGNTLEAWAIPFLLAVGTLRELLSRPEDALSETD 313
Query: 311 VKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
VK+ R V++ + TD D N L+ +I +
Sbjct: 314 VKISREEVFAVVEEMSGTTD-----RDVLNRLRTRIAEE 347
>gi|295700322|ref|YP_003608215.1| squalene/phytoene synthase [Burkholderia sp. CCGE1002]
gi|295439535|gb|ADG18704.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1002]
Length = 403
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++
Sbjct: 57 PNPTRAFLLGPLLKGVSRSFYLTLRVLPIGMRDPIGLAYLLARAADTIADTSLIAPGQRL 116
Query: 92 PILIAFHRHV---------YDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDA 139
+L+A V + R E + K+L++ + +L + + A
Sbjct: 117 ELLLALRDQVNGVAVESAPFQRIAAEVAGQQAQSDEKLLLESLNPALDVLAQLSESDRHA 176
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDYDE---YCYYVAGLVGLGLSKLFYA-- 186
+ I + GM +F + ++ ++ +YDE Y Y VAG VG + + YA
Sbjct: 177 VRAIVTTLTEGM-EFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHM 235
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT PD++ G LQ TN++RD +D+ I +C + P+ + ++ DL
Sbjct: 236 PGTLKEQPDTMKQRGVRFGKALQMTNVLRDCGKDL-RIGRC--YLPQSMLERHALSARDL 292
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
S +A L +++ L H L Y A+ A+
Sbjct: 293 LQPAISIRARPLLIELLCKTLDHFRAALDYTLAIPASAV 331
>gi|399574848|ref|ZP_10768607.1| farnesyl-diphosphate farnesyltransferase [Halogranum salarium B-1]
gi|399240680|gb|EJN61605.1| farnesyl-diphosphate farnesyltransferase [Halogranum salarium B-1]
Length = 334
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 28/287 (9%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL----IAFHR 99
+ VSR+FAL + L + + +CI YLV R DTVED IP + +L A
Sbjct: 1 MQGVSRTFALTVDVLDEPMSSYICIGYLVCRIADTVEDAGHIPPAEQARVLRLYDAALDP 60
Query: 100 HVYDREWHFSCG---------TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
F+ T ++ V+++ V T F L ++A+ + + G
Sbjct: 61 DDDTDIDEFATAVDPFVPDEQTADWDVVVNAPRVVRT-FEALPDDVREAVTPPARELVQG 119
Query: 151 MAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNS 200
MA F+ + ++S ++ +EYCYY AG VG ++ L +D L +
Sbjct: 120 MAMFVERYADTDGLRIQSREELEEYCYYAAGTVGNLITNLVTRGDIDDERQRLLYDTAEE 179
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
GL LQ N+ +D D + + ++ P + + +++ + KA +
Sbjct: 180 FGLLLQLVNVAKDVHSDYED--ENNVYLPADWLADEGVPQDEIIDPRHETKAANVVTRTA 237
Query: 261 TNALMHVEDCLKYMSA--LRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
T+A ++D Y+ L D IP ++A+GTL N E
Sbjct: 238 THARSFLDDAQTYLETVPLTDGNTIAAWGIPYLLAVGTLRELLANPE 284
>gi|255022196|ref|ZP_05294198.1| squalene synthase [Acidithiobacillus caldus ATCC 51756]
gi|254968378|gb|EET25938.1| squalene synthase [Acidithiobacillus caldus ATCC 51756]
Length = 347
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 120/292 (41%), Gaps = 40/292 (13%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P AF L VSR+FAL I +L LR V YL+ R DT+EDD + K
Sbjct: 8 PALAFQERSLQAVSRTFALTIPRLPQGLREPVGNGYLLCRIADTIEDDPELSWSEKARWQ 67
Query: 95 IAFHRHVYDR--------------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
AF V R G +E V+ +F Q+A+
Sbjct: 68 EAFVAVVQGRAEPDAFARDFAAVLSPQMPAGERELIRNTPLVIQVTRSF---NATQQEAL 124
Query: 141 EDITKRMGAGMAKFICKEVES----IDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP-- 194
MG+GMAKF + + + D YCY VAG+VG L+ LF D P
Sbjct: 125 ARCVAIMGSGMAKFQEQASRAGLADLAALDSYCYVVAGVVGEMLTTLFI-----DYEPRL 179
Query: 195 -------DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
L+ G LQ TNI++D+ D + + PR++ +++ + L +
Sbjct: 180 VVREADMQRLAVRFGQGLQMTNILKDFWTDWE---RGVNWLPRDLLARHGVDVAALAPGQ 236
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSAL-RDHAIFR-FCAIPQIMAIGTL 297
++ L ++V A H++ L+Y + R+ R FC MA+ TL
Sbjct: 237 DNPAFQHALLELVAIAGRHLDAALRYTLMIPREQTGMRDFCLWAIAMAVLTL 288
>gi|385205858|ref|ZP_10032728.1| phytoene/squalene synthetase [Burkholderia sp. Ch1-1]
gi|385185749|gb|EIF35023.1| phytoene/squalene synthetase [Burkholderia sp. Ch1-1]
Length = 348
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++
Sbjct: 2 PNPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPQRRL 61
Query: 92 PILIAFHRHV---------YDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L++ V + R G + + KVL+ +L + ++A
Sbjct: 62 ALLLSLREQVNGATDDAALFQRMAAEVAGQQVQSDEKVLLKSLGPALDVLSQLSEFDREA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDYDE---YCYYVAGLVGLGLSKLFYA-- 186
+ +I + GM +F + ++ ++ +YDE Y Y VAG VG + + YA
Sbjct: 122 VREIVSTLTEGM-EFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT P+ ++ G LQ TN++RD +D+ I +C + P+ + +Y +DL
Sbjct: 181 PGTLKERPEIMARRGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPQTMLDRYGLSAQDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRFCAI-PQIMAIGTLALCY 301
NS +A + +++ + H + L Y A+ A+ R ++ P ++ + TL L
Sbjct: 238 LLPGNSVRARPLMIELLRKTVDHFREALDYTLAIPASAVRLRLASLWPILIGLETLILLV 297
Query: 302 NN 303
+N
Sbjct: 298 DN 299
>gi|340782984|ref|YP_004749591.1| squalene synthase [Acidithiobacillus caldus SM-1]
gi|340557135|gb|AEK58889.1| squalene synthase [Acidithiobacillus caldus SM-1]
Length = 366
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 120/292 (41%), Gaps = 40/292 (13%)
Query: 35 PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL 94
P AF L VSR+FAL I +L LR V YL+ R DT+EDD + K
Sbjct: 27 PALAFQERSLQAVSRTFALTIPRLPQGLREPVGNGYLLCRIADTIEDDPELSWSEKARWQ 86
Query: 95 IAFHRHVYDR--------------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
AF V R G +E V+ +F Q+A+
Sbjct: 87 EAFVAVVQGRAEPDAFARDFAAVLSPQMPAGERELIRNTPLVIQVTRSF---NATQQEAL 143
Query: 141 EDITKRMGAGMAKFICKEVES----IDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP-- 194
MG+GMAKF + + + D YCY VAG+VG L+ LF D P
Sbjct: 144 ARCVAIMGSGMAKFQEQASRAGLADLAALDSYCYVVAGVVGEMLTTLFI-----DYEPRL 198
Query: 195 -------DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
L+ G LQ TNI++D+ D + + PR++ +++ + L +
Sbjct: 199 VVREADMQRLAVRFGQGLQMTNILKDFWTDWE---RGVNWLPRDLLARHGVDVAALAPGQ 255
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSAL-RDHAIFR-FCAIPQIMAIGTL 297
++ L ++V A H++ L+Y + R+ R FC MA+ TL
Sbjct: 256 DNPAFQHALLELVAIAGRHLDAALRYTLMIPREQTGMRDFCLWAIAMAVLTL 307
>gi|444721054|gb|ELW61808.1| Squalene synthase [Tupaia chinensis]
Length = 105
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 4 LAAVLRHPDDLYPLLKLKMASR----QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLG 59
L L HP++ Y L + ++ + + Q CY L++ SRSF V+Q +G
Sbjct: 3 LVRCLGHPEEFYNLFRFRIGGKWKVIAKKDQDSLSSSLETCYQYLNQASRSFTAVVQTIG 62
Query: 60 TDLRNAVCIFYLVLRALDTVEDDTSI 85
T++R+AVCIFYLVLRALDT+EDD +I
Sbjct: 63 TEIRHAVCIFYLVLRALDTLEDDMTI 88
>gi|292491410|ref|YP_003526849.1| Squalene/phytoene synthase [Nitrosococcus halophilus Nc4]
gi|291580005|gb|ADE14462.1| Squalene/phytoene synthase [Nitrosococcus halophilus Nc4]
Length = 366
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 125/290 (43%), Gaps = 38/290 (13%)
Query: 40 CYSM--------LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVK- 90
CYS+ L VSR+FAL I QL L+ V YL+ R DT+ED+ S+ D K
Sbjct: 9 CYSIDKAYQDYILPGVSRTFALTIPQLPPKLQEVVANGYLLCRIADTIEDEPSLSIDQKK 68
Query: 91 ------VPILIA------FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQD 138
+ ++ F R +Y + T+ + L+ + +
Sbjct: 69 FFSNTFIAVVAGQASAKFFARALYPLLSEHTLATE--RELIQNTPRIIRITHSFTPRQRA 126
Query: 139 AIEDITKRMGAGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLF--YASGT--E 190
A+E + M GM +F + + ++ D YCY+VAG+VG L++LF Y+ G
Sbjct: 127 ALERCVRIMCDGMPRFQNTASLRGLADMETMDRYCYFVAGVVGEMLTELFCDYSPGANRN 186
Query: 191 DLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKYVNKLEDLKYEENS 249
A SL S G LQ TNI++D +D K + W PR I+ + L+ L
Sbjct: 187 REALHSLMISFGQGLQMTNILKDIWDD----RKREICWLPRSIFEQTGFDLDKLTPGHYQ 242
Query: 250 DKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTL 297
L ++ A H+ + L Y + + I RFC MAI TL
Sbjct: 243 PAFGDGLQHLIGIAHAHLRNALTYTLLIPPNEVGIRRFCLWAIGMAILTL 292
>gi|220910176|ref|YP_002485487.1| squalene/phytoene synthase [Cyanothece sp. PCC 7425]
gi|219866787|gb|ACL47126.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7425]
Length = 360
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 24/306 (7%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV----PIL 94
FC +L +VSR+FAL I+ L +L AV YL+ R DT+EDD + K+ +L
Sbjct: 19 FCQEILPEVSRTFALSIRFLPGNLGRAVLCAYLLCRIADTIEDDPVATVETKIFLLDLLL 78
Query: 95 IAFHRHV----YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
F V Y +E G + L+ V F L Q + M G
Sbjct: 79 DCFDSPVDANAYPKEAENVQGEAAHLRLVQHTDLVFALFRTLPPSTQHHVYRWVSEMVHG 138
Query: 151 MAKFICK-----EVESIDDYDEYCYYVAGLVGLGLSKLF--YASGTEDLAPDSLSNSMGL 203
M KF+ ++++ +Y EYCYYVAG VG L+ L+ ++ D L
Sbjct: 139 MKKFVALHPQGIRIQTLPEYKEYCYYVAGTVGYLLTDLWHEHSPSIGDGEYKVLLQRCAA 198
Query: 204 F---LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
F LQ NI++D D + ++ P++ + + + L + + + ++V
Sbjct: 199 FGEALQTVNILKDIAWDAEH--ENSIYVPQKSLLEQGSSHQLLLSPAHLGQNHAAIKELV 256
Query: 261 TNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTLALCYNNIEVFR--GVVKMRRG 316
A +++ L+Y+ ++ A I FC +P + A TL + + G VK+ R
Sbjct: 257 QLAWNDLDEALEYLLSIPKAAVPIRMFCVLPLLFAYATLRELTQTTAMLQPGGSVKISRS 316
Query: 317 LTAKVI 322
+I
Sbjct: 317 EVKSLI 322
>gi|313126841|ref|YP_004037111.1| farnesyl-diphosphate farnesyltransferase [Halogeometricum
borinquense DSM 11551]
gi|448288693|ref|ZP_21479891.1| farnesyl-diphosphate farnesyltransferase [Halogeometricum
borinquense DSM 11551]
gi|312293206|gb|ADQ67666.1| farnesyl-diphosphate farnesyltransferase [Halogeometricum
borinquense DSM 11551]
gi|445569078|gb|ELY23653.1| farnesyl-diphosphate farnesyltransferase [Halogeometricum
borinquense DSM 11551]
Length = 356
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF- 97
+C+ + VSR+FAL + L + + +C+ YLV R DTVED + I + +L +
Sbjct: 17 WCHEAVQGVSRTFALTVDVLDEPMSSYICVGYLVCRIADTVEDASRISPPEQADLLRTYD 76
Query: 98 -----------HRHVYDREWHFSCG-TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
V E H +++V+ D + T F L + ++A+ +
Sbjct: 77 AVLDPDNDTTVEEFVTAVEPHLPEEMNDDWRVVRDAPRVIRT-FEHLPEDVRNAVTPPAR 135
Query: 146 RMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD--- 195
+ GMA F+ + ++S ++ +EYCYY AG VG ++ L D++ D
Sbjct: 136 ELVQGMALFVERYDDTGGLRIQSREELEEYCYYAAGTVGNLITNLVTRG---DISADRRR 192
Query: 196 ---SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
+ GL LQ NI +D +D + ++ P E + +++ E+ + A
Sbjct: 193 QLYDTAEQFGLLLQLVNISKDVYDDYTA--ENNVYLPAEWLAAEGVPQDEVVAPEHEEAA 250
Query: 253 VQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTL 297
+ +A ++D Y+ + D A+P ++++GTL
Sbjct: 251 SSVVRRTAEHAASFLDDAQTYLETVPATDGNTLAAWAVPFLLSVGTL 297
>gi|320033420|gb|EFW15368.1| squalene synthetase [Coccidioides posadasii str. Silveira]
Length = 197
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 41 YSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH 100
Y L SRSF V Q+L +L V +FYLVLR+LDT+EDD +I + K P+L F+
Sbjct: 76 YRFLALTSRSFVAVCQELHPELLLPVVVFYLVLRSLDTIEDDMTIGIEEKEPLLRNFYTR 135
Query: 101 VYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF 154
+ + W F S ++ + + +F V+ F L Y+ I+DI K MG GMA +
Sbjct: 136 IDEENWAFDGSGPDEKDREALVKFDCVAREFNLLKDEYRAIIKDIAKGMGNGMADY 191
>gi|323143189|ref|ZP_08077885.1| phytoene/squalene synthetase [Succinatimonas hippei YIT 12066]
gi|322417030|gb|EFY07668.1| phytoene/squalene synthetase [Succinatimonas hippei YIT 12066]
Length = 341
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 53/288 (18%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY- 102
L KVSR+FAL I L DLR+ V YL+ R DT+EDD K+ L F +
Sbjct: 16 LQKVSRTFALTIPLLPPDLRDYVGNAYLLCRIADTLEDDPKADAVQKIVWLKDFAFLAFN 75
Query: 103 ---DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIE-------------DITKR 146
+ S K ++ D A LE D IE DI R
Sbjct: 76 GFQNEALLISLRDKALLLVKDGAKEAEYALLE------DMIEVINRTLSFPRMQIDILSR 129
Query: 147 ----MGAGMAKFICK-EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP--DSLSN 199
+ +GMA I + ++ S DD D+YCY VAG+VG L+ LF+ + +P D ++
Sbjct: 130 GVGVLASGMADKIAETKINSEDDVDDYCYMVAGVVGELLASLFFNITVKSSSPRMDVMAK 189
Query: 200 --SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
S G LQ TNI++D ED + F PR ED + +E ++
Sbjct: 190 AVSFGEGLQLTNILKDRYEDST---RNVSFLPRVA--------EDKRKDE--------ID 230
Query: 258 DMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNN 303
+ + H++D L ++ ++ ++ I FC MAI TL N
Sbjct: 231 FYIKKTMGHLDDALDFVLSVPAKEKGIRLFCYFNVAMAIMTLKKIAKN 278
>gi|340354552|ref|ZP_08677255.1| squalene/phytoene synthase [Sporosarcina newyorkensis 2681]
gi|339623221|gb|EGQ27725.1| squalene/phytoene synthase [Sporosarcina newyorkensis 2681]
Length = 278
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 44/269 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I+ L ++R AV YL +RA+D +ED + V +L +
Sbjct: 14 VLKETSRTFFIPIKLLEPEVREAVASAYLCMRAIDEIEDHEQMDVADVVTLLNKVSELLE 73
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIE-----------DITKRMGAGM 151
++ + G + L F + E+ D +E + T MG GM
Sbjct: 74 NK---IATGAPIAEALDKLFAPYQSQLPEVTLRLADWVEFCPDTVTDKVLESTAIMGRGM 130
Query: 152 AKFICKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKT 208
AK+ K+ + + +D D+Y YYVAGLVG+ L+ ++ + GTE L+ G LQ
Sbjct: 131 AKWAEKDWVIHTREDLDDYTYYVAGLVGVMLTDIWRWYDGTE--TDRDLAIGFGRGLQSV 188
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NI+R+Y ED + F+P + W L++M + A ++
Sbjct: 189 NILRNYKEDAE---RDVNFFP-DGWK---------------------LDEMFSFAEENLA 223
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
+Y+ + I FC IP +A GTL
Sbjct: 224 LADEYIQDIETKTILNFCKIPLALAHGTL 252
>gi|456012052|gb|EMF45772.1| Pro-zeta-carotene desaturase, prolycopene producing [Planococcus
halocryophilus Or1]
Length = 276
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
ML + SR+F + I L L+ V YL +RA+D +ED + K+ +L + +
Sbjct: 14 MLKETSRTFFIPISFLDPILKKTVGSAYLCMRAIDEIEDHPKLDDQAKIKLLSTIQKMLE 73
Query: 102 --YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE- 158
+D + + T + L ++ + + + + T M GM+K++ K
Sbjct: 74 TGFDEQSYLDLVTPYKEFLPPVTMRLADWIHVCPEEIRGKVMESTAIMAGGMSKWVEKNW 133
Query: 159 -VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 217
+ + +D DEY YYVAGLVG LS ++Y PD + + G LQ N++R+Y ED
Sbjct: 134 VILTKEDLDEYTYYVAGLVGTMLSDIWYWHDGTVTDPDH-AIAFGRGLQAVNMLRNYDED 192
Query: 218 INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
+ F P E W++ DM A ++ Y+ +
Sbjct: 193 FE---RGVTFVP-EGWTR---------------------EDMFNYAKNNLAKADLYVKPI 227
Query: 278 RDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRGLTAKVIDR 324
++ I FC +P LAL ++ ++ + G KM R ++++
Sbjct: 228 KNKRILMFCKVP-------LALAHSTLKALKSGKEKMSRVEVEGIVEQ 268
>gi|300113881|ref|YP_003760456.1| squalene/phytoene synthase [Nitrosococcus watsonii C-113]
gi|299539818|gb|ADJ28135.1| Squalene/phytoene synthase [Nitrosococcus watsonii C-113]
Length = 366
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 135/308 (43%), Gaps = 36/308 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL + L+ V YL+ R DT+ED+ ++ T K F V
Sbjct: 20 ILPGVSRTFALTIPQLPSPLQEVVANGYLLCRIADTIEDEPTLSTTQKKNFSNDFVTVVA 79
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKG--------------YQDAIEDITKRMG 148
+ + Y +L + H A EL + + A+E + M
Sbjct: 80 GQSSAEAFAHALYPLLSE---HTLAAERELIRNTPRIIRITHSFNSRQRAALERCVRIMC 136
Query: 149 AGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLF--YASGTEDLAPDSLSN--- 199
GM F + + ++ D YCY+VAG+VG L++LF Y+ G + ++L N
Sbjct: 137 DGMPHFQNTASLRGLADMEAMDRYCYFVAGVVGEMLTELFCDYSPGI-NRNREALRNLMV 195
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKYVNKLEDLKYEENSDKAVQCLND 258
S G LQ TNI++D +D K R+ W PR I+ + L++L+ L
Sbjct: 196 SFGQGLQMTNILKDIWDD----RKRRICWLPRTIFEQAGFNLDNLQPGHYQSTFGDGLQH 251
Query: 259 MVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCY--NNIEVFRGVVKMR 314
++ H+ + L Y + + I RFC +A+ TL + N R V R
Sbjct: 252 LIGITHAHLRNALTYTLLIPPEEGGIRRFCLWAIGLAMLTLRKLHRRRNFSASREVKISR 311
Query: 315 RGLTAKVI 322
R + A ++
Sbjct: 312 RSVKATIL 319
>gi|448311067|ref|ZP_21500843.1| squalene/phytoene synthase [Natronolimnobius innermongolicus JCM
12255]
gi|445606759|gb|ELY60662.1| squalene/phytoene synthase [Natronolimnobius innermongolicus JCM
12255]
Length = 312
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 33/280 (11%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG-------------- 111
+C+ YL+ R DT+ED IP + + +L A+ R + D S
Sbjct: 5 ICVGYLLCRVADTIEDAGHIPPETQTELLTAYDR-LLDPATDASVDAFMDDVEPWLPEPE 63
Query: 112 --TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESI 162
T +++V+ + + T F L + ++ + + + + GMA F + ++++
Sbjct: 64 ERTDDWEVVAETPRILRT-FESLDEEPREIMREPVRELVDGMAMFTDRYADEGGLRLQTV 122
Query: 163 DDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN--SMGLFLQKTNIIRDYLEDINE 220
D+ +EYC+Y AG VG ++ L + D A + N S L LQ NI +D D +E
Sbjct: 123 DELEEYCWYAAGTVGTLITGLVSRGVSNDRAEEMRENARSFALLLQLVNIAKDVETDYHE 182
Query: 221 IPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRD- 279
+ ++ P E + LE++ E N + + + A +++D +Y+ + +
Sbjct: 183 --ENNVYLPAEWLEEEDVALENVTDERNHGGVTNVIKRVTSRAETYLDDAQRYLEVVPES 240
Query: 280 HA-IFRFCAIPQIMAIGTLALCYNNIE--VFRGVVKMRRG 316
H AIP ++A+GT+ E V G VK+ R
Sbjct: 241 HGNTLSAWAIPYLLAVGTMRELRERPEDVVREGNVKISRA 280
>gi|407478128|ref|YP_006792005.1| squalene/phytoene synthase [Exiguobacterium antarcticum B7]
gi|407062207|gb|AFS71397.1| Squalene/phytoene synthase [Exiguobacterium antarcticum B7]
Length = 274
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 56/295 (18%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL---IAFHR 99
+L SR+F + I +L +L+ AV YL +RA+D +ED + TD+K +L R
Sbjct: 14 VLKATSRTFYIPISRLSQELQEAVGAAYLCMRAIDEIEDHEELSTDIKTTLLRETALLMR 73
Query: 100 HVYDREWHFSCGTKEYKVLM----DQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGM 151
+ E Y+ L+ +Q V+ E G + + + T M GM
Sbjct: 74 GTFSDE--------TYRTLIAPYANQLPEVTRRLPEWIAYCPVGIRSKVLESTAEMAEGM 125
Query: 152 AKFICKE--VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTN 209
A + ++ V++ D DEY YYVAGLVG+ LS ++Y + + G LQ N
Sbjct: 126 AVWAERDWTVKTAADLDEYTYYVAGLVGVMLSDIWYWKAG-IVTDKQQAIGFGRGLQAVN 184
Query: 210 IIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
I+R+ ED F P W+ M A ++ +
Sbjct: 185 ILRNQQEDAER--GVGYFPPG--WTT---------------------ETMFDYARENLAE 219
Query: 270 CLKYMSAL-RDHAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRRGLTAKVI 322
Y++++ + I+ FC IP +A GTL AL RG K+ R K++
Sbjct: 220 ADAYLASIPKQTTIYEFCKIPLALAHGTLDALA-------RGKEKLSRPEVLKIV 267
>gi|350543994|ref|ZP_08913662.1| Phytoene synthase [Candidatus Burkholderia kirkii UZHbot1]
gi|350528228|emb|CCD36185.1| Phytoene synthase [Candidatus Burkholderia kirkii UZHbot1]
Length = 353
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++ +L++ V
Sbjct: 13 LLKSVSRSFYLTLRILPAGMRDPIGLAYLLARAADTIADTSLISPQRRLELLLSLRAQVN 72
Query: 103 D-----------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
E + + L++ +L Q A+ DI + GM
Sbjct: 73 GVRNDGALARIVGEVAGQQAQPDERTLLESLGAALAILPQLSSEDQAAVRDIVTTLTTGM 132
Query: 152 -------AKFICKEVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDS--- 196
+ E+ ++ ++ D Y Y VAG VG +K+ YA GT APD+
Sbjct: 133 EFDLRTFSDETSGEIVALKEFGELDRYTYLVAGCVGEFWTKMTYAHMPGTLKAAPDTMLA 192
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
L G LQ TN++RD D+ I +C + P + +++ +DL S +A L
Sbjct: 193 LGVRFGRALQMTNVLRDCARDL-RIGRC--YLPESMLARHGLTPKDLLQPATSARARPVL 249
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
+++ ++ +D + Y A+ A+ R C P ++ + TL L N
Sbjct: 250 FELLGKSIALYQDAIDYTLAIPSSAVRLRLACLWPIMIGLDTLVLLSRN 298
>gi|393201365|ref|YP_006463207.1| phytoene/squalene synthetase [Solibacillus silvestris StLB046]
gi|406665607|ref|ZP_11073379.1| farnesyl-diphosphate farnesyltransferase [Bacillus isronensis
B3W22]
gi|327440696|dbj|BAK17061.1| phytoene/squalene synthetase [Solibacillus silvestris StLB046]
gi|405386472|gb|EKB45899.1| farnesyl-diphosphate farnesyltransferase [Bacillus isronensis
B3W22]
Length = 273
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 51/287 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA----FH 98
+L + SR+F + I L +L+ V YL +RA+D +ED + ++K L+
Sbjct: 13 VLKETSRTFFIPITFLDKELKLTVASAYLAMRAIDEIEDHEDVSNEMKNATLLKVAELLK 72
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVS---TAFLEL-GKGYQDAIEDITKRMGAGMAKF 154
V+D + + D+ V+ +LE+ +G + T M GMAK+
Sbjct: 73 ASVFDNNAYLDA----LAPIKDKMPEVTLRLADWLEVCPQGAFSIVTSATSEMAEGMAKW 128
Query: 155 ICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+V + +D D+Y YYVAGLVG+ LS+L+ +++GT+ L+ G LQ NI+
Sbjct: 129 ALANWQVHTKEDLDDYTYYVAGLVGVMLSELWEWSAGTK--TDRELAIGYGRGLQAVNIL 186
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKY-EENSDKAVQCLNDMVTNALMHVEDC 270
R+ ED++E + F P + W++ E Y EEN KA D+
Sbjct: 187 RNEQEDLDE--RGVSFVP-DGWTRA----ELFAYAEENLAKA-----DL----------- 223
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRG 316
YM L +I FC +P LAL + ++ + G KM R
Sbjct: 224 --YMKDLDKRSIKLFCRLP-------LALAHKTLQAMKEGREKMSRS 261
>gi|392972323|ref|ZP_10337715.1| putative uncharacterized protein [Staphylococcus equorum subsp.
equorum Mu2]
gi|403046349|ref|ZP_10901820.1| hypothetical protein SOJ_14290 [Staphylococcus sp. OJ82]
gi|392510036|emb|CCI61018.1| putative uncharacterized protein [Staphylococcus equorum subsp.
equorum Mu2]
gi|402763849|gb|EJX17940.1| hypothetical protein SOJ_14290 [Staphylococcus sp. OJ82]
Length = 272
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 28 EKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPT 87
EK+ P + +L + SR+F + I L +L+++V YL+LRA+D +ED +
Sbjct: 3 EKKFPKD-----AMRVLKETSRTFYIPITFLEKELKHSVASAYLILRAIDEIEDHEEVDN 57
Query: 88 DVKVPILI---AFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDIT 144
D+K IL+ + +D E + ++ + +S + D +
Sbjct: 58 DLKYTILMQVSELFKEPFDEEKYLEILGPVKDIMPEVTLRLSEWIDACPDRTLPIVLDCS 117
Query: 145 KRMGAGMAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMG 202
M GMAK+ +V + +D DEY YYVAG VG+ LS+L+ E D L+ G
Sbjct: 118 SEMAFGMAKWAKANWDVHTREDLDEYTYYVAGRVGVMLSELWELCAGEKTDRD-LAIGYG 176
Query: 203 LFLQKTNIIRDYLEDINE 220
LQ NI+R+ ED+ E
Sbjct: 177 RGLQAVNILRNEKEDLGE 194
>gi|91779604|ref|YP_554812.1| farnesyl-diphosphate farnesyltransferase [Burkholderia xenovorans
LB400]
gi|91692264|gb|ABE35462.1| farnesyl-diphosphate farnesyltransferase [Burkholderia xenovorans
LB400]
Length = 348
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++
Sbjct: 2 PNPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPQRRL 61
Query: 92 PILIAFHRHV---------YDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L++ V + R G + + KVL++ +L + + A
Sbjct: 62 TLLLSLREQVNGATDDAALFQRMAAEVAGQQVQSDEKVLLESLGPALDVLSQLNEFDRKA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDYDE---YCYYVAGLVGLGLSKLFYA-- 186
+ +I + GM +F + ++ ++ +YDE Y Y VAG VG + + YA
Sbjct: 122 VREIVSTLTEGM-EFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT D ++ G LQ TN++RD +D+ I +C + P+ + +Y +DL
Sbjct: 181 PGTLKERADVMARRGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPQTMLDRYGLSPQDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRFCAI-PQIMAIGTLALCY 301
+NS +A + +++ + H + L Y A+ A+ R ++ P ++ + TL L
Sbjct: 238 LRPDNSVRARPLMIELLRKTVDHFREALDYTLAIPASAVRLRLASLWPILIGLETLILLA 297
Query: 302 NN 303
+N
Sbjct: 298 DN 299
>gi|323490544|ref|ZP_08095750.1| squalene/phytoene synthase [Planococcus donghaensis MPA1U2]
gi|323395810|gb|EGA88650.1| squalene/phytoene synthase [Planococcus donghaensis MPA1U2]
Length = 276
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 77/307 (25%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML + SR+F + I L L+ V YL +RA+D +ED + K+ +L
Sbjct: 14 MLKETSRTFFIPISFLEPTLKKTVGSAYLCMRAIDEIEDHPELDDQAKIKLLSTIQT--- 70
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR---------------- 146
M + + A+LEL YQ + +T R
Sbjct: 71 ----------------MLETNFDEDAYLELVTPYQAFLPPVTMRLADWIHVCPEEIRGKV 114
Query: 147 ------MGAGMAKFICKE--VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198
M GM+K++ K +++ +D DEY YYVAGLVG LS +++ PD +
Sbjct: 115 IESTAIMAGGMSKWVEKNWVIQTKEDLDEYTYYVAGLVGTMLSDIWHWHDGTVTDPDH-A 173
Query: 199 NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLND 258
+ G LQ N++R+Y ED + F P E W++ D
Sbjct: 174 IAFGRGLQAVNMLRNYDEDFE---RGVTFVP-EGWTR---------------------ED 208
Query: 259 MVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRRGL 317
M A ++ Y+ +++ I FC +P LAL ++ ++ + G KM R
Sbjct: 209 MFNYAKNNLAKADLYVKPIKNKRILMFCKVP-------LALAHSTLKALKSGKEKMSRVE 261
Query: 318 TAKVIDR 324
++++
Sbjct: 262 VEGIVEQ 268
>gi|374852655|dbj|BAL55583.1| squalene synthase [uncultured gamma proteobacterium]
Length = 364
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
AF L VSR+FAL I +L + + YL+ R +DT+ED+ ++ K F
Sbjct: 19 AFQARFLDGVSRTFALTIPRLPEPVHQVIANGYLLCRIVDTIEDEATLDRAAKRRFCERF 78
Query: 98 HRHVYDRE----------WHFSCGTK-EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
V R+ S T + L+ V + ++A+
Sbjct: 79 VEVVQGRQNAAEFAQEFAARLSNRTPLAERELIQAIPRVIAITHKFSPADREALARCVAI 138
Query: 147 MGAGMAKFICKEVE----SIDDYDEYCYYVAGLVGLGLSKLF------YASGTEDLAPDS 196
M GMA F +++ ++ D + YCYYVAG+VG L+++F A E L
Sbjct: 139 MSHGMADFQDQDLRAGLATLADLNRYCYYVAGVVGEMLTQVFCHHFPAMAKHEERLL--E 196
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
L+ S G LQ TNI++D +D E C + PR+I+ + +L +L+ V L
Sbjct: 197 LAVSFGQGLQMTNILKDMWDD-RERGVC--WLPRDIFLAHGYELNNLRPGHRDPAFVAGL 253
Query: 257 NDMVTNALMHVEDCLKYM-------SALRDHAIFRFCAIPQIMAIGTL 297
+++ A H+ + L+Y + LRD FC MAI TL
Sbjct: 254 RELIAIAHGHLRNALEYTLLIPNSETGLRD-----FCLWALGMAILTL 296
>gi|383453790|ref|YP_005367779.1| phytoene synthase [Corallococcus coralloides DSM 2259]
gi|380732432|gb|AFE08434.1| Phytoene synthase [Corallococcus coralloides DSM 2259]
Length = 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 128/322 (39%), Gaps = 39/322 (12%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
+FC + L +VSR+FAL I L L AV + YL+ R DT+ED+ P + +L
Sbjct: 7 SFCRTQLPRVSRTFALNIPLLPEPLDLAVTVAYLLCRIADTLEDEA--PGALHGALLDEL 64
Query: 98 HRHV-YDREWHFSC--------------GTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
V + W L+ + V L I
Sbjct: 65 GGLVSLEPGWEARARSFARRARLALRDEAPPAEAELVSETPTVLETLASLPSWVHPPIAR 124
Query: 143 ITKRMGAGMAKFI-----CKEVESIDDYDE---YCYYVAGLVGLGLSKLFYASGT----- 189
+ M GM + +V + D YCYYVAG+VG L+ LF AS
Sbjct: 125 CVRTMAGGMNQIQRMHGGSGQVMGLPDLQATFMYCYYVAGVVGEMLTGLFVASSPRVAWR 184
Query: 190 -EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
E L S + + G LQ TNI++D ED++ + + PR+ + + L
Sbjct: 185 EERLM--SRAPAFGRALQLTNILKDVREDLD---RGSCWLPRDRMAAHGLTPATLALPSL 239
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEV 306
AV L+++V A ++ L+Y AL + + FC P A TL + N V
Sbjct: 240 RANAVALLDELVAVARRELDVALEYSLALPVEEPGLRLFCLYPLFFAAATLDVVEGNPAV 299
Query: 307 FRG-VVKMRRGLTAKVIDRTNN 327
F VK+ R A ++ T
Sbjct: 300 FEPEPVKIPRETVAMLMQLTQE 321
>gi|408356733|ref|YP_006845264.1| hypothetical protein AXY_13700 [Amphibacillus xylanus NBRC 15112]
gi|407727504|dbj|BAM47502.1| hypothetical protein AXY_13700 [Amphibacillus xylanus NBRC 15112]
Length = 273
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 33 PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVP 92
P+ + +L SR+F + I L L+ V YL +RA+D +ED + DVK
Sbjct: 5 PKKLYQDALRVLKDTSRTFYIPITLLKPKLKKTVASAYLCMRAIDEIEDHEELSIDVKSC 64
Query: 93 ILIAFHRHVYDREWHFSCGTKEYKVLMDQFH-HVSTAFLELGKGYQDAIEDI-------T 144
+L + E HFS Y+ L+ +H + + L D+ T
Sbjct: 65 LLTRISHML---ESHFS--RSGYQELIQPYHDKLPEVTIRLADWLDFCPNDVVGKVMHYT 119
Query: 145 KRMGAGMAKFICKEVESI--DDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS-LSNSM 201
M GMAK+ + + I +D+D+Y +YVAGLVG+ LS+++ +D+ D L+
Sbjct: 120 GVMANGMAKWAKRNWDIITKEDFDDYTFYVAGLVGVMLSEIW--QWYDDVKTDQDLAIGF 177
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
G LQ NI+R+ ED + + F P + W++ D+
Sbjct: 178 GRALQCVNILRNQDEDYD---RGVNFLPND-WTR---------------------GDLFN 212
Query: 262 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
A +++ +Y+ L ++ I FC IP +A TL++ N E
Sbjct: 213 YADQNLQLAKQYIETLTNNNIKIFCLIPYKLADKTLSVMKNGRE 256
>gi|261407306|ref|YP_003243547.1| Squalene/phytoene synthase [Paenibacillus sp. Y412MC10]
gi|261283769|gb|ACX65740.1| Squalene/phytoene synthase [Paenibacillus sp. Y412MC10]
Length = 275
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 62/303 (20%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML K SR+F + I L L+ AV YL +RA+D +ED + ++KV +L+ H ++
Sbjct: 17 MLKKTSRTFYIPISYLELGLKEAVTSAYLCMRAIDEIEDHKELADELKVKLLLGIH-DIF 75
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED-----------ITKRMGAGM 151
E ++ Q H+ + + E+ I+D I R A M
Sbjct: 76 KSE----------DTMVTQTQHLLSPYQEILPDVTMQIDDWALLCPSSGAPIVNRYIAKM 125
Query: 152 AKFICKEVESI------DDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLF 204
+ + + V+S +D D Y Y VAG+VG LS+L+ + GT+ + +++ G
Sbjct: 126 SLHMAQWVQSGWNIHTEEDLDRYTYSVAGMVGEMLSELWLWHDGTQSDSTKAIAFGRG-- 183
Query: 205 LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNAL 264
LQ NI+R+ ED++ + F+P + W +M
Sbjct: 184 LQAVNILRNREEDLH---RGVDFYP-DGWG---------------------FKEMQQYTR 218
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
+++ Y++ L+D +FC IP +A T+ L + G K+ R K+++R
Sbjct: 219 RNLQIADSYIADLKDGPALKFCKIPLSLAHATVNL------ISAGGSKLTRDAVLKIVNR 272
Query: 325 TNN 327
Sbjct: 273 VTG 275
>gi|323528874|ref|YP_004231026.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1001]
gi|323385876|gb|ADX57966.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1001]
Length = 348
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 33/274 (12%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++
Sbjct: 2 PTPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPGQRL 61
Query: 92 PIL---------IAFHRHVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L +A ++ R G + + KVL++ +L + + A
Sbjct: 62 QLLLSLRDQVNGVASDGALFQRMAAEVAGQQSQSDEKVLLESLGPALQVLAQLSESDRKA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA-- 186
+ +I + GM +F + + ++ +Y D Y Y VAG VG + + YA
Sbjct: 122 VREIVSTLTEGM-EFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTAMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT PD ++ G LQ TN++RD D+ I +C + P+ + ++ +DL
Sbjct: 181 PGTLKERPDIMATRGVRFGKALQMTNVLRDCGRDLR-IGRC--YLPQSMLEQHGLSPQDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
NS +A + +++ N L H + L Y A+
Sbjct: 238 LLPANSLRARPLMIELLRNTLDHFREALDYTLAI 271
>gi|427711641|ref|YP_007060265.1| phytoene/squalene synthetase [Synechococcus sp. PCC 6312]
gi|427375770|gb|AFY59722.1| phytoene/squalene synthetase [Synechococcus sp. PCC 6312]
Length = 352
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
FC +L +VSR+FAL I+ L L AV I YL+ R DTVEDD K +L
Sbjct: 18 FCQEILPEVSRTFALSIRFLPGTLGRAVLIAYLICRIADTVEDDPVASIATKTLLLDDLL 77
Query: 99 RHV--------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
Y R G + L+ V T F L Q ++ M G
Sbjct: 78 ECFDSSRLADDYGRIAQNLEGEAAHIRLVANTGLVFTLFRTLPLTSQQHVQRWVSEMVHG 137
Query: 151 MAKFI-----CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS------N 199
M KF+ ++++D+Y EYCYYVAG VG L+ L++ + + D
Sbjct: 138 MKKFVNLYPTGIRIKTLDEYKEYCYYVAGTVGYLLTDLWH-EHSFSIGQDEYQVLLKRCG 196
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
+ G LQ NI++D D + ++ P + + + L E + ++
Sbjct: 197 AFGEALQTVNILKDIAWDAEH--ENSIYIPEQSLVAQGSGHQLLLKPELKANNHAAIKEL 254
Query: 260 VTNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTL 297
V A +++ +Y+ ++ A I FC +P + A TL
Sbjct: 255 VALAWHDLDEAQEYLLSVPKAAVPIRLFCVLPLLFAYATL 294
>gi|407709712|ref|YP_006793576.1| farnesyl-diphosphate farnesyltransferase [Burkholderia
phenoliruptrix BR3459a]
gi|407238395|gb|AFT88593.1| farnesyl-diphosphate farnesyltransferase [Burkholderia
phenoliruptrix BR3459a]
Length = 348
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++
Sbjct: 2 PTPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPGQRL 61
Query: 92 PIL---------IAFHRHVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L +A ++ R G + + KVL++ +L + + A
Sbjct: 62 QLLLSLRDQVNGVASDGALFQRMAAEVAGQQSQSDEKVLLESLGPALQVLAQLSESDRKA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA-- 186
+ +I + GM +F + + ++ +Y D Y Y VAG VG + + YA
Sbjct: 122 VREIVSTLTEGM-EFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTAMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT PD ++ G LQ TN++RD +D+ I +C + P+ + ++ +DL
Sbjct: 181 PGTLKERPDIMATRGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPQSMLEQHGLSPQDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
NS +A + +++ N L H + L Y A+
Sbjct: 238 LLPANSLRARPLMIELLRNTLDHFREGLDYTLAI 271
>gi|343475250|emb|CCD13301.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 153
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 259 MVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLT 318
MV +AL H+ ++Y+S LRD IF FCAIPQ+MAI TL+L ++N +VF VK+ RG T
Sbjct: 1 MVADALEHLPHVIEYLSNLRDSTIFAFCAIPQVMAIATLSLVFDNGDVFHTKVKLTRGAT 60
Query: 319 AKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNAT--KTLSRVEAIQKACMDSGVLNKR 376
+I + + + + +++ P A + +++ A A MD L ++
Sbjct: 61 CAIIYGSTELQSALRLARAYG---RQVLHRTRPGAEGHEAVAQSVAAALATMDGVALQQK 117
Query: 377 FKI 379
+
Sbjct: 118 VAV 120
>gi|329926501|ref|ZP_08280915.1| phytoene/squalene synthetase [Paenibacillus sp. HGF5]
gi|328939236|gb|EGG35598.1| phytoene/squalene synthetase [Paenibacillus sp. HGF5]
Length = 275
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 62/303 (20%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML K SR+F + I L L+ AV YL +RA+D +ED + +VKV +L+ H ++
Sbjct: 17 MLKKTSRTFYIPISYLELGLKEAVTSAYLCMRAIDEIEDHKELTDEVKVKLLLGIH-DIF 75
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED-----------ITKRMGAGM 151
E ++ + H+ + + E+ I+D I R A M
Sbjct: 76 KSE----------DTMVTRTQHLLSPYQEILPAVTMQIDDWALLCPSSCAPIVYRYIAKM 125
Query: 152 AKFICKEVESI------DDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLF 204
+ + + V+S +D D Y Y VAG+VG LS+L+ + GT+ + +++ G
Sbjct: 126 SLHMAQWVQSGWNIHTEEDLDRYTYSVAGMVGELLSELWLWHDGTQSDSTKAIAFGRG-- 183
Query: 205 LQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNAL 264
LQ NI+R+ ED++ + F+P + W +M
Sbjct: 184 LQAVNILRNREEDLH---RGVDFYP-DGWG---------------------FKEMQQYTR 218
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
+++ Y++ L+D +FC IP +A T+ L + G K+ R K+++R
Sbjct: 219 RNLQIADSYIADLKDGPALKFCKIPLSLAHATVNL------ISAGGSKLTRDAVLKIVNR 272
Query: 325 TNN 327
Sbjct: 273 VTG 275
>gi|312796601|ref|YP_004029523.1| farnesyl-diphosphate farnesyltransferase [Burkholderia rhizoxinica
HKI 454]
gi|312168376|emb|CBW75379.1| Farnesyl-diphosphate farnesyltransferase (EC 2.5.1.21)
[Burkholderia rhizoxinica HKI 454]
Length = 402
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 34/311 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D I +++ +L+ HV
Sbjct: 59 LLKGVSRSFYLTLRVLPAGMRDPVGLAYLLARAADTIADTPLIEPALRLRMLLTLRAHVN 118
Query: 103 D------------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
D R+ + + L++ +L + ++A+ I + G
Sbjct: 119 DAEHDRGPLREMARQLAAQHQQSDERRLLESLEPALAILQQLAERDREAVRGIVSTLTRG 178
Query: 151 M----AKFICKE------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNS 200
M F + + + + D+Y Y VAG VG +++ Y L D ++ S
Sbjct: 179 MEFDLTTFAHERSGQMVALRAWHELDQYTYMVAGCVGAFWTEMTYMHLPRVLHGDPVAMS 238
Query: 201 -----MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD +D+ I +C + P + +Y DL E + +A
Sbjct: 239 ARGVRFGKALQLTNVLRDCAKDLR-IGRC--YLPSTMLERYGLTPRDLLSAEAAGRARPV 295
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHA--IFRFCAIPQIMAIGTLALCYN--NIEVFRGVV 311
+ ++V +AL D + Y A+R A + C P ++ + TL L N N V
Sbjct: 296 MLELVRHALDQFRDAIDYTLAIRRSAPRLRLACLWPIVIGLKTLLLLVNSANWLVPEPAA 355
Query: 312 KMRRGLTAKVI 322
K+RR VI
Sbjct: 356 KVRRQQVYGVI 366
>gi|251799354|ref|YP_003014085.1| squalene/phytoene synthase [Paenibacillus sp. JDR-2]
gi|247546980|gb|ACT03999.1| Squalene/phytoene synthase [Paenibacillus sp. JDR-2]
Length = 273
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
+ML SR+F + I +L +L+ AV YL +RA+D VEDD +P +K +L+ + +
Sbjct: 16 TMLKLTSRTFYIPISKLIPELKEAVSSAYLCMRAIDEVEDDEKLPAPIKKELLLGAAQAM 75
Query: 102 YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK----GYQDAIEDITKRMGAGMAKFICK 157
+ S + ++ D+ V+ E + G + + M MA ++
Sbjct: 76 KSQNIEESL-HQVWQPHRDRLPEVTLRMSEWAQLCPAGLAPTVYNYITMMAEQMADWVGT 134
Query: 158 E--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRDY 214
+ + +D D+Y Y VAG+VG LS ++ + GTE ++ + G LQ NI+R+
Sbjct: 135 SWNIRTEEDLDKYTYSVAGMVGEMLSDIWRWYDGTETDREKAI--AFGRGLQAVNIMRNR 192
Query: 215 LEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED+ + F+P + W DLK DM+ +++ +Y+
Sbjct: 193 AEDME---RGVDFFP-DGW--------DLK-------------DMLRYTRRNLKQADEYL 227
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
+ L+ FC IP +A T+ L + G K+ R K++ +
Sbjct: 228 AELKKGPARSFCQIPLSLAHATVNL------IAVGGNKLTRDAVLKIVSK 271
>gi|381208542|ref|ZP_09915613.1| hypothetical protein LGrbi_01235 [Lentibacillus sp. Grbi]
Length = 273
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 118/273 (43%), Gaps = 54/273 (19%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I L + L V YL +RA+D +ED ++ T+ K +L R
Sbjct: 13 NILKQTSRTFYIPITLLKSPLNQTVGSAYLCMRAVDEMEDHEALDTETKQHLL----RTT 68
Query: 102 YD--REWHFSCGTKEYKVLMDQFH--------HVSTAFLELGKGYQDAIEDITKRMGAGM 151
D R HF + Y+ L+ + + L G D ++ T M AGM
Sbjct: 69 SDLLRRDHFDG--EAYRELVQPYETQLPEVTLRLDDWLLLCPDGIVDNVKATTSMMAAGM 126
Query: 152 AKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKT 208
A + K ++ DD D+Y YYVAGLVG+ LS ++ + GT L+ G LQ
Sbjct: 127 ADWAEKGWNIKDKDDLDDYTYYVAGLVGVMLSDIWEWYDGTR--TDRDLAIGYGRGLQTV 184
Query: 209 NIIRDYLED----INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNAL 264
NI+R+ ED ++ +P W R+ +Y E+N KA +
Sbjct: 185 NILRNQDEDKERGVSFVPDG---WTRDDLFRYT--------EKNLAKADE---------- 223
Query: 265 MHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
YM + I FC IP +A TL
Sbjct: 224 --------YMQDINTRTIKLFCRIPLALAKRTL 248
>gi|167838656|ref|ZP_02465515.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis MSMB43]
Length = 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 46/325 (14%)
Query: 35 PHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +
Sbjct: 4 PTRAFLLGPLLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLEL 63
Query: 94 LIAFHRHVYDR-----------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
L++ V E + K L++ +LG + A+
Sbjct: 64 LLSLRAQVNGTPDPDALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLGAADRGAVRG 123
Query: 143 ITKRMGAGM----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL 192
+ + GM + + + D Y Y VAG VG F+ + T
Sbjct: 124 VVTTLTEGMEFDLRTFPDESSGRLAALREWPELDRYTYLVAGCVG-----EFWTTMTCAH 178
