Citrus Sinensis ID: 016724

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYRDGMGE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHcEEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHccccHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHcccEEEccccccccccccccccccccHccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEccccEEccccccHHHEHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
migtnfmdeidcgsffdhiddlldfpnedveaglpnadsnsfpsiwptqsdslpgsdsvfsnsstdlstqlsvpyediVQLEWLSNfvedsfsggsltmskqesstitkddsshnqfqtsspvsvlesssscsgektvlgspettapgrrgrarskrprpatfnprppvqlvsptssvtetqpqhrliapkassdsenfaESRLVikipkqfnpehkkkkkiklsvpkvsdetsevgptqavrkcmhceitktpqwragpmgpktlcnacgvryksgrlfpeyrpaasptfvpslhsnsHKKVVEMRNKncqkpivagtetmmtdapelipnnntlhwstfegsrrlreQHSLTGISLFRSLLFAYCYFISLFICFLYRDGMGE
Flexible Loop (DISEMBL)
MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESStitkddsshnqFQTSspvsvlesssscsgektvlgspettapgrrgrarskrprpatfnprppvqlvsptssvtetqpqhrliapkassdsenFAESRLVIkipkqfnpehkkkkkiklsvpkvsdetsevgptqavrkCMHCEITktpqwragpmgpKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYRDGMGE
Low Complexity Region (SEG)
MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQTsspvsvlesssscsGEKTVLGSPETTapgrrgrarskrprpaTFNPRPPVQLVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHkkkkkikLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYRDGMGE
Disordered region (IsUnstruct)
*****FMDEIDCGSFFDHIDDLLDFP********************************************LSVPYEDIVQLEWLSNFVE********************************************************************************************************************************************************VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYR******************************IV***********ELIPNNNTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYR*****
Disordered Region (DISOPRED)
****NFM*EIDCGSFFDHIDDLLDFPNEDVE**********************************************************************************************************************************************************************************************************************MHCEITKTPQWRAGPMGPKTLCNACGVR****************************************************************************************LLFAYCYFISLFICFLYRDGM**
Disordered Region (DISEMBL)
MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGG*****************************************************************ATFNPRPPVQLV**************************FAESRLVIKIPKQFNP************************TQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYRDGMGE
Disordered Region (DISPRO)
********EIDCGSFFDHIDDLLDFPN****************************************STQLSVPYEDIVQLEWLSNFVEDSFSGG**************************************************************************************************************************************************VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLH********E****************************NTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYRDG***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNTLHWSTFEGSRRLREQHSLTGISLFRSLLFAYCYFISLFICFLYRDGMGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	384	2.2.26 [Sep-21-2011]
Q9SV30	322	GATA transcription factor	yes	no	0.768	0.916	0.440	3e-60
O82632	308	GATA transcription factor	no	no	0.627	0.782	0.370	3e-37
Q6DBP8	303	GATA transcription factor	no	no	0.674	0.854	0.366	6e-36
Q9FH57	339	GATA transcription factor	no	no	0.606	0.687	0.387	5e-34
Q8VZP4	308	GATA transcription factor	no	no	0.677	0.844	0.372	6e-33
P69781	331	GATA transcription factor	no	no	0.559	0.649	0.382	4e-30
O49741	264	GATA transcription factor	no	no	0.445	0.647	0.352	6e-29
Q8LAU9	274	GATA transcription factor	no	no	0.174	0.244	0.791	2e-27
Q9SD38	312	GATA transcription factor	no	no	0.174	0.214	0.761	9e-27
O49743	240	GATA transcription factor	no	no	0.182	0.291	0.698	4e-26

>sp|Q9SV30|GATA8_ARATH GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2 SV=1

 Score =  232 bits (592), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/354 (44%), Positives = 197/354 (55%), Gaps = 59/354 (16%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPG-SDSV 59
           MIGT+F +++DCG+FFD++DDL+DFP  D++ G    DS+SFP+IW T  D+ P  SD +
Sbjct: 1   MIGTSFPEDLDCGNFFDNMDDLMDFPGGDIDVGFGIGDSDSFPTIWTTHHDTWPAASDPL 60

Query: 60  FS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQ 118
           FS N+++D S +L VP+EDIV++E   +FVE++       + K+E S  T  DSS +  Q
Sbjct: 61  FSSNTNSDSSPELYVPFEDIVKVERPPSFVEETL------VEKKEDSFSTNTDSSSSHSQ 114

Query: 119 TSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSSV 178
             S   V    SS S       +     PG+ GR R+                       
Sbjct: 115 FRSSSPVSVLESS-SSSSQTTNTTSLVLPGKHGRPRT-------------------KRPR 154

Query: 179 TETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKK-----------------KKK 221
              Q + R+       D+    +SRL+I+IPKQF  +H K                    
Sbjct: 155 PPVQDKDRV------KDNVCGGDSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSG 208

Query: 222 IKLSVP--KVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRL 279
           I L V    V   +SE  P   +RKCMHCE+TKTPQWR GPMGPKTLCNACGVRYKSGRL
Sbjct: 209 IDLEVNGNNVDSYSSEQYP---LRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRL 265

Query: 280 FPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNN 333
           FPEYRPAASPTF P+LHSNSHKKV EMRNK C         T   D   LIPNN
Sbjct: 266 FPEYRPAASPTFTPALHSNSHKKVAEMRNKRCSD---GSYITEENDLQGLIPNN 316

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.
Arabidopsis thaliana (taxid: 3702)

>sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/294 (37%), Positives = 156/294 (53%), Gaps = 53/294 (18%)

Query: 19  IDDLLDFPNED--VEAGLPNA-DSNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPY 75
           +DDLLDF N+D  V+ GL    DS++  +   T S +   S S+F++ +    + L +P 
Sbjct: 20  VDDLLDFSNDDGEVDDGLNTLPDSSTLSTGTLTDSSN---SSSLFTDGTG--FSDLYIPN 74