Query: 193 APDSLSN----------SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
P L+ G LQ TN++RD +D+ I +C + P+ + +Y + +D
Sbjct: 179 LPGLLTEREDTMAERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLDEYGLRADD 235
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALC 300
L + S +A ++ +V L H + Y A+ R R C P + + TLAL
Sbjct: 236 LLRPDASLRARPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALL 295
Query: 301 YNN---IEVFRGVVKMRRGLTAKVI 322
+N ++ R K+RRG ++I
Sbjct: 296 ASNDAWLDPAR-ASKVRRGDVYRII 319
>gi|424906795|ref|ZP_18330290.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis MSMB43]
gi|390927801|gb|EIP85208.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis MSMB43]
Length = 356
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 46/325 (14%)
Query: 35 PHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +
Sbjct: 11 PTRAFLLGPLLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLEL 70
Query: 94 LIAFHRHVYDR-----------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
L++ V E + K L++ +LG + A+
Sbjct: 71 LLSLRAQVNGTPDPDALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLGAADRGAVRG 130
Query: 143 ITKRMGAGM----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL 192
+ + GM + + + D Y Y VAG VG F+ + T
Sbjct: 131 VVTTLTEGMEFDLRTFPDESSGRLAALREWPELDRYTYLVAGCVG-----EFWTTMTCAH 185
Query: 193 APDSLSN----------SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
P L+ G LQ TN++RD +D+ I +C + P+ + +Y + +D
Sbjct: 186 LPGLLTEREDTMAERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLDEYGLRADD 242
Query: 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALC 300
L + S +A ++ +V L H + Y A+ R R C P + + TLAL
Sbjct: 243 LLRPDASLRARPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALL 302
Query: 301 YNN---IEVFRGVVKMRRGLTAKVI 322
+N ++ R K+RRG ++I
Sbjct: 303 ASNDAWLDPAR-ASKVRRGDVYRII 326
>gi|89097372|ref|ZP_01170261.1| hypothetical protein B14911_27275 [Bacillus sp. NRRL B-14911]
gi|89087668|gb|EAR66780.1| hypothetical protein B14911_27275 [Bacillus sp. NRRL B-14911]
Length = 288
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
Y ML + SR+F + I L L+ V YL +RA+D +ED + + K +L +
Sbjct: 27 AYEMLKETSRTFLIPISYLSPGLKETVSSAYLCMRAIDEIEDHPELEAESKDHLLRSISE 86
Query: 100 ------HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL-GKGYQDAIEDITKRMGAGMA 152
+ D + F K YK + + ++ L ++ + D T M GMA
Sbjct: 87 LLKKPVNAEDMKSLF----KPYKSKLPEVTLRLYDWIRLCPASIKEKVLDSTSTMAKGMA 142
Query: 153 KFICK--EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
+ K + D D+Y +YVAGLVG+ LS ++ + D L+ + G LQ NI
Sbjct: 143 DWTMKGWNIRDEKDLDDYTFYVAGLVGVMLSDIWKWHDNTETKKD-LAIAFGRGLQSVNI 201
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+R+ +ED + F+P + W + M + A ++
Sbjct: 202 LRNKIEDKE---RGVSFYP-DGWDN---------------------DQMFSYARRNLALA 236
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLA 298
Y+ ++ I FC IP +A GTL+
Sbjct: 237 DAYIKDIKSAPILNFCRIPLALAHGTLS 264
>gi|73662412|ref|YP_301193.1| hypothetical protein SSP1103 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494927|dbj|BAE18248.1| hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 284
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 53/301 (17%)
Query: 19 KLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDT 78
K + ++ A+K+ P + +L + SR+F + I L +L++ V YLVLRA+D
Sbjct: 6 KGRYENKMADKKFPKD-----AMRVLKETSRTFYIPITFLEKELKHTVASAYLVLRAIDE 60
Query: 79 VEDDTSIPTDVKVPILIAFH---RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKG 135
+ED ++ D+K L+ + +D + K ++L + + + LG+
Sbjct: 61 IEDHEALSNDMKYNTLMQISELFKETFDED-------KYLQILAPVKNDMPEVTIRLGE- 112
Query: 136 YQDAIEDITK--------RMGAGMAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF- 184
+ DA + T+ M GMAK+ ++ + D D+Y YYVAGLVG+ LS+L+
Sbjct: 113 WIDACPEHTRAVVLEASSEMAYGMAKWAKANWDIHTKADLDDYTYYVAGLVGVMLSQLWD 172
Query: 185 YASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+G + L+ G LQ NI+R+ ED E + F P + W +
Sbjct: 173 LCAGVK--TDRDLAIGYGRGLQAVNILRNQHEDYEE--RGVSFVPDD-WDR--------- 218
Query: 245 YEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNI 304
+D+ A ++ YM + I FC +P +A +L N
Sbjct: 219 ------------DDLFEYAEDNLAKADAYMKDINKKTILLFCRLPLALAHKSLKAMQNGR 266
Query: 305 E 305
E
Sbjct: 267 E 267
>gi|403667418|ref|ZP_10932728.1| hypothetical protein KJC8E_01552 [Kurthia sp. JC8E]
Length = 255
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 17/187 (9%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA----F 97
++L SR+F + I L D++ V YL +RA+D +ED I + K +L
Sbjct: 13 AVLKATSRTFFIPITFLEKDIKTTVATAYLCMRAIDEIEDHEDISVEEKARMLTKTAELL 72
Query: 98 HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGY-QDAIEDITKRMGAGMAK--- 153
+ +D++ + YK ++ + +L L ++ + T M GMAK
Sbjct: 73 NVTPFDQD-AYEEAISSYKAILPEVSLRLNDWLTLCPNVIREKVAASTAEMAEGMAKWAL 131
Query: 154 --FICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAPDSLSNSMGLFLQKTNI 210
++CK E +DD Y YYVAGLVG LS ++Y +G E L+ G LQ NI
Sbjct: 132 KGWVCKTKEDLDD---YTYYVAGLVGTMLSDIWYTFTGIE--TDRELAIGYGRGLQAVNI 186
Query: 211 IRDYLED 217
+R+ ED
Sbjct: 187 LRNQEED 193
>gi|448561727|ref|ZP_21634935.1| farnesyl-diphosphate farnesyltransferase [Haloferax prahovense DSM
18310]
gi|445720355|gb|ELZ72030.1| farnesyl-diphosphate farnesyltransferase [Haloferax prahovense DSM
18310]
Length = 318
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 30/297 (10%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDPDDDTTVDEFVTAVQPHLPPEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVTPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEI 221
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYT-- 182
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRD 279
+ ++ P + E++ E++D+A + +A ++D Y+ LR+
Sbjct: 183 AENNVYLPADWLDDAGVPQEEVVAPEHNDRAASVVKRTADHAKSFLDDAQTYLETVPLRE 242
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
AIP ++A+GTL N E V VK+ R V+ N + LA
Sbjct: 243 GNTLAAWAIPFLLAVGTLRELVANPEHAVTGEGVKISRQEVFAVVSEMNGASAESLA 299
>gi|169827705|ref|YP_001697863.1| hypothetical protein Bsph_2162 [Lysinibacillus sphaericus C3-41]
gi|168992193|gb|ACA39733.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 246
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 50/255 (19%)
Query: 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKV 117
L DL+ +V YL +RA+D +ED + DVK +L A + D + + Y+
Sbjct: 2 LENDLKVSVAAAYLAMRAIDEIEDHEQLSNDVKFDLLSATSDLLKD-----TFNNEAYQE 56
Query: 118 LMDQF-HHVSTAFLELG-------KGYQDAIEDITKRMGAGMAKFICK--EVESIDDYDE 167
L+ + + L L + + ++ T M GMAK+ +V + +D D+
Sbjct: 57 LVAPYAAQLPEVTLRLADWLAFCPEESRKIVQASTSEMAFGMAKWAKANWQVHTREDLDD 116
Query: 168 YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE-----IP 222
Y YYVAGLVG LS+L +A G + L+ G LQ NI+R+ ED++E +P
Sbjct: 117 YTYYVAGLVGTMLSEL-WAWGADIQTDRDLAIGYGRGLQAVNILRNQHEDMDERGVSFVP 175
Query: 223 KCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
W RE Y EEN KA D+ YM + +
Sbjct: 176 DG---WTREDLFTYA--------EENLAKA-----DL-------------YMKDINKRTV 206
Query: 283 FRFCAIPQIMAIGTL 297
FC +P +A TL
Sbjct: 207 LLFCRLPLALAHKTL 221
>gi|418575948|ref|ZP_13140095.1| hypothetical protein SSME_11510 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325696|gb|EHY92827.1| hypothetical protein SSME_11510 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 272
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 53/293 (18%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
A+K+ P + +L + SR+F + I L +L++ V YLVLRA+D +ED ++
Sbjct: 2 ADKKFPKD-----AMRVLKETSRTFYIPITFLEKELKHTVASAYLVLRAIDEIEDHEALS 56
Query: 87 TDVKVPILIAFH---RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDI 143
D+K +L+ + +D + K ++L + + + LG+ + DA +
Sbjct: 57 NDMKYNMLMQISELFKETFDED-------KYLQILAPVKNDMPEVTIRLGE-WIDACPEH 108
Query: 144 TK--------RMGAGMAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDL 192
T+ M GMAK+ ++ + D D+Y YYVAGLVG+ LS+L+ +G +
Sbjct: 109 TRAVVLEASSEMAYGMAKWAKANWDIHTKADLDDYTYYVAGLVGVMLSQLWDLCAGVK-- 166
Query: 193 APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
L+ G LQ NI+R+ ED E + F P + W +
Sbjct: 167 TDRDLAIGYGRGLQAVNILRNQHEDYEE--RGVSFVPDD-WDR----------------- 206
Query: 253 VQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
+D+ A ++ YM + I FC +P +A +L N E
Sbjct: 207 ----DDLFEYAQDNLAKADAYMKDINKKTILLFCRLPLALAHKSLKAMKNGRE 255
>gi|307726921|ref|YP_003910134.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1003]
gi|307587446|gb|ADN60843.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1003]
Length = 348
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 33/279 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I ++
Sbjct: 2 PTPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPARRL 61
Query: 92 PIL---------IAFHRHVYDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDA 139
+L +A ++ R E + KVL++ +L + + A
Sbjct: 62 ELLLSLRDQVNGVASDGALFQRMAAEVADQQSQSDEKVLLESLGPALDVLAQLSESDRKA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA-- 186
+ +I + GM +F + + ++ +Y D Y Y VAG VG + + YA
Sbjct: 122 VREIVSTLTEGM-EFDLRTFPDERSGRIAALHEYGELDRYTYLVAGCVGEFWTTMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT P S+ G LQ TN++RD +D+ I +C + P+ + +++ +DL
Sbjct: 181 PGTLKAQPASMKARGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPQTMLAQHGLSPQDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI 282
NS +A + +++ L H + L+Y A+ A+
Sbjct: 238 LLPANSLRARPLMVELLRKTLDHFREALEYTLAIPAFAV 276
>gi|77164824|ref|YP_343349.1| squalene/phytoene synthase [Nitrosococcus oceani ATCC 19707]
gi|254433875|ref|ZP_05047383.1| Squalene and phytoene synthases superfamily [Nitrosococcus oceani
AFC27]
gi|76883138|gb|ABA57819.1| farnesyl-diphosphate farnesyltransferase [Nitrosococcus oceani ATCC
19707]
gi|207090208|gb|EDZ67479.1| Squalene and phytoene synthases superfamily [Nitrosococcus oceani
AFC27]
Length = 366
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 144/350 (41%), Gaps = 48/350 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+FAL I QL L+ V YL+ R DT+ED+ ++ K F V
Sbjct: 20 ILPGVSRTFALTIPQLPPPLQEVVANGYLLCRIADTIEDEPTLSIAQKKYFSNLFVTVVA 79
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKG--------------YQDAIEDITKRMG 148
+ S Y +L + H A EL + + A+E M
Sbjct: 80 GQTSAESFACSLYPLLSE---HTLAAERELIQNAPRILRITYSFNPRQRAALERCVCIMC 136
Query: 149 AGMAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKLF--YASGT--EDLAPDSLSNS 200
GM +F + + ++ D+YCY+VAG+VG L++LF Y+ G A +L S
Sbjct: 137 DGMPRFQNTASLRGLADMEAMDQYCYFVAGVVGEMLTELFCDYSPGINRNREALRNLMVS 196
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFW-PREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
G LQ TNI++D +D K R+ W PR ++ + L++L+ L +
Sbjct: 197 FGQGLQMTNILKDIWDD----RKRRICWLPRTVFEQAGFNLDNLEPGHYQSAFGDGLQHL 252
Query: 260 VTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV-----VK 312
+ H+ + L Y + + I RFC + AIG L + R VK
Sbjct: 253 IGVTHAHLRNALTYTLLIPPEEGGIRRFC----LWAIGLAMLTLRKLHRRRNFSASWQVK 308
Query: 313 MRRGLTAKVIDRTN---NMTDVYLAFYDFSNILKP----KINKNDPNATK 355
+ R I T+ N V ++ ++ P K+N ND T
Sbjct: 309 ISRRSVKTTILLTSIAANHDKVLTFLFNLASKGVPFIPLKVNSNDSKQTS 358
>gi|403383139|ref|ZP_10925196.1| hypothetical protein KJC30_00520 [Kurthia sp. JC30]
Length = 275
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 114/272 (41%), Gaps = 50/272 (18%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL------- 94
++L SR+F + I L +++ V YL +RA+D +ED I + K +L
Sbjct: 13 NVLKATSRTFFIPITFLEKEMKTTVATAYLCMRAIDEIEDHEDISVEEKARMLNKTADLL 72
Query: 95 --IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL-GKGYQDAIEDITKRMGAGM 151
+ F+ VY E +Y ++ + +L L + + T M GM
Sbjct: 73 ENLPFNEEVYLAE------IADYANILPEVSLRLADWLSLCPDAIRTRVAASTAEMARGM 126
Query: 152 AK-----FICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
AK ++CK E +DD Y YYVAGLVG+ LS ++ D D L+ G LQ
Sbjct: 127 AKWALKGWVCKTKEDLDD---YTYYVAGLVGVMLSDIWKTFADIDTDRD-LAIGFGRGLQ 182
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMH 266
NI+R+ ED E C F P E W++ D ND +T A
Sbjct: 183 AVNILRNQDEDA-ERGVC--FVP-EGWTR--------------DDLFAYANDNLTKA--- 221
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA 298
Y L +I FC IP +A TLA
Sbjct: 222 ----EAYNQQLSKRSIKMFCKIPLALAHKTLA 249
>gi|333375189|ref|ZP_08467013.1| phytoene/squalene synthetase [Kingella kingae ATCC 23330]
gi|332971606|gb|EGK10556.1| phytoene/squalene synthetase [Kingella kingae ATCC 23330]
Length = 318
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 20/182 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ K SF + L T+ RNA+ + Y R LD V DD S + +L
Sbjct: 41 YCHDKAQKSGSSFLAGFKFLSTERRNAMTVLYAFCRELDDVVDDCSDANVARQTLL---- 96
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGY---QDAIEDITKRMGAGMAKFI 155
W K Y+ H V+ A + + QD +EDI M +
Sbjct: 97 -------WWRQDLAKAYQANATPEHPVNQALQSVAPAFALPQDELEDIINGMEMDLHHV- 148
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
+S DD YCY VAG+VG ++++ + + L + +GL LQ TNIIRD
Sbjct: 149 --RYQSFDDLQYYCYRVAGVVGRLIARILGYANPQTL---QYAEKLGLALQLTNIIRDVG 203
Query: 216 ED 217
ED
Sbjct: 204 ED 205
>gi|448586219|ref|ZP_21648293.1| farnesyl-diphosphate farnesyltransferase [Haloferax gibbonsii ATCC
33959]
gi|445724874|gb|ELZ76500.1| farnesyl-diphosphate farnesyltransferase [Haloferax gibbonsii ATCC
33959]
Length = 318
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 30/297 (10%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDPDDDTTVDEFVSAVQPHLPPEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVTPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEI 221
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYT-- 182
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRD 279
+ ++ P + E++ E++D+A + +A ++D Y+ LR+
Sbjct: 183 AENNVYLPADWLDDAGVPQEEVVAPEHNDRAASVVKRTADHAKSFLDDAQTYLETVPLRE 242
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
AIP ++A+GTL N E V +K+ R V+ N + LA
Sbjct: 243 GNTLAAWAIPFLLAVGTLRELVANPEHAVTGEGIKISRQEVFAVVSEMNGASAESLA 299
>gi|126444694|ref|YP_001061424.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 668]
gi|126224185|gb|ABN87690.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 668]
Length = 349
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSPPDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +A
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRARPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 249 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRG 316
K+RRG
Sbjct: 308 SKVRRG 313
>gi|386826398|ref|ZP_10113505.1| phytoene/squalene synthetase [Beggiatoa alba B18LD]
gi|386427282|gb|EIJ41110.1| phytoene/squalene synthetase [Beggiatoa alba B18LD]
Length = 362
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 27/286 (9%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
AF L VSR+FAL I +L L ++ YL+ R DT+ED+ S+ + K F
Sbjct: 5 AFQQQSLQGVSRTFALTIPRLPPSLCRSIGNGYLLCRIADTIEDEPSLTAEQKHEFFQKF 64
Query: 98 HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFL-----------ELGKGYQDAIEDITKR 146
V ++ F+ Y L D + L + Q + K
Sbjct: 65 IDVVAGKQSAFTFSRALYPRLSDSMLPAERQLVFDTEKVIQITHSLPQTQQAILLRCVKI 124
Query: 147 MGAGMAKFIC---------KEVESIDDYDEYCYYVAGLVGLGLSKLF----YASGTEDLA 193
M GM++F + + ++ ++YCYYVAG+VG ++ LF A +
Sbjct: 125 MSNGMSEFQFLWEKLRQSQQGLSTLTQMNDYCYYVAGVVGEMVTDLFCDYSPAINQHRQS 184
Query: 194 PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
+L+ S G LQ TNI++D +D + + P E ++K L L
Sbjct: 185 LRTLALSFGQGLQMTNILKDIWDD---QARGACWLPSEEFAKVGFDLRTLNPNNYQPAFG 241
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLAL 299
+ L+ ++ A H+ + L+Y+ L + C MA+ L L
Sbjct: 242 EGLSQLIGVAHHHLHNTLRYICLLPSKEVEIRCFCLWTMAMSLLTL 287
>gi|171911724|ref|ZP_02927194.1| squalene/phytoene synthase [Verrucomicrobium spinosum DSM 4136]
Length = 341
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 45/316 (14%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L VSRSF L ++ L LR + + YL+ RA DT+ D +P V++ L F R V
Sbjct: 11 LLEGVSRSFYLTLKALPQGLREPLSLAYLLARAADTMADTIQVPDAVRLTCLAEFERRVR 70
Query: 102 ----------------------YDREWHFSCGTKEYKVLMDQFH-----HVSTAFLELGK 134
+ + H + + + M+ FH S LG
Sbjct: 71 LPLRDPIAEGVLVARLLVDFVPHQEDAHEARLLERLQEAMNAFHVSPEGQKSAMMGVLGP 130
Query: 135 GYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKL--FYASGT--E 190
Q + DI + G G + + + D D+Y Y VAG VG ++L A G+ E
Sbjct: 131 IIQGQMLDIQRFPGDGQLRALA----TTRDLDDYTYLVAGCVGEFWTRLCATEAEGSFNE 186
Query: 191 DLAPDSLSNS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
++ D + G LQ NI+RD +D+ ++ +C + P E L +
Sbjct: 187 GVSLDEMVKRGIRYGKGLQLVNILRDPGKDL-KLGRC--YIPEEALQ--TAGLSVAAVQA 241
Query: 248 NSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALC-YNNIEV 306
+ K + L H+ + ++Y+ + + + A+P ++ I TLAL +
Sbjct: 242 DPAKLMPLLTPWKKLCREHLHEGMRYLDEVSNKRLLYATALPLLLGIKTLALIEAADWPT 301
Query: 307 FRGVVKMRRGLTAKVI 322
+ VK+ RG +KV+
Sbjct: 302 LQAGVKVSRGEVSKVL 317
>gi|114321837|ref|YP_743520.1| farnesyl-diphosphate farnesyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228231|gb|ABI58030.1| farnesyl-diphosphate farnesyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 373
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF 97
A+ S+L VSR+FAL I QL LR V YL+ R DT+ED + K
Sbjct: 26 AYQDSVLPGVSRTFALTIPQLPEYLRGTVTNAYLLCRIADTIEDHLPGDSVAKAEWFKRL 85
Query: 98 HRHVYDREWHFSCGTKEYKV------------LMDQFHHVSTAFLELGKGYQDAIEDITK 145
+ +E G + ++ L+ H V L + ++ +
Sbjct: 86 DIALRGQEPAEPFGRELARMFPRQSTPRTELELVRNTHRVLRVTRALPAWQRRSVVRCVR 145
Query: 146 RMGAGMAKFIC-KEVESIDD---YDEYCYYVAGLVGLGLSKLFYASGT------EDLAPD 195
+ GMA+F K + + D +D+YCY+VAG+VG L+ LF T ++L
Sbjct: 146 VLAKGMARFQANKRPDGLADMAAFDDYCYHVAGVVGEMLTVLFCGYSTVMGRHRQELM-- 203
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
+S S G LQ TNI++D D E C + PR+I++ L+ +
Sbjct: 204 RMSLSFGQALQMTNILKDVWND-RERGVC--WLPRDIFAGAGCPLDADADWAGDPHFHEG 260
Query: 256 LNDMVTNALMHVEDCLKYM--SALRDHAIFRFCAIPQIMAIGTLALCYNNI 304
+ MV A H++ +Y+ + + I RFC I A+G AL NI
Sbjct: 261 MRRMVAIARGHLDRGFEYVLQIPVSEPGIRRFC----IWALGMAALTLGNI 307
>gi|254189473|ref|ZP_04895983.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254299529|ref|ZP_04966978.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 406e]
gi|157809635|gb|EDO86805.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 406e]
gi|157937151|gb|EDO92821.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei Pasteur 52237]
Length = 408
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 72 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 131
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 132 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 191
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + V ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 192 -EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 250
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 251 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 307
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 308 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 366
Query: 311 VKMRRG 316
K+RRG
Sbjct: 367 SKVRRG 372
>gi|392868285|gb|EAS34052.2| farnesyl-diphosphate farnesyltransferase [Coccidioides immitis RS]
Length = 392
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 43/210 (20%)
Query: 113 KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF--ICKE------VESIDD 164
K+ +VL+ +F V+ F L Y+ I+DI K MG MA + + E V++I D
Sbjct: 126 KDREVLV-KFDCVAREFNLLKHEYRAIIKDIAKGMGNFMADYAKMADENANGLSVKNIKD 184
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
Y+ Y +YVAGLV GL++L S SN IRD ED +
Sbjct: 185 YELYRHYVAGLVDEGLTRL------------SCSN-----------IRDIREDYDSK--- 218
Query: 225 RMFWPREIWSKYVNKLEDLKYEENSDKAVQ-CLNDMVTNALMHVEDC-----LKYMSALR 278
R FWP E+WSKYV DL +N +KA+Q +N + + DC L S LR
Sbjct: 219 RYFWPEEVWSKYVENFSDLFLPQNREKALQRSINLQLCCYTANNGDCDARALLSKPSNLR 278
Query: 279 -DHAIFRFCAIPQIMAIGT-LALCYNNIEV 306
+H + ++P I T L+ C +++
Sbjct: 279 PEHQNLKGLSVPNHDRINTGLSTCLRSVQA 308
>gi|76819243|ref|YP_336919.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1710b]
gi|76583716|gb|ABA53190.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1710b]
Length = 513
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 177 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 236
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 237 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 296
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + V ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 297 -EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 355
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 356 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 412
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN 303
++ +V L H + Y A+ R R C P + + TLAL +N
Sbjct: 413 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN 462
>gi|403378865|ref|ZP_10920922.1| squalene/phytoene synthase [Paenibacillus sp. JC66]
Length = 272
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 42/265 (15%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L SR+F + I +L L+ AV YL +RA+D +EDD +P K+ +L + +
Sbjct: 14 LAATSRTFYIPISRLVPGLQEAVASAYLCMRAIDEIEDDPHLPAPDKIKLLRQVAVFLKN 73
Query: 104 REWHFSCGTKEYKVLMDQFH-HVSTAFLELG-------KGYQDAIEDITKRMGAGMAKFI 155
E +E +V+ + + L+L + T M AGMA ++
Sbjct: 74 AE----LDPREAEVIFANYKKSLPKVTLKLADWALFCPSTIAPTVWAATAEMAAGMADWV 129
Query: 156 CKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ + + D D+Y Y VAG VG+ LS ++ + GTE ++ G LQ NI+R
Sbjct: 130 ERNWVIRTEKDLDDYTYCVAGAVGVLLSDIWNWYDGTETDYEEA--TGFGRGLQTVNIVR 187
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLK 272
+ ED+ + F+P + W L DM +++
Sbjct: 188 NRKEDLE---RGVDFFP-DGWD---------------------LQDMFAYTRRNLQLGQA 222
Query: 273 YMSALRDHAIFRFCAIPQIMAIGTL 297
Y+ L+ + FC IP +A GTL
Sbjct: 223 YIEDLKPGPVLDFCRIPLALASGTL 247
>gi|448549706|ref|ZP_21628311.1| farnesyl-diphosphate farnesyltransferase [Haloferax sp. ATCC
BAA-645]
gi|448555183|ref|ZP_21631223.1| farnesyl-diphosphate farnesyltransferase [Haloferax sp. ATCC
BAA-644]
gi|445712754|gb|ELZ64535.1| farnesyl-diphosphate farnesyltransferase [Haloferax sp. ATCC
BAA-645]
gi|445717928|gb|ELZ69631.1| farnesyl-diphosphate farnesyltransferase [Haloferax sp. ATCC
BAA-644]
Length = 318
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 30/297 (10%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDPDDDTTVDEFVTAVQPHLPAEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVRPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEI 221
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYTS- 183
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRD 279
+ ++ P + E++ E++D+ + +A ++D Y+ LR+
Sbjct: 184 -ENNVYLPADWLDDAGVPQEEVVDPEHNDRTASVVARTADHAKSFLDDAQTYLETVPLRE 242
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
AIP ++A+GTL N E V VK+ R V+ N + LA
Sbjct: 243 GNTLAAWAIPFLLAVGTLRELVANPEHAVTGEGVKISRQEVFAVVSEMNGASSESLA 299
>gi|448602698|ref|ZP_21656633.1| farnesyl-diphosphate farnesyltransferase [Haloferax sulfurifontis
ATCC BAA-897]
gi|448624984|ref|ZP_21670751.1| farnesyl-diphosphate farnesyltransferase [Haloferax denitrificans
ATCC 35960]
gi|445747050|gb|ELZ98507.1| farnesyl-diphosphate farnesyltransferase [Haloferax sulfurifontis
ATCC BAA-897]
gi|445748746|gb|EMA00192.1| farnesyl-diphosphate farnesyltransferase [Haloferax denitrificans
ATCC 35960]
Length = 318
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 30/297 (10%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V+ + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDPDDDTTVDEFVHAVQPHLPPEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVTPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEI 221
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNIDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYTS- 183
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRD 279
+ ++ P + E++ E++D+ + +A ++D Y+ LR+
Sbjct: 184 -ENNVYLPADWLDDAGVPQEEVVAPEHNDRTASVVQRTADHAKSFLDDAQTYLETVPLRE 242
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
AIP ++A+GTL N E V VK+ R V+ N LA
Sbjct: 243 GNTLAAWAIPFLLAVGTLRELVANPEHAVTGEGVKISRQEVFAVVTEMNGSGSESLA 299
>gi|386863985|ref|YP_006276933.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1026b]
gi|418395125|ref|ZP_12969156.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 354a]
gi|418535053|ref|ZP_13100855.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1026a]
gi|418557800|ref|ZP_13122386.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 354e]
gi|385357081|gb|EIF63159.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1026a]
gi|385364280|gb|EIF70003.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 354e]
gi|385374298|gb|EIF79201.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 354a]
gi|385661113|gb|AFI68535.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1026b]
Length = 349
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSASDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R + C P + + TLAL +N ++ R
Sbjct: 249 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRG 316
K+RRG
Sbjct: 308 SKVRRG 313
>gi|237507474|ref|ZP_04520189.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei MSHR346]
gi|234999679|gb|EEP49103.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei MSHR346]
Length = 404
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 68 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 127
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 128 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 187
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 188 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 246
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 247 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 303
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 304 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 362
Query: 311 VKMRRG 316
K+RRG
Sbjct: 363 SKVRRG 368
>gi|126654415|ref|ZP_01726158.1| hypothetical protein BB14905_22093 [Bacillus sp. B14905]
gi|126589135|gb|EAZ83325.1| hypothetical protein BB14905_22093 [Bacillus sp. B14905]
Length = 199
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L SR+F + I L DL+ +V YL +RA+D +ED + DVK +L A +
Sbjct: 24 VLKDTSRTFYIPITFLKNDLKVSVAAAYLAMRAIDEIEDHEQLSNDVKFDLLSATSDLLK 83
Query: 103 DREWHFSCGTKEYKVLMDQF-HHVSTAFLELG-------KGYQDAIEDITKRMGAGMAKF 154
D + + Y+ L+ + + L L + + ++ T M GMAK+
Sbjct: 84 D-----TFNDEAYQELLAPYAAQLPEVTLRLADWLTFCPEESRKIVQASTSEMAFGMAKW 138
Query: 155 --ICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+V + +D D+Y YYVAGLVG LS+L +A G + L+ G LQ NI+R
Sbjct: 139 SKANWQVHTREDLDDYTYYVAGLVGTMLSEL-WAWGADIQTDRDLAIGYGRGLQAVNILR 197
Query: 213 D 213
+
Sbjct: 198 N 198
>gi|53721267|ref|YP_110252.1| squalene/phytoene synthase [Burkholderia pseudomallei K96243]
gi|167913529|ref|ZP_02500620.1| squalene/phytoene synthase [Burkholderia pseudomallei 112]
gi|52211681|emb|CAH37677.1| putative squalene/phytoene synthase [Burkholderia pseudomallei
K96243]
Length = 356
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 20 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 79
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 80 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 139
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + V ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 140 -EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 198
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 199 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 255
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 256 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 314
Query: 311 VKMRRG 316
K+RRG
Sbjct: 315 SKVRRG 320
>gi|254182738|ref|ZP_04889331.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1655]
gi|184213272|gb|EDU10315.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1655]
Length = 513
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 177 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 236
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 237 GAPDPHALARIAGEVAGQQAQTDEKTLLESLSPALAVLSQLSAPDRAAVRGVVTTLTEGM 296
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 297 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 355
Query: 199 N---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 356 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 412
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN 303
++ +V L H + Y A+ R R C P + + TLAL +N
Sbjct: 413 MHVLVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN 462
>gi|254195437|ref|ZP_04901865.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei S13]
gi|169652184|gb|EDS84877.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei S13]
Length = 408
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 72 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 131
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 132 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 191
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 192 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 250
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 251 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 307
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 308 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 366
Query: 311 VKMRRG 316
K+RRG
Sbjct: 367 SKVRRG 372
>gi|254263333|ref|ZP_04954198.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1710a]
gi|254214335|gb|EET03720.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1710a]
Length = 349
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + V ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL--RDHAIFRFCAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R + C P + + TLAL +N ++ R
Sbjct: 249 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRG 316
K+RRG
Sbjct: 308 SKVRRG 313
>gi|126457897|ref|YP_001074370.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1106a]
gi|242312045|ref|ZP_04811062.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1106b]
gi|126231665|gb|ABN95078.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1106a]
gi|242135284|gb|EES21687.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1106b]
Length = 402
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 66 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 125
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 126 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 185
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 186 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 244
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 245 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 301
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 302 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 360
Query: 311 VKMRRG 316
K+RRG
Sbjct: 361 SKVRRG 366
>gi|167826772|ref|ZP_02458243.1| squalene/phytoene synthase [Burkholderia pseudomallei 9]
Length = 356
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 20 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 79
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 80 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 139
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 140 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 198
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 199 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 255
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 256 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 314
Query: 311 VKMRRG 316
K+RRG
Sbjct: 315 SKVRRG 320
>gi|167741208|ref|ZP_02413982.1| squalene/phytoene synthase [Burkholderia pseudomallei 14]
gi|167818391|ref|ZP_02450071.1| squalene/phytoene synthase [Burkholderia pseudomallei 91]
gi|167848290|ref|ZP_02473798.1| squalene/phytoene synthase [Burkholderia pseudomallei B7210]
gi|167896840|ref|ZP_02484242.1| squalene/phytoene synthase [Burkholderia pseudomallei 7894]
gi|167905226|ref|ZP_02492431.1| squalene/phytoene synthase [Burkholderia pseudomallei NCTC 13177]
gi|167921467|ref|ZP_02508558.1| squalene/phytoene synthase [Burkholderia pseudomallei BCC215]
gi|418542699|ref|ZP_13108113.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1258a]
gi|418549225|ref|ZP_13114297.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1258b]
gi|385354875|gb|EIF61108.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1258a]
gi|385355674|gb|EIF61838.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 1258b]
Length = 349
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 249 MHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRG 316
K+RRG
Sbjct: 308 SKVRRG 313
>gi|427709114|ref|YP_007051491.1| farnesyl-diphosphate farnesyltransferase [Nostoc sp. PCC 7107]
gi|427361619|gb|AFY44341.1| farnesyl-diphosphate farnesyltransferase [Nostoc sp. PCC 7107]
Length = 276
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 115/275 (41%), Gaps = 42/275 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L + SR+F + I L + L+ AV YL +RA+D +ED + K +L
Sbjct: 10 ILKETSRTFYIPISILPSGLQEAVASAYLCMRAIDEIEDHPELDNSTKAQLLHKISLTLQ 69
Query: 95 IAFHRHVYDREWHFSCGTKEYK-VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
D FS G Y+ VL + V L + I D T M MA
Sbjct: 70 AGVDGFAVD---AFSVGFSGYEDVLAEVTLRVREWSLLAPETIAPRIWDATAAMADRMAY 126
Query: 154 FICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNI 210
+ + ++E+ D D Y + VAG VGL LS L+ + GT+ +L+ G LQ NI
Sbjct: 127 WADRNWKIETESDLDRYTFGVAGAVGLLLSDLWTWYDGTQ--TNRTLAIGFGRGLQSVNI 184
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+R+++ED+ + F+P E W+ + +M AL ++
Sbjct: 185 LRNHIEDMG---RGVDFFP-EGWT---------------------VTEMQEYALRNLALA 219
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
Y AL FC IP +A GT+ N E
Sbjct: 220 DAYTKALPTGPALNFCQIPLTLAHGTIDALANGKE 254
>gi|254356065|ref|ZP_04972342.1| squalene/phytoene synthase family protein [Burkholderia mallei
2002721280]
gi|148025048|gb|EDK83217.1| squalene/phytoene synthase family protein [Burkholderia mallei
2002721280]
Length = 402
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 66 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 125
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 126 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 185
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 186 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 244
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +
Sbjct: 245 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRVRPL 301
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 302 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 360
Query: 311 VKMRRG 316
K+RRG
Sbjct: 361 SKVRRG 366
>gi|433433928|ref|ZP_20407949.1| farnesyl-diphosphate farnesyltransferase [Haloferax sp. BAB2207]
gi|432192907|gb|ELK49709.1| farnesyl-diphosphate farnesyltransferase [Haloferax sp. BAB2207]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 30/297 (10%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDPDDDTTVDEFVAAVQPHLPPEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVTPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLEDINEI 221
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDDYTS- 183
Query: 222 PKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA--LRD 279
+ ++ P + E++ E++D+ + +A ++D Y+ LR+
Sbjct: 184 -ENNVYLPADWLDDAGVPQEEVVDPEHNDRTASVVARTADHAKSFLDDAQTYLETVPLRE 242
Query: 280 HAIFRFCAIPQIMAIGTLALCYNNIE--VFRGVVKMRRGLTAKVIDRTNNMTDVYLA 334
AIP ++A+GTL N E V VK+ R V+ N + LA
Sbjct: 243 GNTLAAWAIPFLLAVGTLRELVANPEHAVTGEGVKISRQEVFAVVSEMNGASSESLA 299
>gi|254203376|ref|ZP_04909737.1| squalene/phytoene synthase family protein [Burkholderia mallei FMH]
gi|254205256|ref|ZP_04911609.1| squalene/phytoene synthase family protein [Burkholderia mallei JHU]
gi|147745615|gb|EDK52694.1| squalene/phytoene synthase family protein [Burkholderia mallei FMH]
gi|147754842|gb|EDK61906.1| squalene/phytoene synthase family protein [Burkholderia mallei JHU]
Length = 404
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 68 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 127
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 128 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 187
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 188 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 246
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +
Sbjct: 247 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRVRPL 303
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 304 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 362
Query: 311 VKMRRG 316
K+RRG
Sbjct: 363 SKVRRG 368
>gi|121596813|ref|YP_990443.1| squalene/phytoene synthase [Burkholderia mallei SAVP1]
gi|121224611|gb|ABM48142.1| squalene/phytoene synthase family protein [Burkholderia mallei
SAVP1]
Length = 516
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 180 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 239
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 240 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 299
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 300 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 358
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +
Sbjct: 359 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRVRPL 415
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN 303
++ +V L H + Y A+ R R C P + + TLAL +N
Sbjct: 416 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN 465
>gi|153873114|ref|ZP_02001802.1| Squalene/phytoene synthase [Beggiatoa sp. PS]
gi|152070421|gb|EDN68199.1| Squalene/phytoene synthase [Beggiatoa sp. PS]
Length = 317
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 137 QDAIEDITKRMGAGMAKFICKE----VESIDDYDEYCYYVAGLVGLGLSKLF--YAS--G 188
+ A+ + M GMA+F K ++++ + D YCYYVAG+VG L+ LF Y+
Sbjct: 91 RTALHRCVRIMAHGMAEFQQKSSIEGLKTLSEMDHYCYYVAGVVGEMLTDLFCDYSPHIA 150
Query: 189 TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
SL+ S G LQ TNI++D ED + C + PR+I+ + L +L E +
Sbjct: 151 QHKTQLQSLAVSFGQSLQMTNILKDIWED-RQRGAC--WLPRDIFIQKGFDLTNLSPEHH 207
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKY--MSALRDHAIFRFCAIPQIMAIGTLALC--YNNI 304
+ L++++ A H+ + L+Y + + I RFC MAI TL N
Sbjct: 208 EPAFGEGLSELIGVAHTHLHNALRYTLLIPANEKGIRRFCLWALGMAILTLRRINKRRNF 267
Query: 305 EVFRGVVKMRRGLTAKVIDR---TNNMTDVYLAFY 336
+ V RR + A ++ T+N T + FY
Sbjct: 268 SQGQQVKISRRSVKATILISNFATSNNTMLQALFY 302
>gi|134280921|ref|ZP_01767631.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 305]
gi|134247943|gb|EBA48027.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 305]
Length = 333
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 37/302 (12%)
Query: 47 VSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDR-- 104
+SRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++ + D
Sbjct: 1 MSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINDAPD 60
Query: 105 ---------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
E + K L++ +L + A+ + + GM +F
Sbjct: 61 PHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM-EFD 119
Query: 156 CK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLSNS-- 200
+ + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 120 LRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGI 179
Query: 201 -MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +A ++ +
Sbjct: 180 RFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRARPLMHAL 236
Query: 260 VTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGVVKMR 314
V L H + Y A+ R R C P + + TLAL +N ++ R K+R
Sbjct: 237 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-ASKVR 295
Query: 315 RG 316
RG
Sbjct: 296 RG 297
>gi|167722215|ref|ZP_02405451.1| squalene/phytoene synthase [Burkholderia pseudomallei DM98]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 N---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 249 MHVLVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRG 316
K+RRG
Sbjct: 308 SKVRRG 313
>gi|53716226|ref|YP_106390.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
23344]
gi|238561757|ref|ZP_00441592.2| squalene/phytoene synthase family protein [Burkholderia mallei GB8
horse 4]
gi|251768265|ref|ZP_02270052.2| squalene/phytoene synthase family protein [Burkholderia mallei
PRL-20]
gi|254176621|ref|ZP_04883279.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
10399]
gi|262192850|ref|YP_001079279.2| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
10247]
gi|52422196|gb|AAU45766.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
23344]
gi|160697663|gb|EDP87633.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
10399]
gi|238524044|gb|EEP87479.1| squalene/phytoene synthase family protein [Burkholderia mallei GB8
horse 4]
gi|243060350|gb|EES42536.1| squalene/phytoene synthase family protein [Burkholderia mallei
PRL-20]
gi|261826932|gb|ABM99262.2| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
10229]
gi|261835018|gb|ABO03462.2| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
10247]
Length = 356
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 20 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 79
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 80 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 139
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 140 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 198
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +
Sbjct: 199 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRVRPL 255
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 256 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 314
Query: 311 VKMRRG 316
K+RRG
Sbjct: 315 SKVRRG 320
>gi|381400908|ref|ZP_09925827.1| phytoene synthase, putative [Kingella kingae PYKK081]
gi|380834192|gb|EIC14041.1| phytoene synthase, putative [Kingella kingae PYKK081]
Length = 306
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 20/182 (10%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+CY SF + L T+ RNA+ + Y R LD V DD S + +L
Sbjct: 29 YCYDKAQTSGSSFLAGFKFLSTERRNAMTVLYAFCRELDDVVDDCSDANVARQTLL---- 84
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGY---QDAIEDITKRMGAGMAKFI 155
W K Y+ H V+ A + + QD +EDI M +
Sbjct: 85 -------WWRQDLAKAYQANAMPEHPVNQALQSVTPAFALPQDELEDIINGMEMDLHHV- 136
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
+S DD YCY VAG+VG ++++ + + L + +GL LQ TNIIRD
Sbjct: 137 --RYQSFDDLQYYCYRVAGVVGRLIARILGYANPQTL---QYAEKLGLALQLTNIIRDVG 191
Query: 216 ED 217
ED
Sbjct: 192 ED 193
>gi|124382691|ref|YP_001024936.1| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
10229]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRVRPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 249 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRG 316
K+RRG
Sbjct: 308 SKVRRG 313
>gi|217422870|ref|ZP_03454372.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 576]
gi|217393778|gb|EEC33798.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei 576]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR--- 99
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 13 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 100 -----HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
H R G + + K L++ +L + A+ + + GM
Sbjct: 73 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMS 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD D+ I +C + P+ + +Y + EDL + S +
Sbjct: 192 ERGIRFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPDASLRVRPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN 303
++ +V L H + Y A+ R R C P + + TLAL +N
Sbjct: 249 MHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN 298
>gi|118364555|ref|XP_001015499.1| Squalene and phytoene synthases family protein [Tetrahymena
thermophila]
gi|89297266|gb|EAR95254.1| Squalene and phytoene synthases family protein [Tetrahymena
thermophila SB210]
Length = 332
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 128/296 (43%), Gaps = 46/296 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHRH 100
+L + SR+F + I +L ++ AV YL LRA+D +ED +IP +VK +L ++
Sbjct: 14 ILKETSRTFYIPIVKLVQGVQEAVASAYLCLRAIDEIEDHPNIPNEVKARMLREVSLVCT 73
Query: 101 VYDREWHFSCGTKEY---KVLMDQFHHVSTAFLEL----GKGYQDAIEDITKRMGAGMAK 153
Y E T Y K D+ VS E + I D T M MA
Sbjct: 74 TYSAESTAESLTPTYDNEKEYRDRLPEVSARIGEWIMYSPASIRGRIVDATSGMADRMAT 133
Query: 154 FICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNI 210
+ + + E+ D D Y + VAG VGL LS ++ + GT+ L+ G LQ NI
Sbjct: 134 WAERNWKCETERDLDAYTFAVAGAVGLLLSDIWAWWDGTK--TDRDLAIGFGRGLQSVNI 191
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+R+ ED + F+P+ W+ ++DM A +++
Sbjct: 192 LRNKDEDAE---RGVTFYPKG-WT---------------------VDDMQAYAQRNLQFA 226
Query: 271 LKYMSALRDHA-IFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325
KY+ L+ + FC IP +A+ T N ++ G K+ R K+ ++T
Sbjct: 227 TKYIKDLKPGSPALIFCRIPYNLAVATC----NTLK--SGKEKLSREEVVKICEKT 276
>gi|73542768|ref|YP_297288.1| farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha
JMP134]
gi|72120181|gb|AAZ62444.1| farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha
JMP134]
Length = 350
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 35/302 (11%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P+ A+ +L VSRSF L ++ L +R+ V + YL+ RA DT+ D + I V++
Sbjct: 2 PNPNRAYLLGPLLKGVSRSFYLTLRILPAGMRDPVGLAYLIARAADTIADTSLISPAVRL 61
Query: 92 PILIAFHR---------HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L++ R + DR G + + L++ +L + A
Sbjct: 62 DLLLSLRRCVNGSDDPAQLADRLAREVAGHQTQAKESALLESIRPAFDVLAQLDDADRTA 121
Query: 140 IEDITKRMGAGMAKFICK-----------EVESIDDYDEYCYYVAGLVGLGLSKLFYASG 188
+ I + GM +F + + + D D Y Y VAG VG + + YA
Sbjct: 122 VRGIVTTLTEGM-EFDLRTFPDERSGQLGALPDLSDLDRYTYLVAGCVGEFWTAMTYAHQ 180
Query: 189 TEDLAPDSL-----SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
L DS G LQ N++RD D+ I +C + P ++ ++ + DL
Sbjct: 181 PGVLKEDSTVMHRRGIRFGKALQMVNVLRDCANDLR-IGRC--YLPTDVLGRHGAQPRDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCY 301
NS + L ++V AL H + + Y A+ A+ R C P ++ + TL
Sbjct: 238 LQPANSQRMRPVLFELVRLALDHFREAMAYTLAIPRTAVRLRLACLWPILIGLETLRQLV 297
Query: 302 NN 303
N
Sbjct: 298 RN 299
>gi|167617080|ref|ZP_02385711.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis Bt4]
gi|257140974|ref|ZP_05589236.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis E264]
Length = 349
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++ +
Sbjct: 13 LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72
Query: 103 D-----------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
E + K L++ +L + A+ + + GM
Sbjct: 73 GVPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAAVRGVVTTLTEGM 132
Query: 152 AKFICK-----------EVESIDDYDEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + D Y Y VAG VG +++ A G D+++
Sbjct: 133 -EFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLPGLLSEREDTMA 191
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD +D+ I +C + P+ + S+Y EDL + S +A
Sbjct: 192 ERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLSEYGLCAEDLLRPDASPRARPL 248
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 249 MHALVRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASNDAWLDPAR-A 307
Query: 311 VKMRRGLTAKVI 322
K+RRG ++I
Sbjct: 308 SKVRRGDVYRII 319
>gi|167578978|ref|ZP_02371852.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis TXDOH]
Length = 337
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
ML VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++ +
Sbjct: 1 MLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 60
Query: 102 ----------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
E + K L++ +L + A+ + + GM
Sbjct: 61 GLPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAAVRGVVTTLTEGM 120
Query: 152 AKFICK-----------EVESIDDYDEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + D Y Y VAG VG +++ A G D+++
Sbjct: 121 -EFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLPGLLSEREDTMA 179
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD +D+ I +C + P+ + S+Y +DL + S +A
Sbjct: 180 ERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLSEYGLCAQDLLRPDASPRARPL 236
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 237 MHALVRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASNDAWLDPARA- 295
Query: 311 VKMRRGLTAKVI 322
K+RRG ++I
Sbjct: 296 SKVRRGDVYRII 307
>gi|83717902|ref|YP_440344.1| squalene/phytoene synthase [Burkholderia thailandensis E264]
gi|83651727|gb|ABC35791.1| squalene/phytoene synthase family protein [Burkholderia
thailandensis E264]
Length = 564
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 137/312 (43%), Gaps = 37/312 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++ +
Sbjct: 228 LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 287
Query: 103 D-----------REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
E + K L++ +L + A+ + + GM
Sbjct: 288 GVPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAAVRGVVTTLTEGM 347
Query: 152 AKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLS 198
+F + + ++ ++ D Y Y VAG VG +++ A G D+++
Sbjct: 348 -EFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLPGLLSEREDTMA 406
Query: 199 NS---MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ TN++RD +D+ I +C + P+ + S+Y EDL + S +A
Sbjct: 407 ERGIRFGKALQMTNVLRDCGKDLR-IGRC--YLPQAMLSEYGLCAEDLLRPDASPRARPL 463
Query: 256 LNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGV 310
++ +V L H + Y A+ R R C P + + TLAL +N ++ R
Sbjct: 464 MHALVRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASNDAWLDPAR-A 522
Query: 311 VKMRRGLTAKVI 322
K+RRG ++I
Sbjct: 523 SKVRRGDVYRII 534
>gi|428201150|ref|YP_007079739.1| phytoene/squalene synthetase [Pleurocapsa sp. PCC 7327]
gi|427978582|gb|AFY76182.1| phytoene/squalene synthetase [Pleurocapsa sp. PCC 7327]
Length = 269
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I L + L+ AV YL +RA+D +ED + K +L ++
Sbjct: 10 VLKQTSRTFYIPISLLPSKLQEAVASAYLCMRAIDEIEDCPELDNFTKAKLLRGISLNLQ 69
Query: 103 DRE-----WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
+FS G +Y +L + + L K I D T M MA +
Sbjct: 70 AGTDSSAIEYFSAGLADYILLPEVTLRIGEWALLAPKTIAPRIWDATAAMADRMAYWAEN 129
Query: 158 --EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRDY 214
E+ + D D Y + VAG VGL LS L+ + GT + + + G LQ NIIR+
Sbjct: 130 NWEIHTESDLDRYTFSVAGAVGLLLSDLWAWYDGTR--SDRTCAIGFGRGLQAVNIIRNR 187
Query: 215 LEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED+ S+ VN D +E +M A +++ Y
Sbjct: 188 SEDL---------------SRDVNFFPDGWRDE----------EMHAYAHRNLKLAEGYT 222
Query: 275 SALRDHAIFRFCAIPQIMAIGTL 297
+AL FC IP +A GTL
Sbjct: 223 NALPPGPALDFCKIPLALAYGTL 245
>gi|337749530|ref|YP_004643692.1| squalene/phytoene synthase [Paenibacillus mucilaginosus KNP414]
gi|379722449|ref|YP_005314580.1| squalene/phytoene synthase [Paenibacillus mucilaginosus 3016]
gi|336300719|gb|AEI43822.1| Squalene/phytoene synthase [Paenibacillus mucilaginosus KNP414]
gi|378571121|gb|AFC31431.1| Squalene/phytoene synthase [Paenibacillus mucilaginosus 3016]
Length = 260
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 41/290 (14%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
SML K SR+F + I +L LR AV YL +RA+D +ED + VK +L R
Sbjct: 2 SMLQKTSRTFYIPISRLEQGLREAVTSAYLCMRAIDEIEDHEELDPKVKSELLYGM-REA 60
Query: 102 YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR----MGAGMAKFICK 157
+ T+ V+ E + I + M MA+++ +
Sbjct: 61 FRGPDLKEATTRLLAPYQGILPAVTMQVHEWAQLCPSTIASTVYKYIAMMSEQMAEWVDR 120
Query: 158 E--VESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAPDSLSNSMGLFLQKTNIIRDY 214
+ + + D D Y Y VAG+VG LS L+Y GT+ +++ G LQ NI+R+
Sbjct: 121 KWTIRTEADLDRYTYSVAGMVGEMLSDLWYWYDGTKTDRDKAVAFGRG--LQAVNILRNR 178
Query: 215 LEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED+ + F+P E W N+M+ ++ Y+
Sbjct: 179 GEDLE---RGVDFFP-EGWE---------------------FNEMLQYTRRNLSMADAYI 213
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
+ L+D FC IP +A T+ L + G K+ R K+++R
Sbjct: 214 ADLKDGPALSFCKIPLALAHATVKL------IAGGGNKLTRDAVLKIVNR 257
>gi|295656916|ref|XP_002789036.1| squalene synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285032|gb|EEH40598.1| squalene synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 105
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 8 LRHPDDLYPLLKLKM---ASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
L HP +L +++ K+ + ++++ E C+ L SRSF+ VI +L +L
Sbjct: 11 LFHPQELRSIIQWKVWHNPVHERDEKLETETE-KICFHFLKLTSRSFSAVILELHPELLL 69
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
VC+FYL+LR LDT+EDDTSIP K P+L FH
Sbjct: 70 PVCLFYLILRGLDTIEDDTSIPLKTKEPLLRNFH 103
>gi|17229297|ref|NP_485845.1| hypothetical protein alr1805 [Nostoc sp. PCC 7120]
gi|17130895|dbj|BAB73504.1| alr1805 [Nostoc sp. PCC 7120]
Length = 287
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 114/288 (39%), Gaps = 68/288 (23%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I L L+ AV YL +RA+D +ED ++ K +L +
Sbjct: 21 ILKETSRTFYIPISILPPGLQEAVASAYLCMRAIDEIEDHPTLDNPTKAKLLRGISLTL- 79
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRM--------------- 147
G + V AF GY++ +E++T R+
Sbjct: 80 ------QAGVDGFPV---------DAFAAGFSGYENTLEEVTMRIREWSLLAPETIAPRI 124
Query: 148 ---GAGMAKFICKEVE------SIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSL 197
A M+ + E + D D Y + VAG VGL LS L+ + GT+ +L
Sbjct: 125 WDATAAMSDRMAYWAENNWKIHTESDLDRYTFGVAGAVGLLLSDLWAWYDGTQ--TNRTL 182
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
+ G LQ NI+R+++ED+ + F+P + W N
Sbjct: 183 AIGFGRGLQAVNILRNHVEDLG---RGVSFFP-DGWDA---------------------N 217
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
+M AL ++ Y AL D FC IP +A GT+ N E
Sbjct: 218 NMQEYALRNLALADAYTQALPDGPALNFCQIPLTLAHGTIDAIANGKE 265
>gi|434398212|ref|YP_007132216.1| Squalene/phytoene synthase [Stanieria cyanosphaera PCC 7437]
gi|428269309|gb|AFZ35250.1| Squalene/phytoene synthase [Stanieria cyanosphaera PCC 7437]
Length = 274
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 46/269 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I +L L+ AV YL +RA+D +ED + K +L +
Sbjct: 10 ILKQTSRTFYIPIVRLPGQLQAAVASGYLCMRAIDEIEDHPQLDNSTKAQLLRQISLQLQ 69
Query: 103 DREWHFSCGT------------KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
H S GT E + +D++ ++ + I D T M
Sbjct: 70 QIVNHSSAGTIAQSLSSYQNILPEVTLRLDEWASLAPETIA------PRIWDATAAMADR 123
Query: 151 MAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKT 208
MA + K ++E+ + D Y + VAG VGL LS L +A + + G LQ
Sbjct: 124 MAYWAEKNWQIETEVELDRYTFSVAGAVGLLLSDL-WAWYDNTQTNRTYAIGFGRGLQAV 182
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NIIR++ ED+ + F P+ W+K EDL+ + +H+
Sbjct: 183 NIIRNHSEDLT---RGVNFLPQG-WNK-----EDLQVYARRN--------------LHLA 219
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
D Y L+ FC IP ++A GTL
Sbjct: 220 DL--YTKQLKPGPALDFCQIPLVLAHGTL 246
>gi|427727841|ref|YP_007074078.1| phytoene/squalene synthetase [Nostoc sp. PCC 7524]
gi|427363760|gb|AFY46481.1| phytoene/squalene synthetase [Nostoc sp. PCC 7524]
Length = 276
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHRH 100
+L + SR+F + I L L+ AV YL +RA+D +ED + K +L I+
Sbjct: 10 ILEQTSRTFYIPISILPPGLQEAVASAYLCMRAIDEIEDHPELDNSTKAKLLNMISLTLQ 69
Query: 101 VYDREW---HFSCGTKEYKVLMDQFH-HVSTAFLELGKGYQDAIEDITKRMGAGMAKF-- 154
+ F+ G Y+ ++++ + L + I D T M MA +
Sbjct: 70 TGVDGFPVDAFTAGFSGYEDILEEVTLRIREWSLLAPETIAPRIWDATAAMSDRMAHWAE 129
Query: 155 ICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
I +V + D D Y + VAG VGL LS L+ + GT+ ++ G LQ NI+R+
Sbjct: 130 INWKVHTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQTNRTQAI--GFGRGLQAVNILRN 187
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
++ED+ + F+P + WS + +M AL ++ Y
Sbjct: 188 HVEDLG---RGVSFFP-DGWS---------------------VANMQEYALRNLALADAY 222
Query: 274 MSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
S L + +FC IP +A GTL N E
Sbjct: 223 TSNLPNGPALQFCQIPLALAHGTLEALANGKE 254
>gi|315647262|ref|ZP_07900375.1| Squalene/phytoene synthase [Paenibacillus vortex V453]
gi|315277464|gb|EFU40793.1| Squalene/phytoene synthase [Paenibacillus vortex V453]
Length = 267
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 60/304 (19%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
+ML K SR+F + I L LR AV YL +RA+D +ED + ++K+ +L R +
Sbjct: 6 TMLKKTSRTFYIPISYLELGLREAVASAYLCMRAIDEIEDHHELSNELKIELL----RGI 61
Query: 102 YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED---------------ITKR 146
Y+ + +++ ++ + Q H V + + + +++ T +
Sbjct: 62 YE-----TFKSQDDRMGVPQAHIVLSPYRTVLPDVTMQLDEWAALCPPTAAPIVYRYTAK 116
Query: 147 MGAGMAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGL 203
M MA ++ + + +D D+Y Y VAG+VG LS+L+ + GT+ +++ G
Sbjct: 117 MSLHMADWVQHGWNIHTEEDLDKYTYSVAGMVGEMLSELWLWYDGTQSDLTKAIAFGRG- 175
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
LQ NI+R+ ED+ + F+P + W +M
Sbjct: 176 -LQAVNILRNREEDLK---RGVDFYP-DGWG---------------------FKEMQQYT 209
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVID 323
+++ Y++ L+ +FC IP +A T+ L + G K+ R K+++
Sbjct: 210 RRNLQTADSYVADLKHGPALKFCKIPLALAHATVNL------ISAGGSKLTRDAVLKIVN 263
Query: 324 RTNN 327
R
Sbjct: 264 RVTG 267
>gi|407960344|dbj|BAM53584.1| hypothetical protein BEST7613_4653 [Synechocystis sp. PCC 6803]
Length = 271
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 111/264 (42%), Gaps = 36/264 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHRH 100
+L + SR+F + I L L +AV YL +RA+D VED + + K IL I+ +
Sbjct: 10 VLQETSRTFYIPISILPDQLLDAVASAYLCMRAIDEVEDHPDLDAETKARILNQISLNLQ 69
Query: 101 VYDREWH---FSCGTKEYKVLMDQFH-HVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
H F G Y+ L+ + V L + + D T M MA +
Sbjct: 70 SATENSHSEDFIRGLDPYRNLLPEVTLRVGEWALLAPESIAPRVWDATAAMSDRMAFWAL 129
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ ++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI+R+
Sbjct: 130 QNWQIRTESELDQYTFSVAGAVGLLLSDLWAWHDGTQ--TNRSHAIGFGRGLQAVNIVRN 187
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
Y ED + F+P+ W L DM A ++ +Y
Sbjct: 188 YKEDKR---RGVSFFPQG-WE---------------------LADMHKYARYNLALADQY 222
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 223 TKSLPHGPALNFCKIPLTLAYGTL 246
>gi|170690690|ref|ZP_02881856.1| Squalene/phytoene synthase [Burkholderia graminis C4D1M]
gi|170143939|gb|EDT12101.1| Squalene/phytoene synthase [Burkholderia graminis C4D1M]
Length = 348
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 33 PEPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P P AF +L VSRSF L ++ L +R+ + + YL+ RA DT+ D + I + ++
Sbjct: 2 PTPTRAFLLGPLLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLIAPEQRL 61
Query: 92 PILIAFHRHV---------YDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L++ + + R G + + K+L++ +L + ++A
Sbjct: 62 QLLLSLRDQINGAANDGALFQRMAAEVAGQQSQSDEKLLLESLGPALDVLTQLSEPDRNA 121
Query: 140 IEDITKRMGAGMAKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA-- 186
+ I + GM +F + + ++ +Y D Y Y VAG VG + + YA
Sbjct: 122 VRAIVSTLTEGM-EFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTTMTYAHM 180
Query: 187 SGTEDLAPDSLSN---SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
GT PD ++ G LQ TN++RD +D+ R + P+ + ++ +DL
Sbjct: 181 PGTLKERPDIMAARGVRFGKALQMTNVLRDCGKDLR---IGRSYLPQTMLEQHGLSPQDL 237
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
NS +A + +++ L H + L Y A+
Sbjct: 238 LLPANSLRARPLMVELLRKTLDHFREALDYTLAI 271
>gi|16332021|ref|NP_442749.1| hypothetical protein sll0513 [Synechocystis sp. PCC 6803]
gi|383323764|ref|YP_005384618.1| hypothetical protein SYNGTI_2856 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326933|ref|YP_005387787.1| hypothetical protein SYNPCCP_2855 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492817|ref|YP_005410494.1| hypothetical protein SYNPCCN_2855 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384438085|ref|YP_005652810.1| hypothetical protein SYNGTS_2857 [Synechocystis sp. PCC 6803]
gi|451816173|ref|YP_007452625.1| hypothetical protein MYO_128830 [Synechocystis sp. PCC 6803]
gi|1001333|dbj|BAA10820.1| sll0513 [Synechocystis sp. PCC 6803]
gi|339275118|dbj|BAK51605.1| hypothetical protein SYNGTS_2857 [Synechocystis sp. PCC 6803]
gi|359273084|dbj|BAL30603.1| hypothetical protein SYNGTI_2856 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359276254|dbj|BAL33772.1| hypothetical protein SYNPCCN_2855 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279424|dbj|BAL36941.1| hypothetical protein SYNPCCP_2855 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451782142|gb|AGF53111.1| hypothetical protein MYO_128830 [Synechocystis sp. PCC 6803]
Length = 277
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 111/264 (42%), Gaps = 36/264 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHRH 100
+L + SR+F + I L L +AV YL +RA+D VED + + K IL I+ +
Sbjct: 16 VLQETSRTFYIPISILPDQLLDAVASAYLCMRAIDEVEDHPDLDAETKARILNQISLNLQ 75
Query: 101 VYDREWH---FSCGTKEYKVLMDQFH-HVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
H F G Y+ L+ + V L + + D T M MA +
Sbjct: 76 SATENSHSEDFIRGLDPYRNLLPEVTLRVGEWALLAPESIAPRVWDATAAMSDRMAFWAL 135
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ ++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI+R+
Sbjct: 136 QNWQIRTESELDQYTFSVAGAVGLLLSDLWAWHDGTQ--TNRSHAIGFGRGLQAVNIVRN 193
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
Y ED + F+P+ W L DM A ++ +Y
Sbjct: 194 YKEDKR---RGVSFFPQG-WE---------------------LADMHKYARYNLALADQY 228
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 229 TKSLPHGPALNFCKIPLTLAYGTL 252
>gi|330821919|ref|YP_004350781.1| Squalene/phytoene synthase family protein [Burkholderia gladioli
BSR3]
gi|327373914|gb|AEA65269.1| Squalene/phytoene synthase family protein [Burkholderia gladioli
BSR3]
Length = 356
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 31/289 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L + L +R+ + + YL+ RA DT+ D + +P ++ L++ V
Sbjct: 13 LLKGVSRSFYLTLAVLPVGMRDPIGLAYLLARAADTIADTSLLPPARRLEWLLSLRAQVN 72
Query: 103 DR-----------EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
R E + KVL++ +L + A+ I + GM
Sbjct: 73 GRPDEAALRSIAAEVAGQQTDSDEKVLLESLGPALGILAQLDDADRAAVRGIVTTLSEGM 132
Query: 152 A--------KFICKEVESIDD--YDEYCYYVAGLVGLGLSKL--FYASGTEDLAPD---S 196
+ + V DD D Y Y VAG VG + + + G D +
Sbjct: 133 EFDLVTFPDETSGQLVALPDDAALDRYTYMVAGCVGEFWTTMTFLHEPGVVKRDADEMKA 192
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
L G LQ TN++RD +D+ I +C + P + ++ DL ++ S A +
Sbjct: 193 LGIRFGKALQLTNVLRDAAKDLR-IGRC--YLPADRLARGRIAPGDLLGQDASQLARPVM 249
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
D+V AL H + Y A+ A+ R C P ++ + TL L +N
Sbjct: 250 FDLVRVALAHYRAGIDYTFAIPPRAMRLRLACIWPIVIGLMTLRLLVSN 298
>gi|186474231|ref|YP_001861573.1| squalene/phytoene synthase [Burkholderia phymatum STM815]
gi|184196563|gb|ACC74527.1| Squalene/phytoene synthase [Burkholderia phymatum STM815]
Length = 351
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 42/295 (14%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D IP P
Sbjct: 13 LLKGVSRSFYLTLRILPVGMRDPIGLAYLLARAADTIADTALIP-----PEQRLALLLAL 67
Query: 103 DREWHFSCGTKEY-----------------KVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
+ + + G E+ KVL++ +L + A+ +I
Sbjct: 68 REQVNGATGDGEFARRLASEVAGQQTQSDEKVLLESIAPALDVLSQLDDADRAAVREIVT 127
Query: 146 RMGAGM----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD 195
+ GM + + D+ D Y Y VAG VG +K+ YA L
Sbjct: 128 TLTTGMEFDLRTFPDEGSGQIVALRTWDELDRYTYLVAGCVGEFWTKMTYAHLPGTLKTG 187
Query: 196 SLSN-----SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSD 250
S++ G LQ TN++RD +D+ I +C + P + ++ + L + S
Sbjct: 188 SVTMLERGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPSVMLDRFGLTPQMLLDPQASK 244
Query: 251 KAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
+A ++++V +L H L Y A+ ++ R C P ++ + TL L +N
Sbjct: 245 RAQPLMHELVRKSLDHFRAALDYTLAIPRFSLRLRLACMWPIVIGLETLLLLVDN 299
>gi|196228388|ref|ZP_03127255.1| Squalene/phytoene synthase [Chthoniobacter flavus Ellin428]
gi|196227791|gb|EDY22294.1| Squalene/phytoene synthase [Chthoniobacter flavus Ellin428]
Length = 345
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 50/331 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L I+ L + LR V + YL+ RA DT+ D +P ++ L +F R +
Sbjct: 12 LLASVSRSFYLSIRLLPSKLRAPVGLAYLLARASDTIADSPEVPEATRLHHLASFARMIR 71
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFL-ELGKGYQ--------------DAIEDITKRM 147
+ + G E + + H T L L + Q D +E I +
Sbjct: 72 TGK---TDGLAELQQDIHTTHAGETMLLCNLDRCLQWLEHVDNKDRSEIVDVLERIIRGQ 128
Query: 148 GAGMAKFICKEV-----ESIDDYDEYCYYVAGLVG-----LGLSKLFYAS--GTEDLAPD 195
+ +F V +S ++ DEY Y VAG VG + L+ L S G DL
Sbjct: 129 TLDLERFSVGGVHVVALQSAEELDEYTYLVAGCVGEFWTRVCLNHLPGCSSLGLADL--R 186
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
L G LQ NI+RD+ ED+ +C + P E+ + + L + KA
Sbjct: 187 KLGEEYGKGLQLVNILRDFTEDLRN-GRCYLPEP-ELRAAGTSPTPLL---DAPVKAQPV 241
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMR 314
+ + A ++ +Y+S LR + C +P + + TL L + + G VK+
Sbjct: 242 YDRWLERATQQLDAGYEYISTLRSARLRMACFLPWYIGLRTLRLLAKPGTLTKPGKVKVS 301
Query: 315 RGLTAKVIDRTNNMTDVYLAFYDFSNILKPK 345
R MT + Y ++ PK
Sbjct: 302 R------------MTVRFAFIYALASAFSPK 320
>gi|403521603|ref|YP_006657172.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei BPC006]
gi|403076670|gb|AFR18249.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei BPC006]
Length = 333
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 37/302 (12%)
Query: 47 VSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR------- 99
+SRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 1 MSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINGAPD 60
Query: 100 -HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
H R G + + K L++ +L + A+ + + GM +F
Sbjct: 61 PHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSASDRAAVRGVVTTLTEGM-EFD 119
Query: 156 CK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLSNS-- 200
+ + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 120 LRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGI 179
Query: 201 -MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A ++ +
Sbjct: 180 RFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 236
Query: 260 VTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGVVKMR 314
V L H + Y A+ R R C P + + TLAL +N ++ R K+R
Sbjct: 237 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-ASKVR 295
Query: 315 RG 316
RG
Sbjct: 296 RG 297
>gi|75911004|ref|YP_325300.1| farnesyl-diphosphate farnesyltransferase [Anabaena variabilis ATCC
29413]
gi|75704729|gb|ABA24405.1| farnesyl-diphosphate farnesyltransferase [Anabaena variabilis ATCC
29413]
Length = 276
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI--PTDVKVPILIAFHRH 100
+L SR+F + I L + L+ AV YL +RA+D +ED ++ PT K+ I+
Sbjct: 10 ILKDTSRTFYIPISILPSGLQEAVASAYLCMRAIDEIEDHPTLDNPTKAKLLRGISLTLQ 69
Query: 101 VYDREW---HFSCGTKEYK-VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ F+ G Y+ L + + L + I D T M MA +
Sbjct: 70 AGVDGFPVDAFAAGFSGYENTLAEVTMRIREWSLLAPETIAPRIWDATAAMSDRMAYWAE 129
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + D D Y + VAG VGL LS L+ + GT+ +L+ G LQ NI+R+
Sbjct: 130 NNWKIYTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQ--TNRTLAIGFGRGLQAVNILRN 187
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
++ED+ + F+P + W N+M AL ++ Y
Sbjct: 188 HVEDLG---RGVSFFP-DGWDA---------------------NNMQEYALRNLALADAY 222
Query: 274 MSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
AL D FC IP +A GT+ N E
Sbjct: 223 TQALPDGPALNFCQIPLTLAHGTIDAIANGKE 254
>gi|420256584|ref|ZP_14759422.1| phytoene/squalene synthetase [Burkholderia sp. BT03]
gi|398042941|gb|EJL35891.1| phytoene/squalene synthetase [Burkholderia sp. BT03]
Length = 351
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D IP + ++ +L+A V
Sbjct: 13 LLKGVSRSFYLTLRILPAGMRDPIGLAYLLARAADTIADTALIPPEQRLALLLALRDQVN 72
Query: 102 --------YDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
R + G + + KVL++ +L + A+ +I + G
Sbjct: 73 GATDDGELAQRLANEVAGQQTQSDEKVLLESIAPALDVLQQLDAADRAAVREIVTTLTTG 132
Query: 151 MAKFICK-----------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN 199
M +F + + ++ D Y Y VAG VG +K+ YA L D +
Sbjct: 133 M-EFDLRTFPDERSGRIVALREWEELDRYTYLVAGCVGEFWTKMTYAHLPGTLKTDEPTM 191
Query: 200 -----SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
G LQ TN++RD +D+ I +C + P + +Y + L + S +A
Sbjct: 192 LERGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPSAMLDRYGLTPQMLLEPQASQRAQP 248
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
++++V +L H L Y A+ ++ R C P ++ + T+ L +N
Sbjct: 249 LMHELVRKSLDHFRAALDYTLAIPRFSLRLRLACVWPIVIGLETMLLLVDN 299
>gi|386725209|ref|YP_006191535.1| squalene/phytoene synthase [Paenibacillus mucilaginosus K02]
gi|384092334|gb|AFH63770.1| squalene/phytoene synthase [Paenibacillus mucilaginosus K02]
Length = 258
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
ML K SR+F + I +L LR AV YL +RA+D +ED + VK +L R +
Sbjct: 1 MLQKTSRTFYIPISRLEQGLREAVTSAYLCMRAIDEIEDHEELDPKVKSELLYGM-REAF 59
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR----MGAGMAKFICKE 158
T+ V+ E + I + M MA+++ ++
Sbjct: 60 RGPDLKEATTRLLAPYQGILPAVTMQVHEWAQLCPSTIASTVYKYIAMMSEQMAEWVDRK 119
Query: 159 --VESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
+ + D D Y Y VAG+VG LS L+Y GT+ +++ G LQ NI+R+
Sbjct: 120 WTIRTEADLDRYTYSVAGMVGEMLSDLWYWYDGTKTDRDKAVAFGRG--LQAVNILRNRG 177
Query: 216 EDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMS 275
ED+ + F+P E W N+M+ ++ Y++
Sbjct: 178 EDLE---RGVDFFP-EGWE---------------------FNEMLQYTRRNLSMADAYIA 212
Query: 276 ALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
L+D FC IP +A T+ L + G K+ R K+++R
Sbjct: 213 DLKDGPALSFCKIPLALAHATVKL------IAGGGNKLTRDAVLKIVNR 255
>gi|226194814|ref|ZP_03790406.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|225933158|gb|EEH29153.1| squalene/phytoene synthase family protein [Burkholderia
pseudomallei Pakistan 9]
Length = 333
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 37/302 (12%)
Query: 47 VSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR------- 99
+SRSF L ++ L +R+ + + YL+ RA DT+ D + IP ++ +L++
Sbjct: 1 MSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINGAPD 60
Query: 100 -HVYDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
H R G + + K L++ +L + A+ + + GM +F
Sbjct: 61 PHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM-EFD 119
Query: 156 CK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYA--SGTEDLAPDSLSNS-- 200
+ + ++ ++ D Y Y VAG VG +K+ A G D++S
Sbjct: 120 LRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGI 179
Query: 201 -MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
G LQ TN++RD D+ I +C + P+ + +Y + EDL S +A ++ +
Sbjct: 180 RFGKALQMTNVLRDCGRDLR-IGRC--YLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 236
Query: 260 VTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNN---IEVFRGVVKMR 314
V L H + Y A+ R R C P + + TLAL +N ++ R K+R
Sbjct: 237 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPAR-ASKVR 295
Query: 315 RG 316
RG
Sbjct: 296 RG 297
>gi|390576425|ref|ZP_10256488.1| squalene/phytoene synthase [Burkholderia terrae BS001]
gi|389931618|gb|EIM93683.1| squalene/phytoene synthase [Burkholderia terrae BS001]
Length = 351
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L VSRSF L ++ L +R+ + + YL+ RA DT+ D IP + ++ +L+A V
Sbjct: 13 LLKGVSRSFYLTLRILPAGMRDPIGLAYLLARAADTIADTALIPPEQRLALLLALRDQVN 72
Query: 102 --------YDREWHFSCGTK---EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
R + G + + KVL++ +L + A+ +I + G
Sbjct: 73 GATDDGELAQRLANEVAGQQTQSDEKVLLESIAPALDVLQQLDAADRAAVREIVTTLTTG 132
Query: 151 MAKFICK-----------EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN 199
M +F + + ++ D Y Y VAG VG +K+ YA L D +
Sbjct: 133 M-EFDLRTFPDERSGRIVALHEWEELDRYTYLVAGCVGEFWTKMTYAHLPGTLKTDEPTM 191
Query: 200 -----SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
G LQ TN++RD +D+ I +C + P + +Y + L + S +A
Sbjct: 192 LERGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPSAMLDRYGLTPQMLLEPQASQRAQP 248
Query: 255 CLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
++++V +L H L Y A+ ++ R C P ++ + T+ L +N
Sbjct: 249 LMHELVRKSLDHFRAALDYTLAIPRFSLRLRLACVWPIVIGLETMLLLVDN 299
>gi|339321517|ref|YP_004680411.1| farnesyl-diphosphate farnesyltransferase [Cupriavidus necator N-1]
gi|338168125|gb|AEI79179.1| farnesyl-diphosphate farnesyltransferase [Cupriavidus necator N-1]
Length = 348
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 34 EPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVP 92
+P AF +L VSRSF L ++ L +R+ V + YL+ RA DT+ D + IP ++
Sbjct: 3 DPSRAFLLGPLLKGVSRSFYLTLRVLPVHMRDPVGLAYLLARAADTIADTSLIPPQRRLT 62
Query: 93 ILIAFHRHV----YDREWHFSCGTK--------EYKVLMDQFHHVSTAFLELGKGYQDAI 140
+L++ V D S T+ + ++L+ +L Q A+
Sbjct: 63 LLLSLRDQVNGATADSALADSIATEVAGRQEQSDERILLQSLGPALALLAQLEPDDQQAV 122
Query: 141 EDITKRMGAGM-----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189
I + GM A I E + D Y Y VAG VG F+ S T
Sbjct: 123 RQIVSTLTEGMEFDLRTFPDEHAGRIVALGEP-EALDRYTYLVAGCVG-----EFWTSMT 176
Query: 190 EDLAPDSL--SNSM-------GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL 240
P ++ ++M G LQ TN++RD +D+ I +C + P + ++
Sbjct: 177 AAHVPGAIRVPDAMLRRGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPATMLHQHGLSP 233
Query: 241 EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLA 298
+DL + S +A + ++V + L H + + Y A+ H I R C P ++ + TL
Sbjct: 234 QDLLLPDASLRARALMLELVHDTLDHFHEAMAYTLAIPPHFIRLRLACLWPVLIGMETLL 293
Query: 299 LCYNN 303
L N
Sbjct: 294 LLVRN 298
>gi|188592055|ref|YP_001796653.1| squalene/phytoene synthase [Cupriavidus taiwanensis LMG 19424]
gi|170938429|emb|CAP63416.1| putative Squalene/phytoene synthase [Cupriavidus taiwanensis LMG
19424]
Length = 348
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 47/297 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP---------------- 86
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D I
Sbjct: 13 LLKGVSRSFYLTLRVLPARMRDPVGLAYLLARAADTIADTALIAPERRLALLLSLREQVN 72
Query: 87 -TDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
+ + + F V R+ + ++L++ H A +L + A+ I
Sbjct: 73 GVNARAASMPDFAAEVASRQEQ-----SDERILLESVEHALAALAQLEPADRTAVRQIVS 127
Query: 146 RMGAGM-----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYA------SG 188
+ GM A I + +++ D Y Y VAG VG +++ A
Sbjct: 128 TLTEGMEFDLRTFPDERAGHIVS-LRKVEELDHYTYLVAGCVGEFWTRMAAAHMQGAIGD 186
Query: 189 TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEEN 248
TE + + G LQ TN++RD +D+ I +C + P+ + ++ +DL +
Sbjct: 187 TETMLRHGI--RFGKALQMTNVLRDCGKDLR-IGRC--YLPQTMLERHGLHAQDLLRPDA 241
Query: 249 SDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTLALCYNN 303
S +A + ++V + L H + L Y A+ + R C P ++ + TL N
Sbjct: 242 STRARPLMFELVRHTLEHFDQALAYTLAIPARFVRLRLACLWPVLIGMETLKRLVRN 298
>gi|440683002|ref|YP_007157797.1| farnesyl-diphosphate farnesyltransferase [Anabaena cylindrica PCC
7122]
gi|428680121|gb|AFZ58887.1| farnesyl-diphosphate farnesyltransferase [Anabaena cylindrica PCC
7122]
Length = 287
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 113/270 (41%), Gaps = 48/270 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L + SR+F + I L + L+ AV YL +RA+D +ED + K +L + R +
Sbjct: 21 ILRETSRTFYIPISTLPSGLQEAVASAYLCMRAIDEIEDHPELDNVTKSHLLRSISRTLQ 80
Query: 102 -------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELG----KGYQDAIEDITKRMGAG 150
D FS G + Y+ D VS E + I D T M
Sbjct: 81 AGVDGFAVD---AFSLGFRGYE---DSLAEVSLRVREWSILAPESIAPRIWDATAAMADR 134
Query: 151 MAKF--ICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQK 207
MA + I ++ + D D Y + VAG VGL LS L+ + GTE ++ G LQ
Sbjct: 135 MADWAEINWKIATESDLDRYTFGVAGAVGLLLSDLWSWYDGTETNRTQAI--GFGRGLQA 192
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI+R+ ED+ + F+P E W N+D Q A ++
Sbjct: 193 VNILRNNTEDLT---RGVDFFP-EGW--------------NNDNLQQY-------ARRNL 227
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y S+L +FC IP +A GTL
Sbjct: 228 ALADAYTSSLPAGPALQFCQIPLALAHGTL 257
>gi|218438865|ref|YP_002377194.1| squalene/phytoene synthase [Cyanothece sp. PCC 7424]
gi|218171593|gb|ACK70326.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7424]
Length = 270
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 127/312 (40%), Gaps = 76/312 (24%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L+ AV YL +RA+D VED ++ K IL