Query: 76  EDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQTSSPVSVLESSSSCSGE 135
           +DI +LEWLSNFVE+SF+G              +D    + F               SG 
Sbjct: 75  DDIAELEWLSNFVEESFAG--------------EDQDKLHLF---------------SG- 104

Query: 136 KTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSSVTETQPQHRLIAPKASSD 195
              L +P+TT     G   +   +P    P    Q +    S      + R  + ++ S 
Sbjct: 105 ---LKNPQTT-----GSTLTHLIKP---EPELDHQFIDIDESNVAVPAKAR--SKRSRSA 151

Query: 196 SENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQ 255
           +  +A   L +    + NP+ KK++++K       D   + G +   R+C+HC   KTPQ
Sbjct: 152 ASTWASRLLSLADSDETNPK-KKQRRVK-EQDFAGDMDVDCGESGGGRRCLHCATEKTPQ 209

Query: 256 WRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 309
           WR GPMGPKTLCNACGVRYKSGRL PEYRPA+SPTFV + HSNSH+KV+E+R +
Sbjct: 210 WRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQ 263

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1

 Score =  151 bits (382), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 157/308 (50%), Gaps = 49/308 (15%)

Query: 13  GSFFDHIDDLLDFPNEDVEAGLPNAD-SNSFPSIWPTQSDSLPGSDSVFSNSSTDLSTQL 71
           G FFD + + LD P +D++      D  + F  + P   D  P   S  ++  + ++   
Sbjct: 19  GDFFDDLINHLDVPLDDIDTTNGEGDWVDRFQDLEPPPMDMFPTLPSDLTSCGSGMA--- 75

Query: 72  SVPYEDIVQLEWLSNF--VEDSFSGGSLTMSKQESSTITKDDSSHNQFQTSSPVSVLESS 129
             P  DI +     N   ++ S+S  +L+ +  +SS   +   S   FQ+ SPVSVLE+S
Sbjct: 76  KAPRVDIQR-----NIPALKQSYSSEALSSTLHQSSAPPEIKVS-KLFQSLSPVSVLENS 129

Query: 130 SSCSGEKTVLGSPETTAPGRRGRA------RSKRPRPATFNPRPPVQLVSPTSSVTETQP 183
                     GS  T   G +  A      RSKR RP T             S +  ++P
Sbjct: 130 ---------YGSLSTHNNGSQRLAFPVKGMRSKRKRPTTLR----------LSYLFPSEP 170

Query: 184 QHRLIAPKASSDSENFAESRLVIKIPKQFNPEH-KKKKKIKLSVPKVSDETSEVGPTQAV 242
           +    +     +SE +  S            +H KKK+KI L+   VS           V
Sbjct: 171 RKPEKSTPGKPESECYFSSE-----------QHAKKKRKIHLTTRTVSSTLEASNSDGIV 219

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKK 302
           RKC HCE TKTPQWR GP GPKTLCNACGVR++SGRL PEYRPA+SPTF+P++HSNSH+K
Sbjct: 220 RKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRK 279

Query: 303 VVEMRNKN 310
           ++EMR K+
Sbjct: 280 IIEMRRKD 287

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FH57|GATA5_ARATH GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1

 Score =  145 bits (366), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/271 (38%), Positives = 139/271 (51%), Gaps = 38/271 (14%)

Query: 68  STQLSVPYEDIVQLEWLSNFVEDSF---SGGSLTMSKQESSTITKDDSSHNQFQTSSPVS 124
           +++LS+P +D+  LEWLS+FVEDSF   SG +LT +  E       D  H       PV+
Sbjct: 100 TSELSLPADDLANLEWLSHFVEDSFTEYSGPNLTGTPTEKPAWLTGDRKH-------PVT 152

Query: 125 VLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSSVTETQPQ 184
            +        E+T   SP    P +   ARSKR R               +SS +     
Sbjct: 153 AVT-------EETCFKSP---VPAK---ARSKRNRNGL------KVWSLGSSSSSGPSSS 193

Query: 185 HRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPTQAVRK 244
               +  +   S  F+ + L+  +     P   KK K + +    S E  ++ P    RK
Sbjct: 194 GSTSSSSSGPSSPWFSGAELLEPVVTSERPPFPKKHKKRSAESVFSGELQQLQPQ---RK 250

Query: 245 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVV 304
           C HC + KTPQWRAGPMG KTLCNACGVRYKSGRL PEYRPA SPTF   LHSN H+KV+
Sbjct: 251 CSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVI 310

Query: 305 EMRNKNCQKPIVAGTET---MMTDAPELIPN 332
           EMR K   K   +  ET    +  +P+ +P+
Sbjct: 311 EMRRK---KEPTSDNETGLNQLVQSPQAVPS 338

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1

 Score =  142 bits (357), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 148/311 (47%), Gaps = 51/311 (16%)

Query: 10  IDCGSFFDHIDDLLDFPNEDVEAGLPNAD-SNSFPSIWPTQSDSLPGSDSVFSNSSTDLS 68
           I  G FFD + + LD P ED+++     D    F  + P   D  P   S  + S    +
Sbjct: 16  ILSGDFFDGLTNHLDCPLEDIDSTNGEGDWVARFQDLEPPPLDMFPALPSDLT-SCPKGA 74

Query: 69  TQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQTSSPVSVLES 128
            ++ +P   I  L+   +   ++ SG     S    S+   D      FQ+ +PVSVLE+
Sbjct: 75  ARVRIPNNMIPALK--QSCSSEALSG---INSTPHQSSAPPDIKVSYLFQSLTPVSVLEN 129