Sbjct: 9 TILKETSRTFYIPISRLPDKLQEAVASAYLCMRAIDEVEDHKTLDNFTKARIL------- 61
Query: 102 YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMG------------- 148
R+ + +D F S+ L +QD + ++T R+G
Sbjct: 62 --RQISLNLQAAAENTTVDNF---SSGLL----SHQDVLPEVTIRLGEWALLAPETIAPR 112
Query: 149 -----AGMAKFIC------KEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDS 196
A MA + ++E++ D D Y + VAG VGL LS L+ + GT+ +
Sbjct: 113 IWDATAAMADRMAYWAENNWKIETVTDLDRYTFSVAGAVGLLLSDLWGWYDGTQ--TNRT 170
Query: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
+ G LQ NI R++ ED+ + F+P + + EE
Sbjct: 171 YAIGFGRGLQAVNIARNHSEDLR---RGVDFFP-----------DGWRAEE--------- 207
Query: 257 NDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFR-GVVKMRR 315
M A +++ Y +L D FC IP LAL Y +EV G K+ R
Sbjct: 208 --MHAYARHNLKLADYYTKSLPDGPALDFCKIP-------LALAYGTLEVLALGKEKLSR 258
Query: 316 GLTAKVIDRTNN 327
++ + N+
Sbjct: 259 SDVMALVQQVNH 270
>gi|116694163|ref|YP_728374.1| farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha H16]
gi|113528662|emb|CAJ95009.1| Farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha H16]
Length = 354
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 45/306 (14%)
Query: 34 EPHWAFCYS-MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVP 92
EP AF +L VSRSF L ++ L +R+ V + YL+ RA DT+ D + IP ++
Sbjct: 3 EPSRAFLLGPLLKGVSRSFYLTLRVLPERMRDPVGLAYLLARAADTIADTSLIPPQRRLA 62
Query: 93 ILIAFHRHV----YDREWHFSCGTK---------EYKVLMDQFHHVSTAFLELGKGYQDA 139
+L++ V D S T+ + ++L++ +L + A
Sbjct: 63 LLLSLRDQVNGATADTALADSIATEVAGRQEQQSDERILLESLGPALAVLAQLEPDDRQA 122
Query: 140 IEDITKRMGAGM-----------AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASG 188
+ I + GM A I E ++ D Y Y VAG VG F+ S
Sbjct: 123 VRQIVSTLSEGMEFDLRTFPDENAGRIVALREP-EELDRYTYLVAGCVG-----EFWTSM 176
Query: 189 TEDLAPDSLSNS---------MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNK 239
T P ++ G LQ TN++RD +D+ I +C + P + ++
Sbjct: 177 TAAHMPGAIGKPDAMLRRGVRFGKALQMTNVLRDCGKDLR-IGRC--YLPATMLHQHGLS 233
Query: 240 LEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF-CAIPQIMAIGTL 297
+DL + S +A + ++V L H + + Y A+ I R C P ++ + TL
Sbjct: 234 PQDLLLADASPRARALMLELVRKTLDHFCEAMTYTLAIHPRFIRLRLACLWPVLIGMETL 293
Query: 298 ALCYNN 303
L N
Sbjct: 294 LLLVRN 299
>gi|443326268|ref|ZP_21054928.1| phytoene/squalene synthetase [Xenococcus sp. PCC 7305]
gi|442794125|gb|ELS03552.1| phytoene/squalene synthetase [Xenococcus sp. PCC 7305]
Length = 268
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 41 YSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH 100
+ +L + SR+F + I L +LR AV YL +RA+D +ED + + K+ +L + +
Sbjct: 8 WEILKQTSRTFYIPINSLPKELRKAVTSAYLCMRAIDDIEDSDLLDSKTKIQLLRSISLN 67
Query: 101 VYDREWHFSCGTKEYKVLMDQFHH----VSTAFLELG----KGYQDAIEDITKRMGAGMA 152
+ + H+S + + + H VS E + I D T M MA
Sbjct: 68 LQSQ--HYSNAQDLFSEDLAYYSHNLPEVSLRIKEWSLLAPQAIAPRIWDATAAMADRMA 125
Query: 153 KFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTN 209
++ + ++ + D D Y + VAG VGL LS ++ + GT + + G LQ N
Sbjct: 126 YWVEQDWQINTRADLDRYTFSVAGSVGLLLSDIWGWYDGT--VTNRDHAIGFGRGLQAVN 183
Query: 210 IIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
I+R+ ED++ + F+P + W + +E + +Q N
Sbjct: 184 IMRNRQEDLS---RGVDFFPHD-WDMAM-------MQEYTRSQLQLAN------------ 220
Query: 270 CLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y+ AL + FC IP +A TL
Sbjct: 221 --LYIEALSESPALDFCRIPLTLAYATL 246
>gi|32526538|emb|CAD39195.1| squalene synthase [Stigmatella aurantiaca]
Length = 328
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 104 REWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVE--- 160
R S G+ L+ + V F L + Q I + M GMA + +++E
Sbjct: 66 RAMAASDGSGAEARLLQRTGTVLETFAALPEWTQPPIARCVRAMADGMAD-VSRDLERAP 124
Query: 161 ---SIDDYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDS-----LSNSMGLFLQKTN 209
+ D + YCYYVAG VG L+ LF + LA L+ + G LQ N
Sbjct: 125 PASGLRDLEATLTYCYYVAGTVGEMLTDLFIGFAPQ-LAGQGKELRRLAPAXGRALQLIN 183
Query: 210 IIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
I++D ED+ + + PR + + + L EN +AV LN+MV A +
Sbjct: 184 ILKDIREDLE---RGYCWLPRTVMAAHGLTARTLLNPENRGRAVGMLNEMVAVARREADV 240
Query: 270 CLKYMSALR---DHAIFR-FCAIPQIMAIGTLALCYNNIEVF 307
L+Y ALR D R FC P A+ +L+ NN VF
Sbjct: 241 SLEY--ALRLPVDEPGLRLFCLWPLFFAVLSLSRLENNPAVF 280
>gi|448505127|ref|ZP_21614189.1| Squalene/phytoene synthase [Halorubrum distributum JCM 9100]
gi|445700515|gb|ELZ52508.1| Squalene/phytoene synthase [Halorubrum distributum JCM 9100]
Length = 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 36/262 (13%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGT-KEYKVLMD---- 120
+C+ YL+ R DT+ED + + +V +L F +Y S GT E++ +D
Sbjct: 5 ICLGYLLCRVADTIEDAGHVSPESQVKLLRTFDAALYP----ASNGTMNEFRAAVDGWLP 60
Query: 121 -------------QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVES----ID 163
Q + F + Q A+ + + M GMA F+ + ++ I+
Sbjct: 61 PSADRSADWSVVAQSPTIWATFTNQPESVQTAVIPLVREMVDGMAMFVERYADTGGLRIN 120
Query: 164 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLED 217
D E YCYY AG VG ++ L L ++ GL LQ N+ +D +D
Sbjct: 121 DRSELEQYCYYAAGTVGRLITNLLTRGNVSQKRAQRLYDTADEFGLLLQMVNVSKDVYDD 180
Query: 218 INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA- 276
E + ++ P E + E + +N + A + + A ++D Y+ A
Sbjct: 181 YTE--ENNVYLPAEWLADEGIDQESILRTDNREPAANVVERTASYAGTFLDDAQTYIEAM 238
Query: 277 -LRDHAIFRFCAIPQIMAIGTL 297
L +IP ++ +GT+
Sbjct: 239 PLTHGNTMAAWSIPYLLGVGTI 260
>gi|145588377|ref|YP_001154974.1| squalene/phytoene synthase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046783|gb|ABP33410.1| farnesyl-diphosphate farnesyltransferase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E ++ ++L VSR+FAL I L D+ V YL+ R +DT+ED + +K +
Sbjct: 13 ESDLSYQKAILGSVSRTFALTIPLLPPDIEIVVGNTYLLCRIVDTIEDAADLSPQIKQDL 72
Query: 94 LIAFHRHVYDRE-------------WHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
F V ++ H+ G + L+ V Q A+
Sbjct: 73 SKLFLDAVLEKSPVETFVEPCLTHLRHY--GNSDELDLIANTPTVLRILHTCSANDQAAV 130
Query: 141 EDITKRMGAGMAKFICKEVES----IDDYDEYCYYVAGLVGLGLSKLF----YASGTEDL 192
M GM++F K+ E+ + +++EYCY VAG+VG L+ +F A +
Sbjct: 131 SRCVSIMSEGMSRFHGKQNEAGLKNLTEFEEYCYVVAGVVGELLTTIFSNHSQAFTKNIV 190
Query: 193 APDSLSNSMGLFLQKTNIIRDYLED 217
+ L+ + G LQ TNI++D ED
Sbjct: 191 GHEELAIAFGQALQMTNILKDSPED 215
>gi|383457481|ref|YP_005371470.1| squalene/phytoene synthase [Corallococcus coralloides DSM 2259]
gi|380730420|gb|AFE06422.1| squalene/phytoene synthase [Corallococcus coralloides DSM 2259]
Length = 323
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 118/299 (39%), Gaps = 58/299 (19%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L + SR+FAL I L LR V + YL+LR DT+ED D + L AF + +
Sbjct: 21 LVRTSRTFALAIPLLDEPLRREVGLGYLLLRVADTLEDAAPWSRDERREALAAFEALLQE 80
Query: 104 ----------REWHFSCGTKEYKVLMDQFHHVSTAFLEL-------GKGYQDAIEDITKR 146
REW + E +D T L G + + +
Sbjct: 81 KPGTDAGALSREW-LARRPSENAGYLDLLARTPTLLASLDALRPEAGAILRHFVLKTVQG 139
Query: 147 MG---AGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLF--------YASGTEDLAPD 195
MG AG ++ ++ S+ +YCY VAGLVG L++LF YA LAP
Sbjct: 140 MGQVLAGASEGGLLKLGSLQSLRDYCYIVAGLVGELLTELFVLDPRLAPYAPNLRSLAP- 198
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
G LQ NI++D +D E R++ P + + V +L
Sbjct: 199 ----LFGEGLQLVNILKDARQDRKE---GRVWLPDGVQLQDVEQLAG------------- 238
Query: 256 LNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNN---IEVFRGVV 311
D++ A L A RD + F +P ++A TL L + +V R VV
Sbjct: 239 -QDLIAAA--RYVRSLFLAGAPRD--MLAFTTLPLLLAQATLELLVRDGAGAKVSRAVV 292
>gi|282901297|ref|ZP_06309223.1| Squalene/phytoene synthase [Cylindrospermopsis raciborskii CS-505]
gi|281193792|gb|EFA68763.1| Squalene/phytoene synthase [Cylindrospermopsis raciborskii CS-505]
Length = 275
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 48/278 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L + SR+F + I + + L+ AV YL +RA+D +ED ++ K +L + + +
Sbjct: 10 ILKETSRTFYIPISIMPSGLQEAVASAYLCMRAIDEIEDHPTLENHTKGILLQSISQTLQ 69
Query: 102 -------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELG----KGYQDAIEDITKRMGAG 150
D FS G K Y+ D VS E + I D T M
Sbjct: 70 AGVDGFAVDA---FSMGFKGYE---DSLPEVSVRIREWAILAPESIAPRIWDATAAMADR 123
Query: 151 MAKF--ICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQK 207
MA + I ++++ D D Y + VAG VGL LS L+ + GT +++ + G LQ
Sbjct: 124 MAYWSQINWQIKNEYDLDRYTFGVAGAVGLLLSDLWSWYDGTTTNRMEAI--AFGRGLQA 181
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI+R+ ED+ + F+P E W+ D+ A H+
Sbjct: 182 VNILRNNSEDLT---RGVNFFP-EGWNH---------------------QDLQQYARRHL 216
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
Y ++L +FC IP +A GTL N E
Sbjct: 217 ALADSYTNSLPPGPALQFCQIPLALAHGTLDALANGKE 254
>gi|225872471|ref|YP_002753926.1| phytoene desaturase [Acidobacterium capsulatum ATCC 51196]
gi|225792345|gb|ACO32435.1| phytoene desaturase [Acidobacterium capsulatum ATCC 51196]
Length = 305
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ C + + +++F L RNA+C Y +R D + DD S+P + + A
Sbjct: 9 YRICREIARREAKNFYYSFVALPEAKRNAICAVYAFMRHADDLSDDESLPLAARREKMQA 68
Query: 97 FHRHVYDREWHFSCGTKE-----YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
+ WH + + L D L + Q D+ + GA
Sbjct: 69 WLDA-----WHSAAAGAPGEDPVFLALTDAQQRFGITTELLDQLVQGTAMDLYREEGA-- 121
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNII 211
A F + +D YCYYVA +VGL ++F G D + L+ G+ Q TNI+
Sbjct: 122 AAF--DTYATFEDLYRYCYYVASVVGLVCIRIF---GYTDPRAEKLAEETGIAFQLTNIL 176
Query: 212 RDYLEDINEIPKCRMFWPRE 231
RD ED+ + R++ P+E
Sbjct: 177 RDVREDVE---RGRIYLPQE 193
>gi|254424950|ref|ZP_05038668.1| Squalene and phytoene synthases superfamily [Synechococcus sp. PCC
7335]
gi|196192439|gb|EDX87403.1| Squalene and phytoene synthases superfamily [Synechococcus sp. PCC
7335]
Length = 279
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L SR+F + I L +L+ AV YL +RA+D +ED + +K +L ++
Sbjct: 9 ALLKATSRTFFIPISILPNELKEAVASAYLCMRAIDQIEDHPDMDFVLKSKLLRQLSLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFH-HVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
F+ G K + +++ + L + I D T M MA +
Sbjct: 69 QAGTESSNAADFAQGLKAFDADLEEVTLRIGEWALLAPETISPRIWDATAAMADRMAYWA 128
Query: 156 CKE--VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGL--FLQKTNII 211
+ +E+ D D YC+ VAG VGL LS L+ D P + + ++G LQ NI+
Sbjct: 129 ERNWLIENEADLDRYCFSVAGSVGLMLSDLW---AWHDGTPSNRTEAIGFGRGLQSVNIL 185
Query: 212 RDYLEDINEIPKCRM--FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
R++ ED K R F+P W+ DM A ++
Sbjct: 186 RNHTED-----KVRSVEFYPPG-WTDA---------------------DMQQYARRNLAL 218
Query: 270 CLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +AL FC IP +A GTL
Sbjct: 219 ADAYTNALPKGPALTFCRIPLALAHGTL 246
>gi|94968773|ref|YP_590821.1| farnesyl-diphosphate farnesyltransferase [Candidatus Koribacter
versatilis Ellin345]
gi|94550823|gb|ABF40747.1| farnesyl-diphosphate farnesyltransferase [Candidatus Koribacter
versatilis Ellin345]
Length = 316
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 22 MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED 81
M++ + + + +A C + +++F L RNA+C Y +R D + D
Sbjct: 1 MSAEKKQHPLQLSTAYAVCRHITRSQAKNFYYAFLVLPRRKRNALCAVYAFMRHADDISD 60
Query: 82 DTSIPTDVK----VPILIAFHRHVYDREWH------FSCGTKEYKVLMDQFHH-VSTAFL 130
D +IP V+ +L FHR + + K Y+V M+ V +
Sbjct: 61 DEAIPVLVRREKLSTLLDNFHRAIAGEPTDDPVLIALAHTQKTYEVPMEWLDKLVFGTMM 120
Query: 131 ELGKGYQDAIEDITKRMGA--GMAKFICKEV---ESIDDYDEYCYYVAGLVGLGLSKLFY 185
+L D +T+ + A G + K + + DD YCY+VA +VGL K+F
Sbjct: 121 DL----HDDTPAVTESVAAEGGSTAVLTKRILTFPTFDDLYAYCYHVASVVGLVCIKIF- 175
Query: 186 ASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 217
G D + L+ G+ Q TNIIRD ED
Sbjct: 176 --GYRDPKAEKLAERTGIAFQLTNIIRDVKED 205
>gi|392944507|ref|ZP_10310149.1| squalene synthase HpnD [Frankia sp. QA3]
gi|392287801|gb|EIV93825.1| squalene synthase HpnD [Frankia sp. QA3]
Length = 303
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 31/191 (16%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C ++ + +R+F+ I+ L + R A+ Y + R LD + D +P + K+ L
Sbjct: 18 YAACEALTKEAARNFSYGIRLLPPEKRGALSAVYALARHLDDI-GDGDLPAEEKIAGLAQ 76
Query: 97 FHRHVYDREWHFSCGTKE--YKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
V + G+ + Y L D +F AF+EL G + + T
Sbjct: 77 VRAEVN----NLGAGSSDPMYVALDDAARRFPIPLEAFIELADGVESDVHGTT------- 125
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD----SLSNSMGLFLQK 207
++ DD YC VAG +G +F GTE A D ++++++G+ LQ+
Sbjct: 126 -------YDTFDDLVGYCRLVAGTIGRLSLGIF---GTEQAASDRSAPAIADALGVALQQ 175
Query: 208 TNIIRDYLEDI 218
TNI+RD ED+
Sbjct: 176 TNILRDVREDL 186
>gi|414078313|ref|YP_006997631.1| phytoene synthase [Anabaena sp. 90]
gi|413971729|gb|AFW95818.1| phytoene synthase [Anabaena sp. 90]
Length = 276
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 44/268 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHRH 100
+L SR+F + I L + L+ AV YL +RALD +EDD ++ K +L I+
Sbjct: 10 ILKDTSRTFYIPISILPSGLQEAVASAYLCMRALDQIEDDPNLDNGTKKRLLQNISLTLQ 69
Query: 101 VYDREWHFSCGTKEYKVLMDQFHHVSTAFLELG----KGYQDAIEDITKRMGAGMAKFIC 156
+ + +K + VS E + I D T M MA +
Sbjct: 70 AGIDGFPLDAFSVGFKGCENSLQEVSLRIREWSILAPESIAPRIWDATAAMADRMAYWAD 129
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ ++E+ D D Y + VAG VGL LS L+ + GT+ ++ G LQ NI+R+
Sbjct: 130 RNWQIETEADLDRYTFGVAGAVGLLLSDLWNWYDGTQSNRTQAI--GFGRGLQAVNILRN 187
Query: 214 YLED----INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
ED +N P W + KY + N ++ +A
Sbjct: 188 NGEDLTRGVNFYPAG---WDNDHLQKYARR-----------------NLILADA------ 221
Query: 270 CLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y ++L + +FC IP +A GTL
Sbjct: 222 ---YTNSLPNGPALQFCQIPLALAHGTL 246
>gi|397691817|ref|YP_006529071.1| Squalene/phytoene synthase [Melioribacter roseus P3M]
gi|395813309|gb|AFN76058.1| Squalene/phytoene synthase [Melioribacter roseus P3M]
Length = 280
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 50 SFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS 109
SF L + R A+ Y R D + D+TS P D+K L R+W
Sbjct: 15 SFYYAFSLLEPEKREAMNAVYAFCRTTDDIVDETSEPDDIKYEKL---------RKWRIE 65
Query: 110 C-----GTKEYKVL------MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
G +Y +L + +F+ F EL +G M + K K
Sbjct: 66 FEKGLRGRSDYPLLNKLNQIISRFNIPIEPFFELIEG-----------MEMDLQK---KS 111
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S DD +YCY VA VGL ++F G ++ + + ++G+ LQ TNIIRD +DI
Sbjct: 112 YLSFDDLVQYCYRVASTVGLMCIEIF---GYKNNSTKDYAVNLGIALQLTNIIRDVGKDI 168
Query: 219 NEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
R++ P+ K+ +EDLK ++ +D+ +Q ++ A + E
Sbjct: 169 E---NDRIYLPKYDLDKFNYSIEDLKTKKYNDRFIQLMDYESKRAEFYFE 215
>gi|284929275|ref|YP_003421797.1| farnesyl-diphosphate farnesyltransferase [cyanobacterium UCYN-A]
gi|284809719|gb|ADB95416.1| farnesyl-diphosphate farnesyltransferase [cyanobacterium UCYN-A]
Length = 270
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 111/269 (41%), Gaps = 48/269 (17%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L + SR+F + I +L +LR AV YL +RA+D VED I +K IL ++
Sbjct: 11 LKETSRTFYIPISRLPDNLREAVASAYLCMRAIDEVEDHPDIENFIKAKILRQMSLNL-- 68
Query: 104 REWHFSCGTKEYKVLMDQFHHV-STAFLELGKGYQDA-------IEDITKRMGAGMAKFI 155
+ + G K++ + + ++ L+LGK A I D T M MA +
Sbjct: 69 QAVNEKSGIKDFSADLAPYENILPDVSLQLGKWALLAPNTIAPRIWDATAAMADRMAYWT 128
Query: 156 CKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ + ++Y + VAG VG+ LS L+ + GT+ + G LQ NIIR
Sbjct: 129 ENNWTIRTEAHLNQYTFSVAGAVGILLSDLWSWHDGTQ--TSRQYAIGFGRGLQAVNIIR 186
Query: 213 DYLEDINE----IPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
++ ED+N IP+ +++Y L DL
Sbjct: 187 NHREDLNRGVSFIPQGWHIKDVYKYARYNLTLADL------------------------- 221
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L FC IP +A GTL
Sbjct: 222 ----YTKSLDSGPALDFCKIPLALAHGTL 246
>gi|255543837|ref|XP_002512981.1| hypothetical protein RCOM_1449900 [Ricinus communis]
gi|223547992|gb|EEF49484.1| hypothetical protein RCOM_1449900 [Ricinus communis]
Length = 69
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 1 MGSLA--AVLRHPDDLYPLLKLKMASRQAEKQIPPEP-HWAFCYSMLHKVSRSFALVIQQ 57
MGSL +L +PD++ LLKL A + AE++IP EP H FCY +L+K+S SFALVIQ
Sbjct: 1 MGSLKLKEILENPDEILVLLKLIRAVKDAERKIPKEPNHLGFCYFILNKISHSFALVIQG 60
Query: 58 LGTDLRNA 65
LR+A
Sbjct: 61 HQPMLRDA 68
>gi|254385934|ref|ZP_05001252.1| squalene/phytoene synthase [Streptomyces sp. Mg1]
gi|194344797|gb|EDX25763.1| squalene/phytoene synthase [Streptomyces sp. Mg1]
Length = 311
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P +++C ++ +R+FA I+ L TD R+A+ Y R +D + D T P + K+
Sbjct: 5 PISAAYSYCEAVTGAQARNFAYGIRLLPTDKRHAMSALYAFSRRVDDIGDGTLAP-EAKL 63
Query: 92 PILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
L R + R + V D V+ A + + +E + + + +
Sbjct: 64 TRL-EETRALLGR-------IRAEDVDEDDTDPVAVALAHAARRFPIPLEGLDELIDGVL 115
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAP------DSLSNSMGLFL 205
+ E+ DD EYC VAG +G +F + LAP D ++++GL L
Sbjct: 116 MDVRGETYETWDDLKEYCRCVAGAIGRLSLGVFGTVNSGSLAPADAARADEYADTLGLAL 175
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
Q TNI+RD ED R + P E +K+
Sbjct: 176 QLTNILRDVRED---AANGRTYLPAEDLAKF 203
>gi|443323359|ref|ZP_21052366.1| phytoene/squalene synthetase [Gloeocapsa sp. PCC 73106]
gi|442786923|gb|ELR96649.1| phytoene/squalene synthetase [Gloeocapsa sp. PCC 73106]
Length = 279
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 46/269 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I +L ++L AV YL +RA+D +ED ++ K +L ++
Sbjct: 10 ILKETSRTFYIPICRLPSELLEAVASAYLCMRAIDEIEDHPTLNNLTKAKLLRHISLNLQ 69
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRM---GAGMAKFIC--- 156
+ + Y + +Q+ + L LG+ A E I R+ A MA +
Sbjct: 70 SSDENSGVDDFTYGLAGEQY-LLPEVTLRLGEWCLLAPESIAPRIWDATAAMADRMAYWS 128
Query: 157 ---KEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ + +D D Y + VAG VGL LS L+ + + T+ ++ G LQ NI+R
Sbjct: 129 QNNWHIRTHEDLDSYTFSVAGAVGLLLSDLWAWHNNTQTNRMHAI--GFGRGLQSVNILR 186
Query: 213 DYLED----INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
++ ED +N P+ W + Y + +H+
Sbjct: 187 NHREDQARGVNFFPQG---WDNQTMQAYARR------------------------NLHLA 219
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
DC Y +L FC IP +A GTL
Sbjct: 220 DC--YTKSLPPGPALDFCQIPLALAYGTL 246
>gi|398780956|ref|ZP_10545175.1| phytoene synthase [Streptomyces auratus AGR0001]
gi|396997839|gb|EJJ08784.1| phytoene synthase [Streptomyces auratus AGR0001]
Length = 313
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
A P + +C ++ + +R+FA I+ L TD R A+ Y R +D + D T P
Sbjct: 5 AHASAPVLAAYRYCEAITGQQARNFAYGIRLLPTDKRQAMSALYAFSRRIDDIGDGTLEP 64
Query: 87 TDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
T A R + D + K+ ++ D V+ A + + + +E + +
Sbjct: 65 T--------AKQRRLEDTRALLAR-IKDGRIDDDDTDPVAVALSDAARRFPLPLEGLDEL 115
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDL--APDSLSNSMGL 203
+ + + E+ D+ YC VAG +G L L G +D AP+ ++++GL
Sbjct: 116 IDGVLMDVRGETYETWDELKVYCRCVAGAIGRLSLGVFGTVPGAQDAERAPE-YADTLGL 174
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
LQ TNI+RD ED R + P E +K+
Sbjct: 175 ALQLTNILRDVREDAG---NGRTYLPAEDLAKF 204
>gi|428313982|ref|YP_007124959.1| phytoene/squalene synthetase [Microcoleus sp. PCC 7113]
gi|428255594|gb|AFZ21553.1| phytoene/squalene synthetase [Microcoleus sp. PCC 7113]
Length = 276
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 40/274 (14%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL----IAFH 98
+L + SR+F + I L L+ AV YL +RA+D +ED SI K +L +
Sbjct: 10 VLEETSRTFYIPISYLPLRLQEAVTSAYLCMRAIDEIEDHPSIDNSSKAKLLRMISLKLQ 69
Query: 99 RHVYDREWH-FSCGTKEYKVLMDQF-----HHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
V H FS G ++ ++ + S A +++ DA + RM
Sbjct: 70 AAVDGFAIHDFSDGFSLHQEILPEVSIRIGEWSSLAPVDIAPRIWDATAAMADRMAYWAD 129
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNII 211
+ ES D + Y + VAG VGL LS L+ + GT+ ++ G LQ NI+
Sbjct: 130 NNWTIQTES--DLNRYTFSVAGAVGLLLSDLWTWYDGTQTNRMQAVGFGRG--LQAVNIL 185
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R++ +D + + F+P E WSK + M A ++
Sbjct: 186 RNHTDD---LARGVDFYP-EGWSK---------------------DAMQAYARRNLALAD 220
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
Y +AL + FC IP ++A GTL N E
Sbjct: 221 AYTNALPEGPALTFCQIPLLLAHGTLDALSNGKE 254
>gi|354565377|ref|ZP_08984552.1| Squalene/phytoene synthase [Fischerella sp. JSC-11]
gi|353549336|gb|EHC18778.1| Squalene/phytoene synthase [Fischerella sp. JSC-11]
Length = 271
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 46/269 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA------ 96
+L + SR+F + I +L L+ AV YL +RA+D +ED ++ K IL A
Sbjct: 10 ILKETSRTFYIPISRLPRGLQEAVASAYLCMRAIDEIEDHPTLDNQTKANILRAISLTLQ 69
Query: 97 -----FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
F + RE+ + K+L + + L + I D T M M
Sbjct: 70 AAVDGFTIDAFSREF-----SSHEKLLAEVTIRIREWALLAPETIAPRIWDATGAMADRM 124
Query: 152 AKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKT 208
A + + ++ + D D Y + VAG VGL LS L+ + GT+ + + G LQ
Sbjct: 125 AYWAERNWKIHTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQ--TNRTYAVGFGRGLQAV 182
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
NI+R++ ED+ ++ VN D EN M A ++
Sbjct: 183 NILRNHKEDL---------------TRDVNFFPDGWSAEN----------MQVYARRNLV 217
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y AL FC IP +A GTL
Sbjct: 218 LAEAYTKALSAGPTLDFCQIPLSLAYGTL 246
>gi|408682166|ref|YP_006881993.1| Phytoene synthase [Streptomyces venezuelae ATCC 10712]
gi|328886495|emb|CCA59734.1| Phytoene synthase [Streptomyces venezuelae ATCC 10712]
Length = 316
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 26 QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI 85
Q E P + +++C ++ + +R+FA I+ L T+ R A+ Y R +D + D T
Sbjct: 8 QPEPSAPVQAAYSYCEAVTGQQARNFAYGIRLLPTEKRQAMSALYAFSRRVDDIGDGTLA 67
Query: 86 PTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITK 145
P + K L A R + DR + V D V+ A + + + + + +
Sbjct: 68 P-EAKRERLEA-TRALLDR-------VRTGGVDEDDTDPVAVALADSARRFPIPLGGLDE 118
Query: 146 RMGAGMAKFICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMG 202
+ + + E+ DD YC VAG +G LG+ + D AP+ ++++G
Sbjct: 119 LIDGVLMDVRGETYETWDDLKVYCRCVAGAIGRISLGVFGTQPGARGADRAPE-YADTLG 177
Query: 203 LFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
L LQ TNI+RD ED R + P + +K+
Sbjct: 178 LALQLTNILRDVREDAG---NGRTYLPADDLAKF 208
>gi|119189547|ref|XP_001245380.1| hypothetical protein CIMG_04821 [Coccidioides immitis RS]
Length = 269
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 45/183 (24%)
Query: 140 IEDITKRMGAGMAKF--ICKE------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191
I+DI K MG MA + + E V++I DY+ Y +YVAGLV GL++L
Sbjct: 35 IKDIAKGMGNFMADYAKMADENANGLSVKNIKDYELYRHYVAGLVDEGLTRLN------- 87
Query: 192 LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
IRD ED + R FWP E+WSKYV DL +N +K
Sbjct: 88 -------------------IRDIREDYDSK---RYFWPEEVWSKYVENFSDLFLPQNREK 125
Query: 252 AVQ-CLNDMVTNALMHVEDC-----LKYMSALR-DHAIFRFCAIPQIMAIGT-LALCYNN 303
A+Q +N + + DC L S LR +H + ++P I T L+ C +
Sbjct: 126 ALQRSINLQLCCYTANNGDCDARALLSKPSNLRPEHQNLKGLSVPNHDRINTGLSTCLRS 185
Query: 304 IEV 306
++
Sbjct: 186 VQA 188
>gi|146332825|gb|ABQ22918.1| squalene synthetase-like protein [Callithrix jacchus]
Length = 125
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 290 QIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKN 349
Q+MAI TLA CYNN +VFRGVVK+R+G ++ NM V Y + + +I +
Sbjct: 1 QVMAIATLAACYNNQQVFRGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDS 60
Query: 350 DPNATKTLSRVEAIQKACMDSGVLNKRFKILHYS 383
DP+ +KT + I+ + + L R HYS
Sbjct: 61 DPSFSKTRQIISTIRTQNLSNCQLISRS---HYS 91
>gi|302537964|ref|ZP_07290306.1| squalene synthase HpnD [Streptomyces sp. C]
gi|302446859|gb|EFL18675.1| squalene synthase HpnD [Streptomyces sp. C]
Length = 316
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ +R+FA I+ L TD R A+ Y R +D + D P D K+ L
Sbjct: 22 YSYCEAVTGTQARNFAYGIRLLPTDKRQAMSALYAFSRRVDDIGDGALAP-DAKLARL-E 79
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + R + +V D V+ A + + + + + + +
Sbjct: 80 DTRALLGR-------IRAGEVDEDDTDPVAVALAHAARRFPIPLGGLDELIDGVLMDVRG 132
Query: 157 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
+E E+ DD YC VAG +G +F G D A D ++++GL LQ TNI+RD E
Sbjct: 133 EEYETWDDLKAYCRCVAGAIGRLSLGVFGTVGPADRA-DEYADTLGLALQLTNILRDVRE 191
Query: 217 DINEIPKCRMFWPREIWSKY 236
D R + P E +K+
Sbjct: 192 DAG---NGRTYLPAEDLAKF 208
>gi|126657162|ref|ZP_01728328.1| hypothetical protein CY0110_24576 [Cyanothece sp. CCY0110]
gi|126621433|gb|EAZ92144.1| hypothetical protein CY0110_24576 [Cyanothece sp. CCY0110]
Length = 270
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 114/274 (41%), Gaps = 58/274 (21%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV-- 101
L + SR+F + I +L DL++AV YL +RA+D VED + K IL ++
Sbjct: 11 LRETSRTFYIPISRLPGDLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLNLQA 70
Query: 102 ---YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDA-------IEDITKRMGAGM 151
R FS G Y H + L LG+ A + D T M M
Sbjct: 71 AVEMSRIEDFSVGLVPYS------HCLPDVSLRLGQWAMLAPPTIAPRVWDATASMADRM 124
Query: 152 AKFICKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKT 208
A + + + D+Y + VAG VGL LS L+ + GT+ + G LQ
Sbjct: 125 AYWAENNWTIRTKAHLDQYTFSVAGAVGLLLSDLWAWYDGTQ--TNRQYAIGFGRGLQAV 182
Query: 209 NIIRDYLED----INEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNA 263
NI+R++ ED +N IP+ W K+ED+ +Y ++ K L D+
Sbjct: 183 NIVRNHREDLRRGVNFIPQG--------W-----KIEDVHQYARDNLK----LADL---- 221
Query: 264 LMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L FC IP +A GTL
Sbjct: 222 ---------YTQSLGPGPALDFCKIPLALAHGTL 246
>gi|111220883|ref|YP_711677.1| phytoene synthase [Frankia alni ACN14a]
gi|111148415|emb|CAJ60087.1| Putative phytoene synthase [Frankia alni ACN14a]
Length = 299
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 31/191 (16%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C ++ + +R+F+ I+ L + R A+ Y + R LD + D +P + K+ L
Sbjct: 14 YAACEALTKEAARNFSYGIRLLPPEKRGALSAVYALARHLDDI-GDGDLPPEEKLAGLAQ 72
Query: 97 FHRHVYDREWHFSCGTKE--YKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
V + G+ + Y L D +F AF+EL G + + T
Sbjct: 73 VRAEVN----NLGAGSSDPMYVALDDAARRFPIPLEAFIELADGVESDVHGTT------- 121
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPD----SLSNSMGLFLQK 207
++ DD YC VAG +G +F GTE A D ++++++G+ LQ+
Sbjct: 122 -------YDTFDDMVGYCRLVAGTIGRLSLGIF---GTEQAASDRSAPAIADALGVALQQ 171
Query: 208 TNIIRDYLEDI 218
TNI+RD ED+
Sbjct: 172 TNILRDVREDL 182
>gi|411117863|ref|ZP_11390244.1| phytoene/squalene synthetase [Oscillatoriales cyanobacterium
JSC-12]
gi|410711587|gb|EKQ69093.1| phytoene/squalene synthetase [Oscillatoriales cyanobacterium
JSC-12]
Length = 273
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I +L + L+ AV YL +RA+D +ED ++ +K +L +
Sbjct: 10 VLEETSRTFFIPISRLPSGLQEAVASAYLCMRAIDEIEDHPNLDNSLKAKLLQTISLTLQ 69
Query: 103 DREWHFSC-----GTKEYKVLMDQFHHVSTAFLELG-KGYQDAIEDITKRMGAGMA--KF 154
F+ +YK L+ + + + L + D T M MA
Sbjct: 70 SATHEFTASDLATALSDYKDLIPEVSYRLGEWAVLAPSAIAPRVWDATAAMADRMAYWAL 129
Query: 155 ICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ V++ D D+Y + VAG VGL LS L+ + GT+ ++ G LQ NI+R+
Sbjct: 130 LNWNVQTQADLDQYTFGVAGAVGLLLSDLWGWYDGTQTNRLHAIGFGRG--LQAVNILRN 187
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F+P W+ M T A ++ Y
Sbjct: 188 HSEDLT---RGVDFFPHG-WTH---------------------EQMYTYARENLSLADAY 222
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVV 311
+AL FC IP +A TL AL + ++ R +V
Sbjct: 223 TAALPLGPALDFCRIPLALAHATLDALSHGEAKLSRTMV 261
>gi|167584530|ref|ZP_02376918.1| Squalene/phytoene synthase [Burkholderia ubonensis Bu]
Length = 354
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D + D + +L ++
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTQLRENIE 73
Query: 102 -YDREWHFSCGTKEY-KVLMDQFHHV-------STAFLEL-GKGYQDAIEDITKRMGAGM 151
D S ++ ++ D HV A L + AI + + +GM
Sbjct: 74 RLDDGVALSQALEDVTRMQTDSHEHVLLGSMQPMLALLRMQSTADSAAIRKVVATLTSGM 133
Query: 152 AKFICK-----------EVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSL 197
+F + + S + D Y Y VAG VG ++ + + PD
Sbjct: 134 -EFDLRTFPDEQAGQVAALPSRELLDRYTYLVAGCVGEFWTDMTGMHTRAARRWDLPDMR 192
Query: 198 SNSM--GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC 255
+ G LQ TNI+RD +D+ I +C + P+E+ + ++ DL + S +A
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPQEVLDAHGLRVPDLLAPDASQRARGV 249
Query: 256 LNDMVTNALMHVED-CLKYMSALRDHAIFRF-CAIPQIMAIGTLAL 299
L D++ AL D CL ++ R R C P ++ + TL L
Sbjct: 250 LFDLLRVALAQYRDACLYTVAIPRRFVRLRLACLWPILIGLETLEL 295
>gi|408829685|ref|ZP_11214575.1| phytoene synthase [Streptomyces somaliensis DSM 40738]
Length = 316
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 16/211 (7%)
Query: 30 QIPP--EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPT 87
Q PP + + +C + + +R+FA I+ L R A+ Y R +D + D + P
Sbjct: 10 QAPPPVQAAYGYCEDVTARQARNFAYGIRLLPAGKRRAMSALYAFSRRVDDIGDGSLDPG 69
Query: 88 DVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRM 147
+ + A R V DR + V D V+ A + + + +E + + +
Sbjct: 70 AKRHRLEAA--RGVLDR-------VRRGAVAEDDTDPVAVALADAARRFPLPLEGLDELI 120
Query: 148 GAGMAKFICKEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDLA-PDSLSNSMGLFL 205
+ + E+ DD YC VAG +G L L A G D A ++++GL L
Sbjct: 121 DGVLMDVRGRTYETWDDLKVYCRCVAGAIGRLSLGVFGTAPGARDAARAPQYADTLGLAL 180
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
Q TNI+RD ED R + P E +++
Sbjct: 181 QLTNILRDLREDAA---NGRSYLPAEDLAEF 208
>gi|294816064|ref|ZP_06774707.1| Putative squalene/phytoene synthase [Streptomyces clavuligerus ATCC
27064]
gi|326444406|ref|ZP_08219140.1| probable phytoene synthase [Streptomyces clavuligerus ATCC 27064]
gi|294328663|gb|EFG10306.1| Putative squalene/phytoene synthase [Streptomyces clavuligerus ATCC
27064]
Length = 317
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 32 PPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTD 88
PP P +++C ++ +R+FA I+ L TD R A+ Y + R +D + D T P
Sbjct: 11 PPAPVQAAYSYCEAVTGAQARNFAYGIRLLPTDKRQAMSALYALSRRVDDIGDGTLAP-- 68
Query: 89 VKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMG 148
A R + V D V+ A + + + ++ + + +
Sbjct: 69 -------AAKRERLQATRELLARVRAGAVADDDTDPVAVALADTARRFPVPLDALDELID 121
Query: 149 AGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS-----LSNSMGL 203
+ E+ DD YC VAG +G +F GT+ AP + ++++GL
Sbjct: 122 GVLMDVRGATYETWDDLRAYCRCVAGAIGRLSLGVF---GTQSGAPGAERAPEYADTLGL 178
Query: 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
LQ TNI+RD ED R + P + +K+
Sbjct: 179 ALQLTNILRDLREDAA---NGRTYLPADDLAKF 208
>gi|379733737|ref|YP_005327242.1| Phytoene synthase (modular protein) [Blastococcus saxobsidens DD2]
gi|378781543|emb|CCG01193.1| Phytoene synthase (modular protein) [Blastococcus saxobsidens DD2]
Length = 589
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C + + +R+F+ I+ L T R A+ Y R +D + DDT++ K +L A
Sbjct: 313 CEEITRREARNFSYGIRLLPTGKRRAMSAIYAFARRVDDIGDDTTLTPAEKRRLLSAVRD 372
Query: 100 HVYDREWH----FSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
++ + H S + V M TAF +L G + +E R
Sbjct: 373 QLHALDDHRDDPVSVALHDAAVRM---QLPLTAFDDLIDGVEMDVEGRAYR--------- 420
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
++DD +YC +VAG +G +F + E AP L++++G+ LQ TNI+RD
Sbjct: 421 -----TMDDLVDYCEHVAGSIGRLSLGVFGTADPEGAAP--LADALGVGLQITNILRDIR 473
Query: 216 EDINEIPKCRMFWPRE 231
ED+ R++ P E
Sbjct: 474 EDLG---NGRVYLPAE 486
>gi|415991035|ref|ZP_11560031.1| Squalene synthase, partial [Acidithiobacillus sp. GGI-221]
gi|339835235|gb|EGQ62932.1| Squalene synthase [Acidithiobacillus sp. GGI-221]
Length = 300
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 37/289 (12%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL--- 118
LR+AV YL+ R DT+EDD +P + K F + V + + L
Sbjct: 5 LRDAVGNGYLLCRIADTIEDDPDMPWEKKACWQAKFLQVVEGADDPAAFAAALGADLSPE 64
Query: 119 MDQFHH--------VSTAFLELGKGYQDAIEDITKRMGAGMAKF----ICKEVESIDDYD 166
M + H V L Q A+ + MG GMA+F + + + D
Sbjct: 65 MPEAEHDLIRHTPEVVAITHSLNPTQQAALSRCVRIMGMGMAEFQQHASLQGLADMAALD 124
Query: 167 EYCYYVAGLVGLGLSKLFYA----SGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIP 222
YCY VAG+VG L+ LF D L+ S G LQ TNI++D +D
Sbjct: 125 RYCYVVAGVVGEMLTSLFVEFEPLLAEHDAEMQRLAVSFGQGLQMTNILKDIWDDWQ--- 181
Query: 223 KCRMFWPREIWSKYVNKLEDLKYEENSDKAVQC-LNDMVTNALMHVEDCLKY-------M 274
+ + PR ++ ++ + ++ + D A Q L +++ A H+++ L+Y
Sbjct: 182 RGVSWMPRALFQRHGCDIAGVR-PGSRDPAFQAGLTELLGIAANHLQNALRYTLLIPAGQ 240
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGV-VKMRRGLTAKVI 322
+ +RD FC MA+ TL N G VK+ R +V+
Sbjct: 241 TGMRD-----FCLWAIAMAVLTLRRIAENPAFASGSEVKISRRSVHRVV 284
>gi|444360707|ref|ZP_21161891.1| squalene/phytoene synthase, partial [Burkholderia cenocepacia BC7]
gi|443599512|gb|ELT67783.1| squalene/phytoene synthase, partial [Burkholderia cenocepacia BC7]
Length = 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D + D + +L
Sbjct: 7 LLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDDIE 66
Query: 95 -----IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
+A R + D + E+ VL+ + + + +I + + A
Sbjct: 67 RLGDGVALSRSLEDVT-RLQTDSHEH-VLLGSMEPMLALLRAQPEADRASIRKVVATLTA 124
Query: 150 GMAKFICK--------EVESI---DDYDEYCYYVAGLVGLGLSKLF----YASGTEDLAP 194
GM +F + +V S+ D D Y Y VAG VG + + A+ DL P
Sbjct: 125 GM-EFDLRTFPDEQSGQVASLPTRDVLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDL-P 182
Query: 195 DSLSNSM--GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
D + G LQ TNI+RD +D+ I +C + P ++ + + DL E S++A
Sbjct: 183 DMREKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPDDVLRAHGLVVADLMQPEASERA 239
Query: 253 VQCLNDMVTNALMHVED-CLKYMSALRDHAIFRF-CAIPQIMAIGTLALCYNN 303
L D++ AL D CL ++ R R C P ++ + TL L +
Sbjct: 240 RGVLVDLLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGH 292
>gi|322435261|ref|YP_004217473.1| phytoene synthase [Granulicella tundricola MP5ACTX9]
gi|321162988|gb|ADW68693.1| Phytoene synthase [Granulicella tundricola MP5ACTX9]
Length = 309
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-- 94
+AFC + + +++F + L +A+C Y +R D + DD ++P + ++
Sbjct: 10 YAFCRGVAKREAKNFYWSFRVLPKAKSDAMCAVYAFMRRADDIADDETMPVAQRRVVMAE 69
Query: 95 -IAFHRHVY--------------DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDA 139
+A R V D + F G + L++ ++ LE G+G
Sbjct: 70 WLAAWRLVRETGAGDDPVFVALGDAQRRFGIGDE----LLEDLVRGTSMDLEEGQGAAGG 125
Query: 140 IEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN 199
++G G+ + E+ +D YCY VA +VGL K+F G D + L+
Sbjct: 126 ----AVKLGDGLEGY-----ETFEDLYRYCYLVASVVGLVCIKIF---GYRDARAELLAE 173
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
G+ Q TNI+RD ED+ + R++ P+ + ++
Sbjct: 174 RTGVAFQLTNILRDVKEDVE---RGRVYLPQSLLGEF 207
>gi|206563249|ref|YP_002234012.1| putative squalene/phytoene synthase [Burkholderia cenocepacia
J2315]
gi|444370118|ref|ZP_21169806.1| squalene/phytoene synthase [Burkholderia cenocepacia K56-2Valvano]
gi|198039289|emb|CAR55254.1| putative squalene/phytoene synthase [Burkholderia cenocepacia
J2315]
gi|443598020|gb|ELT66417.1| squalene/phytoene synthase [Burkholderia cenocepacia K56-2Valvano]
Length = 355
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D + D + +L
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDDIE 73
Query: 95 -----IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
+A R + D + E+ VL+ + + + +I + + A
Sbjct: 74 RLGDGVALSRSLEDVT-RLQTDSHEH-VLLGSMEPMLALLRAQPEADRASIRKVVATLTA 131
Query: 150 GMAKFICK--------EVESI---DDYDEYCYYVAGLVGLGLSKLF----YASGTEDLAP 194
GM +F + +V S+ D D Y Y VAG VG + + A+ DL P
Sbjct: 132 GM-EFDLRTFPDEQSGQVASLPTRDVLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDL-P 189
Query: 195 DSLSNSM--GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
D + G LQ TNI+RD +D+ I +C + P ++ + + DL E S++A
Sbjct: 190 DMREKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPDDVLRAHGLVVADLMQPEASERA 246
Query: 253 VQCLNDMVTNALMHVED-CLKYMSALRDHAIFRF-CAIPQIMAIGTLALCYNN 303
L D++ AL D CL ++ R R C P ++ + TL L +
Sbjct: 247 RGVLVDLLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGH 299
>gi|421864794|ref|ZP_16296479.1| Phytoene synthase [Burkholderia cenocepacia H111]
gi|358075414|emb|CCE47357.1| Phytoene synthase [Burkholderia cenocepacia H111]
Length = 355
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D + D + +L
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDDIE 73
Query: 95 -----IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
+A R + D + E+ VL+ + + + +I + + A
Sbjct: 74 RLGDGVALSRSLEDVT-RLQTDSHEH-VLLGSMEPMLALLRAQPEADRASIRKVVATLTA 131
Query: 150 GMAKFICK--------EVESI---DDYDEYCYYVAGLVGLGLSKLF----YASGTEDLAP 194
GM +F + +V S+ D D Y Y VAG VG + + A+ DL P
Sbjct: 132 GM-EFDLRTFPDEQSGQVASLPTRDVLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDL-P 189
Query: 195 DSLSNSM--GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKA 252
D + G LQ TNI+RD +D+ I +C + P ++ + + DL E S++A
Sbjct: 190 DMREKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPDDVLRAHGLVVADLMQPEASERA 246
Query: 253 VQCLNDMVTNALMHVED-CLKYMSALRDHAIFRF-CAIPQIMAIGTLALCYNN 303
L D++ AL D CL ++ R R C P ++ + TL L +
Sbjct: 247 RGVLVDLLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGH 299
>gi|297584503|ref|YP_003700283.1| Phytoene synthase [Bacillus selenitireducens MLS10]
gi|297142960|gb|ADH99717.1| Phytoene synthase [Bacillus selenitireducens MLS10]
Length = 283
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C ++ S++FA L + R V Y R D + D+ P L AF +
Sbjct: 10 CRQIIEHHSKTFAKAFNHLPKEKREGVWAVYAFCRLADDIVDEGENPE----AELKAF-K 64
Query: 100 HVYDREWHFSCG-----TKEYKVLMDQFHHVS---TAFLELGKGYQDAIEDITKRMGAGM 151
+D F G T + L D F T F ++ KG D+TK
Sbjct: 65 DDFDT---FVAGDIPEQTALWIALDDAFKRFDFDHTPFYDMIKG---QYMDLTK------ 112
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNII 211
K ES+D+ Y Y+VAG VGL L + E+L ++ S+G +Q TNI+
Sbjct: 113 -----KRYESLDEVLTYSYHVAGTVGLMLLPILSPDKKEELYDSAV--SLGYAMQITNIL 165
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
RD ED++ + R++ PREI +K+ + DL+ D+ + ++ A H L
Sbjct: 166 RDVGEDLD---RDRIYLPREILTKHGYTIADLENRVLDDRFIAIWEELAEIAETHY---L 219
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTL---ALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
K S L + +F + + A+ N +VF + + AK+I+ + N
Sbjct: 220 KGTSELNLYPLFARLPVKAAASFYKAILNAVRRNGYQVFHERAYVTQDEKAKIIETSIN 278
>gi|332709620|ref|ZP_08429580.1| farnesyl-diphosphate farnesyltransferase [Moorea producens 3L]
gi|332351653|gb|EGJ31233.1| farnesyl-diphosphate farnesyltransferase [Moorea producens 3L]
Length = 273
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHRH 100
+L + SR+F + I L DL+ AV YL +RA+D +ED + K +L I+ +
Sbjct: 9 ILKETSRTFYIPISTLPKDLQEAVASAYLCMRAIDEIEDHPQLGKSTKAALLRTISLNLQ 68
Query: 101 VYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR-------MGAGMAK 153
+ S T E ++ ++ + +G+ A E I R M MA
Sbjct: 69 TMGDSYTASSTTDELLAVLSKYETLPEVTTRIGEWAILAPETIAPRIWEATSAMADRMAY 128
Query: 154 FI-CK-EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNI 210
++ C ++ + D + Y + VAG VGL LS L+ + GT+ ++ G LQ NI
Sbjct: 129 WVECGWKIRTEGDLNGYTFSVAGSVGLLLSDLWAWYDGTQTNRHQAI--GFGRGLQAVNI 186
Query: 211 IRDYLEDIN 219
+R+ +D+
Sbjct: 187 LRNRTDDLT 195
>gi|392375961|ref|YP_003207794.1| Farnesyl-diphosphate farnesyltransferase [Candidatus
Methylomirabilis oxyfera]
gi|258593654|emb|CBE69995.1| Farnesyl-diphosphate farnesyltransferase [Candidatus
Methylomirabilis oxyfera]
Length = 353
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L +VSRSF L ++ + DLR + + YL+ RA DT+ D I ++ L F +
Sbjct: 20 LLKRVSRSFYLTLRAVPADLRRPIGLAYLLARAADTIADTALIGRADRLKHLELFRDVIR 79
Query: 103 D-REWHFSCGTK---------EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM- 151
+ R S T + L+ + L L Q + D+ + GM
Sbjct: 80 EGRPERLSAITNVLVERQRDAAERELLTRLEEGLAILLSLTPSDQTMVRDVVLTLTDGMV 139
Query: 152 ---AKFICKE------VESIDDYDEYCYYVAGLVGLGLSKLFYA-----SGTEDLAPDSL 197
A F ++ +E+ D D Y YYVAG VG + + A +G +
Sbjct: 140 MDLAAFPGEDGERLVSLETRADLDRYTYYVAGCVGEFWTDIHLAHRPSLAGWDREVMRRR 199
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
G LQ TN++RD +D+ I +C + PR+ + + DL K L
Sbjct: 200 GVRFGKGLQMTNVLRDLSKDLR-IGRC--YLPRQELNALGLQPADLLNPSAIAKVKPLLY 256
Query: 258 DMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLALCYNNIEVFRG--VVKM 313
++ AL H ++ Y A+ R R C +P + + TLAL + + V+K+
Sbjct: 257 SLLALALEHYQEGWAYTLAIPRREVRMRLACVLPLFIGLKTLALLARSPNLLDPSVVIKV 316
Query: 314 RRGLTAKVIDRT 325
RG ++ R+
Sbjct: 317 SRGAVYGIMARS 328
>gi|421870663|ref|ZP_16302295.1| Phytoene synthase [Burkholderia cenocepacia H111]
gi|358069569|emb|CCE53173.1| Phytoene synthase [Burkholderia cenocepacia H111]
Length = 356
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 121/290 (41%), Gaps = 39/290 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L VSRSF L + L +R V + YL+ RA DT+ D + D +V +L +V
Sbjct: 13 NLLKNVSRSFYLSLCVLPDGMREPVGLAYLIARAADTIADTALVAPDRRVALLTQLRENV 72
Query: 102 --YDREWHFSCGTKEY-KVLMDQFHHVSTA----FLELGKGYQD----AIEDITKRMGAG 150
D S ++ ++ D HV L L + D AI + + +G
Sbjct: 73 EQLDDGVSLSHALEDVTRMQTDSHEHVLLGSIPPMLALLRAQTDADSAAIRKVVATLTSG 132
Query: 151 MAKFICK--------EVESIDDY---DEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL-- 197
M +F + +V S+ Y D Y Y VAG VG + + +G A S
Sbjct: 133 M-EFDLRTFPDEQSGQVASLPTYDMLDRYTYLVAGCVGEFWTDM---TGAHTCAARSWDF 188
Query: 198 ------SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
G LQ TNI+RD +D +P R + P ++ + + + DL S +
Sbjct: 189 QDMFDKGIQFGKALQMTNILRDCAKD---LPIGRCYLPDDVLAAHGLGVADLMRPGASTR 245
Query: 252 AVQCLNDMVTNALMHVED-CLKYMSALRDHAIFRF-CAIPQIMAIGTLAL 299
A L D++ AL D CL ++ R R C P ++ + TL L
Sbjct: 246 ARGVLIDLLRVALDQYRDACLYTLAIPRRFVRLRLACLWPILIGLETLEL 295
>gi|428770332|ref|YP_007162122.1| farnesyl-diphosphate farnesyltransferase [Cyanobacterium aponinum
PCC 10605]
gi|428684611|gb|AFZ54078.1| farnesyl-diphosphate farnesyltransferase [Cyanobacterium aponinum
PCC 10605]
Length = 270
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 44/267 (16%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L + SR+F + I +L L++AV YL +RA+D +ED I ++K IL +
Sbjct: 11 LKETSRTFYIPISRLPDSLQDAVTSAYLCMRAIDEIEDHPHIENNIKREILTQISASL-- 68
Query: 104 REWHFSCGTKEYKVLMDQFHH----VSTAFLELGK----GYQDAIEDITKRMGAGMAKFI 155
+ ++ ++ + H VS F E I + T M MA +
Sbjct: 69 QSISNDTAVEDITAYIEPYKHLLPEVSYRFAEWATLAPVSIAGRIWEATAAMSDRMAYWA 128
Query: 156 CKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
K +++ D D+Y + VAG VGL LS L+ + T+ +++ + G LQ NI+R
Sbjct: 129 DKNWVIKTKADLDQYTFSVAGSVGLLLSDLWAWYDNTKTNREEAI--AFGRGLQAVNILR 186
Query: 213 DYLEDINEIPKCR--MFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
++ ED K R F+P E W L DM A ++
Sbjct: 187 NHQED-----KLRGVSFFP-EGWQ---------------------LEDMHQYARYNLTLA 219
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L +FC IP +A TL
Sbjct: 220 DSYTKSLPKGPALQFCQIPLTLAHATL 246
>gi|304404769|ref|ZP_07386430.1| Squalene/phytoene synthase [Paenibacillus curdlanolyticus YK9]
gi|304346576|gb|EFM12409.1| Squalene/phytoene synthase [Paenibacillus curdlanolyticus YK9]
Length = 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 41/292 (14%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
+ML K SR+F + I +L L+ AV YL +RA+D +ED + +K +L + +
Sbjct: 16 AMLEKTSRTFYIPISRLVPGLKEAVTSGYLCMRAIDEIEDHEEMDEALKSELLSGIQQAL 75
Query: 102 YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK---- 157
+ + K D V+ + K I R A M++ + +
Sbjct: 76 -ESDNPLEQTDKLLAPHKDVLPPVTMQLNDWLKLCPPTATPIVYRYTAMMSQQMAEWVHT 134
Query: 158 --EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRDY 214
+++ +D D Y Y VAG+VG LS+++ + GT+ +++ G LQ NI+R+
Sbjct: 135 GWSIKTEEDLDRYTYSVAGMVGEMLSEMWQWFDGTKSDMKKAVAFGRG--LQAVNIMRNR 192
Query: 215 LEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYM 274
ED+ + F+P E WS DM+ +++ Y+
Sbjct: 193 DEDLK---RGVDFFP-EGWS---------------------FKDMLQYTKRNLKVADDYI 227
Query: 275 SALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTN 326
+ L+D FC IP +A T L + G K+ R K++ + N
Sbjct: 228 AELKDGPATSFCKIPLALAHATTKL------LAAGGNKLTRAAVLKIVGQFN 273
>gi|254253945|ref|ZP_04947262.1| Phytoene/squalene synthetase [Burkholderia dolosa AUO158]
gi|124898590|gb|EAY70433.1| Phytoene/squalene synthetase [Burkholderia dolosa AUO158]
Length = 400
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 133/323 (41%), Gaps = 47/323 (14%)
Query: 7 VLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAV 66
V R PDDL+ A +P + +L VSRSF L ++ L +R+ V
Sbjct: 36 VPRAPDDLF-----------APMTTHNDPAY-LLGDLLKNVSRSFYLTLRVLPDGMRDPV 83
Query: 67 CIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQF 122
+ YL+ RA DT+ D + D + +L R +R + ++ ++ D
Sbjct: 84 GLAYLLARAADTIADTALVTPDRRAALLTDL-RDDIERLGDGAALSRSLDDVTRMQTDSH 142
Query: 123 HHVSTA----FLELGKGYQDA----IEDITKRMGAGMAKFICK-----------EVESID 163
HV A L L + DA I + + +GM +F + + + D
Sbjct: 143 EHVLLASIQPMLALLRAQPDADRAAIRKVVATLTSGM-EFDLRTFPDEQSGRIASLPTRD 201
Query: 164 DYDEYCYYVAGLVG-----LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
D Y Y VAG VG + + A G + +A G LQ TNI+RD +D+
Sbjct: 202 VLDRYTYLVAGCVGEFWTDMTAAHTRAARGWDLVAMRDKGIRFGKALQMTNILRDCAKDL 261
Query: 219 NEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED-CLKYMSAL 277
I +C + P ++ + + DL + S +A L D++ AL D CL ++
Sbjct: 262 -RIGRC--YLPDDVLRAHALDVADLTSADASLRARGVLVDLLHVALDQYRDACLYTIAIP 318
Query: 278 RDHAIFRF-CAIPQIMAIGTLAL 299
R R C P ++ + TL L
Sbjct: 319 RRFVRLRLACLWPIMIGLETLEL 341
>gi|288555918|ref|YP_003427853.1| phytoene/squalene synthase [Bacillus pseudofirmus OF4]
gi|288547078|gb|ADC50961.1| triterpenoid carotenoid synthesis, phytoene/squalene synthase
[Bacillus pseudofirmus OF4]
Length = 279
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 19/237 (8%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
CY ++ + S++F L + RNAV Y R +D + D+ P + F
Sbjct: 11 CYEVIRRHSKTFTKAFGTLPKEKRNAVWAVYAFCREVDDIVDEGDNPKEELTHFEETFEL 70
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+ + + +F AF ++ +G +RM K+
Sbjct: 71 FLQRKLPLVESKWIALDDVFSRFEMDQVAFYDMIRG---------QRMDLEKTKYT---- 117
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
++++ + Y Y+VA VGL L + E L + ++GL +Q TNI+RD ED++
Sbjct: 118 -TLEELEHYSYHVASTVGLMLLPILAPKNHESLRAGGV--ALGLAMQLTNILRDVQEDLD 174
Query: 220 EIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
+ R++ P ++ K+ L DL N+ V+ ++ A M E L M
Sbjct: 175 ---RDRIYLPYDLMKKHGYSLVDLHMGINNSSFVKVFEEVAERAEMLYEQALDTMEG 228
>gi|335387277|gb|AEH57217.1| squalene synthase [Prochloron didemni P2-Fiji]
Length = 274
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 46/272 (16%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
+++LH SR+F++ I L + L+ AV YL +RA+D +ED PT K + +
Sbjct: 7 AFNLLHLTSRTFSIPINHLPSTLKEAVTSAYLCMRAIDQIEDH---PTLDKKLKVKLLSK 63
Query: 100 HVYDREWH--------FSCGTKEYKVLMDQFH-HVSTAFLELGKGYQDAIEDITKRMGAG 150
D + S G ++Y+ +++ + L I D T M
Sbjct: 64 ISLDLQSETDESLALVLSTGLEQYQNDLEEVSLRIGEWALLSPTSIAPRIWDATSAMAER 123
Query: 151 MAKFICKE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQK 207
MA ++ E + + D + Y + VAG VGL LS L+ + GT+ S + G LQ
Sbjct: 124 MAFWVDNEWAICNEKDLNRYTFSVAGTVGLLLSDLWCWYDGTQ--TDRSKAVGFGRGLQS 181
Query: 208 TNIIRDYLEDINEIPKCRM--FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALM 265
NI+R+ ED + R F+P + W+ DM A
Sbjct: 182 VNILRNCAED-----RARGVDFFP-DGWTT---------------------EDMHEYARK 214
Query: 266 HVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
++E Y S+L I FC IP I+A TL
Sbjct: 215 NLEIAKAYNSSLPKGPILDFCQIPLILADHTL 246
>gi|307150029|ref|YP_003885413.1| squalene/phytoene synthase [Cyanothece sp. PCC 7822]
gi|306980257|gb|ADN12138.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7822]
Length = 270
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 112/269 (41%), Gaps = 44/269 (16%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL------- 94
S+L + SR+F + I +L L+ AV YL +RA+D VED +++ K IL
Sbjct: 9 SVLKETSRTFYIPISRLPDQLQEAVASAYLCMRAIDEVEDHSALDNFTKARILRQISLNL 68
Query: 95 -IAFHRHVYDREWHFSCGTKEYK-VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
A D+ FS G Y+ VL + + L I D T M MA
Sbjct: 69 QAAVENSTVDK---FSVGLHSYQDVLPEVTLRLGEWVLLAPDTIAPRIWDATAAMADRMA 125
Query: 153 KFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTN 209
+ ++ + D D Y + VAG VGL L L+ + GT+ ++ G LQ N
Sbjct: 126 YWADNNWKITTESDLDRYTFSVAGAVGLLLCDLWAWYDGTQTNRTHAIGFGRG--LQAVN 183
Query: 210 IIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHVE 268
I R++ ED+ + F+P W + ED+ Y + K L D T +L H
Sbjct: 184 IARNHSEDLR---RGVDFFPSG-W-----RAEDIHAYARRNLK----LADYYTKSLPH-- 228
Query: 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
FC IP +A GTL
Sbjct: 229 -----------GPALDFCKIPLALAYGTL 246
>gi|302526349|ref|ZP_07278691.1| squalene synthase HpnD [Streptomyces sp. AA4]
gi|302435244|gb|EFL07060.1| squalene synthase HpnD [Streptomyces sp. AA4]
Length = 303
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C ++ + +R+F I+ L R A+C Y + R +D + DDT+ + K+ L
Sbjct: 25 YAHCAAVTKEQARNFYYGIRLLPPGKRAALCAVYALARIIDDIGDDTAASAETKLQGLAG 84
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVS---TAFLELGKGYQDAIE-DITKRMGAGMA 152
+ + D S Y + D AF EL D +E D+T R
Sbjct: 85 VRKALGDLS---STADPVYVAVADAARRYPIPLGAFEEL----LDGVEMDVTGR------ 131
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
E ++ EYC VAG VG L + S E AP ++ +G+ LQ+TNI+R
Sbjct: 132 -----EYVRFEELVEYCRCVAGSVGR-LCLGVFGSRPEPNAP-VYADELGIALQQTNILR 184
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLE---DLKYEENSDKAVQCLNDMVTNA 263
D ED+ R++ P+E ++ +L D K + ++D T A
Sbjct: 185 DIREDLL---NGRVYLPKEDLDRFGVELSVGPDGKLADPEGGLAALIHDSATRA 235
>gi|358462849|ref|ZP_09172957.1| squalene synthase HpnD [Frankia sp. CN3]
gi|357071124|gb|EHI80746.1| squalene synthase HpnD [Frankia sp. CN3]
Length = 316
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C + + +R+F+ I+ L D R A+ Y R LD + D +P + K L
Sbjct: 14 YAACEEITKQAARNFSWGIRLLPADRRGALSAVYAFSRRLDDI-GDGDLPDEQKSEGLAK 72
Query: 97 FHRHVYDREWHFSCGTKEYKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
+ R + L D +F AF+EL G + IE T
Sbjct: 73 ARADI--RGLDPNSSDPVIVALADAARRFPIPLEAFIELADGVESDIEPST--------- 121
Query: 154 FICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
E+ DD YC VAG +G LG+ A+ D AP ++++++G+ LQ+TNI
Sbjct: 122 -----YETFDDMVGYCRLVAGTIGRLSLGIFGTTEAAARGD-AP-AIADALGVALQQTNI 174
Query: 211 IRDYLEDI 218
+RD ED+
Sbjct: 175 LRDVREDL 182
>gi|302541343|ref|ZP_07293685.1| squalene synthase HpnD [Streptomyces hygroscopicus ATCC 53653]
gi|302458961|gb|EFL22054.1| squalene synthase HpnD [Streptomyces himastatinicus ATCC 53653]
Length = 316
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ +R+FA I+ L T+ R+A+ Y R +D + D ++P D K L
Sbjct: 19 YRYCEAVTGHQARNFAYGIKLLPTEKRHAMSALYAFSRRIDDI-GDGALPADAKRARLNQ 77
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAF-LELGKGYQDAIEDITKRMGAGMAKFI 155
R + DR + + + H + F + LG G + I+ + K +
Sbjct: 78 -TRALLDRIRGGAIEEDDTDPVAVALTHAARRFPIPLG-GLDELIDGVLKDVAG------ 129
Query: 156 CKEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDL--APDSLSNSMGLFLQKTNIIR 212
+ E+ DD +YC VAG +G L L G D AP+ +N++GL LQ TNI+R
Sbjct: 130 -ETYETWDDLKDYCRCVAGAIGRLSLGVFGTVPGARDASRAPE-YANTLGLALQLTNILR 187
Query: 213 DYLEDINEIPKCRMFWPREIWSKY 236
D ED R + P + +K+
Sbjct: 188 DVREDAA---TGRAYLPADDLAKF 208
>gi|332709855|ref|ZP_08429811.1| farnesyl-diphosphate farnesyltransferase [Moorea producens 3L]
gi|332351226|gb|EGJ30810.1| farnesyl-diphosphate farnesyltransferase [Moorea producens 3L]
Length = 272
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 41/268 (15%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
+L + SR+F + I L L+ +V YL +RA+D +EDD + K +L +
Sbjct: 9 GILKETSRTFYIPISCLPGGLQESVASAYLCMRAIDEIEDDFELDNPTKASLLRKISFGL 68
Query: 102 YDREWHFSCGTKEYKVLMDQFHH-VSTAFLELGKGYQDAIEDITKRM---GAGMAKFICK 157
FS E + + + + + +G+ A E I R+ A MA +
Sbjct: 69 QGIGNGFSA--SELSLALSKHEQPLPEVTIRIGEWAMLAPETIAPRIWEASAAMADRMAA 126
Query: 158 ------EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNI 210
E+ + D D Y Y VAG VGL LS L+ + GT+ S + G LQ NI
Sbjct: 127 WAECGWEINTEMDLDAYTYSVAGSVGLLLSDLWAWYDGTQ--TNRSYAVGFGRGLQAVNI 184
Query: 211 IRDYLEDIN-EIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
+R+ ED+ ++ W E KY + +L L D TNAL
Sbjct: 185 LRNRSEDLTRQVDFFPNGWGEEELHKYARR--NLS-----------LADAYTNAL----- 226
Query: 270 CLKYMSALRDHAIFRFCAIPQIMAIGTL 297
L++ FC IP +A TL
Sbjct: 227 -------LKNSPARNFCQIPLALAHATL 247
>gi|54293073|ref|YP_125488.1| hypothetical protein lpl0110 [Legionella pneumophila str. Lens]
gi|53752905|emb|CAH14340.1| hypothetical protein lpl0110 [Legionella pneumophila str. Lens]
Length = 345
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD---- 88
++F Y L VSRSF+ I QL + + V + YL+LR D++ED D +D
Sbjct: 6 FSFYYQHLENVSRSFSFCISQLTSPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAA 65
Query: 89 -----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDA 139
V+ P F + + G K+ +L+++ ++ + Q
Sbjct: 66 FKSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSV 119
Query: 140 IEDITKRMGAGMAKFI------CKEV-ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL 192
I+ I + + GM F+ CK V S+ ++YC++VAGLVG LS +F +
Sbjct: 120 IKTILQVVD-GMHYFLNHYHMECKIVFPSLVITNQYCFFVAGLVGKLLSHIFTDLLSNFK 178
Query: 193 APDSLSNS---MGLFLQKTNIIRDYLED 217
SL N G FLQK N+++D ++D
Sbjct: 179 WTASLLNQAFHFGFFLQKINLLKDKMDD 206
>gi|392988327|ref|YP_006486920.1| phytoene synthase [Enterococcus hirae ATCC 9790]
gi|392335747|gb|AFM70029.1| phytoene synthase [Enterococcus hirae ATCC 9790]
Length = 289
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 79/188 (42%), Gaps = 33/188 (17%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A+C S++ K S+SF L QL +V Y R D + I D L
Sbjct: 16 FAYCESIIKKNSKSFYLAFSQLPKRKAQSVYAVYAFCRRADDL-----IDRDNNQAGLRQ 70
Query: 97 FHRHVYDREWHFSCGT-------KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
R + D F+ G + V+ D F V+ F ++ G +R A
Sbjct: 71 LERQLLD----FNEGKVPNDPVWRALSVVFDNFPMVTAPFFDMLTG---------QRKDA 117
Query: 150 GMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTN 209
K+ E+ D +EYCYYVAG VGL L L + + P + +G +Q TN
Sbjct: 118 DF-----KQPETRKDLEEYCYYVAGSVGLMLLPLLTERPADIVVP---AKKLGEAMQLTN 169
Query: 210 IIRDYLED 217
I+RD ED
Sbjct: 170 ILRDVGED 177
>gi|427719394|ref|YP_007067388.1| farnesyl-diphosphate farnesyltransferase [Calothrix sp. PCC 7507]
gi|427351830|gb|AFY34554.1| farnesyl-diphosphate farnesyltransferase [Calothrix sp. PCC 7507]
Length = 276
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 110/278 (39%), Gaps = 42/278 (15%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL----- 94
+L SR+F + I L L+ AV YL +RA+D +ED ++ KV +L
Sbjct: 7 ALQILKDTSRTFYIPISILPPGLQEAVASAYLCMRAIDEIEDHPALDNRTKVKLLRTISL 66
Query: 95 ---IAFHRHVYDREWHFSCGTKEYK-VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
D FS G ++ L + + + + I D T M
Sbjct: 67 TLQAGVDGFAVD---AFSLGFNGHENTLAEVTLRIREWSILAPEAIAPRIWDATAAMADR 123
Query: 151 MAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQK 207
MA + K ++++ D D Y + VAG VGL LS L+ + GT+ ++ G LQ
Sbjct: 124 MADWAEKNWKIQTESDLDRYTFGVAGAVGLLLSDLWAWYDGTQSNRTQAIGFGRG--LQA 181
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI+R++ ED+ K F+P + WS DM A ++
Sbjct: 182 VNILRNHTEDLKRGVK---FFP-DGWSAA---------------------DMHEYARRNL 216
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
Y + L FC IP +A GTL N E
Sbjct: 217 LLANAYTNTLPTGPALDFCQIPLTLAHGTLDALANGKE 254
>gi|407796546|ref|ZP_11143499.1| Phytoene synthase [Salimicrobium sp. MJ3]
gi|407019062|gb|EKE31781.1| Phytoene synthase [Salimicrobium sp. MJ3]
Length = 280
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 34/274 (12%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E +A C++++ S++FA L D + AV Y R +D V D+ P +
Sbjct: 7 EQAYAKCHTVIKNHSKTFAKAFSYLPRDRKRAVWAVYGFCRHVDDVVDEGENPVRELAEV 66
Query: 94 ---LIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
LI F R + HF + + +F F ++ +G + +ED+
Sbjct: 67 KEELIRFERRGEVPQRHFWIALDDVR---RKFDLDLAPFHDMIRGQETDLEDV------- 116
Query: 151 MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
E+ ++D+ Y Y VA VGL L + E L D++ +G +Q TNI
Sbjct: 117 -------EMITMDELLTYSYNVASTVGLMLLPILAPGKCEVLKQDAI--YLGYAMQLTNI 167
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+RD ED + + R++ PRE + + E+L + S + + + A + E
Sbjct: 168 LRDVGED---LARERIYIPREHYEAFGYTREELISKTKSAEFIMAWESLAEKAESYYE-- 222
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNI 304
K M++L ++ + + + AL Y NI
Sbjct: 223 -KAMTSLNEY------PVTSRLPVKGAALLYMNI 249
>gi|406834007|ref|ZP_11093601.1| phytoene synthase [Schlesneria paludicola DSM 18645]
Length = 359
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 22/285 (7%)
Query: 8 LRHPDDLYPLLKLKMASR--QAEKQIPP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRN 64
LR P +P ++ R QA++ +P + FC + + + +F L + R
Sbjct: 19 LRQP--FHPPRAGRVERREIQAKRTMPSLSESYEFCRKLTRRTAHNFRFSFLTLPEEKRR 76
Query: 65 AVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHH 124
A+ Y R D + DDT + ++ L + + V +C + M H
Sbjct: 77 AMEALYAFNRITDDLGDDTGMTLQLRKVRLGTWRQAV---RVALNCRDERVAPGMATTGH 133
Query: 125 VST--------AFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLV 176
++T A ++ + +Q E + + + + ++ + + + YCY+VAG V
Sbjct: 134 LATFGDHPALPAISDMVQRHQIPPEYLFAVIDGVESDLVSLDISTFRELERYCYHVAGAV 193
Query: 177 GLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
GL ++ G E + L+ GL Q TNI+RD ED R++ PRE ++
Sbjct: 194 GLCCIHVWGFHGDEAI---PLAIDCGLAFQLTNILRDIKEDAE---VGRIYLPREDLDRF 247
Query: 237 VNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHA 281
E L+ E ++ ++ ++ A +H E L H
Sbjct: 248 SYSEESLRSHEINEPFMELMSFETARAQVHYEKAEMLFDYLEPHG 292
>gi|440680158|ref|YP_007154953.1| farnesyl-diphosphate farnesyltransferase [Anabaena cylindrica PCC
7122]
gi|428677277|gb|AFZ56043.1| farnesyl-diphosphate farnesyltransferase [Anabaena cylindrica PCC
7122]
Length = 351
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 143/345 (41%), Gaps = 64/345 (18%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV-- 101
++KVSRSFALV L L + I YL+ R D +ED P + + F R +
Sbjct: 18 MNKVSRSFALVTPCLEEPLDAFMSIAYLIFRVADNIED-CQKPFEWQRCRFNEFKRLLKE 76
Query: 102 ------------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQ---DAIEDITKR 146
+D W + KE LM H L L K Y D++ +I R
Sbjct: 77 PNVAPDILSNWSFDDWWGLNTDQKE---LMTLEHG-----LMLWKIYALVPDSVREIIAR 128
Query: 147 MGAGMAKFICKEVESI-----------------DDYDEYCYYVAGLVGLGLSKL---FYA 186
M + I K ++ +DY YCY+ AG VGL ++L Y
Sbjct: 129 WAEAMVEGIEKILDDQQKPLMVTRNGVRILAEENDYSSYCYFAAGTVGLMGTELAIDHYQ 188
Query: 187 SGTEDLAPDSLSNSM--GLFLQKTNIIRDYLEDI-NEIPKCRMFWPREIWSKYVNKLEDL 243
T D A LS+S G LQKTNI++D+ ED+ N I C + ++W + + L L
Sbjct: 189 FNT-DTAKGLLSHSQTCGQALQKTNIVKDFPEDLANGI--CYL---PDVWIQEADNLP-L 241
Query: 244 KYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAI-FRF----CAIPQIMAIGTLA 298
+ K Q ++ N + + + + Y+ + A+ +R C +P + + A
Sbjct: 242 LLKGAPKKWTQ---KILGNVMTEINNSVSYVIDIPYEAVGYRLASLMCLLPAYQTLLSAA 298
Query: 299 LCYNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILK 343
++ + VK+ R +K ++ M A D+S L+
Sbjct: 299 EQHDKLFTPEHSVKISRSCFSKCMEDAKFMVRDNNALLDYSQKLQ 343
>gi|170735641|ref|YP_001776901.1| squalene/phytoene synthase [Burkholderia cenocepacia MC0-3]
gi|169817829|gb|ACA92411.1| Squalene/phytoene synthase [Burkholderia cenocepacia MC0-3]
Length = 355
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R+ V + YL+ RA DT+ D + D + +L R
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDL-RDDI 72
Query: 103 DREWHFSCGTKEY----KVLMDQFHHVSTAFLE----LGKGYQDA----IEDITKRMGAG 150
+R + ++ ++ D H+ +E L + +A I + + AG
Sbjct: 73 ERLGDGAALSRSLEDVTRMQTDSHEHLLLGSMEPMLALLRAQPEADRASIRKVVATLTAG 132
Query: 151 MAKFICK--------EVESI---DDYDEYCYYVAGLVGLGLSKLF----YASGTEDLAPD 195
M +F + +V S+ D D Y Y VAG VG + + A+ DL PD
Sbjct: 133 M-EFDLRTFPHEQSGQVASLPTRDMLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDL-PD 190
Query: 196 SLSNSM--GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
+ G LQ TNI+RD +D+ I +C + P ++ + + DL E S++A
Sbjct: 191 MREKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPDDVLGAHGLVVADLMQPEASERAR 247
Query: 254 QCLNDMVTNALMHVED-CLKYMSALRDHAIFRF-CAIPQIMAIGTLALCYNN 303
L D++ AL D CL ++ R R C P ++ + TL L +
Sbjct: 248 GVLVDLLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGH 299
>gi|354554571|ref|ZP_08973875.1| Squalene/phytoene synthase [Cyanothece sp. ATCC 51472]
gi|353553380|gb|EHC22772.1| Squalene/phytoene synthase [Cyanothece sp. ATCC 51472]
Length = 270
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 50/270 (18%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L SR+F + I +L L++AV YL +RA+D VED + K IL ++
Sbjct: 11 LRDTSRTFYIPISRLPGGLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLNL-- 68
Query: 104 REWHFSCGTKEYKVLMDQFHH-VSTAFLELGKGYQDAIEDITKRM---GAGMAKFICKEV 159
+ G +++ V + + H + L LG+ A E I R+ A MA +
Sbjct: 69 QAAVEMSGIEDFSVGLVPYSHCLPDVSLRLGQWAMLAPETIAPRVWDATASMADRMAYWA 128
Query: 160 E------SIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
E + D+Y + VAG VGL LS L+ + GT+ + G LQ NI+R
Sbjct: 129 ENNWTIRTKAHLDQYTFSVAGAVGLLLSDLWAWYDGTQ--TNRQYAIGFGRGLQAVNIVR 186
Query: 213 DYLED----INEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHV 267
++ ED +N IP+ W K+ED+ +Y ++ K L D+
Sbjct: 187 NHREDLRRGVNFIPQG--------W-----KIEDVHQYARDNLK----LADL-------- 221
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L FC IP +A GTL
Sbjct: 222 -----YTQSLGPGPALDFCKIPLALAHGTL 246
>gi|86739533|ref|YP_479933.1| squalene/phytoene synthase [Frankia sp. CcI3]
gi|86566395|gb|ABD10204.1| Squalene/phytoene synthase [Frankia sp. CcI3]
Length = 304
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C ++ + +R+F+ I+ L + R A+ Y + R LD + D +P + K L
Sbjct: 18 YAACEAVTKEAARNFSYGIRLLPAEKRGALSAVYALARRLDDI-GDGDLPEEAKFAGLAQ 76
Query: 97 FHRHVYDREWHFSCGTKEYKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
V + + S + L D +F AF+EL G + + T
Sbjct: 77 VRAEVEELGTN-SSDDPVFVALADAARRFPIPLEAFIELADGVESDVRGTT--------- 126
Query: 154 FICKEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
++ DD YC VAG +G L L T +++++G+ LQ+TNI+R
Sbjct: 127 -----YDTFDDLVGYCRLVAGTIGRLSLGIFGSERATSHRDASGVADALGVALQQTNILR 181
Query: 213 DYLEDINEIPKCRMFWPRE 231
D ED+ R++ PR+
Sbjct: 182 DVREDLL---GGRIYLPRQ 197
>gi|186683196|ref|YP_001866392.1| squalene/phytoene synthase [Nostoc punctiforme PCC 73102]
gi|186465648|gb|ACC81449.1| Squalene/phytoene synthase [Nostoc punctiforme PCC 73102]
Length = 276
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 109/288 (37%), Gaps = 68/288 (23%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I L L+ AV YL +RA+D +ED I K +L + +
Sbjct: 10 ILKETSRTFYIPISLLPPGLQEAVASAYLCMRAIDEIEDHPEIDNATKAKLLRSISLTL- 68
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRM--------------- 147
G + V AF GY++ +E++T R+
Sbjct: 69 ------QAGVDGFAV---------EAFFTGFNGYENTLEEVTLRIREWLLLAPETIAPRI 113
Query: 148 ---GAGMAKFICKEVE------SIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSL 197
A M+ + E + D D Y + VAG VGL LS L+ + GT+ ++
Sbjct: 114 WDATAAMSDRMAYWSERNWKIYTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQTNRTQAI 173
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
G LQ NI+R++ ED+ + F+P E WS
Sbjct: 174 GFGRG--LQAVNILRNHTEDLR---RGVDFFP-EGWSA---------------------E 206
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
+M A ++ Y L FC IP +A GTL N E
Sbjct: 207 NMQEYARRNLALAEAYTKGLPTGPALDFCQIPLTLANGTLDALANGKE 254
>gi|172036758|ref|YP_001803259.1| putative terpenoid synthase [Cyanothece sp. ATCC 51142]
gi|171698212|gb|ACB51193.1| putative terpenoid synthase [Cyanothece sp. ATCC 51142]
Length = 273
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 50/270 (18%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L SR+F + I +L L++AV YL +RA+D VED + K IL ++
Sbjct: 14 LRDTSRTFYIPISRLPGGLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLNL-- 71
Query: 104 REWHFSCGTKEYKVLMDQFHH-VSTAFLELGKGYQDAIEDITKRM---GAGMAKFICKEV 159
+ G +++ V + + H + L LG+ A E I R+ A MA +
Sbjct: 72 QAAVEMSGIEDFSVGLVPYSHCLPDVSLRLGQWAMLAPETIAPRVWDATASMADRMAYWA 131
Query: 160 E------SIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
E + D+Y + VAG VGL LS L+ + GT+ + G LQ NI+R
Sbjct: 132 ENNWTIRTKAHLDQYTFSVAGAVGLLLSDLWAWYDGTQ--TNRQYAIGFGRGLQAVNIVR 189
Query: 213 DYLED----INEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHV 267
++ ED +N IP+ W K+ED+ +Y ++ K L D+
Sbjct: 190 NHREDLRRGVNFIPQG--------W-----KIEDVHQYARDNLK----LADL-------- 224
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L FC IP +A GTL
Sbjct: 225 -----YTQSLGPGPALDFCKIPLALAHGTL 249
>gi|317130670|ref|YP_004096952.1| Phytoene synthase [Bacillus cellulosilyticus DSM 2522]
gi|315475618|gb|ADU32221.1| Phytoene synthase [Bacillus cellulosilyticus DSM 2522]
Length = 279
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ C ++ S+SF+ Q L + R AV Y R +D + D+ + P
Sbjct: 7 YKMCQQVMEHHSKSFSKAFQLLPLEKRQAVWAIYAFCRTVDDIVDEGTNPVTELNDFKTN 66
Query: 97 FHRHVYDREWHFSCGTKE-----YKVLMDQFHHVS---TAFLELGKGYQDAIEDITKRMG 148
F + F GT + + L D F FL++ KG + M
Sbjct: 67 FEQ--------FRNGTIDESDYLWIALNDTFSKFDFDIQPFLDMVKG---------QEMD 109
Query: 149 AGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKT 208
+++ ++++ ++Y YYVA VGL L + E L P ++ S+GL +Q T
Sbjct: 110 LYKSRY-----NTMEELEQYAYYVASTVGLMLLPILSPENKEQLRPSAI--SLGLAMQIT 162
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKY 236
NI+RD ED++ + R++ P+++ K+
Sbjct: 163 NILRDIGEDLD---RDRIYIPKDLRDKH 187
>gi|218245378|ref|YP_002370749.1| squalene/phytoene synthase [Cyanothece sp. PCC 8801]
gi|257058414|ref|YP_003136302.1| squalene/phytoene synthase [Cyanothece sp. PCC 8802]
gi|218165856|gb|ACK64593.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8801]
gi|256588580|gb|ACU99466.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8802]
Length = 270
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 105/271 (38%), Gaps = 50/271 (18%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I +L L+ AV YL +RA+D VED + K +L ++
Sbjct: 10 ILKETSRTFYIPISRLPDRLQEAVASAYLCMRAIDEVEDHPDLDNFTKAQLLRRMSLNLQ 69
Query: 103 -----DREWHFSCGTKEYKV-LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R FS G Y L D V L I D T M MA +
Sbjct: 70 AGSEKARVEDFSAGLMPYNACLPDVTLRVGEWALLAPDSIAPRIWDATAAMADRMAYWAE 129
Query: 157 KE--VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI+R+
Sbjct: 130 NNWTIRTEAHLDQYTFSVAGAVGLLLSDLWAWYDGTQ--TNRSYAIGFGRGLQAVNIVRN 187
Query: 214 YLED----INEIPKCRMFWPREIWSKYVN---KLEDLKYEENSDKAVQCLNDMVTNALMH 266
+ ED +N +P+ W + +Y KL DL
Sbjct: 188 HREDLRRGVNFLPQG---WNEQDVHQYARRNLKLADL----------------------- 221
Query: 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L FC IP +A GTL
Sbjct: 222 ------YTKSLPSGPALDFCKIPLALAYGTL 246
>gi|297172092|gb|ADI23074.1| phytoene/squalene synthetase [uncultured gamma proteobacterium
HF0770_07M15]
Length = 333
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 28/279 (10%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSR+F L ++ L +R + + YL+ R DT+ D +P ++ L F +
Sbjct: 14 ILRDVSRAFYLTLRVLPAAVRPQIGLAYLLARITDTIADTDLVPPADRLQTLQQFRARIR 73
Query: 103 D---REWHFSCGTKEYKVLMD-QFHHVSTAFLEL-------GKG-YQDAIEDITKRMGAG 150
D FS KE + + + S+ LEL +G Q +E IT+
Sbjct: 74 DDAAPPVDFSRLAKEQENPAEAKLLLRSSEALELLDQLTPSDRGQVQIVLETITRGQEQD 133
Query: 151 MAKF----ICKEVESIDDYDEYCYYVAGLVGLGLSKL-----FYASGTEDLAPDSLSNSM 201
+ +F +++ DD D+Y Y VAG VG ++L F + ++ A + +
Sbjct: 134 LERFGDGSTLTALQTADDLDDYTYRVAGCVGEFWTRLTRTHCFPNAQLDNTAFVADAIRF 193
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 261
G LQ NI+RD D+ R + P + + EDL+ N K +T
Sbjct: 194 GKGLQLVNILRDLPRDLA---NGRCYLPAVDLAMAGLQPEDLRDPANWPKLQPVFEPWLT 250
Query: 262 NALMHVEDCLKYMSALRDHAIFRF---CAIPQIMAIGTL 297
A H+ +Y A+ H +R CA P ++ TL
Sbjct: 251 RARDHLTAGGRYTLAI-PHTHYRLRLACAWPILIGTATL 288
>gi|428221279|ref|YP_007105449.1| phytoene/squalene synthetase [Synechococcus sp. PCC 7502]
gi|427994619|gb|AFY73314.1| phytoene/squalene synthetase [Synechococcus sp. PCC 7502]
Length = 270
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTDV--KVPILIA 96
+L + SR+F + I +L + L+ AV YL +RA+D +ED D +I +D+ KV I++
Sbjct: 10 VLKETSRTFYIPISRLPSGLQEAVTSAYLCMRAIDEIEDHPSLDNAIKSDLLQKVSIVLQ 69
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + + + VL + + + + D T M MA +
Sbjct: 70 SGRDSFALNAFANALSTHDHVLPEVSLRIGEWAMMAPASIAPRVWDATAAMSDRMAYWAN 129
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ ++ S D D Y + VAG VGL LS L+ + GT+ ++ G LQ NI+R+
Sbjct: 130 RNWQIHSEIDLDGYTFSVAGAVGLLLSDLWAWYDGTQTNRIQAIGYGRG--LQTVNILRN 187
Query: 214 YLEDI----NEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
ED+ + +P + W+K EDL + A L D+
Sbjct: 188 RSEDLLRGADLVP--------DGWNK-----EDLIDYARRNLA---LGDI---------- 221
Query: 270 CLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDR 324
Y AL + FC IP +A TL + G K+ R +I+R
Sbjct: 222 ---YTKALPRGPVLDFCQIPLTLAHATLE------AIAHGADKLTRSNVMALIER 267
>gi|336177209|ref|YP_004582584.1| squalene synthase [Frankia symbiont of Datisca glomerata]
gi|334858189|gb|AEH08663.1| squalene synthase HpnD [Frankia symbiont of Datisca glomerata]
Length = 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E +A C ++ + +R+FA I+ L D R A+ Y R LD + D +P + K I
Sbjct: 13 EEAYASCEALTREAARNFAYGIRLLPVDKRAALSAVYAFARRLDDI-GDGDLPLEEKA-I 70
Query: 94 LIAFHRHVYDREWHFSCGTKEYKVLMD----QFHHVSTAFLELGKGYQDAIEDITKRMGA 149
+A R D + + + +D +F AF EL G + + +T
Sbjct: 71 RLAAARA--DITGLGAASSDPVLIALDDACRRFPIPVDAFCELIDGVEMDLRGVT----- 123
Query: 150 GMAKFICKEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDLAPDSLSNSMGLFLQKT 208
ES DD EYC VAG +G L L + D ++++ +G+ LQ+T
Sbjct: 124 ---------YESFDDLVEYCRRVAGTIGRLSLGIFGTQAAHADAGAATVADELGIALQQT 174
Query: 209 NIIRDYLEDINEIPKCRMFWPR 230
NI+RD ED+ R++ PR
Sbjct: 175 NILRDVREDLI---TGRIYLPR 193
>gi|434404377|ref|YP_007147262.1| phytoene/squalene synthetase [Cylindrospermum stagnale PCC 7417]
gi|428258632|gb|AFZ24582.1| phytoene/squalene synthetase [Cylindrospermum stagnale PCC 7417]
Length = 276
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 110/278 (39%), Gaps = 48/278 (17%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL-------- 94
+L + SR+F + I L + L+ AV YL +RA+D +ED + K +L
Sbjct: 10 ILKETSRTFYIPISILPSGLQEAVASAYLCMRAIDEIEDHPELDNATKRQLLRNISLTLQ 69
Query: 95 IAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELG----KGYQDAIEDITKRMGAG 150
D FS G Y+ VS E + I D T M
Sbjct: 70 AGVDGFAVD---AFSVGFSGYEA---SLAEVSVRIREWSILAPESIAPRIWDATAAMADR 123
Query: 151 MAKFICK--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQK 207
MA + + ++++ D D Y + VAG VGL LS L+ + GT ++ + G LQ
Sbjct: 124 MADWSERNWKIDTESDLDRYTFGVAGAVGLLLSDLWSWYDGTSTNRTQAI--AFGRGLQA 181
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHV 267
NI+R++ ED+ + F+P + +E + + + +
Sbjct: 182 VNILRNHSEDLK---RGVDFYP--------TGWNNTNLQEYARRNLALAD---------- 220
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
Y S+L + FC IP +A GTL N E
Sbjct: 221 ----AYTSSLPAGPVLHFCQIPLTLAHGTLEALANGKE 254
>gi|297203850|ref|ZP_06921247.1| squalene synthase HpnD [Streptomyces sviceus ATCC 29083]
gi|297148512|gb|EDY55938.2| squalene synthase HpnD [Streptomyces sviceus ATCC 29083]
Length = 316
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 29 KQIPPEPH--------WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVE 80
+ + P PH +++C ++ + +R+FA I+ L T R A+ Y R +D +
Sbjct: 3 RTVEPPPHTSAPVLAAYSYCEAVTGQQARNFAYGIRLLPTSKRRAMSALYAFSRRVDDI- 61
Query: 81 DDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
D ++ DVK L R + R +E V D V+ A + + +
Sbjct: 62 GDGALAGDVKAARL-EDTRAMLTR-------VREGSVAEDDTDPVAVALAHAAETFPIPL 113
Query: 141 EDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSL 197
+ + + + + E+ DD YC VAG +G LG+ + + AP+
Sbjct: 114 SGLDELIDGVLMDVRGETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARAAERAPE-Y 172
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED + R + P + +K+
Sbjct: 173 ADTLGLALQLTNILRDVREDAED---GRTYLPADDLAKF 208
>gi|307608855|emb|CBW98251.1| hypothetical protein LPW_01101 [Legionella pneumophila 130b]
Length = 345
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 34/207 (16%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD----- 88
+F Y L VSRSF+ I QL + + V + YL+LR D++ED D +D
Sbjct: 7 SFYYQHLENVSRSFSFCISQLTSPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAAF 66
Query: 89 ----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAI 140
V+ P F + + G K+ +L+++ ++ + Q I
Sbjct: 67 KSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSVI 120
Query: 141 EDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+ I + + GM F+ + S+ ++YC++VAGLVG LS +F +
Sbjct: 121 KTILQVVD-GMHYFLNQYHMEGKIVFPSLVTTNQYCFFVAGLVGKLLSHIFTDLLSNFKW 179
Query: 194 PDSLSNS---MGLFLQKTNIIRDYLED 217
SL N G FLQK N+++D ++D
Sbjct: 180 TASLLNQAFHFGFFLQKINLLKDKMDD 206
>gi|172063188|ref|YP_001810839.1| squalene/phytoene synthase [Burkholderia ambifaria MC40-6]
gi|171995705|gb|ACB66623.1| Squalene/phytoene synthase [Burkholderia ambifaria MC40-6]
Length = 354
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R V + YL+ RA DT+ D + + + +L R
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRAALLTDL-RDEI 72
Query: 103 DREWHFSCGTKEY----KVLMDQFHHVSTA----FLELGKGYQDA----IEDITKRMGAG 150
+R + ++ ++ D H+ A L L + DA I + + +G
Sbjct: 73 ERLGDGAALSRALEDVTRMQTDSHEHMLLASMKPMLALLRAQPDADRASIRKVVATLTSG 132
Query: 151 MAKFICK-----------EVESIDDYDEYCYYVAGLVG-----LGLSKLFYASGTEDLAP 194
M +F + + S D+ D Y Y VAG VG + + A G +
Sbjct: 133 M-EFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHTRAARGWDFADM 191
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
G LQ TNI+RD +D+ I +C + P ++ +++ + DL + S +A
Sbjct: 192 REKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPDDVLAEHRIGVADLMSPDASARARG 248
Query: 255 CLNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLAL 299
L +++ L D Y A+ R R C P ++ + TLAL
Sbjct: 249 VLVELLRTTLAQYRDACFYTQAIPRRFVRLRLACLWPIMIGLETLAL 295
>gi|425470809|ref|ZP_18849669.1| Squalene/phytoene synthase [Microcystis aeruginosa PCC 9701]
gi|389883420|emb|CCI36177.1| Squalene/phytoene synthase [Microcystis aeruginosa PCC 9701]
Length = 269
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKSQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
E +F+ G ++L + + L + D T M MA +
Sbjct: 69 QAGTENSTEENFAFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEIELDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L + FC IP +A GTL
Sbjct: 222 TQSLPNGPALDFCKIPLALAHGTL 245
>gi|294632399|ref|ZP_06710959.1| squalene synthase HpnD [Streptomyces sp. e14]
gi|292835732|gb|EFF94081.1| squalene synthase HpnD [Streptomyces sp. e14]
Length = 316
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ + +R+FA I+ L T R A+ Y R +D + D ++ DVK L
Sbjct: 19 YSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDI-GDGALADDVKAARL-K 76
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + DR ++ V D V+ A + + ++ + + + +A
Sbjct: 77 DTRALLDR-------IRDGAVEDDDTDPVAVALAHAARSFPIPLDGLDELIDGVLADVRG 129
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ E+ DD YC VAG +G LG+ + + AP+ ++++GL LQ TNI+RD
Sbjct: 130 ETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARGAERAPE-YADTLGLALQLTNILRD 188
Query: 214 YLEDINEIPKCRMFWPREIWSKY 236
ED R + P + +K+
Sbjct: 189 IREDAE---GGRTYLPADDLAKF 208
>gi|158317464|ref|YP_001509972.1| squalene/phytoene synthase [Frankia sp. EAN1pec]
gi|158112869|gb|ABW15066.1| Squalene/phytoene synthase [Frankia sp. EAN1pec]
Length = 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C ++ + +R+F+ I+ L + R A+ Y + R LD + D +P + K+ L
Sbjct: 15 YASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDI-GDGDLPDEEKLAGLEK 73
Query: 97 FHRHVYDREWHFSCGTKEYKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
V R + L D +F AF+EL G + + +
Sbjct: 74 VRADV--RVLDINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHGVP--------- 122
Query: 154 FICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPDSLSNSMGLFLQKTNIIR 212
E+ DD YC VAG +G +F G+ D +++++G+ LQ+TNI+R
Sbjct: 123 -----YETFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSAEIADALGVALQQTNILR 177
Query: 213 DYLEDI 218
D ED+
Sbjct: 178 DVREDL 183
>gi|456062525|ref|YP_007501495.1| squalene/phytoene synthase [beta proteobacterium CB]
gi|455439822|gb|AGG32760.1| squalene/phytoene synthase [beta proteobacterium CB]
Length = 325
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 33 PEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVP 92
P A+ ++L VSR+FAL I L + V YL+ R +DT+ED + K
Sbjct: 7 PNSDLAYQKAILGSVSRTFALTIPLLPPAIEVVVGNTYLLCRIIDTIEDAAELSPIEKQE 66
Query: 93 ILIAFHRHVYD----REWHFSC--GTKEYKVL--MDQFHHVSTAFLELGKGYQDAIEDIT 144
+ F V + C K Y + +D H T L + + DA +