Query: 129 S-SSCSGEKTVLGSPETTAPGRRGRARSKRPRPAT--------FNPRPPVQLVSPTSSVT 179
           S  S S + +  GS     P +    RSKR RP T        F PR      +P  SVT
Sbjct: 130 SYGSLSTQNS--GSQRLAFPVKG--MRSKRRRPTTVRLSYLFPFEPRK----STPGESVT 181

Query: 180 ETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPT 239
           E               SE  A                KKK+KI L     S         
Sbjct: 182 E-----------GYYSSEQHA----------------KKKRKIHLITHTESSTLESSKSD 214

Query: 240 QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNS 299
             VR C HCE   TPQWR GP GPKTLCNACGVR+KSGRL PEYRPA+SPTF+PS+HSNS
Sbjct: 215 GIVRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNS 274

Query: 300 HKKVVEMRNKN 310
           H+K++EMR K+
Sbjct: 275 HRKIIEMRKKD 285

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|P69781|GAT12_ARATH GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1

 Score =  132 bits (333), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 129/251 (51%), Gaps = 36/251 (14%)

Query: 65  TDLSTQLSVPYEDIV-QLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQFQTSSPV 123
           T  S  L +P +D+  +LEWLSN V++S S   +   +  S   ++ D   +   T SP 
Sbjct: 65  TSFSGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSD---TGSPE 121

Query: 124 SVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLV-----SPTSSV 178
           +   SS   + + +V             +ARSKR R A  N      L      SP +  
Sbjct: 122 NPNSSSPIFTTDVSV-----------PAKARSKRSRAAACNWASRGLLKETFYDSPFTGE 170

Query: 179 TETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGP 238
           T    Q  L  P +           L+  + K+   +   ++K  +S P       E G 
Sbjct: 171 TILSSQQHLSPPTSPP--------LLMAPLGKKQAVDGGHRRKKDVSSP-------ESGG 215

Query: 239 TQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSN 298
            +  R+C+HC   KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPAASPTFV + HSN
Sbjct: 216 AEE-RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSN 274

Query: 299 SHKKVVEMRNK 309
           SH+KV+E+R +
Sbjct: 275 SHRKVMELRRQ 285

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1

 Score =  128 bits (322), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 111/247 (44%), Gaps = 76/247 (30%)

Query: 71  LSVPYEDIVQLEWLSNFVEDSFS-------GGSLTMSKQESSTITKDDSSHNQFQTSSPV 123
           + VP +D   LEWLS FV+DSF+       GG++T  K E               TS P 
Sbjct: 69  ICVPSDDAAHLEWLSQFVDDSFADFPANPLGGTMTSVKTE---------------TSFP- 112

Query: 124 SVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSSVTETQP 183
                                      G+ RSKR R     P P     SP    +E Q 
Sbjct: 113 ---------------------------GKPRSKRSR----APAPFAGTWSPMPLESEHQQ 141

Query: 184 QHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPTQAVR 243
            H                         +F P+ ++         +    +SE      +R
Sbjct: 142 LHSAA----------------------KFKPKKEQSGGGGGGGGRHQSSSSETTEGGGMR 179

Query: 244 KCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKV 303
           +C HC   KTPQWR GP+GPKTLCNACGVR+KSGRL PEYRPA+SPTFV + HSNSH+KV
Sbjct: 180 RCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKV 239

Query: 304 VEMRNKN 310
           +E+R + 
Sbjct: 240 MELRRQK 246

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 56/67 (83%)

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKK 302
           RKC HC   KTPQWRAGP GPKTLCNACGVRYKSGRL PEYRPA SPTF   LHSNSH+K
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253

Query: 303 VVEMRNK 309
           +VEMR +
Sbjct: 254 IVEMRKQ 260

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SD38|GATA6_ARATH GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1

 Score =  121 bits (304), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 55/67 (82%)

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKK 302
           R+C HC + KTPQWRAGP+G KTLCNACGVRYKSGRL PEYRPA SPTF   LHSN H K
Sbjct: 221 RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSK 280

Query: 303 VVEMRNK 309
           V+EMR K
Sbjct: 281 VIEMRRK 287

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1

 Score =  119 bits (298), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 60/73 (82%)

Query: 241 AVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSH 300
             R+C HC   KTPQWR GP+GPKTLCNACGVRYKSGRL PEYRPA+SPTFV + HSNSH
Sbjct: 156 GARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSH 215

Query: 301 KKVVEMRNKNCQK 313
           +KV+E+R +  Q+
Sbjct: 216 RKVMELRRQKEQQ 228

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
255586867	359	GATA transcription factor, putative [Ric	0.872	0.933	0.732	1e-124
224097884	354	predicted protein [Populus trichocarpa]	0.838	0.909	0.690	1e-115
224113043	325	predicted protein [Populus trichocarpa]	0.770	0.910	0.642	1e-111
356502307	333	PREDICTED: GATA transcription factor 9-l	0.838	0.966	0.643	1e-110
225449036	340	PREDICTED: GATA transcription factor 9-l	0.841	0.95	0.709	1e-110
449449346	355	PREDICTED: GATA transcription factor 9-l	0.854	0.923	0.659	1e-107
356535635	347	PREDICTED: GATA transcription factor 9-l	0.861	0.953	0.677	1e-106
356559571	333	PREDICTED: GATA transcription factor 9-l	0.841	0.969	0.644	1e-104
356576225	348	PREDICTED: GATA transcription factor 9-l	0.861	0.951	0.675	1e-102
37572443	343	AG-motif binding protein-1 [Nicotiana ta	0.768	0.860	0.640	1e-92

>gi|255586867|ref|XP_002534043.1| GATA transcription factor, putative [Ricinus communis] gi|223525941|gb|EEF28339.1| GATA transcription factor, putative [Ricinus communis]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/355 (73%), Positives = 292/355 (82%), Gaps = 20/355 (5%)