Sbjct: 67 LSKLFLEAVLGVIPVETFVSPCLEALKNYSNVDELDLIAHTPTV-LRILHTFPDADQAAI 125
Query: 145 KR----MGAGMAKFICKEVES----IDDYDEYCYYVAGLVGLGLSKLF------YASGTE 190
R M GM+ F ++ + + +++EYCY VAG+VG L+ +F +A E
Sbjct: 126 SRCVSIMSDGMSHFHGRQTQEGLKDLAEFEEYCYVVAGVVGELLTSIFSNYSAEFAKQIE 185
Query: 191 DLAPDSLSNSMGLFLQKTNIIRDYLED 217
+ L+ + G LQ TNI++D D
Sbjct: 186 --GHEQLAIAFGQALQMTNILKDSPAD 210
>gi|312199713|ref|YP_004019774.1| squalene synthase [Frankia sp. EuI1c]
gi|311231049|gb|ADP83904.1| squalene synthase HpnD [Frankia sp. EuI1c]
Length = 309
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C + + +++F+ I+ L D R A+ Y R LD + D +P D KV L
Sbjct: 14 YAACEEITKQAAKNFSYGIRLLPADRRAALSAVYAFSRRLDDI-GDGDLPDDQKVEGLAK 72
Query: 97 FHRHVYDREWHFSCGTKEYKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
+ R + L D +F AF+EL G + I
Sbjct: 73 ARADI--RGLDPNSSDPVLVALADAAKRFPIPLEAFIELADGVESDI------------- 117
Query: 154 FICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
+ ++ DD YC VAG +G LG+ A+ D AP ++++++G+ LQ+TNI
Sbjct: 118 -VPSTYDTFDDMVGYCRLVAGTIGRLSLGIFGTTEAASRRD-AP-AIADALGVALQQTNI 174
Query: 211 IRDYLEDI 218
+RD ED+
Sbjct: 175 LRDVREDL 182
>gi|288922393|ref|ZP_06416583.1| squalene synthase HpnD [Frankia sp. EUN1f]
gi|288346264|gb|EFC80603.1| squalene synthase HpnD [Frankia sp. EUN1f]
Length = 300
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C ++ + +R+F+ I+ L + R A+ Y + R LD + D +P + K+ L
Sbjct: 15 YASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDI-GDGDLPAEEKLAGLAK 73
Query: 97 FHRHVYDREWHFSCGTKEYKVLMD---QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
+ R + L D +F AF+EL G + + T
Sbjct: 74 VRADI--RALDTNSSDPVMVALADTARRFPIPIEAFIELTDGVESDVHGAT--------- 122
Query: 154 FICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
E+ +D YC VAG +G LG+ L ++G D +++++G+ LQ+TNI
Sbjct: 123 -----YETFEDMVGYCRLVAGTIGRLSLGIFGLEGSAG--DARAAEIADALGVALQQTNI 175
Query: 211 IRDYLEDI 218
+RD ED+
Sbjct: 176 LRDVREDL 183
>gi|225025000|ref|ZP_03714192.1| hypothetical protein EIKCOROL_01889 [Eikenella corrodens ATCC
23834]
gi|224942230|gb|EEG23439.1| hypothetical protein EIKCOROL_01889 [Eikenella corrodens ATCC
23834]
Length = 283
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 17/238 (7%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ + SF + L + R A+ + Y R LD V DD + P +A+
Sbjct: 6 YCHQKAEESGSSFLAGFRFLLPEKRRAMTVLYAYCRELDDVADDCADPAVAAQ--TLAWW 63
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
R + +H + + H V+ A E+ Y ++ +
Sbjct: 64 RQDAAKVFHGAALPE---------HPVNQAMREVAPAYGLPENELAAVIDGVEMDLTPAR 114
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
+YC VAG+VG ++++ G +D A ++ MGL LQ TNIIRD ED
Sbjct: 115 YADFATLQQYCQRVAGVVGRLIARIL---GFQDAAVLDYADKMGLALQLTNIIRDVGEDA 171
Query: 219 NEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
R++ P E ++ DL NS + + + V A + + + A
Sbjct: 172 V---AGRIYLPVEDLQRFNVPAADLLQRRNSQEFAELMAFQVARARQTYSEAVALLPA 226
>gi|417644772|ref|ZP_12294733.1| dehydrosqualene synthase [Staphylococcus warneri VCU121]
gi|445058700|ref|YP_007384104.1| squalene desaturase [Staphylococcus warneri SG1]
gi|330684459|gb|EGG96181.1| dehydrosqualene synthase [Staphylococcus epidermidis VCU121]
gi|443424757|gb|AGC89660.1| squalene desaturase [Staphylococcus warneri SG1]
Length = 287
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTD---VKVPI 93
+ +C+ ++ K S+SF+ L R AV Y V R +D D+ P +K I
Sbjct: 8 YKYCHQIMKKHSKSFSYAFDLLPESERRAVWAVYAVCRIIDDSIDEEQNPQKLQAIKEDI 67
Query: 94 LIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
+ + V D F + +M F+ S + + + + IE + + M
Sbjct: 68 QLIESQQV-DSTVQFKSNQR----IMLAFYDTSQNYKMEYQSFYNLIESVFEDEHFEM-- 120
Query: 154 FICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
F+ E + YCY VAG VG LS + + + ++ +G LQ TNI+RD
Sbjct: 121 FVKDE-----ELMRYCYGVAGTVGEVLSPILTEQPSHETY--EVARELGEALQLTNILRD 173
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
ED K R+++ RE+ ++Y +ED+ ++ +D +
Sbjct: 174 VGEDFE---KGRIYFSREMLNQYDVNIEDVYQQQLTDNYI 210
>gi|359147662|ref|ZP_09180947.1| probable phytoene synthase [Streptomyces sp. S4]
Length = 317
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ +R+FA I+ L R A+ Y R +D + D T P +VK L A
Sbjct: 19 YSYCETVTGSEARNFAYGIRLLPVAERRAMSALYAFSRRVDDIGDGTLAP-EVKADRLGA 77
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + DR ++ KV D V+ A + + + + + + + +
Sbjct: 78 -TRDILDR-------IRDGKVDEDDTDPVAVALADAARRFPIPLGGLDELIDGVLMDVKG 129
Query: 157 KEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDLAPDSL--SNSMGLFLQKTNIIRD 213
E+ DD YC VAG +G L L A G A + ++++GL LQ TNI+RD
Sbjct: 130 VTYETWDDLKLYCRCVAGAIGRLSLGIFGPAPGAPQTAEKAAEYADTLGLALQLTNILRD 189
Query: 214 YLEDINEIPKCRMFWPREIWSKY 236
ED R + P + +K+
Sbjct: 190 VREDAG---NGRTYLPADDLAKF 209
>gi|428300342|ref|YP_007138648.1| farnesyl-diphosphate farnesyltransferase [Calothrix sp. PCC 6303]
gi|428236886|gb|AFZ02676.1| farnesyl-diphosphate farnesyltransferase [Calothrix sp. PCC 6303]
Length = 274
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 119/280 (42%), Gaps = 68/280 (24%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I +L L+ V YL +RA+D VED ++ + K IL R +
Sbjct: 10 ILKETSRTFYIPIVRLPRCLQEGVASAYLCMRAIDEVEDHPTLDVESKAKIL----RKI- 64
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRM--------------- 147
+ + +D F V+ AF + GY+D + ++T R+
Sbjct: 65 ---------SLTLQAGVDGF--VADAFADSFYGYEDILPEVTLRIREWSILAPETIAPRI 113
Query: 148 ---GAGMAKFICKEVE---SID---DYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSL 197
A M++ + E ID D D Y + VAG VGL LS L+ + GT+ ++
Sbjct: 114 WDATAAMSERMAYWAERNWRIDNEADLDRYTFGVAGAVGLMLSDLWSWFDGTKTNRTHAI 173
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLN 257
G LQ NI+R++ ED S+ VN + ++ ++ +A N
Sbjct: 174 GFGRG--LQAVNIVRNHNEDF---------------SRGVNFMPS-GWDASAIQAYARRN 215
Query: 258 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
++ +A Y +L FC IP +A GTL
Sbjct: 216 LILADA---------YTQSLPKGPALDFCQIPLALAYGTL 246
>gi|261380975|ref|ZP_05985548.1| squalene synthase HpnD [Neisseria subflava NJ9703]
gi|284796004|gb|EFC51351.1| squalene synthase HpnD [Neisseria subflava NJ9703]
Length = 282
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI--LIA 96
+C+ + + SF + L + RNA+ + Y R LD V D + P ++ + +
Sbjct: 6 YCHQKVAESHSSFLSGFRFLSVEKRNAITVLYAFCRELDDVVDSCTDPNVAQITLNWWRS 65
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
V++ E + K + + F F L G Q +E R G
Sbjct: 66 DLEKVFNNEMPEHPVHQALKDIRENFDLPKNEFEALIDGMQMDLE--QARYG-------- 115
Query: 157 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
S D+ YC+ VAG+VG ++++ G +L ++ MGL LQ TNIIRD E
Sbjct: 116 ----SFDELKLYCHRVAGVVGRLIARIL---GFSNLKTLEYADKMGLALQLTNIIRDVGE 168
Query: 217 DINEIPKCRMFWPREIWSKY 236
D + R++ P E K+
Sbjct: 169 DARQ---GRIYLPIEEMQKF 185
>gi|113475697|ref|YP_721758.1| farnesyl-diphosphate farnesyltransferase [Trichodesmium erythraeum
IMS101]
gi|110166745|gb|ABG51285.1| farnesyl-diphosphate farnesyltransferase [Trichodesmium erythraeum
IMS101]
Length = 274
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 120/296 (40%), Gaps = 46/296 (15%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L + SR+F + I QL + L+ AV YL +RA+D +ED + K +L +
Sbjct: 12 ILKETSRTFYIPISQLPSGLKEAVASAYLCMRAIDEIEDHRDLDNFTKAKLLRKISLALQ 71
Query: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRM---GAGMAKFICKEV 159
+ H S K+ ++ H+ +G+ A I R+ A MA +
Sbjct: 72 EAVDHSSFLNFSEKLDLN-ISHLPEVTKRVGEWAILASATIAPRIWGETAAMADRMAYWA 130
Query: 160 E------SIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGL--FLQKTNII 211
E + D D Y + VAG VGL LS L+ G D + + ++G LQ NI+
Sbjct: 131 ENNWTIHTESDLDRYTFSVAGAVGLLLSDLW---GWYDNTQTNRTQAIGFGRGLQAVNIL 187
Query: 212 RDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
R++ ED + + F+P WS +M A ++
Sbjct: 188 RNHSED---LVRGVDFFPYG-WSA---------------------KNMQAYAQRNLLLAD 222
Query: 272 KYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNN 327
Y ++L FC IP +A TL + + G K+ R K+I R NN
Sbjct: 223 SYTNSLPSGPARNFCQIPLTLAHATLDI------LTMGQEKLTRSEVMKLISRCNN 272
>gi|67923757|ref|ZP_00517221.1| Squalene/phytoene synthase [Crocosphaera watsonii WH 8501]
gi|416399366|ref|ZP_11686947.1| hypothetical protein CWATWH0003_3725 [Crocosphaera watsonii WH
0003]
gi|67854384|gb|EAM49679.1| Squalene/phytoene synthase [Crocosphaera watsonii WH 8501]
gi|357262392|gb|EHJ11525.1| hypothetical protein CWATWH0003_3725 [Crocosphaera watsonii WH
0003]
Length = 270
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 50/270 (18%)
Query: 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYD 103
L + SR+F + I +L L++AV YL +RA+D VED + K IL ++
Sbjct: 11 LRETSRTFYIPISRLPGGLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLNL-- 68
Query: 104 REWHFSCGTKEYKVLMDQFHH-VSTAFLELGKGYQDAIEDITKRM---GAGMAKFICKEV 159
+ G +++ + + H + L LG+ A + I R+ A MA +
Sbjct: 69 QAAVEKSGIEDFSAGLVPYSHCLPDVSLRLGQWAVLAPDTIAPRVWDATASMADRMAYWA 128
Query: 160 E------SIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIR 212
E + D+Y + VAG VGL LS L+ + GT+ ++ G LQ NI+R
Sbjct: 129 ENNWTIRTKAHLDQYTFSVAGSVGLLLSDLWAWYDGTQTNRQQAI--GFGRGLQAVNIVR 186
Query: 213 DYLED----INEIPKCRMFWPREIWSKYVNKLEDL-KYEENSDKAVQCLNDMVTNALMHV 267
++ ED +N IP+ W K+ED+ +Y ++ K L D+
Sbjct: 187 NHREDLRRGVNFIPQG---W----------KIEDVHEYARHNLK----LADL-------- 221
Query: 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTL 297
Y +L FC IP +A GTL
Sbjct: 222 -----YTQSLGRGPALDFCKIPLALAHGTL 246
>gi|148358267|ref|YP_001249474.1| squalene and phytoene synthase [Legionella pneumophila str. Corby]
gi|148280040|gb|ABQ54128.1| squalene and phytoene synthase [Legionella pneumophila str. Corby]
Length = 345
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD----- 88
+F Y L VSRSF+ I QL + + V + YL+LR D++ED D +D
Sbjct: 7 SFYYQHLENVSRSFSFCISQLTSPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAAF 66
Query: 89 ----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAI 140
V+ P F + + G K+ +L+++ ++ + Q I
Sbjct: 67 KSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSVI 120
Query: 141 EDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+ I + + GM F+ S+ ++YC++VAGLVG LS +F +
Sbjct: 121 KTILQVVD-GMHYFLNHYHMEGKIVFPSLVTTNQYCFFVAGLVGKLLSHIFTDLLSNFKW 179
Query: 194 PDSLSNS---MGLFLQKTNIIRDYLED 217
SL N G FLQK N+++D ++D
Sbjct: 180 TASLLNQAFHFGFFLQKINLLKDKVDD 206
>gi|448658330|ref|ZP_21682763.1| Squalene/phytoene synthase [Haloarcula californiae ATCC 33799]
gi|445761724|gb|EMA12970.1| Squalene/phytoene synthase [Haloarcula californiae ATCC 33799]
Length = 322
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 102/262 (38%), Gaps = 28/262 (10%)
Query: 62 LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH--------------RHVYDREWH 107
+ + +C+ YL+ R DT+ED I + + +L F R D
Sbjct: 8 MSSQICLGYLLCRVADTIEDAGHISPESQANLLRTFDAALNPASNETMNKFRAAVDGWLP 67
Query: 108 FSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVES----ID 163
S ++ Q + F + Q A+ + + M GM F+ + ++ I+
Sbjct: 68 PSVDRSADWSVVAQSPTIWATFTNQPESVQTAVIPLVREMVDGMTMFVERYADTGGLRIN 127
Query: 164 DYDE---YCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLED 217
D E YCYY AG VG ++ L L ++ GL LQ N+ +D +D
Sbjct: 128 DRSELEQYCYYAAGTVGRLITNLLTRGNVSQKRAQRLYDTADEFGLLLQMVNVSKDVYDD 187
Query: 218 INEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA- 276
E + ++ P E + E + +N + A + + A ++D Y+ A
Sbjct: 188 YTE--ENNVYLPAEWLADEGIDQESILRTDNREPAANVVERTASYAGTFLDDAQAYIKAM 245
Query: 277 -LRDHAIFRFCAIPQIMAIGTL 297
L +IP ++ +GT+
Sbjct: 246 PLTHGNTMAAWSIPYLLGVGTI 267
>gi|397665742|ref|YP_006507279.1| squalene and phytoene synthase [Legionella pneumophila subsp.
pneumophila]
gi|395129153|emb|CCD07378.1| squalene and phytoene synthase [Legionella pneumophila subsp.
pneumophila]
Length = 344
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD----- 88
+F Y L VSRSF+ I QL + + V + YL+LR D++ED D +D
Sbjct: 5 SFYYQHLENVSRSFSFCISQLTSPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAAF 64
Query: 89 ----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAI 140
V+ P F + + G K+ +L+++ ++ + Q I
Sbjct: 65 KSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSVI 118
Query: 141 EDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+ I + + GM F+ S+ ++YC++VAGLVG LS +F +
Sbjct: 119 KTILQVVD-GMHYFLNHYHMEGKIVFPSLVTTNQYCFFVAGLVGKLLSHIFTDLLSNFKW 177
Query: 194 PDSLSNS---MGLFLQKTNIIRDYLED 217
SL N G FLQK N+++D ++D
Sbjct: 178 TASLLNQAFHFGFFLQKINLLKDKVDD 204
>gi|110668758|ref|YP_658569.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
synthase) [Haloquadratum walsbyi DSM 16790]
gi|385804262|ref|YP_005840662.1| geranylgeranyl-diphosphate geranylgeranyltransferase [Haloquadratum
walsbyi C23]
gi|109626505|emb|CAJ52967.1| phytoene synthase [Haloquadratum walsbyi DSM 16790]
gi|339729754|emb|CCC41034.1| phytoene synthase [Haloquadratum walsbyi C23]
Length = 346
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 46 KVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDT-SIPTDVKVPILIAFHRHVYDR 104
+ ++F L + L +R+A + Y R D V D T + P + L R +
Sbjct: 16 RTGKTFHLATRVLPERVRHATYVLYAFFRVADEVVDATDAAPPPQQRERLAELRRQALGK 75
Query: 105 EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDD 164
E + + VL +AF EL + Y+ ED+ + A +A + E+ DD
Sbjct: 76 E------STDDPVL--------SAFAELCESYEIPNEDVNVFIDAMLADVDTDQYETYDD 121
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
+ Y A VG ++ + E P + ++G Q +N +RD ED+ E +
Sbjct: 122 LETYMDGSAAAVGRMMTAIMDTENAETALPH--ATALGEAFQMSNFLRDVGEDVKE--RD 177
Query: 225 RMFWPREIWSKY---VNKLEDLKYEENSDKAVQ 254
R++ P+E +Y ++ +L+++EN +Q
Sbjct: 178 RVYLPQETLRQYDVSTAQILNLEFDENVRAVIQ 210
>gi|422303538|ref|ZP_16390889.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9806]
gi|389791498|emb|CCI12708.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9806]
Length = 269
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
E +F+ G ++L + + L + D T M MA +
Sbjct: 69 QAGTENSTEENFTFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + D+Y + VAG VGL LS L+ + GTE S + G LQ NI R+
Sbjct: 129 NNWDIRTEVQLDQYTFSVAGAVGLLLSDLWNWYDGTE--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDRR---RGVSFLPQG-WT---------------------MSDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPKGPALDFCKIPLALAHGTL 245
>gi|397662664|ref|YP_006504202.1| squalene and phytoene synthase [Legionella pneumophila subsp.
pneumophila]
gi|395126075|emb|CCD04253.1| squalene and phytoene synthase [Legionella pneumophila subsp.
pneumophila]
Length = 345
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD----- 88
+F Y L VSRSF+ I QL + + V + YL+LR D++ED D +D
Sbjct: 7 SFYYQHLENVSRSFSFCISQLTSPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAAF 66
Query: 89 ----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAI 140
V+ P F + + G K+ +L+++ ++ + Q I
Sbjct: 67 KSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSVI 120
Query: 141 EDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+ I + + GM F+ S+ ++YC++VAGLVG LS +F +
Sbjct: 121 KTILQVVD-GMHYFLNHYHMEGKIVFPSLVTTNQYCFFVAGLVGKLLSHIFTDLLSNFKW 179
Query: 194 PDSLSNS---MGLFLQKTNIIRDYLED 217
SL N G FLQK N+++D ++D
Sbjct: 180 TASLLNQAFHFGFFLQKINLLKDKVDD 206
>gi|425445070|ref|ZP_18825109.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9443]
gi|389735024|emb|CCI01411.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9443]
Length = 269
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ F+ G ++L + + L + D T M MA +
Sbjct: 69 QAGTENSTKEDFTFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GTE S + G LQ NI R+
Sbjct: 129 NNWDIRTEIELDQYTFSVAGAVGLLLSDLWNWYDGTE--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED + F PR W+ ++D+ A +++ Y
Sbjct: 187 HGEDRR---RGVSFLPRG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPKGPALDFCKIPLALAHGTL 245
>gi|421743479|ref|ZP_16181542.1| farnesyl-diphosphate farnesyltransferase [Streptomyces sp. SM8]
gi|406688125|gb|EKC92083.1| farnesyl-diphosphate farnesyltransferase [Streptomyces sp. SM8]
Length = 318
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ +R+FA I+ L R A+ Y R +D + D T P +VK L A
Sbjct: 19 YSYCETVTGSEARNFAYGIRLLPVAERRAMSALYAFSRRVDDIGDGTLAP-EVKADRLGA 77
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + DR ++ KV D V+ A + + + + + + + +
Sbjct: 78 -TRDILDR-------IRDGKVDEDDTDPVAVALADAARRFPIPLGGLDELIDGVLMDVKG 129
Query: 157 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS-----LSNSMGLFLQKTNII 211
E+ DD YC VAG +G LS + AP + ++++GL LQ TNI+
Sbjct: 130 VTYETWDDLKLYCRCVAGAIGR-LSLGIFGPAPAPGAPQTEKAAEYADTLGLALQLTNIL 188
Query: 212 RDYLEDINEIPKCRMFWPREIWSKY 236
RD ED R + P + +K+
Sbjct: 189 RDVREDAG---NGRTYLPADDLAKF 210
>gi|239635830|ref|ZP_04676854.1| dehydrosqualene synthase [Staphylococcus warneri L37603]
gi|239598608|gb|EEQ81081.1| dehydrosqualene synthase [Staphylococcus warneri L37603]
Length = 287
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTD---VKVPI 93
+ +C+ ++ K S+SF+ L R AV Y V R +D D+ P +K I
Sbjct: 8 YKYCHQIMKKYSKSFSYAFDLLPESERRAVWAVYAVCRIIDDSIDEEQNPQKLQAIKEDI 67
Query: 94 LIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
+ + V D F + +M F+ S + + + + IE + + M
Sbjct: 68 QLIQSQQV-DSPDQFKSNQR----IMLAFYDTSQNYKMEYQSFYNLIESVFEDEHFEM-- 120
Query: 154 FICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
K+ E + YCY VAG VG LS + +++ ++ +G LQ TNI+RD
Sbjct: 121 -FVKDEELM----RYCYGVAGTVGEVLSPILTEQPSDETY--EVARELGEALQLTNILRD 173
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
ED K R+++ +E+ ++Y +ED+ + +D +
Sbjct: 174 VGEDFE---KGRIYFSQEMLNQYDVNIEDVYQHQPTDNYI 210
>gi|390440277|ref|ZP_10228621.1| Squalene/phytoene synthase [Microcystis sp. T1-4]
gi|389836333|emb|CCI32747.1| Squalene/phytoene synthase [Microcystis sp. T1-4]
Length = 269
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKSQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
E +F+ G ++L + + + I D T M MA +
Sbjct: 69 QAGTENSTEENFAFGLVHREILPEVTLRIGEWAMLAPDSIAPRIWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GTE S + G LQ NI R+
Sbjct: 129 NNWDIRTEVELDQYTFSVAGAVGLLLSDLWNWYDGTE--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLED 217
+ ED
Sbjct: 187 HGED 190
>gi|171321230|ref|ZP_02910198.1| Squalene/phytoene synthase [Burkholderia ambifaria MEX-5]
gi|171093492|gb|EDT38666.1| Squalene/phytoene synthase [Burkholderia ambifaria MEX-5]
Length = 354
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 35/287 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVY 102
+L VSRSF L ++ L +R V + YL+ RA DT+ D + + + +L R
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRAALLTDL-RDEI 72
Query: 103 DREWHFSCGTKEY----KVLMDQFHHVSTA----FLELGKGYQDA----IEDITKRMGAG 150
+R + ++ ++ D HV A L L + DA I + + +G
Sbjct: 73 ERLGDGAALSRALEDVTRMQTDSHEHVLLASMKPMLALLRAQPDADRASIRKVVATLTSG 132
Query: 151 MAKFICK-----------EVESIDDYDEYCYYVAGLVG-----LGLSKLFYASGTEDLAP 194
M +F + + S D+ D Y Y VAG VG + + A G +
Sbjct: 133 M-EFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHTRAARGWDFADM 191
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
G LQ TNI+RD +D+ I +C + P ++ +++ + DL S +A
Sbjct: 192 REKGIRFGKALQMTNILRDCAKDLR-IGRC--YLPDDVLAEHRIGVADLMSPNASARARG 248
Query: 255 CLNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLAL 299
L +++ L D Y A+ R R C P ++ + TL L
Sbjct: 249 VLVELLRATLAQYRDACLYTQAIPRRFVRLRLACLWPIMIGLETLEL 295
>gi|381406462|ref|ZP_09931145.1| Phytoene synthase [Pantoea sp. Sc1]
gi|380735764|gb|EIB96828.1| Phytoene synthase [Pantoea sp. Sc1]
Length = 309
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P ++ + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSRLSAEQRLAQLE-- 75
Query: 108 FSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESIDDYD 166
T++ + AF E+ + D + D AG A + + +++DD
Sbjct: 76 --TKTRQAYAGLQMHEPAFAAFQEVAMAH-DILPDYAFAHLAGFAMDVRETRYQTLDDTL 132
Query: 167 EYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED
Sbjct: 133 RYCYHVAGVVGLMMAQIM---GVRDRATLDRACDLGLAFQLTNIARDIVEDAT 182
>gi|237746070|ref|ZP_04576550.1| phytoene synthase [Oxalobacter formigenes HOxBLS]
gi|229377421|gb|EEO27512.1| phytoene synthase [Oxalobacter formigenes HOxBLS]
Length = 278
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 63 RNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEY---KVLM 119
R A+ Y R +D + DD S+ T+ L + R + D G ++ + LM
Sbjct: 30 RKAITALYAFCREVDDIVDDRSLDTESARRKLAGWRREIAD----MYAGHPDHLITQALM 85
Query: 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLG 179
S +LG D +E R K S + ++YC++VAG+VG+
Sbjct: 86 PHLQAFSIEESQLG-AIVDGMEMDLDR----------KRYASFGELEKYCWHVAGVVGIL 134
Query: 180 LSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNK 239
+K+F + + L + +GL Q TNIIRD EDI R++ P++ ++
Sbjct: 135 AAKIFGVTQADTL---EYAEKLGLAFQLTNIIRDVGEDIG---MGRIYLPQDELERFGVT 188
Query: 240 LEDL 243
+DL
Sbjct: 189 EDDL 192
>gi|383648212|ref|ZP_09958618.1| probable phytoene synthase [Streptomyces chartreusis NRRL 12338]
Length = 316
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Query: 29 KQIPPEPH--------WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVE 80
+ + EPH +++C ++ + +R+FA I+ L T R A+ Y R +D +
Sbjct: 3 RTVESEPHASPPVLAAYSYCEAVTGRQARNFAYGIRLLPTPQRRAMSALYAFSRRVDDI- 61
Query: 81 DDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
D ++ DVKV L R + R +E +V D V+ A + +
Sbjct: 62 GDGALADDVKVARL-EETRSLLTR-------IREGEVAEDDIDPVAVALTHAAGHFPIPL 113
Query: 141 EDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDL--APDSL 197
+ + + + + E+ DD YC VAG +G L L G + AP+
Sbjct: 114 GGLDELIDGVLMDVRGETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARGVERAPE-Y 172
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED R + P + +K+
Sbjct: 173 ADTLGLALQLTNILRDVREDAV---GGRTYLPADDLAKF 208
>gi|52840366|ref|YP_094165.1| squalene and phytoene synthases [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776069|ref|YP_005184498.1| squalene and phytoene synthase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627477|gb|AAU26218.1| squalene and phytoene synthases [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364506875|gb|AEW50399.1| squalene and phytoene synthase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 346
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 34/207 (16%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD----- 88
+F Y L VSRSF+ I QL + V + YL+LR D++ED D +D
Sbjct: 8 SFYYQHLENVSRSFSFCISQLTYPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAAF 67
Query: 89 ----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAI 140
V+ P F + + G K+ +L+++ ++ + Q I
Sbjct: 68 KSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSVI 121
Query: 141 EDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+ I + + GM F+ S+ ++YC++VAGLVG LS +F +
Sbjct: 122 KTILQVVD-GMHYFLNHYHMEGKIVFPSLVTTNQYCFFVAGLVGKLLSHIFTDLLSNFKW 180
Query: 194 PDSLSNS---MGLFLQKTNIIRDYLED 217
SL N G FLQK N+++D ++D
Sbjct: 181 TASLLNQAFHFGFFLQKINLLKDRVDD 207
>gi|54296105|ref|YP_122474.1| hypothetical protein lpp0124 [Legionella pneumophila str. Paris]
gi|53749890|emb|CAH11272.1| hypothetical protein lpp0124 [Legionella pneumophila str. Paris]
Length = 345
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 38 AFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVED----DTSIPTD----- 88
+F Y L VSRSF+ I QL + + V + YL+LR D++ED D +D
Sbjct: 7 SFYYQHLENVSRSFSFCISQLTSPAKEWVALSYLLLRVADSIEDAKWQDLQTQSDSFAAF 66
Query: 89 ----VKVPILIAFHRHVYDREWHFSCGTKEY----KVLMDQFHHVSTAFLELGKGYQDAI 140
V+ P F + + G K+ +L+++ ++ + Q I
Sbjct: 67 KSFLVQTPANDQFTKWLSSFPSQLPLGEKQLLCAVPLLLEEKDNLPESI------KQSVI 120
Query: 141 EDITKRMGAGMAKFICKE-------VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
+ I + + GM F+ S+ ++YC++VAGLVG LS +F +
Sbjct: 121 KTILQVVD-GMHYFLNHYHMEGKIVFPSLVTTNQYCFFVAGLVGKLLSHIFTDLLSNFKW 179
Query: 194 PDSLSNS---MGLFLQKTNIIRDYLED 217
+L N G FLQK N+++D ++D
Sbjct: 180 TATLLNQAFHFGFFLQKINLLKDKVDD 206
>gi|430745939|ref|YP_007205068.1| phytoene/squalene synthetase [Singulisphaera acidiphila DSM 18658]
gi|430017659|gb|AGA29373.1| phytoene/squalene synthetase [Singulisphaera acidiphila DSM 18658]
Length = 300
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ FC S+ K +++F L LR ++C Y LR D + D+ + P + L A
Sbjct: 9 YRFCGSLSRKEAKNFYYSFLVLPAPLRRSMCALYAFLRHTDDLADEPA-PAVEQRARLDA 67
Query: 97 FHRHVYDREWHFSCGTKE----YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
+ + V + + G+ L+D S + + Y D + D G M
Sbjct: 68 WRQSV---DQALTGGSAACWPGLPALVDTVERHS-----IPRRYLDEVID-----GVAMD 114
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
C + +D YCY VA +VGL ++ E A + L+ + GL LQ TNI+R
Sbjct: 115 LDPCP-FATFEDLYGYCYRVASVVGLSCIHIWGYRSDEGRA-EELAEACGLALQLTNILR 172
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK 251
D ED + R++ P+E ++ EDL + +D+
Sbjct: 173 DVREDAM---RGRIYLPQEDLDRFGVLPEDLVADRTNDR 208
>gi|241759964|ref|ZP_04758063.1| squalene synthase HpnD [Neisseria flavescens SK114]
gi|241319650|gb|EER56070.1| squalene synthase HpnD [Neisseria flavescens SK114]
Length = 282
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 30/204 (14%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ + SF + L + RNA+ + Y R LD V D + P + I +
Sbjct: 6 YCHQKAAESHSSFLSGFRFLSLEKRNAITVLYAFCRELDDVVDGCTDPNVAR----ITLN 61
Query: 99 RHVYDREWHFSCGTKEYKV------LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
D E F+ E+ V + F F L G Q +E R G
Sbjct: 62 WWRSDLEKVFNNEMPEHPVHQALKDIRSNFDLPKNEFEALIDGMQMDLE--QARYGG--- 116
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
D+ YCY VAG+VG ++++ S + L ++ MGL LQ TNIIR
Sbjct: 117 ---------FDELKLYCYRVAGVVGCLIARILGFSNPKTL---EYADKMGLALQLTNIIR 164
Query: 213 DYLEDINEIPKCRMFWPREIWSKY 236
D ED + R++ P E K+
Sbjct: 165 DVGEDARQ---GRIYLPIEEMQKF 185
>gi|269213616|ref|ZP_05982387.2| squalene synthase HpnD [Neisseria cinerea ATCC 14685]
gi|269146115|gb|EEZ72533.1| squalene synthase HpnD [Neisseria cinerea ATCC 14685]
Length = 313
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 18/193 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+A+ + Y R LD + DD S P + + +
Sbjct: 37 YCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDIADDCSDPNVAQA--TLNWW 94
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
R DR + CG M H V+ A ++ + + ++ + +
Sbjct: 95 RGDLDRVF---CG-------MMPEHPVNQALRQIKETFDLPKYELEALIDGMQMDLVQAR 144
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 145 YGSFEELKLYCHRVAGVVGCLIARILGFSDNQTL---EYADKMGLALQLTNIIRDVGEDA 201
Query: 219 NEIPKCRMFWPRE 231
R++ P E
Sbjct: 202 R---NGRIYLPME 211
>gi|403745757|ref|ZP_10954505.1| Phytoene synthase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121101|gb|EJY55425.1| Phytoene synthase [Alicyclobacillus hesperidum URH17-3-68]
Length = 286
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
++++ + ++YC YVAG VG+ +F G D SL+ MG LQ TNI+RD EDI
Sbjct: 118 LQTMAELEQYCDYVAGTVGIMCVHIF---GYRDPKALSLARDMGRALQLTNILRDLGEDI 174
Query: 219 NEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268
+ R++ P E +++ +EDL+ + + + + + A M+ E
Sbjct: 175 E---RDRVYLPSEELARHGYTIEDLRLKRLTPGFLALMREQAERAEMYYE 221
>gi|166366096|ref|YP_001658369.1| squalene/phytoene synthase [Microcystis aeruginosa NIES-843]
gi|425466637|ref|ZP_18845935.1| Squalene/phytoene synthase [Microcystis aeruginosa PCC 9809]
gi|166088469|dbj|BAG03177.1| squalene/phytoene synthase [Microcystis aeruginosa NIES-843]
gi|389830769|emb|CCI26984.1| Squalene/phytoene synthase [Microcystis aeruginosa PCC 9809]
Length = 269
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKSQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ F+ G ++L + + L + D T M MA +
Sbjct: 69 QAGTENSTKEDFAFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEIELDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L + FC IP +A GTL
Sbjct: 222 TQSLPNGPALDFCKIPLALAHGTL 245
>gi|148398|gb|AAA21264.1| prephytoene pyrophosphate synthase [Pantoea agglomerans]
Length = 296
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD ++ P L + + E
Sbjct: 5 SKSFATASKLFDAKTRRSVLMLYSWCRHCDDVIDDQTLGFQTDQPSLQTPEQRLMQLEMK 64
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQ-DAIEDITKRMGAGMAKFICKEVESID 163
G++ ++ F V+ A ++ Y D +E M A++I +D
Sbjct: 65 TRQAYAGSQMHEPAFAAFQEVAMAH-DIAPAYAFDHLEGFA--MDVREAEYI-----QLD 116
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED + + +
Sbjct: 117 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDAH-VGR 172
Query: 224 C 224
C
Sbjct: 173 C 173
>gi|314934615|ref|ZP_07841974.1| dehydrosqualene synthase [Staphylococcus caprae C87]
gi|313652545|gb|EFS16308.1| dehydrosqualene synthase [Staphylococcus caprae C87]
Length = 287
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 35/285 (12%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E ++ +C+ ++ + S+SF+ L + R AV Y V R + D SI I
Sbjct: 5 EKNFKYCHQIMKEHSKSFSYAFDYLPENERKAVWAIYAVCRII-----DDSIDVHENPQI 59
Query: 94 LIAFHRHVYDREWHFSCGTKEYK---VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
L H + E + E+K ++M+ + VS F + + + I+ + +
Sbjct: 60 LKNIHDDIITIEKNHDVENYEFKSNQMIMEALYTVSQNFTIEYQSFYNLIQTVYEDQDFE 119
Query: 151 MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
M E+ D+ YCY VAG VG L+ + E+ ++ +G LQ TNI
Sbjct: 120 M-------FETDDELLNYCYGVAGTVGEVLTPVLAEQPNEETY--RIARKLGEALQITNI 170
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+RD ED R+++ + S++ +E+ + N+ + Q ++ +A + ED
Sbjct: 171 LRDVGED---FENDRIYFSKSSLSRFDVSIEN---DFNNGVSQQYIDLWEHHAKLAQED- 223
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRR 315
Y AL + +F A P I+ + ++ ++RG++ R
Sbjct: 224 --YDIALSNLGVFNKEAQP-IIELASI--------IYRGILDEVR 257
>gi|297190553|ref|ZP_06907951.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
gi|197717867|gb|EDY61775.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
Length = 313
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 26 QAEKQIPPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDD 82
+ Q+P P +++C ++ + +R+FA I+ L R A+ Y R +D + D
Sbjct: 2 EGPTQVPTAPVQAAYSYCEAVTGQQARNFAYGIRLLPPHKRQAMSALYAFSRRVDDIGDG 61
Query: 83 TSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
T P K L A R + DR ++ V D V+ A + + + +
Sbjct: 62 TLKPQ-AKQDRLEA-TRELLDR-------IRQGAVDEDDTDPVAVALCDAARRFPLPLGG 112
Query: 143 ITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSN 199
+ + + + + E+ DD YC VAG +G LG+ + D A + ++
Sbjct: 113 LDELIDGVLMDVRGETYETWDDLKAYCRCVAGAIGRLSLGVFGTQPGARGADRAAE-YAD 171
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++GL LQ TNI+RD ED + R + P + +K+
Sbjct: 172 TLGLALQLTNILRDIAEDAS---NGRTYLPADDLAKF 205
>gi|374985346|ref|YP_004960841.1| phytoene synthase [Streptomyces bingchenggensis BCW-1]
gi|297155998|gb|ADI05710.1| probable phytoene synthase [Streptomyces bingchenggensis BCW-1]
Length = 306
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ + +R+FA I+ L T+ R A+ Y R +D + D + D K L A
Sbjct: 5 YRYCEAVTGQQARNFAYGIRLLPTEKRRAMSALYAFSRRVDDI-GDGRLDADAKRARL-A 62
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R V DR ++ + D V+ A + + + + + + +
Sbjct: 63 DTRAVLDR-------IRDRGIEEDDTDPVAVALAHAARRFPIPLGGLDELIDGVLMDVSG 115
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTE----DLAPDSLSNSMGLFLQKTN 209
+ E+ DD YC VAG +G LG+ A G + AP+ ++++GL LQ TN
Sbjct: 116 QTYETWDDLRAYCRCVAGAIGRLSLGVFGTVRAPGMSAREIERAPE-YADTLGLALQLTN 174
Query: 210 IIRDYLEDINEIPKCRMFWPREIWSKY 236
I+RD ED + R + P + +K+
Sbjct: 175 ILRDIREDAS---GGRTYLPADDLAKF 198
>gi|18143449|dbj|BAB79604.1| crtB [Pantoea agglomerans pv. milletiae]
Length = 296
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + G R +V + Y R D V DD + P L + + + E
Sbjct: 5 SKSFATASKLFGAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEMK 64
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A D + AG A + + +++D
Sbjct: 65 TRQAYAGSQMHEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVHETRYQTLD 116
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED +
Sbjct: 117 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDAD 169
>gi|425439169|ref|ZP_18819500.1| Squalene/phytoene synthase [Microcystis aeruginosa PCC 9717]
gi|389714930|emb|CCI00558.1| Squalene/phytoene synthase [Microcystis aeruginosa PCC 9717]
Length = 269
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ F+ G ++L + + L + D T M MA +
Sbjct: 69 QAGTENSTKEDFTFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEIELDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPKGPALDFCKIPLALAHGTL 245
>gi|441148919|ref|ZP_20965054.1| phytoene synthase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440619705|gb|ELQ82747.1| phytoene synthase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 321
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 27 AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP 86
A P + +C ++ + +R+FA I+ L TD R A+ Y R +D + D +
Sbjct: 5 AHASAPVLAAYRYCEAVTGQQARNFAYGIRLLPTDKRQAMSALYAFSRRVDDI-GDGPLA 63
Query: 87 TDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKR 146
D K R + D + ++ V D V+ A + + + + + +
Sbjct: 64 NDAK-------ERRLEDTRALLAR-IQDGAVDEDDTDPVAVALADASRRFPIPLGGLDEL 115
Query: 147 MGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL-----SNSM 201
+ + + E+ DD YC VAG +G +F GT APD+ ++++
Sbjct: 116 IDGVLMDVRGETYETWDDLKVYCRCVAGAIGRLSLGVF---GTVPGAPDTARAAEYADTL 172
Query: 202 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
GL LQ TNI+RD ED R + P + +K+
Sbjct: 173 GLALQLTNILRDVREDAG---NGRTYLPSDDLAKF 204
>gi|291360377|gb|ADD97675.1| phytoene synthase [Pantoea agglomerans]
Length = 295
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 13/179 (7%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 5 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLE-- 62
Query: 108 FSCGTKEYKVLMDQFHHVS-TAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESIDDY 165
K + + Q H + AF E+ + D + AG A + + +++DD
Sbjct: 63 ----MKTRQPMRIQMHEPAFAAFQEVAMAH-DILPAYAFDHLAGFAMDVHETRYQTLDDT 117
Query: 166 DEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +C
Sbjct: 118 LRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGRC 172
>gi|425453439|ref|ZP_18833197.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9807]
gi|389804097|emb|CCI17033.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9807]
Length = 269
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV 101
++L + SR+F + I +L L AV YL +RA+D VED + K IL ++
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 102 Y-----DREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ F+ G ++L + + L + D T M MA +
Sbjct: 69 QAGTQNSTKEDFTFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAS 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + D+Y + VAG VGL LS L+ + GTE S + G LQ NI R+
Sbjct: 129 NNWDIRTEVQLDQYTFSVAGAVGLLLSDLWNWYDGTE--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDRR---RGVSFLPQG-WT---------------------MSDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPQGPALDFCKIPLALAHGTL 245
>gi|282897465|ref|ZP_06305467.1| Squalene/phytoene synthase [Raphidiopsis brookii D9]
gi|281198117|gb|EFA73011.1| Squalene/phytoene synthase [Raphidiopsis brookii D9]
Length = 215
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L + SR+F + I + + L+ AV YL +RA+D +ED ++ K +L + + +
Sbjct: 10 ILKETSRTFYIPISIMPSGLQEAVASAYLCMRAIDEIEDHATLENHTKGILLQSISQTLQ 69
Query: 102 -------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELG----KGYQDAIEDITKRMGAG 150
D FS G K Y+ D VS E + I D T M
Sbjct: 70 AGVDGFAVD---AFSIGFKGYE---DSLPEVSLRIREWAILAPESIAPRIWDATAAMADR 123
Query: 151 MAKF--ICKEVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQK 207
MA + I ++ + D D Y + VAG VGL LS L+ + GT ++++ G LQ
Sbjct: 124 MAYWSQINWKITNEYDLDRYTFGVAGAVGLLLSDLWSWYDGTTTNRMEAIAFGRG--LQA 181
Query: 208 TNIIRDYLEDIN 219
NI+R+ ED+
Sbjct: 182 VNILRNNSEDLT 193
>gi|421473858|ref|ZP_15921935.1| squalene/phytoene synthase [Burkholderia multivorans CF2]
gi|400233368|gb|EJO62921.1| squalene/phytoene synthase [Burkholderia multivorans CF2]
Length = 351
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHV- 101
+L VSRSF L ++ L +R V + YL+ RA DT+ D + + + +L A +
Sbjct: 14 LLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEIE 73
Query: 102 -----------YDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
D + E+ VL+ + + + +I + + +G
Sbjct: 74 RLGDGVALSAALDDVTQMQTDSHEH-VLLGSMQPMLALLRAQPEADRTSIRKVVATLTSG 132
Query: 151 MAKFICKE-----------VESIDDYDEYCYYVAGLVG-----LGLSKLFYASGTEDLAP 194
M +F + + + D D Y Y VAG VG + A G + A
Sbjct: 133 M-EFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHTRAARGWDVPAM 191
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQ 254
G LQ TNI+RD +D+ I +C + P ++ + + + DL E +A
Sbjct: 192 RERGIRFGKALQMTNILRDCAKDLR-IGRC--YLPEDVLAAHGLRAADLLAAEAYPRARG 248
Query: 255 CLNDMVTNALMHVEDCLKYMSAL-RDHAIFRF-CAIPQIMAIGTLAL 299
L D++ AL D Y A+ R R C P ++ + TL L
Sbjct: 249 VLFDLLRVALDQYRDACAYTVAIPRRFVRLRLACLWPILIGLETLEL 295
>gi|425434965|ref|ZP_18815428.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9432]
gi|389675398|emb|CCH95498.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9432]
Length = 269
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHR 99
++L + SR+F + I +L L AV YL +RA+D VED + K IL I+ +
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 100 HVYDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ + F+ G ++L + + + + D T M MA +
Sbjct: 69 QAGTQNSTKEDFTFGLVHREILPEVTLRIGEWAMLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEIELDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPQGPALDFCKIPLALAHGTL 245
>gi|239992109|ref|ZP_04712773.1| putative squalene/phytoene synthase [Streptomyces roseosporus NRRL
11379]
Length = 317
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 24 SRQAEKQI----PP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDT 78
SR E Q PP + +++C ++ + +R+FA I+ L + R A+ Y R +D
Sbjct: 2 SRTVEGQTTYMSPPVQAAYSYCEAVTGQQARNFAYGIRLLPNEKRQAMSALYAFSRRVDD 61
Query: 79 VEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQD 138
+ D + K L + R + DR H KV D V+ A + + +
Sbjct: 62 I-GDGELDAGTKRTRLES-TRELLDRVRHG-------KVEEDDTDPVAVALADAARRFPL 112
Query: 139 AIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG---LGL-SKLFYASGTEDLAP 194
+ + + + + E+ DD YC VAG +G LG+ A G E A
Sbjct: 113 PLGGLDELIDGVLMDVRGATYETWDDLKTYCRCVAGAIGRLSLGVFGTAPGARGAERAA- 171
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED R + P + +K+
Sbjct: 172 -EYADTLGLALQLTNILRDVREDAG---NGRTYLPADDLAKF 209
>gi|359415720|ref|ZP_09208130.1| Squalene/phytoene synthase, partial [Candidatus Haloredivivus sp.