Query: 1   MIG-TNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNA--------DSNSFPSIWPTQSD 51
           MIG TNF+DEIDCGSFFDHIDDLLDFP +D+++ LP+         + NSFPSIW TQSD
Sbjct: 1   MIGPTNFIDEIDCGSFFDHIDDLLDFPTDDIDSCLPDCTNAVNVNGNVNSFPSIWSTQSD 60

Query: 52  SLPGSDSVFSNSST-----DLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESST 106
           SLPGS SVFS+++      DLS +LSVPYEDIVQLEWLSNFVEDSFSGGSLTM+K+ES++
Sbjct: 61  SLPGSHSVFSSNTNNNSASDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMNKEESTS 120

Query: 107 ITKDDSSHNQFQTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPR 166
           I KD S H+QFQTSSPVSVLESSSSCSGEKTV  SPE  A GRRGRARSKRPRPATF PR
Sbjct: 121 INKDSSHHHQFQTSSPVSVLESSSSCSGEKTVPRSPEIIASGRRGRARSKRPRPATFTPR 180

Query: 167 PPVQLVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIP-KQFNPEHKKKKKIKLS 225
           P +QL+SP+SS TET P    + PKA SDSEN+AESRL+IK+P KQ  PEHKKKKKIK +
Sbjct: 181 PAMQLISPSSSATET-PHQPFVVPKAPSDSENYAESRLLIKLPNKQVVPEHKKKKKIKFT 239

Query: 226 VPKVSDETS-EVGP---TQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFP 281
           VP  S ETS +  P    QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFP
Sbjct: 240 VPLGSAETSHDSSPPPQQQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFP 299

Query: 282 EYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNTL 336
           EYRPAASPTFVPSLHSNSHKKV+EMRNK   K ++ G  T+MT++PE IPNN+ L
Sbjct: 300 EYRPAASPTFVPSLHSNSHKKVLEMRNKVGDKLVMPGATTIMTNSPEFIPNNSNL 354

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097884|ref|XP_002311088.1| predicted protein [Populus trichocarpa] gi|222850908|gb|EEE88455.1| predicted protein [Populus trichocarpa]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/355 (69%), Positives = 273/355 (76%), Gaps = 33/355 (9%)

Query: 1   MIG-----TNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLP-------------NADSNSF 42
           MIG     +NFMDEIDCGSFF+HIDDLL+FP++DV+A LP             N D NSF
Sbjct: 1   MIGQTNTTSNFMDEIDCGSFFEHIDDLLEFPSDDVDATLPDCTTTNNHTSCFMNNDDNSF 60

Query: 43  PSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQ 102
           P IW TQSDSLPGS       ++DLS +LSVPYEDIVQLEWLSNFVEDSFSGGSLTM K+
Sbjct: 61  PGIWSTQSDSLPGS-------ASDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMKKE 113

Query: 103 ESSTITKDDS---SHNQFQTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPR 159
           ES+ +   +S      QFQTSSPVSVLESSSSCSGEKT   SPE  A G+RGRARSKRPR
Sbjct: 114 ESTIVNNKESPPHHQYQFQTSSPVSVLESSSSCSGEKTAPRSPEVGASGKRGRARSKRPR 173

Query: 160 PATFNPRPPVQLVSPTSSVTET-QPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKK 218
           PATF PRP +QL+SPTSS+TE  QP    + PK + DSENFAESRLVIKIP   +PEHKK
Sbjct: 174 PATFTPRPAMQLISPTSSITEVPQP---FVPPKIALDSENFAESRLVIKIPNHVDPEHKK 230

Query: 219 KKKIKLSVPKVSDETSE-VGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSG 277
           KKKIK +VP    E ++   P QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSG
Sbjct: 231 KKKIKFTVPLGPVEMNQNSSPQQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSG 290

Query: 278 RLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPN 332
           RLFPEYRPAASPTFVPSLHSNSHKKVVEMR K+ +K  V+    M+ + PELIPN
Sbjct: 291 RLFPEYRPAASPTFVPSLHSNSHKKVVEMRAKSGEKITVSRPAAMVANPPELIPN 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113043|ref|XP_002316371.1| predicted protein [Populus trichocarpa] gi|222865411|gb|EEF02542.1| predicted protein [Populus trichocarpa]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/352 (64%), Positives = 252/352 (71%), Gaps = 56/352 (15%)

Query: 1   MIG-----TNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNA-------------DSNSF 42
           MIG     + FMDEIDCGSFFDHIDDLLDFP++DV+A LP+              D NSF
Sbjct: 1   MIGQTNTSSGFMDEIDCGSFFDHIDDLLDFPSDDVDASLPDCTTTNNHASCFIDNDDNSF 60

Query: 43  PSIWPTQSDSLPGSDSVFSNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQ 102
           P IW +QSDSLPGS       ++DLS +LSVPYEDIVQLEWLSNFVEDSFSGGSLTM K+
Sbjct: 61  PGIWSSQSDSLPGS-------ASDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMKKE 113

Query: 103 ESSTITKDDSS-HNQFQTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPA 161
           ES+++ K DS+ H+QFQTSSPVSVLESSS CSGEK    SPE  A G+ GRARSKRPRPA
Sbjct: 114 ESASVDKKDSTPHHQFQTSSPVSVLESSSDCSGEKNAPRSPEIVASGKCGRARSKRPRPA 173

Query: 162 TFNPRPPVQLVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKK 221
                                           SDSE+FAESRLVIKIP+  +PEHKKKKK
Sbjct: 174 A-----------------------------VPSDSESFAESRLVIKIPEHVDPEHKKKKK 204

Query: 222 IKLSVPKVSDETSEVG-PTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLF 280
           IK  VP  + E ++   P QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLF
Sbjct: 205 IKFIVPSGTVEMNQNSQPQQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLF 264

Query: 281 PEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPN 332
           PEYRPAASPTFVPSLHSNSHKKVVEMR K  +K   +   TMM ++PE IPN
Sbjct: 265 PEYRPAASPTFVPSLHSNSHKKVVEMRAKAGEKITTSRPATMMVNSPEFIPN 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502307|ref|XP_003519961.1| PREDICTED: GATA transcription factor 9-like [Glycine max]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 220/342 (64%), Positives = 254/342 (74%), Gaps = 20/342 (5%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVF 60
           MIG NF+D+IDCGSFFDHIDDLL+FP+++     P A+       W  +SDSLP S +VF
Sbjct: 1   MIG-NFIDDIDCGSFFDHIDDLLEFPDDNAAPVAPPAN------FWSAESDSLPASYTVF 53

Query: 61  S-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQES---STITKDDSSHNQ 116
           S NS TDLS +LSV Y+DIVQLEWLSNFVEDSFSGGS+TM K+E    +T TK+D +H Q
Sbjct: 54  SDNSVTDLSAELSVSYDDIVQLEWLSNFVEDSFSGGSITMKKEEEPQCTTTTKEDIAHAQ 113

Query: 117 FQTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTS 176
           FQT+SPVSVLESSS CSGEK     PE   P   GR RSKRPRPATFNP P +QL+SP S
Sbjct: 114 FQTASPVSVLESSSFCSGEKAASRGPEIYIPVPCGRVRSKRPRPATFNPHPVMQLISPAS 173

Query: 177 SVTE-TQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSE 235
           S  E  Q      +  ASSDSENFAES  VIK PKQ + EHK K+KIK++    S +  +
Sbjct: 174 STGENVQHNATTTSKAASSDSENFAES--VIKGPKQASGEHKNKRKIKVTF--SSGQEQQ 229

Query: 236 VGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSL 295
             P+QAVRKC+HCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF  ++
Sbjct: 230 NAPSQAVRKCLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCAAV 289

Query: 296 HSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPN-NNTL 336
           HSNSHKKV+EMRNK   K   +G  T    +PELIPN NN+L
Sbjct: 290 HSNSHKKVIEMRNKTGTK---SGFATDSAASPELIPNTNNSL 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449036|ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/341 (70%), Positives = 270/341 (79%), Gaps = 18/341 (5%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVF 60
           MIG NFMDEIDCGSFFDHIDDLL+FP EDV  GL   D NSFPSIW   SD LPG DSVF
Sbjct: 1   MIGPNFMDEIDCGSFFDHIDDLLEFPPEDVSGGLMGGDCNSFPSIWTNASDPLPGPDSVF 60

Query: 61  S----NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQ 116
           S    NS++DLS +LSVPYEDIVQLEWLSNFVEDSFSGGS+ ++K++ S +   DS H+Q
Sbjct: 61  SGPNSNSNSDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSIGLNKEDGSIVK--DSPHHQ 118

Query: 117 FQTSSPVSVLESSSSCSGE--KTVLGSPETTAPGRRG--RARSKRPRPATFNPRPPVQLV 172
           FQTSSPVSVLESSSSCSG   KT+       +P  RG  RARSKRPRPATFNPRP +QL+
Sbjct: 119 FQTSSPVSVLESSSSCSGGGGKTI-----PLSPNHRGAQRARSKRPRPATFNPRPAIQLI 173

Query: 173 SPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDE 232
           SPTSSVTE+ PQ  L+ PKASSDSEN+AES  + K+PK    EHKKKKK+KLS+P    E
Sbjct: 174 SPTSSVTES-PQPVLV-PKASSDSENYAESSPLKKMPKPAAAEHKKKKKMKLSLPLGPVE 231

Query: 233 TSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFV 292
            ++  P QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFV
Sbjct: 232 MNQNPPAQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFV 291

Query: 293 PSLHSNSHKKVVEMRNKNCQK-PIVAGTETMMTDAPELIPN 332
           P+LHSNSHKKV+EMRNK C+   + A   T  T  PELIPN
Sbjct: 292 PALHSNSHKKVIEMRNKACENTAMTASPPTGTTSPPELIPN 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449346|ref|XP_004142426.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus] gi|449519488|ref|XP_004166767.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 234/355 (65%), Positives = 271/355 (76%), Gaps = 27/355 (7%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNA----DSNSFPSIWPTQSDSLPGS 56
           MIG NF+DEIDCGSFFDHIDDLLDFP EDV+AGLP A     +NSFP+IWPT S+SLPGS
Sbjct: 1   MIGNNFVDEIDCGSFFDHIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWPTHSESLPGS 60

Query: 57  DSVFS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHN 115
           DSVFS NS++DLS +LSVPYEDIVQL+WL+NFVEDSF G  LTM+K+E   +T ++   N
Sbjct: 61  DSVFSANSNSDLSAELSVPYEDIVQLDWLANFVEDSFCGEGLTMNKEEVKDLTHNN---N 117

Query: 116 QFQTSSPVSVLESSSSCSGEKTVL-GSPETTA--PGR-RGRARSKRPRPATFNPRPPV-Q 170
           QFQTSSPVSVLESSSSCS +KT+   SPE T   PG+ RGRARSKRPRPATF+PR P+ Q
Sbjct: 118 QFQTSSPVSVLESSSSCSSDKTLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRSPIIQ 177

Query: 171 LVSPTSSVTETQ-PQHRL-IAPKASSDSENFAESRLVIKIPKQF---NPEHKKKKKIKLS 225
            +SP SSVTET  P   L + PKA+SD++NFAESR ++K+PK       +  K KKIKLS
Sbjct: 178 RISPASSVTETTTPDQALQLVPKAASDTDNFAESRPLVKLPKHGAGSGTQKIKNKKIKLS 237

Query: 226 VPKVSDETSEVG-----PTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLF 280
                      G      +Q+VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLF
Sbjct: 238 FSLAPPLEGGAGNQNLPSSQSVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLF 297