G17]
gi|358033921|gb|EHK02416.1| Squalene/phytoene synthase [Candidatus Haloredivivus sp. G17]
Length = 200
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSN---SMGLFLQKTNIIRDY 214
+ ++++ YC++VAG VG L+ +F Y + + ++LSN S G FLQ NI++D
Sbjct: 9 INDMEEFHHYCHFVAGTVGEMLTDIFSYHNDISESVSENLSNYSESFGQFLQTINILKDP 68
Query: 215 LEDINEIPKCRMFWPREIW-SKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
LED + +F P E+ + + + +L+ + D ++ + ++ A +D Y
Sbjct: 69 LEDFE--SESAVFIPEEVLPGTHDDIIRELEI-RDPDTIIEGMKSLLEYADRQGDDARNY 125
Query: 274 MSALRDHAIFR-FCAIPQIMAIGTLALCYNNIE-VFRGVVKMRRGLTAKVIDRTNN 327
+ + +++ R + +P ++A T N E V +G + + R ++ N
Sbjct: 126 IELIPENSEIRGYLEVPYLLARATAREIEENPEKVAQGDLAVEREEVMAILQEAGN 181
>gi|290955845|ref|YP_003487027.1| squalene/phytoene synthase [Streptomyces scabiei 87.22]
gi|260645371|emb|CBG68457.1| putative squalene/phytoene synthase [Streptomyces scabiei 87.22]
Length = 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 29 KQIPPEPH--------WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVE 80
+ + EPH +++C ++ + +R+FA I+ L T R A+ Y R +D +
Sbjct: 3 RTVETEPHTSAPVLAAYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDI- 61
Query: 81 DDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAF-LELGKGYQDA 139
D ++ +VK L R + R S + + H +AF + L DA
Sbjct: 62 GDGALAVEVKTARL-EESRTLLTRVRGGSVDEDDTDPVAVALTHAQSAFPIPL-----DA 115
Query: 140 IEDITKRMGAGMAKFICKE-VESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPD 195
++++ G+ K + E E+ DD YC VAG +G LG+ + + AP+
Sbjct: 116 LDELID----GVLKDVRGEYYETWDDLKVYCRCVAGSIGRLSLGVFGTEPGARGSERAPE 171
Query: 196 SLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED R + P + +K+
Sbjct: 172 -YADTLGLALQLTNILRDVREDAE---GGRTYLPTDDLAKF 208
>gi|411001985|ref|ZP_11378314.1| phytoene synthase [Streptomyces globisporus C-1027]
Length = 317
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 24 SRQAEKQI----PP-EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDT 78
SR E Q PP + +++C ++ + +R+FA I+ L + R A+ Y R +D
Sbjct: 2 SRTVEGQTTYMSPPVQAAYSYCEAVTGQQARNFAYGIRLLPNEKRQAMSALYAFSRRVDD 61
Query: 79 VEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQD 138
+ D + K L + R + DR H KV D V+ A + + +
Sbjct: 62 I-GDGELDAGTKRTRLES-TRELLDRVRHG-------KVEEDDTDPVAVALADAARRFPL 112
Query: 139 AIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVG---LGL-SKLFYASGTEDLAP 194
+ + + + + E+ DD YC VAG +G LG+ A G E A
Sbjct: 113 PLGGLDELIDGVLMDVRGATYETWDDLKTYCRCVAGAIGRLSLGVFGTAPGARGAERAA- 171
Query: 195 DSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED R + P + +K+
Sbjct: 172 -EYADTLGLALQLTNILRDVREDAG---NGRTYLPADDLAKF 209
>gi|448541320|ref|ZP_21624151.1| farnesyl-diphosphate farnesyltransferase, partial [Haloferax sp.
ATCC BAA-646]
gi|445708482|gb|ELZ60322.1| farnesyl-diphosphate farnesyltransferase, partial [Haloferax sp.
ATCC BAA-646]
Length = 182
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDPDDDTTVDEFVTAVQPHLPAEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVRPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLED 217
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDD 180
>gi|386018481|ref|YP_005941087.1| phytoene synthase CrtB [Pantoea ananatis AJ13355]
gi|327396568|dbj|BAK13989.1| phytoene synthase CrtB [Pantoea ananatis AJ13355]
Length = 296
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD ++ + P L + + E
Sbjct: 5 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRLMQLEMK 64
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQ-DAIEDITKRMGAGMAKFICKEVESID 163
G++ ++ F V+ A ++ Y D +E M A++ +D
Sbjct: 65 TRQAYAGSQMHEPAFAAFQEVAMAH-DIAPAYAFDHLEGFA--MDVREAQY-----SQLD 116
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD ++D +
Sbjct: 117 DTLRYCYHVAGVVGLMMAQIM---GVRDKATLDRACDLGLAFQLTNIARDIVDDAH 169
>gi|418204322|gb|AFX61742.1| phytoene synthase [Pantoea agglomerans]
Length = 296
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 5 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEMK 64
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ Y+ F V+ A D + AG A + + +++D
Sbjct: 65 TRQAYAGSQMYEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVHETRYQTLD 116
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 117 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGR 172
Query: 224 C 224
C
Sbjct: 173 C 173
>gi|225077443|ref|ZP_03720642.1| hypothetical protein NEIFLAOT_02505 [Neisseria flavescens
NRL30031/H210]
gi|224951261|gb|EEG32470.1| hypothetical protein NEIFLAOT_02505 [Neisseria flavescens
NRL30031/H210]
Length = 282
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C+ + SF + L + RNA+ + Y R LD V D + P + I +
Sbjct: 6 YCHQKAAESHSSFLSGFRFLSVEKRNAITVLYAFCRELDDVVDGCTDPNVAQ----ITLN 61
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
D E F+ E+ V Q A +L K +A+ D +M A++
Sbjct: 62 WWRSDLEKVFNNEMPEHPV--HQALKDIRANFDLPKNEFEALID-GMQMDLEQARY---- 114
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S D+ YC+ VAG+VG ++++ + + L ++ MGL LQ TNIIRD ED
Sbjct: 115 -GSFDELKLYCHRVAGVVGCLIARILGFTNPKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E K+
Sbjct: 171 RQ---GRIYLPIEEMQKF 185
>gi|349609735|ref|ZP_08889112.1| squalene synthase HpnD [Neisseria sp. GT4A_CT1]
gi|348611303|gb|EGY60964.1| squalene synthase HpnD [Neisseria sp. GT4A_CT1]
Length = 282
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+A+ + Y R LD V DD S P + +
Sbjct: 6 YCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATL----- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + +M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGMMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILVFSDDRTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMQRF 185
>gi|205372899|ref|ZP_03225707.1| phytoene synthase [Bacillus coahuilensis m4-4]
Length = 278
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 27/236 (11%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C ++ S++F L D + AV Y R +D + D+ P V L AF
Sbjct: 11 CEEVIKFHSKTFYRAFSLLPKDQKKAVWAVYAFCRIVDDIVDEHEDP----VTDLYAFEE 66
Query: 100 HV-YDREWHFSCGTKEYKVLMDQFHHVS---TAFLELGKGYQDAIEDITKRMGAGMAKFI 155
E F + L D F+ + AF ++ KG + DI R+
Sbjct: 67 EFRLFLEGRFQDDNSMWVALSDVFNRFNMDVQAFWDMIKGQR---MDINSRV-------- 115
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
E+ +D +Y Y+VA VGL L + + L ++ +G +Q TNI+RD
Sbjct: 116 ---YETTNDVLDYSYHVASTVGLMLLPILAPGKEKTLREGAIH--LGYAMQMTNILRDVG 170
Query: 216 EDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCL 271
ED+ + R++ PR++++KY +L+ +D V D+ A ++ E L
Sbjct: 171 EDLE---RNRIYLPRDLFTKYHYTQAELESLIKNDAFVAIWEDLARKAELYYESAL 223
>gi|448292131|ref|ZP_21482805.1| farnesyl-diphosphate farnesyltransferase [Haloferax volcanii DS2]
gi|445573650|gb|ELY28171.1| farnesyl-diphosphate farnesyltransferase [Haloferax volcanii DS2]
Length = 330
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 66 VCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRH------------VYDREWHFSCGTK 113
+CI YL+ R DTVED +SI D + +L + R V + H +
Sbjct: 5 ICIGYLLCRIADTVEDSSSIAPDEQAHLLRLYDRALDSDDDTTVDEFVAAVQPHLPPEGE 64
Query: 114 EYK--VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDD 164
+ +++ V F L + ++A+ + + +GMA F+ + ++S ++
Sbjct: 65 QSDDWMVVANTARVFRTFEALPEDVREAVTPPVRELVSGMAMFVERYSQTGGLRIQSREE 124
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL---SNSMGLFLQKTNIIRDYLED 217
+EYCYY AG VG ++ L + L + GL LQ NI +D +D
Sbjct: 125 LEEYCYYAAGTVGNLITNLVTRGNVDSERRSRLYDTAEEFGLLLQLVNIAKDVHDD 180
>gi|298245566|ref|ZP_06969372.1| Phytoene synthase [Ktedonobacter racemifer DSM 44963]
gi|297553047|gb|EFH86912.1| Phytoene synthase [Ktedonobacter racemifer DSM 44963]
Length = 311
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C + + S++F L R A+ Y R +D + D+ + + P
Sbjct: 10 YEYCRKITQRASKTFYWGSSFLPQPKRKAIWAVYAFCRMVDDIVDEAVEAEETREPRTA- 68
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQD-----AIEDITKRMGA-- 149
H+Y G K+ + +D +H S + G+G D A ED+ +
Sbjct: 69 ---HLY--------GVKDPRCELDYWHQ-SLQHVYNGEGSGDSPIMQAWEDMLQTYAVPI 116
Query: 150 --------GMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNS 200
G+A + + +S + + YCY VAG VGL S +F G D + +
Sbjct: 117 KPALELLDGVAMDLSNRRYQSFAELELYCYRVAGTVGLLTSPIF---GYNDERALTYAVE 173
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+G+ LQ TNI+RD ED+ + R++ P E ++ EDL+
Sbjct: 174 LGIALQLTNILRDVGEDLR---RNRIYLPLEEMERFRYSEEDLQ 214
>gi|223042326|ref|ZP_03612375.1| dehydrosqualene synthase (Diapophytoene synthase)
(4,4'-diapophytoene synthase) (DAP synthase)
[Staphylococcus capitis SK14]
gi|417907309|ref|ZP_12551084.1| dehydrosqualene synthase [Staphylococcus capitis VCU116]
gi|222443989|gb|EEE50085.1| dehydrosqualene synthase (Diapophytoene synthase)
(4,4'-diapophytoene synthase) (DAP synthase)
[Staphylococcus capitis SK14]
gi|341596594|gb|EGS39193.1| dehydrosqualene synthase [Staphylococcus capitis VCU116]
Length = 287
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 35/285 (12%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E ++ +C+ ++ + S+SF+ L + R AV Y V R +D D P I
Sbjct: 5 EKNFKYCHQIMKEHSKSFSYAFDYLPENERKAVWAIYAVCRIIDDSIDVYEDP-----QI 59
Query: 94 LIAFHRHVYDREWHFSCGTKEYK---VLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
L H + E + E+K ++M+ + VS F + + + I+ + +
Sbjct: 60 LKNIHDDIITIEKNHDVENYEFKSNQMIMEALYTVSQNFTIEYQSFYNLIQTVYEDQDFE 119
Query: 151 MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNI 210
M E+ D+ YCY VAG VG L+ + E+ ++ +G LQ TNI
Sbjct: 120 M-------FETDDELLNYCYGVAGTVGEVLTPVLAEQPNEETY--RIARKLGEALQITNI 170
Query: 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDC 270
+RD ED R+++ + S++ +E+ + N+ + Q ++ +A + ED
Sbjct: 171 LRDVGED---FENDRIYFSKSSLSRFDVSIEN---DFNNGVSQQYVDLWEHHAKLAQED- 223
Query: 271 LKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRR 315
Y AL + +F A P I+ + ++ ++RG++ R
Sbjct: 224 --YDIALSNLGVFNKEAQP-IIELASI--------IYRGILDEVR 257
>gi|291619715|ref|YP_003522457.1| CrtB [Pantoea ananatis LMG 20103]
gi|378769594|ref|YP_005198071.1| phytoene synthase CrtB [Pantoea ananatis LMG 5342]
gi|386076656|ref|YP_005990739.1| phytoene synthase CrtB [Pantoea ananatis PA13]
gi|30923192|sp|P21683.2|CRTB_PANAN RecName: Full=Phytoene synthase
gi|22474503|dbj|BAA14128.2| crtB [Pantoea ananatis]
gi|291154745|gb|ADD79329.1| CrtB [Pantoea ananatis LMG 20103]
gi|354685525|gb|AER34892.1| phytoene synthase CrtB [Pantoea ananatis PA13]
gi|365189085|emb|CCF12034.1| phytoene synthase CrtB [Pantoea ananatis LMG 5342]
gi|392931107|gb|AFM91069.1| phytoene synthase [synthetic construct]
Length = 309
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD ++ + P L + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRLMQLEMK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQ-DAIEDITKRMGAGMAKFICKEVESID 163
G++ ++ F V+ A ++ Y D +E M A++ +D
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMAH-DIAPAYAFDHLEGFA--MDVREAQY-----SQLD 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD ++D +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVDDAH 182
>gi|329937104|ref|ZP_08286733.1| squalene/phytoene synthase [Streptomyces griseoaurantiacus M045]
gi|329303711|gb|EGG47596.1| squalene/phytoene synthase [Streptomyces griseoaurantiacus M045]
Length = 316
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Query: 26 QAEKQIPPE--PHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDT 83
++E+ + P + +C ++ + +R+FA I+ L T R A+ Y R +D + D
Sbjct: 6 ESEQHVSPPVLAAYRYCETVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDI-GDG 64
Query: 84 SIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAF-LELGKGYQDAIED 142
+ DVK L R + R G + + H + F + LG G + ++
Sbjct: 65 DLADDVKKARL-EETRALLTRVRAGEVGEDDTDPVAVALAHAADRFPIPLG-GLDELLDG 122
Query: 143 ITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS-----L 197
+ + + E+ DD YC VAG +G +F GTE AP +
Sbjct: 123 V-------LMDVAGETYETWDDLKAYCRCVAGAIGRLSLGVF---GTEPEAPGADRASEY 172
Query: 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED R + P + +K+
Sbjct: 173 ADTLGLALQLTNILRDVREDAE---TGRTYLPADDLAKF 208
>gi|365891316|ref|ZP_09429749.1| Phytoene synthase [Bradyrhizobium sp. STM 3809]
gi|365332730|emb|CCE02280.1| Phytoene synthase [Bradyrhizobium sp. STM 3809]
Length = 333
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 157 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
+E ES+ D +YCY+VAG+VG+ +S + A ED D ++ +G+ LQ TNI RD +E
Sbjct: 125 REYESLSDTLDYCYHVAGVVGVMMSAIMGAR--EDATLDRAAD-LGIALQLTNIARDVIE 181
Query: 217 DINEIPKCRMFWPRE 231
D R++ PR+
Sbjct: 182 DAQ---AGRIYLPRQ 193
>gi|345003393|ref|YP_004806247.1| squalene synthase HpnD [Streptomyces sp. SirexAA-E]
gi|344319019|gb|AEN13707.1| squalene synthase HpnD [Streptomyces sp. SirexAA-E]
Length = 313
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P + +++C ++ + +R+FA I+ L R A+ Y R +D + D P +
Sbjct: 11 PVQAAYSYCEAVTGQQARNFAYGIRLLPYAKRQAMSALYAFSRRVDDIGDGALEPETKRT 70
Query: 92 PILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
+ R + DR +E V D V+ A + + + + + + + +
Sbjct: 71 --RLEGTRELLDR-------IREGAVDEDDTDPVAVALADAARRFPLPLGGLDELIDGVL 121
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS-----LSNSMGLFLQ 206
+ E+ DD YC VAG +G +F GTE P + ++++GL LQ
Sbjct: 122 MDVRGEHYETWDDLRTYCRCVAGAIGRLSLGVF---GTEPGVPGADRAAEYADTLGLALQ 178
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
TNI+RD ED R + P + +K+
Sbjct: 179 LTNILRDVREDAG---NGRTYLPADDLAKF 205
>gi|425452872|ref|ZP_18832687.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 7941]
gi|389765199|emb|CCI08887.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 7941]
Length = 269
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHR 99
++L + SR+F + I +L L AV YL +RA+D VED + K IL I+ +
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 100 HVYDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ + F+ G ++L + + + + D T M MA +
Sbjct: 69 QAGTQNSTKEDFTFGLVHREILPEVTLRIGEWAMLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEVQLDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPQGPALDFCKIPLALAHGTL 245
>gi|440756383|ref|ZP_20935584.1| squalene/phytoene synthase family protein [Microcystis aeruginosa
TAIHU98]
gi|440173605|gb|ELP53063.1| squalene/phytoene synthase family protein [Microcystis aeruginosa
TAIHU98]
Length = 269
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHR 99
++L + SR+F + I +L L AV YL +RA+D VED + K IL I+ +
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 100 HVYDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ + F+ G ++L + + + + D T M MA +
Sbjct: 69 QAGTQNSTKEDFTFGLVHREILPEVTLRIGEWAMLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEVELDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WK---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPQGPALDFCKIPLALAHGTL 245
>gi|325559609|gb|ADZ30891.1| phytoene synthase [MoClo level 2 destination vector pL2-1]
gi|325559620|gb|ADZ30899.1| phytoene synthase [MoClo end-linker vector pELR-1]
Length = 296
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD ++ + P L + + E
Sbjct: 5 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRLMQLEMK 64
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQ-DAIEDITKRMGAGMAKFICKEVESID 163
G++ ++ F V+ A ++ Y D +E M A++ +D
Sbjct: 65 TRQAYAGSQMHEPAFAAFQEVAMAH-DIAPAYAFDHLEGFA--MDVREAQY-----SQLD 116
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD ++D +
Sbjct: 117 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVDDAH 169
>gi|291449097|ref|ZP_06588487.1| squalene/phytoene synthase [Streptomyces roseosporus NRRL 15998]
gi|291352044|gb|EFE78948.1| squalene/phytoene synthase [Streptomyces roseosporus NRRL 15998]
Length = 313
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P + +++C ++ + +R+FA I+ L + R A+ Y R +D + D + K
Sbjct: 11 PVQAAYSYCEAVTGQQARNFAYGIRLLPNEKRQAMSALYAFSRRVDDI-GDGELDAGTKR 69
Query: 92 PILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGM 151
L + R + DR H KV D V+ A + + + + + + + +
Sbjct: 70 TRLES-TRELLDRVRHG-------KVEEDDTDPVAVALADAARRFPLPLGGLDELIDGVL 121
Query: 152 AKFICKEVESIDDYDEYCYYVAGLVG---LGL-SKLFYASGTEDLAPDSLSNSMGLFLQK 207
E+ DD YC VAG +G LG+ A G E A ++++GL LQ
Sbjct: 122 MDVRGATYETWDDLKTYCRCVAGAIGRLSLGVFGTAPGARGAERAA--EYADTLGLALQL 179
Query: 208 TNIIRDYLEDINEIPKCRMFWPREIWSKY 236
TNI+RD ED R + P + +K+
Sbjct: 180 TNILRDVREDAG---NGRTYLPADDLAKF 205
>gi|288575744|ref|ZP_05977515.2| squalene synthase HpnD [Neisseria mucosa ATCC 25996]
gi|288567224|gb|EFC88784.1| squalene synthase HpnD [Neisseria mucosa ATCC 25996]
Length = 282
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+A+ + Y R LD V DD S P + +
Sbjct: 6 YCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATL----- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + +M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLNKVFGGVMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDDRTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMQQF 185
>gi|161870016|ref|YP_001599185.1| phytoene synthase, putative [Neisseria meningitidis 053442]
gi|161595569|gb|ABX73229.1| phytoene synthase, putative [Neisseria meningitidis 053442]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV I Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ G D ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGYLIARIL---GFSDGKTLQYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|386714061|ref|YP_006180384.1| apo-8'-phytoene synthase [Halobacillus halophilus DSM 2266]
gi|221185791|gb|ACM07426.1| CrtM [Halobacillus halophilus DSM 2266]
gi|384073617|emb|CCG45110.1| apo-8'-phytoene synthase [Halobacillus halophilus DSM 2266]
Length = 278
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 54/301 (17%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C +++ K S++F+ L + AV Y R D + D+ P + + F
Sbjct: 11 CKNIIEKHSKTFSKAFAMLPKHQKRAVWAIYAFCRRADDIVDEGENPKEELEAFAVEFDL 70
Query: 100 HVYDR-EWHFSCGTKEYKVLMDQFHHVS---TAFLELGKGYQDAIEDITKRMGAGMAKFI 155
+ R E C + L D F F E+ G +RM
Sbjct: 71 FMEGRLETEDPC----WIALQDAFERFPLDPAPFYEMIVG---------QRM-----DLY 112
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN------SMGLFLQKTN 209
K +++ DD YCY+VA VGL L + LAP +S +G +Q TN
Sbjct: 113 PKTIDTKDDLLHYCYHVASTVGLMLLPV--------LAPGKVSRVKTGAIELGYAMQITN 164
Query: 210 IIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269
I+RD ED++ R++ P+++ +Y DL ++ ++ +Q D+ +A + +
Sbjct: 165 ILRDIGEDLD---NHRIYIPKQMMIEYGYTRTDLHNKKVNEAFIQLWEDLAQDAEHYYRN 221
Query: 270 CLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTNNMT 329
L + L ++ ++ +G A +++R +++ R +V + N ++
Sbjct: 222 AL---ATLPEYPVYSRT------PVGGAA------KMYRAIIQTVRNNDYQVFGKRNYVS 266
Query: 330 D 330
D
Sbjct: 267 D 267
>gi|289767674|ref|ZP_06527052.1| squalene synthase HpnD [Streptomyces lividans TK24]
gi|289697873|gb|EFD65302.1| squalene synthase HpnD [Streptomyces lividans TK24]
Length = 316
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 33 PEP---HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDV 89
P P +++C ++ + +R+FA I+ L T R A+ Y R +D + D + DV
Sbjct: 12 PAPVLAAYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIGDGV-LADDV 70
Query: 90 KVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGA 149
KV L D ++ V D V+ A + + + + + + +
Sbjct: 71 KVTRL--------DETRAVLARIQDGAVEEDDTDPVAVALADAARRFPIPLGGLDELIDG 122
Query: 150 GMAKFICKEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQ 206
+ E+ DD YC VAG +G LG+ + + AP+ ++++GL LQ
Sbjct: 123 VQMDLRGETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARGAERAPE-YADTLGLALQ 181
Query: 207 KTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
TNI+RD ED R + P + +K+
Sbjct: 182 LTNILRDVREDAE---GGRTYLPADDLAKF 208
>gi|433521864|ref|ZP_20478555.1| squalene synthase HpnD [Neisseria meningitidis 61103]
gi|432259681|gb|ELL14951.1| squalene synthase HpnD [Neisseria meningitidis 61103]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV I Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ G D ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARIL---GFSDGKTLQYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|425462678|ref|ZP_18842145.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9808]
gi|389824237|emb|CCI26966.1| Similar to tr|Q4C0L2|Q4C0L2_CROWT Squalene/phytoene synthase
[Microcystis aeruginosa PCC 9808]
Length = 269
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHR 99
++L + SR+F + I +L L AV YL +RA+D VED + K IL I+ +
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 100 HVYDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ + F+ G ++L + + + + D T M MA +
Sbjct: 69 QAGTQNSTKEDFTFGLVHREILPEVTLRIGEWAMLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEVQLDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED+ + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDLR---RGVSFLPQG-WT---------------------ISDIHNYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L FC IP +A GTL
Sbjct: 222 TQSLPKGPALDFCKIPLALAHGTL 245
>gi|421559179|ref|ZP_16005054.1| squalene synthase HpnD [Neisseria meningitidis 92045]
gi|402336574|gb|EJU71834.1| squalene synthase HpnD [Neisseria meningitidis 92045]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV I Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ G D ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARIL---GFSDGKTLQYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|317488644|ref|ZP_07947186.1| squalene/phytoene synthase [Eggerthella sp. 1_3_56FAA]
gi|325831711|ref|ZP_08164928.1| phytoene/squalene synthetase [Eggerthella sp. HGA1]
gi|316912250|gb|EFV33817.1| squalene/phytoene synthase [Eggerthella sp. 1_3_56FAA]
gi|325486582|gb|EGC89031.1| phytoene/squalene synthetase [Eggerthella sp. HGA1]
Length = 292
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLR-ALDTVEDDTSIPTDVKVPILI 95
+A+C ++ + S SF L R +V Y R A D V+ D S
Sbjct: 14 FAWCEDVIRRNSHSFYRAFSLLPACKRQSVYALYAFCRLADDCVDRDASA---------- 63
Query: 96 AFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
A V D F GT L V ++F + + D +E + +
Sbjct: 64 AKLEQVQDDLARFFAGTVVDAPLWRALDAVCSSFDLDAQPFFDMLEGQRRDLS------- 116
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
++ E++ D +EY YYVAG VGL L + +A+ D + ++G+ +Q TNI+RD
Sbjct: 117 FRQPETMGDLEEYGYYVAGSVGLMLLPILHAASPVDDGLRDSAVALGVAMQLTNILRDVG 176
Query: 216 EDINEIPKCRMFWPREI 232
ED+ R++ P E+
Sbjct: 177 EDLE---NGRVYLPAEV 190
>gi|89096857|ref|ZP_01169748.1| phytoene synthase [Bacillus sp. NRRL B-14911]
gi|89088237|gb|EAR67347.1| phytoene synthase [Bacillus sp. NRRL B-14911]
Length = 300
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C ++ K S+SF QL + NAV Y R D D KV +L
Sbjct: 14 YCERIIKKHSKSFYYAFSQLPREKANAVYAIYAFCRTADECADGKH-SFKKKVQLLRQLK 72
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
+ + H ++ L F+ Y+ I ++
Sbjct: 73 KELDLFNDHAELDKPLWRALRQVFN-----------TYEMDISPFYDQLDGQSMDLSFTA 121
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
++++ ++Y YYVAG VGL L + + + DL S+ ++G+ +Q TNI+RD ED
Sbjct: 122 PNTMNELEKYSYYVAGSVGLMLLPVIASKPSADL--HSIVVNLGVAMQITNILRDIGEDY 179
Query: 219 NEIPKCRMFWPREIWSKYVNKLEDL 243
+E K R++ P E S + EDL
Sbjct: 180 HE--KNRIYLPGEELSHFQYSQEDL 202
>gi|419798298|ref|ZP_14323713.1| squalene synthase HpnD [Neisseria sicca VK64]
gi|385695093|gb|EIG25664.1| squalene synthase HpnD [Neisseria sicca VK64]
Length = 282
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+A+ + Y R LD V DD S P + +
Sbjct: 6 YCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATL----- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + +M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGVMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDDRTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMQRF 185
>gi|385851223|ref|YP_005897738.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M04-240196]
gi|416182961|ref|ZP_11612361.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M13399]
gi|416213360|ref|ZP_11622303.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M01-240013]
gi|325134344|gb|EGC56990.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M13399]
gi|325144451|gb|EGC66751.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M01-240013]
gi|325206046|gb|ADZ01499.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M04-240196]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV I Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ G D ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARIL---GFSDGKTLQYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|257792010|ref|YP_003182616.1| squalene/phytoene synthase [Eggerthella lenta DSM 2243]
gi|257475907|gb|ACV56227.1| Squalene/phytoene synthase [Eggerthella lenta DSM 2243]
Length = 292
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLR-ALDTVEDDTSIPTDVKVPILI 95
+A+C ++ + S SF L R +V Y R A D V+ D S
Sbjct: 14 FAWCEDVIRRNSHSFYRAFSLLPACKRQSVYALYAFCRLADDCVDRDASA---------- 63
Query: 96 AFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFI 155
A V D F GT L V ++F + + D +E + +
Sbjct: 64 AKLEQVQDDLARFFAGTVVDAPLWRALDAVCSSFDLDAQPFFDMLEGQRRDLS------- 116
Query: 156 CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYL 215
++ E++ D +EY YYVAG VGL L + +A+ D + ++G+ +Q TNI+RD
Sbjct: 117 FRQPETMGDLEEYGYYVAGSVGLMLLPILHAASPVDDGLRDSAVALGVAMQLTNILRDVG 176
Query: 216 EDINEIPKCRMFWPREI 232
ED+ R++ P E+
Sbjct: 177 EDLE---NGRVYLPAEV 190
>gi|385341919|ref|YP_005895790.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M01-240149]
gi|385857232|ref|YP_005903744.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
NZ-05/33]
gi|421544404|ref|ZP_15990480.1| squalene synthase HpnD [Neisseria meningitidis NM140]
gi|421546516|ref|ZP_15992561.1| squalene synthase HpnD [Neisseria meningitidis NM183]
gi|421548767|ref|ZP_15994791.1| squalene synthase HpnD [Neisseria meningitidis NM2781]
gi|421552720|ref|ZP_15998692.1| squalene synthase HpnD [Neisseria meningitidis NM576]
gi|421554755|ref|ZP_16000694.1| squalene synthase HpnD [Neisseria meningitidis 98008]
gi|421557254|ref|ZP_16003159.1| squalene synthase HpnD [Neisseria meningitidis 80179]
gi|325202125|gb|ADY97579.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M01-240149]
gi|325208121|gb|ADZ03573.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
NZ-05/33]
gi|402322761|gb|EJU58211.1| squalene synthase HpnD [Neisseria meningitidis NM183]
gi|402323595|gb|EJU59037.1| squalene synthase HpnD [Neisseria meningitidis NM140]
gi|402325446|gb|EJU60855.1| squalene synthase HpnD [Neisseria meningitidis NM2781]
gi|402329899|gb|EJU65248.1| squalene synthase HpnD [Neisseria meningitidis NM576]
gi|402331908|gb|EJU67239.1| squalene synthase HpnD [Neisseria meningitidis 98008]
gi|402334892|gb|EJU70167.1| squalene synthase HpnD [Neisseria meningitidis 80179]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV I Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S ++ L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDSKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMRRF 185
>gi|193213959|ref|YP_001995158.1| squalene/phytoene synthase [Chloroherpeton thalassium ATCC 35110]
gi|193087436|gb|ACF12711.1| Squalene/phytoene synthase [Chloroherpeton thalassium ATCC 35110]
Length = 317
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 30 QIPPEP---HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTV----EDD 82
Q+ PE + +C ++ + +++F Q L R +V Y + R +D + ED
Sbjct: 38 QLNPEEVSESYEYCRAVSKRHAKTFYFATQFLPKSKRKSVYAVYALCRYVDDIVDRAEDK 97
Query: 83 TSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIED 142
S T K I+ + D E +C E L++ + + A+L+ K YQ +E
Sbjct: 98 LSRQTLTKEKIVFLIDKWKTDLE---ACYRGE---LIN--NPIMIAWLDTLKKYQIPMEL 149
Query: 143 ITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMG 202
+ + K E+ D+ YCY VA +VGL S++F E L + +G
Sbjct: 150 PFELIEGVCMDLKFKSFETFDELYIYCYKVASVVGLMTSEIFGYKNKEAL---DYAIKLG 206
Query: 203 LFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK 244
+ +Q TNI+RD ED + R++ P E +++ E LK
Sbjct: 207 IAMQLTNILRDVGEDSQ---RGRIYLPLEDLARFNYSPEKLK 245
>gi|255065896|ref|ZP_05317751.1| squalene synthase HpnD [Neisseria sicca ATCC 29256]
gi|255049807|gb|EET45271.1| squalene synthase HpnD [Neisseria sicca ATCC 29256]
Length = 282
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+A+ + Y R LD V DD S P + +
Sbjct: 6 YCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATL----- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + +M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGVMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDDRTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMQRF 185
>gi|340362625|ref|ZP_08684997.1| phytoene synthase [Neisseria macacae ATCC 33926]
gi|339887147|gb|EGQ76733.1| phytoene synthase [Neisseria macacae ATCC 33926]
Length = 282
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+A+ + Y R LD V DD S P + +
Sbjct: 6 YCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATL----- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + +M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGVMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDDRTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMQRF 185
>gi|440698196|ref|ZP_20880557.1| squalene synthase HpnD [Streptomyces turgidiscabies Car8]
gi|440279411|gb|ELP67306.1| squalene synthase HpnD [Streptomyces turgidiscabies Car8]
Length = 316
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 29 KQIPPEPH--------WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVE 80
+ + EPH +++C S+ + +R+FA I+ L T R A+ Y R +D +
Sbjct: 3 RSVESEPHVSAPVLAAYSYCESITGQQARNFAYGIRLLPTSKRRAMSALYAFSRRVDDIG 62
Query: 81 DDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAF-LELGKGYQDA 139
D P +VK L R + R + + + H T F + LG G +
Sbjct: 63 DGPLAP-EVKAARL-EDTRALLARVRAGAVDEDDTDPVAVALSHAGTHFPIPLG-GLDEL 119
Query: 140 IEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS--- 196
I+ + + + E+ DD YC VAG +G +F GTE A S
Sbjct: 120 IDGVVMDVHG-------ETYETWDDLKVYCRCVAGAIGRLSLGVF---GTEPGARGSERA 169
Query: 197 --LSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
++++GL LQ TNI+RD ED + R + P + +K+
Sbjct: 170 FEYADTLGLALQLTNILRDIREDAD---SGRTYLPADDLAKF 208
>gi|440758994|ref|ZP_20938148.1| Phytoene synthase [Pantoea agglomerans 299R]
gi|436427254|gb|ELP24937.1| Phytoene synthase [Pantoea agglomerans 299R]
Length = 309
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNNTPSLQSAEQRLAQLEMK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A D + AG A + + +++D
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVRETRYQTLD 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGR 185
Query: 224 CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
C + P E ++ E L N + +V A + + L + L
Sbjct: 186 C--YLPAEWLTEAGLTRETLADPHNRQALSRVARRLVETAEPYYQSSLAGLPGL 237
>gi|304387566|ref|ZP_07369755.1| squalene synthase HpnD [Neisseria meningitidis ATCC 13091]
gi|418288379|ref|ZP_12900868.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
NM233]
gi|418290601|ref|ZP_12902735.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
NM220]
gi|421538100|ref|ZP_15984277.1| squalene synthase HpnD [Neisseria meningitidis 93003]
gi|304338453|gb|EFM04574.1| squalene synthase HpnD [Neisseria meningitidis ATCC 13091]
gi|372201281|gb|EHP15224.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
NM220]
gi|372202019|gb|EHP15884.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
NM233]
gi|402316919|gb|EJU52458.1| squalene synthase HpnD [Neisseria meningitidis 93003]
Length = 290
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDDQTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMRRF 185
>gi|304395260|ref|ZP_07377144.1| Phytoene synthase [Pantoea sp. aB]
gi|304357513|gb|EFM21876.1| Phytoene synthase [Pantoea sp. aB]
Length = 309
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNNTPSLQSAEQRLAQLEMK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A D + AG A + + +++D
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVRETRYQTLD 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGR 185
Query: 224 CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277
C + P E ++ E L N + +V A + + L + L
Sbjct: 186 C--YLPAEWLTEAGLTRETLADPHNRQALSRVARRLVETAEPYYQSSLAGLPGL 237
>gi|15677007|ref|NP_274159.1| phytoene synthase [Neisseria meningitidis MC58]
gi|15677043|ref|NP_274195.1| phytoene synthase [Neisseria meningitidis MC58]
gi|385853188|ref|YP_005899702.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
H44/76]
gi|416196574|ref|ZP_11618269.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
CU385]
gi|427827053|ref|ZP_18994097.1| squalene synthase HpnD [Neisseria meningitidis H44/76]
gi|433465117|ref|ZP_20422599.1| squalene synthase HpnD [Neisseria meningitidis NM422]
gi|433488452|ref|ZP_20445614.1| squalene synthase HpnD [Neisseria meningitidis M13255]
gi|433490498|ref|ZP_20447624.1| squalene synthase HpnD [Neisseria meningitidis NM418]
gi|433505051|ref|ZP_20461990.1| squalene synthase HpnD [Neisseria meningitidis 9506]
gi|433507180|ref|ZP_20464088.1| squalene synthase HpnD [Neisseria meningitidis 9757]
gi|433509578|ref|ZP_20466447.1| squalene synthase HpnD [Neisseria meningitidis 12888]
gi|433511385|ref|ZP_20468212.1| squalene synthase HpnD [Neisseria meningitidis 4119]
gi|7226367|gb|AAF41518.1| putative phytoene synthase [Neisseria meningitidis MC58]
gi|7226405|gb|AAF41553.1| putative phytoene synthase [Neisseria meningitidis MC58]
gi|316985021|gb|EFV63974.1| squalene synthase HpnD [Neisseria meningitidis H44/76]
gi|325140314|gb|EGC62837.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
CU385]
gi|325200192|gb|ADY95647.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
H44/76]
gi|432203061|gb|ELK59115.1| squalene synthase HpnD [Neisseria meningitidis NM422]
gi|432223285|gb|ELK79066.1| squalene synthase HpnD [Neisseria meningitidis M13255]
gi|432227489|gb|ELK83198.1| squalene synthase HpnD [Neisseria meningitidis NM418]
gi|432241176|gb|ELK96706.1| squalene synthase HpnD [Neisseria meningitidis 9506]
gi|432241545|gb|ELK97074.1| squalene synthase HpnD [Neisseria meningitidis 9757]
gi|432246966|gb|ELL02412.1| squalene synthase HpnD [Neisseria meningitidis 12888]
gi|432247433|gb|ELL02870.1| squalene synthase HpnD [Neisseria meningitidis 4119]
Length = 290
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDDQTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMRRF 185
>gi|254262244|emb|CAZ90571.1| Phytoene synthase crtB [Enterobacter helveticus]
Length = 308
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIP----------TDVKVPILIAF 97
S+SF + + R +V + Y R D V DD ++ T+ ++ L A
Sbjct: 17 SKSFNTAAKLFDAETRRSVLMLYTWCRHCDDVIDDQTLGFAAGTRAETGTEQRLAELQAL 76
Query: 98 HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
R Y G F V+ A + D IE G A +
Sbjct: 77 TRRAYR-------GEPMSDPAFAAFQEVALAHAIPERQALDHIE--------GFAMDVRG 121
Query: 158 E-VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
E E+I+D YCY+VAG+VGL ++++ G D A + + +GL Q TNI RD +E
Sbjct: 122 EHYETIEDTLRYCYHVAGVVGLMMARVM---GARDEAALNQACDLGLAFQLTNIARDIVE 178
Query: 217 DIN 219
D +
Sbjct: 179 DAH 181
>gi|21225053|ref|NP_630832.1| phytoene synthase [Streptomyces coelicolor A3(2)]
gi|4539164|emb|CAB39693.1| putative phytoene synthase [Streptomyces coelicolor A3(2)]
Length = 312
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ + +R+FA I+ L T R A+ Y R +D + D + DVKV L
Sbjct: 15 YSYCEAVTGQQARNFAHGIRLLPTPKRRAMSALYAFSRRVDDIGDGV-LADDVKVTRL-- 71
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
D ++ V D V+ A + + + + + + +
Sbjct: 72 ------DETRAVLARIQDGAVEEDDTDPVAVALADAARRFPIPLGGLDELIDGVQMDLRG 125
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ E+ DD YC VAG +G LG+ + + AP+ ++++GL LQ TNI+RD
Sbjct: 126 ETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARGAERAPE-YADTLGLALQLTNILRD 184
Query: 214 YLEDINEIPKCRMFWPREIWSKY 236
ED R + P + +K+
Sbjct: 185 VREDAE---GGRTYLPADDLAKF 204
>gi|298369240|ref|ZP_06980558.1| squalene synthase HpnD [Neisseria sp. oral taxon 014 str. F0314]
gi|298283243|gb|EFI24730.1| squalene synthase HpnD [Neisseria sp. oral taxon 014 str. F0314]
Length = 290
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 30/204 (14%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L R A+ + Y+ R LD V DD+S P + A +
Sbjct: 14 YCRLKAAESKSSFLSGFRFLPQAQREAMTVLYVFCRELDDVADDSSNPAVAQA----ALN 69
Query: 99 RHVYDREWHFSCGTKEY------KVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
D F+ E+ K ++ F F EL G Q M A
Sbjct: 70 WWRADLAKAFTEQMPEHPVNQALKTVLHSFALPHGEFSELIDGMQ---------MDLDQA 120
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
++ S DD YC AG+VG ++++ + + L ++ MGL LQ TNIIR
Sbjct: 121 RY-----NSFDDLKLYCRRAAGVVGCLIARILGFTQPQTL---EYADKMGLALQLTNIIR 172
Query: 213 DYLEDINEIPKCRMFWPREIWSKY 236
D ED K R++ P E ++
Sbjct: 173 DVGEDAR---KGRIYLPVEDMQRF 193
>gi|443665635|ref|ZP_21133658.1| squalene/phytoene synthase family protein [Microcystis aeruginosa
DIANCHI905]
gi|159029470|emb|CAO87617.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443331349|gb|ELS46011.1| squalene/phytoene synthase family protein [Microcystis aeruginosa
DIANCHI905]
Length = 269
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPIL--IAFHR 99
++L + SR+F + I +L L AV YL +RA+D VED + K IL I+ +
Sbjct: 9 TILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNL 68
Query: 100 HVYDR---EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
+ + F+ G ++L + + + + D T M MA +
Sbjct: 69 QAGTQNSTKEDFTFGLVHREILPEVTLRIGEWAMLAPDSIAPRVWDATAAMADRMAYWAG 128
Query: 157 K--EVESIDDYDEYCYYVAGLVGLGLSKLF-YASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
++ + + D+Y + VAG VGL LS L+ + GT+ S + G LQ NI R+
Sbjct: 129 NNWDIRTEVELDQYTFSVAGAVGLLLSDLWNWYDGTQ--TNRSYAIGFGRGLQAVNIARN 186
Query: 214 YLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273
+ ED + F P+ W+ ++D+ A +++ Y
Sbjct: 187 HGEDRR---RGVSFLPQG-WT---------------------ISDIHDYARRNLKLADYY 221
Query: 274 MSALRDHAIFRFCAIPQIMAIGTL 297
+L + FC IP +A GTL
Sbjct: 222 TQSLPNGPALDFCKIPLALAHGTL 245
>gi|421565430|ref|ZP_16011205.1| squalene synthase HpnD [Neisseria meningitidis NM3081]
gi|402344556|gb|EJU79692.1| squalene synthase HpnD [Neisseria meningitidis NM3081]
Length = 290
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S ++ L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDSKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMRRF 185
>gi|319638703|ref|ZP_07993463.1| phytoene synthase [Neisseria mucosa C102]
gi|317400087|gb|EFV80748.1| phytoene synthase [Neisseria mucosa C102]
Length = 282
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + RNA+ + Y R LD V D TD+ V I +
Sbjct: 6 YCRQKAAESHSSFLSGFRFLSVEKRNAITVLYAFCRELDDVVDGC---TDLNVA-QITLN 61
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
D E F+ E+ V + +F +L K +A+ D +M A++
Sbjct: 62 WWRSDLEKVFNNEMPEHPV-HQALKDIRASF-DLPKNEFEALID-GMQMDLEQARY---- 114
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S D+ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 115 -GSFDELKLYCHRVAGVVGRLIARILGFSNPKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E K+
Sbjct: 171 RQ---GRIYLPIEEMQKF 185
>gi|302522952|ref|ZP_07275294.1| squalene synthase HpnD [Streptomyces sp. SPB78]
gi|302431847|gb|EFL03663.1| squalene synthase HpnD [Streptomyces sp. SPB78]
Length = 312
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ +++FA I+ L D R A+ Y R +D + D T P +
Sbjct: 15 YGYCETVTGAEAKNFAYGIRLLPGDKRRAMSAVYAFSRRVDDIGDGTLAPEEKT------ 68
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R RE TK+ V D V+ A + + + + + + + +
Sbjct: 69 -RRLNECRELLQRVRTKD--VAEDDTDPVAVALADTARRFPVPLGALDELIDGVLMDVQG 125
Query: 157 KEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTED--LAPDSLSNSMGLFLQKTNIIRD 213
+ + D+ +YC VAG +G L L G D AP+ +N++GL LQ TNI+RD
Sbjct: 126 RAYRTWDELADYCRCVAGAIGRLSLGIFGVRPGARDRVRAPE-YANTLGLALQLTNILRD 184
Query: 214 YLEDINEIPKCRMFWPREIWSKY 236
ED R + P E K+
Sbjct: 185 VREDAA---NGRTYLPAEDLDKF 204
>gi|162147407|ref|YP_001601868.1| phytoene synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785984|emb|CAP55565.1| putative phytoene synthase [Gluconacetobacter diazotrophicus PAl 5]
Length = 307
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 50 SFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS 109
SF ++ L D R + Y R +D V DD P D K +L A+H +
Sbjct: 48 SFGKGMRILAPDRRYGMYAVYAFCRLVDDVADDDGTPED-KSALLRAWHERIA------G 100
Query: 110 CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDD--YDE 167
+D+ V A +L + DA+ D GM + + D+ +D