Query: 281 PEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNT 335
           PEYRPAASPTF+PSLHSNSHKKV+EMRNK  +          ++  PELIPN N+
Sbjct: 298 PEYRPAASPTFIPSLHSNSHKKVLEMRNKTDEN----TAAITISVQPELIPNPNS 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535635|ref|XP_003536350.1| PREDICTED: GATA transcription factor 9-like [Glycine max]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/344 (67%), Positives = 267/344 (77%), Gaps = 13/344 (3%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAG---LPN---ADSNSFPSIWPTQSDSLP 54
           M+G NFMDEIDCGSFFDHIDDLLDFP EDV+ G   LP+    +SNS  SIWP++SDS P
Sbjct: 1   MVGPNFMDEIDCGSFFDHIDDLLDFPVEDVDGGAATLPSVSAGNSNSLASIWPSESDSFP 60

Query: 55  GSDSVFS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSK-QESSTITKDDS 112
            SDSVFS NS++DLS +LSVPYEDIVQLEWLSNFVEDSF GGSLTM+K +E S  TK+DS
Sbjct: 61  ASDSVFSGNSASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKVEEPSCTTKEDS 120

Query: 113 SHNQFQTSSPVSVLESSSSCSGEKTVL-GSPETTAPGRRGRARSKRPRPATFNPRPPVQL 171
            + QF TSSPVSVLESSSSCSG KT+   SPE   P   GRARSKRPRPATFNPRP + L
Sbjct: 121 VNTQFHTSSPVSVLESSSSCSGGKTLPPRSPEIYIPVPCGRARSKRPRPATFNPRPAMNL 180

Query: 172 VSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSD 231
           +SP SS      Q  +I+ KASSDSENFAES+LV K+PK  + E KKKKK+K+ +P    
Sbjct: 181 ISPASSFVGENMQPNVISSKASSDSENFAESQLVPKMPKLASGEPKKKKKVKVPLPVAPA 240

Query: 232 ETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF 291
           + ++   +Q VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF
Sbjct: 241 DNNQNA-SQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF 299

Query: 292 VPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNT 335
            PS+HSNSHKKV+EMR +   K   +G       +PELIPN N+
Sbjct: 300 CPSVHSNSHKKVLEMRCRGFDK---SGFAINSAASPELIPNTNS 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559571|ref|XP_003548072.1| PREDICTED: GATA transcription factor 9-like [Glycine max]

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/338 (64%), Positives = 253/338 (74%), Gaps = 15/338 (4%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFP-SIWPTQSDSLPGSDSV 59
           MIG NF+D+IDCG+FFDHIDDLL+FP++   A    A     P + W  +SDSLP +D+V
Sbjct: 1   MIG-NFIDDIDCGNFFDHIDDLLEFPDDAAAADTSAAAPVPPPANFWSAESDSLPATDTV 59

Query: 60  FS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQE-SSTITKDDSSHNQF 117
           FS NS TDLS +LSVPYEDI+QLEWLSNFVEDSFSGGS+TM K+E   T TK+D +  QF
Sbjct: 60  FSDNSVTDLSAELSVPYEDIMQLEWLSNFVEDSFSGGSMTMKKEEPQCTTTKEDIAPAQF 119

Query: 118 QTSSPVSVLESSSSCSGEKTVLGSPETTAPGRRGRARSKRPRPATFNPRPPVQLVSPTSS 177
           QT+SPVSVLESSS CSGEK      E       GRARSKRPRPATFNP P +QL+SP SS
Sbjct: 120 QTASPVSVLESSSFCSGEK---AGTEINISVPCGRARSKRPRPATFNPNPVMQLISPASS 176

Query: 178 VTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVG 237
             E    +     KASSDSENFAES  VIK PKQ + EHKKKKKIK++ P   +  +   
Sbjct: 177 TGENTQHNAANTSKASSDSENFAES--VIKAPKQASGEHKKKKKIKVTFPSGQERNA--- 231

Query: 238 PTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHS 297
           P+QA+RKC+HCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF  ++HS
Sbjct: 232 PSQAIRKCLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCAAMHS 291

Query: 298 NSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNT 335
           NSHKKV+EMRNK   K   +G  T+   +PELIPN N+
Sbjct: 292 NSHKKVLEMRNKTGTK---SGFATVSAASPELIPNTNS 326

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576225|ref|XP_003556234.1| PREDICTED: GATA transcription factor 9-like [Glycine max]

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/345 (67%), Positives = 266/345 (77%), Gaps = 14/345 (4%)

Query: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAG---LPN----ADSNSFPSIWPTQSDSL 53
           M+G NFMDEIDCGSFFDHIDDLLDFP EDV+ G   LP+     + NS  SIWP +SDS 
Sbjct: 1   MVGPNFMDEIDCGSFFDHIDDLLDFPVEDVDGGAATLPSVAAAGNCNSLASIWPAESDSF 60

Query: 54  PGSDSVFS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSK-QESSTITKDD 111
           P SDSVFS N+++DLS +LSVPYEDIVQLEWLSNFVEDSF GGSLTM+K +E S  TK+D
Sbjct: 61  PTSDSVFSGNTASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKVEEPSCTTKED 120

Query: 112 SSHNQFQTSSPVSVLESSSSCSGEKTV-LGSPETTAPGRRGRARSKRPRPATFNPRPPVQ 170
           S + QF TSSPVSVLESSSSCSG KT  L SPE   P   GR RSKRPRPATFNPRP + 
Sbjct: 121 SVNTQFHTSSPVSVLESSSSCSGGKTFPLSSPEIYIPVPCGRTRSKRPRPATFNPRPAMN 180

Query: 171 LVSPTSSVTETQPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKVS 230
           L+SP SS      Q  +I+ K+SSDSENFAES+LV K+PKQ + E KKKKK+KL +P V 
Sbjct: 181 LISPASSFVGENMQPNVISSKSSSDSENFAESQLVPKMPKQASEEPKKKKKVKLPLPLVP 240

Query: 231 DETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPT 290
            + ++   +Q VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPT
Sbjct: 241 ADNNQ-NASQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPT 299

Query: 291 FVPSLHSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNNNT 335
           F PS+HSNSHKKV+EMR +   K   +G       +PELIPN N+
Sbjct: 300 FCPSVHSNSHKKVLEMRCRGIDK---SGFAINSAASPELIPNTNS 341

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|37572443|dbj|BAC98491.1| AG-motif binding protein-1 [Nicotiana tabacum]

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 205/320 (64%), Positives = 241/320 (75%), Gaps = 25/320 (7%)

Query: 2   IGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPGSDSVFS 61
           +G+N +DEIDCGSFFDHIDDL++FP E+  AGL + D   FP+IW   +D LP SDS+FS
Sbjct: 1   MGSNLVDEIDCGSFFDHIDDLIEFPLENEGAGLSSTDCKDFPTIW---NDPLPDSDSLFS 57

Query: 62  ----NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHNQF 117
               NS++D S +LSVPYEDIVQLEWLS FVEDSFSGG LT+ K ++  + K+ +S  +F
Sbjct: 58  GSHRNSASDFSAELSVPYEDIVQLEWLSAFVEDSFSGGGLTLGK-DNFPLNKE-TSEAKF 115

Query: 118 QTSSPVSVLESSSSCSG-----EKTVLGSPETTAPGRRG--RARSKRPRPATFNPRPPVQ 170
           QTSSPVSVLESSSS S      EKTV      ++P  RG  RARSKRPRPATFNP P +Q
Sbjct: 116 QTSSPVSVLESSSSSSSSSCSVEKTV----PLSSPCHRGPQRARSKRPRPATFNPAPAIQ 171

Query: 171 LVSPTSSVTET-QPQHRLIAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKIKLSVPKV 229
           L+SPTSS TE  QP    +APK +S+SENFAES +  KI K    E K KKK+KLS P  
Sbjct: 172 LISPTSSFTEIPQP---FVAPKITSESENFAESPMK-KILKPAVAEQKTKKKLKLSFPSS 227

Query: 230 SDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP 289
             +T++    Q +RKC HCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP
Sbjct: 228 LVKTNQNPVAQTIRKCQHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP 287

Query: 290 TFVPSLHSNSHKKVVEMRNK 309
           TFVP++HSNSHKKV+EMR K
Sbjct: 288 TFVPAIHSNSHKKVIEMRTK 307

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
TAIR|locus:2082637	322	BME3 "BLUE MICROPYLAR END 3" [	0.809	0.965	0.443	1e-61
TAIR|locus:2123738	308	GATA9 "GATA transcription fact	0.205	0.256	0.670	1.7e-40
TAIR|locus:2155056	339	GATA5 "GATA transcription fact	0.252	0.286	0.582	1.2e-39
TAIR|locus:2103346	240	GATA4 "GATA transcription fact	0.184	0.295	0.718	8.3e-39
TAIR|locus:2055589	264	GATA2 "GATA transcription fact	0.200	0.291	0.675	1.7e-38
TAIR|locus:2145259	331	GATA12 "GATA transcription fac	0.174	0.202	0.776	1.7e-36
TAIR|locus:2080828	312	GATA6 "GATA transcription fact	0.255	0.314	0.595	4.4e-36
TAIR|locus:2205100	303	GATA11 "GATA transcription fac	0.179	0.227	0.768	5.6e-34
TAIR|locus:2122214	238	GATA7 "GATA transcription fact	0.208	0.336	0.629	6.2e-33
TAIR|locus:2205090	308	GATA10 "GATA transcription fac	0.179	0.224	0.753	6.9e-32

TAIR|locus:2082637 BME3 "BLUE MICROPYLAR END 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 150/338 (44%), Positives = 189/338 (55%)

Query:     1 MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLPG-SDSV 59
             MIGT+F +++DCG+FFD++DDL+DFP  D++ G    DS+SFP+IW T  D+ P  SD +
Sbjct:     1 MIGTSFPEDLDCGNFFDNMDDLMDFPGGDIDVGFGIGDSDSFPTIWTTHHDTWPAASDPL 60

Query:    60 FS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQES-STITKDDSSHNQF 117
             FS N+++D S +L VP+EDIV++E   +FVE++     L   K++S ST T   SSH+QF
Sbjct:    61 FSSNTNSDSSPELYVPFEDIVKVERPPSFVEET-----LVEKKEDSFSTNTDSSSSHSQF 115

Query:   118 QTXXXXXXXXXXXXXXGEKTVLGSPETTXXXXXXXXXXXXXXXXTFNPRPPVQLVSPTSS 177
             ++                     S +TT                T  PRPPVQ       
Sbjct:   116 RSSSPVSVLESSSS---------SSQTTNTTSLVLPGKHGRPR-TKRPRPPVQDKDRVKD 165

Query:   178 VTETQPQHRLIA--PKASSDSENFAESRLVIKIPKQFNPEHXXXXXXXLSVPKVSDETSE 235
                     RLI   PK      N   ++   K  K  +          ++   V   +SE
Sbjct:   166 -NVCGGDSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSGIDLEVNGNNVDSYSSE 224

Query:   236 VGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSL 295
               P   +RKCMHCE+TKTPQWR GPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF P+L
Sbjct:   225 QYP---LRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPAL 281

Query:   296 HSNSHKKVVEMRNKNCQKPIVAGTETMMTDAPELIPNN 333
             HSNSHKKV EMRNK C        E    D   LIPNN
Sbjct:   282 HSNSHKKVAEMRNKRCSDGSYITEEN---DLQGLIPNN 316

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009845 "seed germination" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IEP