Sbjct: 101 LYAGRATDALDRVLSVVIARFDLRQADFDAVID-------GMMMDAQGPIVAPDEATFDL 153
Query: 168 YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
YC VA VG ++F + E D ++ +G LQ TNI+RD ED + R++
Sbjct: 154 YCDRVASAVGRLSVRVFGDASAE---ADRVAFHLGRALQITNILRDVAEDAQ---RGRLY 207
Query: 228 WPREIWSKY 236
PRE+ +++
Sbjct: 208 LPRELLTRF 216
>gi|163789581|ref|ZP_02184019.1| phytoene synthase [Carnobacterium sp. AT7]
gi|159875113|gb|EDP69179.1| phytoene synthase [Carnobacterium sp. AT7]
Length = 286
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
E++ D ++YC+YVAG VGL L + + +DL ++ ++GL +Q TNI+RD ED
Sbjct: 124 ETMSDLEKYCFYVAGSVGLMLLPVLASETDKDLTQTAV--NLGLAMQLTNILRDIGEDFQ 181
Query: 220 EIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA 263
I R++ P K +++LK ++ +DK ++ + A
Sbjct: 182 NI--GRVYIPISELEKENYSIQELKEKKVNDKFIRIWERLAQRA 223
>gi|390957738|ref|YP_006421495.1| phytoene/squalene synthetase [Terriglobus roseus DSM 18391]
gi|390412656|gb|AFL88160.1| phytoene/squalene synthetase [Terriglobus roseus DSM 18391]
Length = 313
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A C + + +++F L R+A+C Y +R D + D+ S D
Sbjct: 9 YAHCRVIAKREAKNFYYGFMALPAHKRDAMCAVYAFMRRADDISDEESYSLD-------- 60
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG------ 150
R V +W S + D ++ +++ G D D+ +++ AG
Sbjct: 61 -DRRVMMADWLASWRGERAVDAQDVQVFMAVRDVQVSFGVTD---DLLEKLIAGTTMDLD 116
Query: 151 -----------MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSN 199
+A + ES + + YCY VA +VGL ++F G + A D +
Sbjct: 117 PAAPAGVQRISVAGRTIDQYESAEALERYCYLVASVVGLVTIRIF---GFTNPAADEYAE 173
Query: 200 SMGLFLQKTNIIRDYLEDINEIPKCRMFWPRE 231
+GL Q TNI+RD ED + R++ P E
Sbjct: 174 QLGLAFQFTNILRDVKEDAE---RGRIYLPLE 202
>gi|318058276|ref|ZP_07976999.1| probable phytoene synthase [Streptomyces sp. SA3_actG]
gi|318076938|ref|ZP_07984270.1| probable phytoene synthase [Streptomyces sp. SA3_actF]
Length = 312
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ +++FA I+ L D R A+ Y R +D + D T P +
Sbjct: 15 YGYCETVTGAEAKNFAYGIRLLPGDKRRAMSAVYAFSRRVDDIGDGTLAPEEKT------ 68
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R RE TK+ V D V+ A + + + + + + + +
Sbjct: 69 -RRLNECRELLERVRTKD--VAEDDTDPVAVALADTARRFPVPLGALDELIDGVLMDVQG 125
Query: 157 KEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTEDL--APDSLSNSMGLFLQKTNIIRD 213
+ + D+ +YC VAG +G L L G D AP+ +N++GL LQ TNI+RD
Sbjct: 126 RAYRTWDELADYCRCVAGAIGRLSLGIFGVRPGARDRVHAPE-YANTLGLALQLTNILRD 184
Query: 214 YLEDINEIPKCRMFWPREIWSKY 236
ED R + P E K+
Sbjct: 185 VREDAA---NGRTYLPAEDLDKF 204
>gi|121634870|ref|YP_975115.1| poly-isoprenyl transferase [Neisseria meningitidis FAM18]
gi|385340069|ref|YP_005893941.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
G2136]
gi|416178149|ref|ZP_11610460.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M6190]
gi|416192206|ref|ZP_11616487.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
ES14902]
gi|416204469|ref|ZP_11620299.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
961-5945]
gi|433467276|ref|ZP_20424731.1| squalene synthase HpnD [Neisseria meningitidis 87255]
gi|433469324|ref|ZP_20426746.1| squalene synthase HpnD [Neisseria meningitidis 98080]
gi|433492541|ref|ZP_20449634.1| squalene synthase HpnD [Neisseria meningitidis NM586]
gi|433494686|ref|ZP_20451754.1| squalene synthase HpnD [Neisseria meningitidis NM762]
gi|433503261|ref|ZP_20460222.1| squalene synthase HpnD [Neisseria meningitidis NM126]
gi|120866576|emb|CAM10327.1| putative poly-isoprenyl transferase [Neisseria meningitidis FAM18]
gi|325132256|gb|EGC54950.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M6190]
gi|325138180|gb|EGC60751.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
ES14902]
gi|325142389|gb|EGC64798.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
961-5945]
gi|325198313|gb|ADY93769.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
G2136]
gi|432202718|gb|ELK58776.1| squalene synthase HpnD [Neisseria meningitidis 87255]
gi|432204007|gb|ELK60054.1| squalene synthase HpnD [Neisseria meningitidis 98080]
gi|432228327|gb|ELK84027.1| squalene synthase HpnD [Neisseria meningitidis NM586]
gi|432229889|gb|ELK85568.1| squalene synthase HpnD [Neisseria meningitidis NM762]
gi|432240026|gb|ELK95570.1| squalene synthase HpnD [Neisseria meningitidis NM126]
Length = 290
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHCVAGVVGCLIARILGFSDDQTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMRRF 185
>gi|209543973|ref|YP_002276202.1| squalene synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209531650|gb|ACI51587.1| squalene synthase HpnD [Gluconacetobacter diazotrophicus PAl 5]
Length = 298
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 50 SFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS 109
SF ++ L D R + Y R +D V DD P D K +L A+H +
Sbjct: 39 SFGKGMRILAPDRRYGMYAVYAFCRLVDDVADDDGTPED-KSALLRAWHERIA------G 91
Query: 110 CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDD--YDE 167
+D+ V A +L + DA+ D GM + + D+ +D
Sbjct: 92 LYAGRATDALDRVLSVVIARFDLRQADFDAVID-------GMMMDAQGPIVAPDEATFDL 144
Query: 168 YCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMF 227
YC VA VG ++F + E D ++ +G LQ TNI+RD ED + R++
Sbjct: 145 YCDRVASAVGRLSVRVFGDASAE---ADRVAFHLGRALQITNILRDVAEDAQ---RGRLY 198
Query: 228 WPREIWSKY 236
PRE+ +++
Sbjct: 199 LPRELLTRF 207
>gi|237748479|ref|ZP_04578959.1| phytoene synthase [Oxalobacter formigenes OXCC13]
gi|229379841|gb|EEO29932.1| phytoene synthase [Oxalobacter formigenes OXCC13]
Length = 278
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 15/181 (8%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C SF + + L D R A+ Y R +D + DD ++ L +
Sbjct: 6 YCQQKAAASGSSFYVSFRFLPADRRKAITALYAFCREVDDIVDDQTMDAAQARFKLDGWR 65
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
+ + + E G ++ + F H+ L++ + + I M + K
Sbjct: 66 KEIAEME----AGRPDHLITQALFPHLEAFNLDV-----NLLLAIIDGMEMDLDKV---R 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
ES DD +YC++VA VG+ +++F G + + +GL Q TNIIRD EDI
Sbjct: 114 YESFDDLKKYCWHVASAVGILAARIF---GLTNPQTGEYAEKLGLAFQLTNIIRDVGEDI 170
Query: 219 N 219
Sbjct: 171 K 171
>gi|261400243|ref|ZP_05986368.1| squalene synthase HpnD [Neisseria lactamica ATCC 23970]
gi|269210046|gb|EEZ76501.1| squalene synthase HpnD [Neisseria lactamica ATCC 23970]
Length = 290
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGKMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVRAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDGKTL---QYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|372274697|ref|ZP_09510733.1| Phytoene synthase [Pantoea sp. SL1_M5]
Length = 309
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEMK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A L D + AG A + + +++D
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMAHDILPAYAFDHL--------AGFAMDVHETRYQTLD 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGR 185
Query: 224 C 224
C
Sbjct: 186 C 186
>gi|429485116|gb|AFZ89043.1| CrtB [Pantoea agglomerans]
Length = 296
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 5 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEMK 64
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A D + AG A + + +++D
Sbjct: 65 TRQAYAGSQMHEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVHETRYQTLD 116
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 117 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGR 172
Query: 224 C 224
C
Sbjct: 173 C 173
>gi|390434746|ref|ZP_10223284.1| prephytoene pyrophosphate synthase [Pantoea agglomerans IG1]
Length = 309
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEMK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A D + AG A + + +++D
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVHETRYQTLD 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-EAGR 185
Query: 224 C 224
C
Sbjct: 186 C 186
>gi|408527806|emb|CCK25980.1| squalene synthase HpnD [Streptomyces davawensis JCM 4913]
Length = 316
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ + +R+FA I+ L T R A+ Y R +D + D ++ DVK+ L
Sbjct: 19 YSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDI-GDGALADDVKIARL-E 76
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + R + V D V+ A + + ++ + + + +
Sbjct: 77 ETRALLTR-------VRGGAVEEDDTDPVAVALAHAAEVFPIPLDGLDELIDGVLMDVRG 129
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ E+ DD YC VAG +G LG+ + + AP+ ++++GL LQ TNI+RD
Sbjct: 130 ETYETWDDLKAYCRCVAGAIGRLSLGVFGTEPGARGAERAPE-YADTLGLALQLTNILRD 188
Query: 214 YLEDINEIPKCRMFWPREIWSKY 236
ED R + P + +K+
Sbjct: 189 VREDAE---GGRTYLPADDLAKF 208
>gi|229918212|ref|YP_002886858.1| phytoene synthase [Exiguobacterium sp. AT1b]
gi|229469641|gb|ACQ71413.1| Phytoene synthase [Exiguobacterium sp. AT1b]
Length = 279
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C ++ K S +F L R AV Y R LD D++ P + +A
Sbjct: 10 CEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRPEES-----LAVFL 64
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-E 158
H +DR F G D + A ++ K Y +E + + GM + K
Sbjct: 65 HDFDR---FLAG-------YDLDEALWVALRDVWKRYDMDVEPFFE-LAEGMKWDLHKSR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNS--MGLFLQKTNIIRDYLE 216
E++++ ++Y YY A VGL L + + E + +G+ +Q TNI+RD E
Sbjct: 114 YETLEETEQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGIAMQLTNILRDVGE 173
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEE 247
D+N + R++ PR + +Y E L+ E
Sbjct: 174 DLN---RDRIYLPRTMMRQYGVSEEMLQQRE 201
>gi|148656243|ref|YP_001276448.1| squalene/phytoene synthase [Roseiflexus sp. RS-1]
gi|148568353|gb|ABQ90498.1| Squalene/phytoene synthase [Roseiflexus sp. RS-1]
Length = 337
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 59/306 (19%)
Query: 10 HPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIF 69
HP D P L L A RQ C + SRSF L Q L + R AV
Sbjct: 46 HPVDALPPLSLDAAYRQ-------------CVEITRINSRSFYLSSQLLPFEKRLAVRAL 92
Query: 70 YLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAF 129
Y R T +D TD L + V H ++ VL+ A+
Sbjct: 93 YAFCR---TSDDTVDRATDDPARALAQWVARV-----HAPHPPADHPVLL--------AW 136
Query: 130 LELGKGYQDAI-EDITKRMGAGMA-KFICKEVESIDDYDEYCYYVAGLVG-LGLSKLFYA 186
+ + Y AI + + + AG+A E+ DD YCY VA +VG L + + Y
Sbjct: 137 DDTVRRY--AIPQSLVDELLAGIAMDLTFHRYETFDDLWLYCYRVASVVGLLSMHIIGYR 194
Query: 187 SGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDL-KY 245
G AP ++ +G+ LQ TNI+RD ED + R++ P+ EDL ++
Sbjct: 195 DGA---APYAV--KLGVALQLTNILRDVGEDAQ---RGRIYLPQ----------EDLRRF 236
Query: 246 EENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIE 305
+ D +Q D ALM E ++ AL D A + I + G +A+ E
Sbjct: 237 DLTDDDILQGRRDERFRALMRFE--IERTHALYDEA---WPGIALLDPDGRMAIA-AAAE 290
Query: 306 VFRGVV 311
++RG++
Sbjct: 291 IYRGIL 296
>gi|345850205|ref|ZP_08803206.1| putative phytoene synthase [Streptomyces zinciresistens K42]
gi|345638379|gb|EGX59885.1| putative phytoene synthase [Streptomyces zinciresistens K42]
Length = 316
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+++C ++ + +R+FA I+ L T R A+ Y R +D + D ++P DVK L
Sbjct: 19 YSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDI-GDGALPGDVKAARL-E 76
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R + R +E++V D V+ A + + + + + +
Sbjct: 77 DTRELLTR-------VREHEVDEDDTDPVAVALAHAADAFPIPLGGLDELIDGVLMDVRG 129
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGL-SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ E+ DD YC VAG +G LG+ +A G E + ++++GL LQ TNI+R
Sbjct: 130 ETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPHARGIERAS--EYADTLGLALQLTNILR 187
Query: 213 DYLEDINEIPKCRMFWPREIWSKY 236
D ED R + P + +K+
Sbjct: 188 DVREDAE---GGRTYLPSDDLAKF 208
>gi|298717270|ref|YP_003729912.1| prephytoene pyrophosphate synthase [Pantoea vagans C9-1]
gi|298361459|gb|ADI78240.1| prephytoene pyrophosphate synthase [Pantoea vagans C9-1]
Length = 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + P L + + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYSWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEMK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-EVESID 163
G++ ++ F V+ A D + AG A + + +++D
Sbjct: 78 TRQAYAGSQMHEPAFAAFQEVAMA--------HDILPAYAFDHLAGFAMDVHETRYQTLD 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED E +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDNATLDRACDLGLAFQLTNIARDIVEDA-ETGR 185
Query: 224 C 224
C
Sbjct: 186 C 186
>gi|116620389|ref|YP_822545.1| farnesyl-diphosphate farnesyltransferase [Candidatus Solibacter
usitatus Ellin6076]
gi|116223551|gb|ABJ82260.1| farnesyl-diphosphate farnesyltransferase [Candidatus Solibacter
usitatus Ellin6076]
Length = 279
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 21/277 (7%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C + +++F L T R A+C Y +R D + D+ P K A
Sbjct: 9 YEYCLRVARTRAKNFYYSFVLLSTQQRKAMCAIYAFMRYCDDLSDE---PGASKA----A 61
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R D E ++ V FHH F + ++ I+ I +
Sbjct: 62 VDRWRADLEQALEGRFTDHPV-WPAFHHTVRRFGIPHEYFRQMIDGIQSDLEP------- 113
Query: 157 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
+ +E+ ++ YCY VA +VGL + +F G + + L+ G+ Q TNI+RD E
Sbjct: 114 RRLETFEELYLYCYRVASVVGLTIIHIF---GFDTRSALPLAEKCGVAFQLTNILRDIQE 170
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSA 276
D R++ P E ++ EDL+ + S + ++ + A + + L +
Sbjct: 171 D---AALGRIYIPAEDLRRFGVTEEDLRAGKRSPEFLELMRFEAARARTYYNESLPLLEL 227
Query: 277 LRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKM 313
+ + A+ I + + N +VF V++
Sbjct: 228 IHPRSRSSLWALISIYSRLLERIVSKNYDVFTRRVRL 264
>gi|433536769|ref|ZP_20493274.1| squalene synthase HpnD [Neisseria meningitidis 77221]
gi|432273705|gb|ELL28802.1| squalene synthase HpnD [Neisseria meningitidis 77221]
Length = 290
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQKKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ G D ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARIL---GFSDGKTLQYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|223936910|ref|ZP_03628819.1| squalene synthase HpnD [bacterium Ellin514]
gi|223894479|gb|EEF60931.1| squalene synthase HpnD [bacterium Ellin514]
Length = 289
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAF---- 97
++ K + + AL L R+ + Y R +D V DD S+PT + L A+
Sbjct: 6 TITQKSASNLALAFILLPKAKRDGMSALYAFCREVDDVADDESVPTPERRTRLSAWRTDI 65
Query: 98 HRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK 157
R ++ F +E + ++ Q H F EL KG + ++ K
Sbjct: 66 QRACNNQTPEFLV-NRELQPVIQQCHLAFGLFDELIKGVEMDLD--------------IK 110
Query: 158 EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLED 217
+ ++YCY VA +VGL ++F G +D A + +G LQ TNI+RD D
Sbjct: 111 RYPDYEALEQYCYRVASVVGLLSIEIF---GYQDKACRDYAIYLGKALQLTNILRDVRSD 167
Query: 218 INEIPKCRMFWPREIWSKY-VNKLEDLKYE 246
+ R++ P K+ V++ E L++E
Sbjct: 168 AE---RGRIYLPLSELKKFNVSEEEILRFE 194
>gi|385324167|ref|YP_005878606.1| phytoene synthase [Neisseria meningitidis 8013]
gi|261392554|emb|CAX50111.1| phytoene synthase [Neisseria meningitidis 8013]
Length = 290
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGTMPE-HPVNQALQQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCRRVAGVVGCLIARILGFSDGKTL---QYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|295702798|ref|YP_003595873.1| phytoene synthase [Bacillus megaterium DSM 319]
gi|294800457|gb|ADF37523.1| phytoene synthase [Bacillus megaterium DSM 319]
Length = 282
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C ++ + S++F L + R AV Y R +D + D+ P F R
Sbjct: 13 CEEIIKENSKTFYKAFSMLPSKQRKAVWAVYAFCRQVDDIVDEGCNPEIELQQFESEFAR 72
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+ S + + +Q+ AF ++ G +RM + KE
Sbjct: 73 FKNGELLNESAMWVALRNVFEQYEMNVQAFDDMITG---------QRMD-----LVKKEY 118
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
+++D+ Y Y+VA VGL L + + ++L +++ ++G+ +Q TNI+RD ED+
Sbjct: 119 DTLDEVKTYSYHVASTVGLMLLPILAPTTHKELEEEAI--ALGIAMQLTNILRDVGEDLE 176
Query: 220 EIPKCRMFWPREIWSKY 236
+ R++ P+++ + Y
Sbjct: 177 ---RGRIYLPKDLMNSY 190
>gi|72536085|gb|AAZ73150.1| phytoene synthase [Enterobacteriaceae bacterium DC413]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 48 SRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH 107
S+SFA + R +V + Y R D V DD + +VP + + + E
Sbjct: 18 SKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQQLGFPGEVPSAQTPQQRLANLERK 77
Query: 108 FS---CGTKEYKVLMDQFHHVSTAFLELGKGYQ-DAIEDITKRMGAGMAKFICKEVESID 163
G + ++ F V+ A ++ Y D +E M A++ E+
Sbjct: 78 TRQAYAGAQMHEPAFAAFQEVAIAH-DISPAYAFDHLEGFA--MDVRGARY-----ETFQ 129
Query: 164 DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPK 223
D YCY+VAG+VGL ++++ G D A + +GL Q TNI RD +ED + +
Sbjct: 130 DTLRYCYHVAGVVGLMMAQIM---GVRDEAVLDRACDLGLAFQLTNIARDIVEDAR-VGR 185
Query: 224 C 224
C
Sbjct: 186 C 186
>gi|296314271|ref|ZP_06864212.1| squalene synthase HpnD [Neisseria polysaccharea ATCC 43768]
gi|296839067|gb|EFH23005.1| squalene synthase HpnD [Neisseria polysaccharea ATCC 43768]
Length = 290
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFHFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGEMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVRAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDGKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMRRF 185
>gi|170017146|ref|YP_001728065.1| phytoene/squalene synthetase [Leuconostoc citreum KM20]
gi|169804003|gb|ACA82621.1| Phytoene/squalene synthetase [Leuconostoc citreum KM20]
Length = 295
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
E++ + + YCY VAG VG + + + + D ++ +G+ LQ TNIIRD+ ED+
Sbjct: 127 ETVQELEVYCYQVAGTVGCMIYTILSGKPIQMMKQDIIN--VGIALQLTNIIRDFHEDLL 184
Query: 220 E----IPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
IPK + + E+ S+ + LK E++ KA+Q L+D+
Sbjct: 185 AQRCFIPKSLLQFDAELSSEDIM----LKKEQDIKKALQQLSDI 224
>gi|149176078|ref|ZP_01854695.1| putative terpenoid synthase [Planctomyces maris DSM 8797]
gi|148845232|gb|EDL59578.1| putative terpenoid synthase [Planctomyces maris DSM 8797]
Length = 293
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 37/253 (14%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+A+C + + + +F L + A+C+ Y +R +D + D + + + L
Sbjct: 9 YAYCQQLAKQTAGNFYYSFLALRKEQFQAMCVLYAYMRTVDDLGDQSDLSLADRGDAL-- 66
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKF-- 154
++ RE H +VL DQ +T F A+ D+ +R F
Sbjct: 67 ---EIWRRELH--------QVLEDQTDPDATPFHPCFP----ALGDVIQRYRIPHDYFFA 111
Query: 155 ICKEVES---------IDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFL 205
+ VES + EYCY+VAG+VGL ++ G D + G+
Sbjct: 112 VITGVESDLQPVTFATFEQLKEYCYHVAGVVGLCCIHIW---GFHDERAFAAGVECGIAF 168
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK---YEENSDKAVQCLNDMVTN 262
Q TNI+RD EDI R++ P+E ++ D++ Y+E + +Q D +
Sbjct: 169 QLTNILRDLGEDIQ---MGRVYLPQEDLDRFGYARADIQSQIYDERFRELMQFEVDRARS 225
Query: 263 ALMHVEDCLKYMS 275
E Y+S
Sbjct: 226 YYQSSERLFDYLS 238
>gi|448306616|ref|ZP_21496520.1| phytoene synthase [Natronorubrum bangense JCM 10635]
gi|445597914|gb|ELY51986.1| phytoene synthase [Natronorubrum bangense JCM 10635]
Length = 316
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 22/207 (10%)
Query: 46 KVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTS-IPTDVKVPILIAFHRHVYDR 104
+ ++F L + L +R+A + Y R D V DD + +P D + L A R
Sbjct: 15 QTGKTFYLATRFLPKRVRHATHVLYAFFRIADEVVDDAAGVPPDEQRAELEAL------R 68
Query: 105 EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDD 164
E + VL AF EL + Y A +I + A + E+ DD
Sbjct: 69 EQALGNTDPDGPVL--------EAFTELRREYDIADAEIETFIDAMQSDIDTDRYETYDD 120
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
+ Y A VG+ ++ + E P ++ +G Q TN +RD EDI I +
Sbjct: 121 LETYMRGSAAAVGVMMTAIMDPKDRETALPHAV--KLGEAFQMTNFLRDVREDI--IERN 176
Query: 225 RMFWPREIWSKY---VNKLEDLKYEEN 248
R++ P++ + ++E LK+ E+
Sbjct: 177 RIYLPQKTLHAHGVSPEQIERLKHSES 203
>gi|421876988|ref|ZP_16308539.1| Phytoene/squalene synthetase [Leuconostoc citreum LBAE C10]
gi|372557119|emb|CCF24659.1| Phytoene/squalene synthetase [Leuconostoc citreum LBAE C10]
Length = 295
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
E++ + + YCY VAG VG + + + + D ++ +G+ LQ TNIIRD+ ED+
Sbjct: 127 ETVQELEVYCYQVAGTVGCMIYTILSGKPIQMMKQDIIN--VGIALQLTNIIRDFHEDLL 184
Query: 220 E----IPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDM 259
IPK + + E+ S+ + LK E++ KA+Q L+D+
Sbjct: 185 AQRCFIPKSLLQFDAELSSEDIM----LKKEQDIKKALQQLSDI 224
>gi|357409890|ref|YP_004921626.1| squalene synthase [Streptomyces flavogriseus ATCC 33331]
gi|320007259|gb|ADW02109.1| squalene synthase HpnD [Streptomyces flavogriseus ATCC 33331]
Length = 314
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKV 91
P + +++C ++ + +R+FA I+ L + R A+ Y R +D + D P
Sbjct: 11 PVQAAYSYCEAVTGQQARNFAYGIRLLPYEKRQAMSALYAFSRRVDDIGDGELDPE---- 66
Query: 92 PILIAFHRHVYDREWHFSCGT-KEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAG 150
+HV E G ++ V D V+ A + + + + + + +
Sbjct: 67 ------TKHVRLEETRGLLGRIRDGAVDEDDTDPVAVALADATRRFPLPLGGLDELIDGV 120
Query: 151 MAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDS-----LSNSMGLFL 205
+ E+ DD YC VAG +G +F GT+ AP + ++++GL L
Sbjct: 121 LMDVRGATYETWDDLKTYCRCVAGAIGRLSLGVF---GTQPGAPGAERAAEYADTLGLAL 177
Query: 206 QKTNIIRDYLEDINEIPKCRMFWPREIWSKY 236
Q TNI+RD ED R + P + +K+
Sbjct: 178 QLTNILRDVREDAG---NGRTYLPADDLAKF 205
>gi|385810501|ref|YP_005846897.1| phytoene synthase [Ignavibacterium album JCM 16511]
gi|383802549|gb|AFH49629.1| Phytoene synthase [Ignavibacterium album JCM 16511]
Length = 280
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 41/236 (17%)
Query: 26 QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI 85
++ KQI E +F Y+ F L+ + R+A+ Y R D + DD S+
Sbjct: 3 ESAKQISKESKSSFYYA--------FNLLPEHK----RDAMNTVYAFCRKTDDIVDDISV 50
Query: 86 PTDVKVPILIAFHRHVYDREWHFS-----CGTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
++K L R W G +Y +L +S + L D
Sbjct: 51 SDEIKYEKL---------RRWRIEFEKAFAGRSDYPLLNKLGKTISNFNIPL-----DPF 96
Query: 141 EDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNS 200
++ K M + K +S DD YCY VA VGL ++F G ++ + + +
Sbjct: 97 FELIKGMEMDLQK---NRYKSFDDLLLYCYRVASTVGLMCIEIF---GYKNPSTKDFAVN 150
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCL 256
+G+ LQ TNI+RD +D + R++ P+E K+ N E Y++ SD+ + L
Sbjct: 151 LGIALQLTNILRDLGKDAEQ---GRIYLPQEDLEKF-NYSETQLYQKISDENFKQL 202
>gi|385855225|ref|YP_005901738.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M01-240355]
gi|421542453|ref|ZP_15988560.1| squalene synthase HpnD [Neisseria meningitidis NM255]
gi|421561219|ref|ZP_16007067.1| squalene synthase HpnD [Neisseria meningitidis NM2657]
gi|421567491|ref|ZP_16013225.1| squalene synthase HpnD [Neisseria meningitidis NM3001]
gi|325204166|gb|ADY99619.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M01-240355]
gi|402317283|gb|EJU52821.1| squalene synthase HpnD [Neisseria meningitidis NM255]
gi|402338682|gb|EJU73912.1| squalene synthase HpnD [Neisseria meningitidis NM2657]
gi|402343524|gb|EJU78670.1| squalene synthase HpnD [Neisseria meningitidis NM3001]
Length = 290
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L + R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGAMPE-HPVNQALRQVKETFKLPKYELEALIDGMQMDLVRAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC VAG+VG ++++ S + L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCRRVAGVVGCLIARILGFSDGKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
+ R++ P E ++
Sbjct: 171 R---RGRIYLPMEEMQRF 185
>gi|435847252|ref|YP_007309502.1| phytoene/squalene synthetase [Natronococcus occultus SP4]
gi|433673520|gb|AGB37712.1| phytoene/squalene synthetase [Natronococcus occultus SP4]
Length = 316
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 46 KVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTS-IPTDVKVPILIAFHRHVYDR 104
+ ++F L + L +RNA + Y R D V DD + +P + L + R
Sbjct: 15 RTGKTFYLATRFLPKRVRNATHVLYAFFRIADEVVDDAADVPPSEQRAELASLRRQA--- 71
Query: 105 EWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDD 164
E VL AF EL Y A E+I + A + E+ D
Sbjct: 72 ---LGQAEPEDPVL--------EAFRELCDRYGIADEEIVTFLDAMESDIDTDRYETYAD 120
Query: 165 YDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKC 224
+ Y A VG+ ++ + E P ++ ++G Q TN +RD ED+ E +
Sbjct: 121 LEAYMRGSAASVGVMMTAIMEPENPETALPHAV--TLGEAFQMTNFLRDVREDVLE--RD 176
Query: 225 RMFWPREIWSKY---VNKLEDLKYEEN 248
R++ P+E + ++E L+Y E+
Sbjct: 177 RIYLPQETLRAHDVSEAEIETLEYSES 203
>gi|414159972|ref|ZP_11416244.1| hypothetical protein HMPREF9310_00618 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878909|gb|EKS26774.1| hypothetical protein HMPREF9310_00618 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 287
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 11/182 (6%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ + S++F+ L R AV Y V R +D D+ P ++ +
Sbjct: 9 YEYCRKIMEEYSKTFSYAFNSLPEQERKAVWAIYAVCRMIDDSIDEYEDPK--RLDAIRE 66
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
H+YD G E V + V AF K Y + M +
Sbjct: 67 DLEHIYD-------GDSE-NVNFNSNASVMRAFRHTLKSYPVPLHAFKTLMDYVESDLTM 118
Query: 157 KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
+E+ ++ D YCY VAG +G L+ + + A D + +G LQ TNI+RD E
Sbjct: 119 TALETDEELDAYCYGVAGTIGELLTPVLAYEQYYETA-DKVGIELGKALQITNILRDVGE 177
Query: 217 DI 218
D
Sbjct: 178 DF 179
>gi|349575174|ref|ZP_08887095.1| phytoene/squalene synthetase [Neisseria shayeganii 871]
gi|348013182|gb|EGY52105.1| phytoene/squalene synthetase [Neisseria shayeganii 871]
Length = 298
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 25/244 (10%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI-LI 95
+ +C SF + L D R A+ + Y R LD V DD S D V +
Sbjct: 19 YQYCEDKAAASGSSFLAGFRFLNADKRRAMTVLYAYCRELDDVADDCS---DAHVAAQTL 75
Query: 96 AFHRHVYDREWHFSCGTKEYKV---LMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
A+ R + +H + G E+ V L + EL D+ R A A
Sbjct: 76 AWWRQDLAKAFH-ADGVPEHPVHQALRMEAPKYGLPESELAAVIDGMEMDVQPRRYADFA 134
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
EYC+ VAG+VG ++++ G D A + ++ MGL LQ TNIIR
Sbjct: 135 ALA-----------EYCHCVAGVVGRLIARIL---GFRDPAVLAYADKMGLALQLTNIIR 180
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLK 272
D ED R++ P E ++ D+ + + + V A + ++
Sbjct: 181 DVGEDAA---MGRLYLPVEDLQRFKVPAADILQRRAGPQFAELMAFQVARARETYREAVR 237
Query: 273 YMSA 276
+ A
Sbjct: 238 LLPA 241
>gi|312112943|ref|YP_004010539.1| phytoene synthase [Rhodomicrobium vannielii ATCC 17100]
gi|311218072|gb|ADP69440.1| Phytoene synthase [Rhodomicrobium vannielii ATCC 17100]
Length = 324
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
+P A + ++ K S+SFA+ + L D R + Y R D V DD
Sbjct: 2 DPIIALSHELIEKGSKSFAMAAKLLPRDARYDSMMLYAWCRHCDDVIDDQ---------- 51
Query: 94 LIAFHRHVYDREWHFSC--GTKEYKVLMDQFHHVSTAFLELGK-GYQDAI-EDITKRMGA 149
++ F+R + G + F+ LG+ ++ I E +
Sbjct: 52 ILGFNRETGSEKSPQERLEGLRRDTAAALAGTATEPVFVALGRVAHKHHIPERHPMELLR 111
Query: 150 GMAKFICKEV-ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKT 208
G + + V E+++D +YCY+VAG+VG+ ++ + G + + ++ +G+ Q T
Sbjct: 112 GFEMDVNERVYETLEDTLDYCYHVAGVVGVMMAMIM---GVRERPTLNRASDLGIAFQLT 168
Query: 209 NIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242
NI RD +ED R++ PR+ W + ED
Sbjct: 169 NICRDVVEDAK---AGRLYLPRQ-WLREAGVPED 198
>gi|172056775|ref|YP_001813235.1| squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
gi|171989296|gb|ACB60218.1| Squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
Length = 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C + S++F L R AV Y R LD D+++ P + L F
Sbjct: 11 CEQTIQGGSKTFYKAFSLLPKQDRMAVYAIYTFCRHLDDTVDESATPKESLAEFLEEFR- 69
Query: 100 HVYDREWHFSCGTKEYK----VLMDQFHHVS---TAFLELGKGYQDAIEDITKRMGAGMA 152
F G K L D F T FLEL +G + IE
Sbjct: 70 -------LFRSGNSINKPLWIALADVFKRYEMDETPFLELAEGMRWDIEK---------- 112
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
S+++ ++Y YYVA VGL L + A DL ++ +G+ +Q TNI+R
Sbjct: 113 ----NRYHSLEETEKYSYYVASTVGLMLLPIL-APKQNDLRESAI--QLGIAMQLTNILR 165
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLEDL 243
D ED + R++ P++ +Y E L
Sbjct: 166 DVGEDAK---RGRIYLPKDWMDQYGVTTESL 193
>gi|357402506|ref|YP_004914431.1| phytoene synthase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337768915|emb|CCB77628.1| putative phytoene synthase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 313
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ + +R+FA I+ L T R A+ Y R +D + D P A
Sbjct: 19 YRYCETVTGQQARNFAYGIRLLPTGKRQAMSALYAFSRRVDDIGDGDLDP---------A 69
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R R + +V D V+ A + + + ++ + + + +
Sbjct: 70 AKRDRLTRTRDVLARVRAGEVGDDDTDPVALALADAARRFPLPLDGLDELIDGVLMDVRG 129
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGL-SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ E+ DD +YC VAG +G LG+ + A GTE A ++++GL LQ TNI+R
Sbjct: 130 ETYETWDDLKDYCRCVAGAIGRLSLGVFGTVPGAVGTERAA--EYADTLGLALQLTNILR 187
Query: 213 DYLEDINEIPKCRMFWPREIWSKY 236
D ED R + P E +K+
Sbjct: 188 DVREDAG---NGRTYLPAEDLAKF 208
>gi|194336790|ref|YP_002018584.1| squalene/phytoene synthase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309267|gb|ACF43967.1| Squalene/phytoene synthase [Pelodictyon phaeoclathratiforme BU-1]
Length = 310
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 20/263 (7%)
Query: 26 QAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSI 85
+ EK I E +++C + +++F L L + + Y +LR +D V D +
Sbjct: 13 KTEKLITLEDAYSYCRQISQHHAKTFYLASMFLPKKQQKPIFAIYALLRTVDDVVDMAEV 72
Query: 86 PTDVKVPILIAFHRHVYDREWH---FSC--GTKEYKVLMDQFHHVSTAFLELGKGYQDAI 140
+ + R + EW +C G +M +H K Y I
Sbjct: 73 KLNNGLITSEEIQRIL--EEWKSKLTACYGGKTGNDPIMIAWHDTL-------KSYSIPI 123
Query: 141 EDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNS 200
E M K E+ DD YCY VA +VGL S++F G D +
Sbjct: 124 ELPLDLMDGVAMDIEFKPFETFDDLYVYCYKVAAVVGLMTSEIF---GYSDKRALEHAIE 180
Query: 201 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 260
+G+ +Q TNI+RD ED++ + R++ P E ++ E++ ++ +D + + +
Sbjct: 181 LGIAMQLTNILRDIGEDVD---RGRIYLPLEDLRRFNYSKEEMMQKKINDNFLNLMKFQI 237
Query: 261 TNALMHVEDCLKYMSALRDHAIF 283
A + K + L + F
Sbjct: 238 ERARGYYRSSDKGIPMLEKESRF 260
>gi|339444041|ref|YP_004710045.1| phytoene/squalene synthetase [Eggerthella sp. YY7918]
gi|338903793|dbj|BAK43644.1| phytoene/squalene synthetase [Eggerthella sp. YY7918]
Length = 293
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Query: 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPI 93
E +A+C ++ + S SF QL + R +V Y R D S+ + +
Sbjct: 12 EQDFAWCERVIKRNSPSFYRAFSQLPDEKRRSVYAIYAFCRLADD-----SVDREANRAM 66
Query: 94 LIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAK 153
L D F G K L V F + + D +E + +
Sbjct: 67 LDGLQ----DELEQFLAGCTPDKPLWRALDVVFGRFDMEARPFFDMVEGQRRDLD----- 117
Query: 154 FICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRD 213
+ ++++ +EY YYVAG VGL L L + S D + + ++G+ +Q TNI+RD
Sbjct: 118 --FHQPRTMEELEEYSYYVAGSVGLMLLPLLHTSSRADESLRASGIALGVAMQLTNILRD 175
Query: 214 YLEDIN 219
ED++
Sbjct: 176 VGEDLD 181
>gi|385328422|ref|YP_005882725.1| putative poly-isoprenyl transferase [Neisseria meningitidis
alpha710]
gi|385338019|ref|YP_005891892.1| phytoene synthase [Neisseria meningitidis WUE 2594]
gi|416187824|ref|ZP_11614436.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M0579]
gi|421550651|ref|ZP_15996652.1| squalene synthase HpnD [Neisseria meningitidis 69166]
gi|433471393|ref|ZP_20428779.1| squalene synthase HpnD [Neisseria meningitidis 68094]
gi|433475687|ref|ZP_20433025.1| squalene synthase HpnD [Neisseria meningitidis 88050]
gi|433513472|ref|ZP_20470263.1| squalene synthase HpnD [Neisseria meningitidis 63049]
gi|433517538|ref|ZP_20474284.1| squalene synthase HpnD [Neisseria meningitidis 96023]
gi|433524197|ref|ZP_20480858.1| squalene synthase HpnD [Neisseria meningitidis 97020]
gi|433526349|ref|ZP_20482979.1| squalene synthase HpnD [Neisseria meningitidis 69096]
gi|433528220|ref|ZP_20484829.1| squalene synthase HpnD [Neisseria meningitidis NM3652]
gi|433530419|ref|ZP_20487008.1| squalene synthase HpnD [Neisseria meningitidis NM3642]
gi|433532647|ref|ZP_20489212.1| squalene synthase HpnD [Neisseria meningitidis 2007056]
gi|433534463|ref|ZP_20491005.1| squalene synthase HpnD [Neisseria meningitidis 2001212]
gi|433538936|ref|ZP_20495412.1| squalene synthase HpnD [Neisseria meningitidis 70030]
gi|308389275|gb|ADO31595.1| putative poly-isoprenyl transferase [Neisseria meningitidis
alpha710]
gi|319410433|emb|CBY90792.1| phytoene synthase [Neisseria meningitidis WUE 2594]
gi|325136333|gb|EGC58941.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
M0579]
gi|402329188|gb|EJU64549.1| squalene synthase HpnD [Neisseria meningitidis 69166]
gi|432208245|gb|ELK64223.1| squalene synthase HpnD [Neisseria meningitidis 68094]
gi|432209339|gb|ELK65307.1| squalene synthase HpnD [Neisseria meningitidis 88050]
gi|432248036|gb|ELL03470.1| squalene synthase HpnD [Neisseria meningitidis 63049]
gi|432253274|gb|ELL08618.1| squalene synthase HpnD [Neisseria meningitidis 96023]
gi|432259441|gb|ELL14712.1| squalene synthase HpnD [Neisseria meningitidis 97020]
gi|432261113|gb|ELL16370.1| squalene synthase HpnD [Neisseria meningitidis 69096]
gi|432265021|gb|ELL20217.1| squalene synthase HpnD [Neisseria meningitidis NM3652]
gi|432266926|gb|ELL22107.1| squalene synthase HpnD [Neisseria meningitidis NM3642]
gi|432267754|gb|ELL22929.1| squalene synthase HpnD [Neisseria meningitidis 2007056]
gi|432272064|gb|ELL27181.1| squalene synthase HpnD [Neisseria meningitidis 2001212]
gi|432273298|gb|ELL28396.1| squalene synthase HpnD [Neisseria meningitidis 70030]
Length = 290
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + SF + L R+AV + Y R LD V D+ S P DV L
Sbjct: 6 YCRQKAEESRSSFLSGFRFLTQKKRDAVTVLYAFCRELDDVVDECSNP-DVAQATL---- 60
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
W K + M + H V+ A ++ + ++ ++ + +
Sbjct: 61 ------NWWRGDLDKVFGGEMPE-HPVNQALQQVKETFKLPKYELEALIDGMQMDLVQAR 113
Query: 159 VESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDI 218
S ++ YC+ VAG+VG ++++ S ++ L ++ MGL LQ TNIIRD ED
Sbjct: 114 YGSFEELKLYCHRVAGVVGCLIARILGFSDSKTL---EYADKMGLALQLTNIIRDVGEDA 170
Query: 219 NEIPKCRMFWPREIWSKY 236
R++ P E ++
Sbjct: 171 R---NGRIYLPMEEMRRF 185
>gi|386358582|ref|YP_006056828.1| squalene/phytoene synthase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365809090|gb|AEW97306.1| putative squalene/phytoene synthase [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 37 WAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96
+ +C ++ + +R+FA I+ L T R A+ Y R +D + D P A
Sbjct: 15 YRYCETVTGQQARNFAYGIRLLPTGKRQAMSALYAFSRRVDDIGDGDLDP---------A 65
Query: 97 FHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC 156
R R + +V D V+ A + + + ++ + + + +
Sbjct: 66 AKRDRLTRTRDVLARVRAGEVGDDDTDPVALALADAARRFPLPLDGLDELIDGVLMDVRG 125
Query: 157 KEVESIDDYDEYCYYVAGLVG---LGL-SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+ E+ DD +YC VAG +G LG+ + A GTE A ++++GL LQ TNI+R
Sbjct: 126 ETYETWDDLKDYCRCVAGAIGRLSLGVFGTVPGAVGTERAA--EYADTLGLALQLTNILR 183
Query: 213 DYLEDINEIPKCRMFWPREIWSKY 236
D ED R + P E +K+
Sbjct: 184 DVREDAG---NGRTYLPAEDLAKF 204
>gi|110598630|ref|ZP_01386896.1| Squalene/phytoene synthase [Chlorobium ferrooxidans DSM 13031]
gi|110339742|gb|EAT58251.1| Squalene/phytoene synthase [Chlorobium ferrooxidans DSM 13031]
Length = 310
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 119/291 (40%), Gaps = 33/291 (11%)
Query: 21 KMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVE 80
K A + EK+I E + +C + +++F L L +N + Y +LR +D +
Sbjct: 8 KTAIKDPEKRITLENAYQYCRQISQHHAKTFYLATLFLPKRQQNPIFAIYALLRTVDDLV 67
Query: 81 D-------DTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELG 133
D + I + +L + + + ++ + +LM A+ +
Sbjct: 68 DMAEEKLTNGQITKEEIQRLLEGWKSRL---KACYAGESVNDPILM--------AWQDTL 116
Query: 134 KGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLA 193
K + IE M + K E+ D+ YCY VA +VGL S++F G D
Sbjct: 117 KSFPIPIEYPLDLMDGVAMDIVFKPFETFDELYVYCYKVASVVGLMTSEIF---GYRDKQ 173
Query: 194 PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAV 253
+ +G+ +Q TNI+RD ED++ + R++ P E ++ E+ + N++
Sbjct: 174 ALQHAIELGIAMQLTNILRDVGEDVD---RGRIYLPLEDLRRFNYSEEEFMKKTNNENFR 230
Query: 254 QCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNI 304
+ + A + K + L + F A+G ++ Y NI
Sbjct: 231 NLIKFQIERARGYYRSSEKGIPMLEKRSRF---------AVGISSINYCNI 272
>gi|294497424|ref|YP_003561124.1| phytoene synthase [Bacillus megaterium QM B1551]
gi|294347361|gb|ADE67690.1| phytoene synthase [Bacillus megaterium QM B1551]
Length = 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 40 CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHR 99
C ++ + S++F L + R AV Y R +D + D+ P F R
Sbjct: 13 CEEIIKENSKTFYKAFSMLPSKQRKAVWAVYAFCRQVDDIVDEGCNPGIELQQFESEFAR 72
Query: 100 HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEV 159
+ S + + +Q+ AF ++ G +RM + KE
Sbjct: 73 FKNGELLNESAMWVALRNVFEQYEMNVQAFDDMITG---------QRMD-----LVKKEY 118
Query: 160 ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 219
+++D+ Y Y+VA VGL L + + ++L +++ ++G+ +Q TNI+RD ED+
Sbjct: 119 DTLDEVKTYSYHVASTVGLMLLPILAPTTHKELEEEAV--ALGIAMQLTNILRDVGEDLE 176
Query: 220 EIPKCRMFWPREIWSKY 236
+ R++ P+++ + Y
Sbjct: 177 ---RGRIYLPKDLMNSY 190
>gi|37528171|ref|NP_931516.1| phytoene synthase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36787608|emb|CAE16715.1| phytoene synthase [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 308
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Query: 43 MLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDV----------KVP 92
++ + S+SFA V + T R++ + Y R D + D + + K+
Sbjct: 12 IMEQGSKSFASVTRLFDTATRHSTMMLYAWCRYCDDIIDGQELGRQISSVDKYSAREKLQ 71
Query: 93 ILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMA 152
+L + YD + F T L Q A E + G M
Sbjct: 72 MLQYLTKQAYD----------GLPMTEPAFAAFQTVALSNEIPQQQAFEHLE---GFAM- 117
Query: 153 KFICKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIR 212
+C+ ++DD YCY+VAG+VGL ++++ G + + + +G+ Q TNI R
Sbjct: 118 DVLCEPYRTLDDTLRYCYHVAGVVGLMMARVM---GVREASVLDRACDLGIAFQLTNIAR 174
Query: 213 DYLEDINEIPKCRMFWPREIWSKYVNKLED-LKYEENSDKAVQCLNDMVTNA 263
D +ED R + P E W + D L Y EN + + ++ A
Sbjct: 175 DIIEDAK---AGRCYLPLE-WLHQEGLMPDTLIYTENRPALARVASRLIVEA 222
>gi|333900584|ref|YP_004474457.1| phytoene synthase [Pseudomonas fulva 12-X]
gi|333115849|gb|AEF22363.1| Phytoene synthase [Pseudomonas fulva 12-X]
Length = 332
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 161 SIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE 220
SIDD EYCY+VAG+VGL ++++ G D A + +GL Q TNI RD ++D
Sbjct: 131 SIDDTLEYCYHVAGVVGLMMARVM---GARDEATLDRACDLGLAFQLTNIARDIIDDAT- 186
Query: 221 IPKC 224
+ +C
Sbjct: 187 VGRC 190
>gi|294670707|ref|ZP_06735582.1| hypothetical protein NEIELOOT_02429 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307595|gb|EFE48838.1| hypothetical protein NEIELOOT_02429 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 272
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 31/256 (12%)
Query: 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFH 98
+C + + K SF + L + +NA+ Y R LD V DD + D +V +
Sbjct: 6 YCRNKVSKSGSSFVSGFRFLPQNRQNALIALYAFCRELDDVVDDCA---DKQVAAM-GLQ 61
Query: 99 RHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE 158
D FS G E+ V H V L Q +E+I + M + ++
Sbjct: 62 WWRGDLAKVFSDGLPEHPVNQTLKHIVIEFSLP-----QAELEEIIEGM-----QMDLRQ 111
Query: 159 VESID--DYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 216
V D + YCY VAG+VG ++++ + L + GL LQ TNIIRD E
Sbjct: 112 VRYADFAELSVYCYRVAGVVGRLIARILGFDNEQTLL---YAEKQGLALQLTNIIRDVGE 168
Query: 217 DINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNA---------LMHV 267
D R++ P++ ++ + + E+S + ++ +N T A L+
Sbjct: 169 DAR---MGRIYLPQDELERFGIAEQAVLRAESSAEFIEFMNFQYTRAQNLYREARDLLPD 225
Query: 268 EDCLKYMSALRDHAIF 283
EDC + + L AI+
Sbjct: 226 EDCRRQKAGLIMAAIY 241
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,735,029,383
Number of Sequences: 23463169
Number of extensions: 230448956
Number of successful extensions: 675252
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 902
Number of HSP's that attempted gapping in prelim test: 671655
Number of HSP's gapped (non-prelim): 1967
length of query: 384
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 240
effective length of database: 8,980,499,031
effective search space: 2155319767440
effective search space used: 2155319767440
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 78 (34.7 bits)