TAIR|locus:2123738 GATA9 "GATA transcription factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 53/79 (67%), Positives = 63/79 (79%)

Query:   231 DETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPT 290
             D   + G +   R+C+HC   KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPA+SPT
Sbjct:   185 DMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPT 244

Query:   291 FVPSLHSNSHKKVVEMRNK 309
             FV + HSNSH+KV+E+R +
Sbjct:   245 FVMARHSNSHRKVMELRRQ 263

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2155056 GATA5 "GATA transcription factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 60/103 (58%), Positives = 73/103 (70%)

Query:   233 TSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFV 292
             + E+   Q  RKC HC + KTPQWRAGPMG KTLCNACGVRYKSGRL PEYRPA SPTF 
Sbjct:   239 SGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFS 298

Query:   293 PSLHSNSHKKVVEMRNKNCQKPIVAGTET---MMTDAPELIPN 332
               LHSN H+KV+EMR K  ++P  +  ET    +  +P+ +P+
Sbjct:   299 SELHSNHHRKVIEMRRK--KEP-TSDNETGLNQLVQSPQAVPS 338

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

TAIR|locus:2103346 GATA4 "GATA transcription factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
 Identities = 51/71 (71%), Positives = 60/71 (84%)

Query:   243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKK 302
             R+C HC   KTPQWR GP+GPKTLCNACGVRYKSGRL PEYRPA+SPTFV + HSNSH+K
Sbjct:   158 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRK 217

Query:   303 VVEMRNKNCQK 313
             V+E+R +  Q+
Sbjct:   218 VMELRRQKEQQ 228

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2055589 GATA2 "GATA transcription factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 54/80 (67%), Positives = 65/80 (81%)

Query:   230 SDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP 289
             S ET+E G    +R+C HC   KTPQWR GP+GPKTLCNACGVR+KSGRL PEYRPA+SP
Sbjct:   169 SSETTEGG---GMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSP 225

Query:   290 TFVPSLHSNSHKKVVEMRNK 309
             TFV + HSNSH+KV+E+R +
Sbjct:   226 TFVLTQHSNSHRKVMELRRQ 245

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2145259 GATA12 "GATA transcription factor 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
 Identities = 52/67 (77%), Positives = 59/67 (88%)

Query:   243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKK 302
             R+C+HC   KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPAASPTFV + HSNSH+K
Sbjct:   219 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRK 278

Query:   303 VVEMRNK 309
             V+E+R +
Sbjct:   279 VMELRRQ 285

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2080828 GATA6 "GATA transcription factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
 Identities = 59/99 (59%), Positives = 65/99 (65%)

Query:   211 QFNPEHXXXXXXXLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNAC 270
             QF  E          V K + +T     TQ  R+C HC + KTPQWRAGP+G KTLCNAC
Sbjct:   190 QFLDEPMTKTQKKKKVWKNAGQTQTQTQTQT-RQCGHCGVQKTPQWRAGPLGAKTLCNAC 248

Query:   271 GVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNK 309
             GVRYKSGRL PEYRPA SPTF   LHSN H KV+EMR K
Sbjct:   249 GVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRK 287

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2205100 GATA11 "GATA transcription factor 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
 Identities = 53/69 (76%), Positives = 63/69 (91%)

Query:   242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHK 301
             VRKC HCE TKTPQWR GP GPKTLCNACGVR++SGRL PEYRPA+SPTF+P++HSNSH+
Sbjct:   219 VRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHR 278

Query:   302 KVVEMRNKN 310
             K++EMR K+
Sbjct:   279 KIIEMRRKD 287

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2122214 GATA7 "GATA transcription factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 51/81 (62%), Positives = 60/81 (74%)

Query:   228 KVSDETSEVGPTQAVRKCM-HCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPA 286
             KV      V   Q +R+C  HC + KTPQWR GP+G KTLCNACGVR+KSGRL PEYRPA
Sbjct:   148 KVDASYGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPA 207

Query:   287 ASPTFVPSLHSNSHKKVVEMR 307
              SPTF   +HSNSH+KV+E+R
Sbjct:   208 CSPTFTNEIHSNSHRKVLELR 228

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2205090 GATA10 "GATA transcription factor 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 52/69 (75%), Positives = 60/69 (86%)

Query:   242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHK 301
             VR C HCE   TPQWR GP GPKTLCNACGVR+KSGRL PEYRPA+SPTF+PS+HSNSH+
Sbjct:   217 VRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHR 276

Query:   302 KVVEMRNKN 310
             K++EMR K+
Sbjct:   277 KIIEMRKKD 285

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	384
smart00401	52	smart00401, ZnF_GATA, zinc finger binding to DNA c	2e-14
pfam00320	36	pfam00320, GATA, GATA zinc finger	2e-13
cd00202	54	cd00202, ZnF_GATA, Zinc finger DNA binding domain;	3e-12

>gnl|CDD|214648 smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG]

 Score = 66.7 bits (163), Expect = 2e-14
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 241 AVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVP 293
           + R C +C  T+TP WR GP G KTLCNACG+ YK        RP +      
Sbjct: 2   SGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGG--LKRPLSLKKDGI 52

Length = 52

>gnl|CDD|109380 pfam00320, GATA, GATA zinc finger

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 20/35 (57%), Positives = 24/35 (68%)

Query: 245 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRL 279
           C +C  TKTP WR GP G +TLCNACG+ Y+   L
Sbjct: 1   CSNCGTTKTPLWRRGPDGNRTLCNACGLYYRKHGL 35

This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. Length = 36

>gnl|CDD|238123 cd00202, ZnF_GATA, Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 244 KCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF 291
            C +C  T TP WR GP G  TLCNACG+ +K        RP +    
Sbjct: 1   ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHG---VMRPLSKRKK 45

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
cd00202	54	ZnF_GATA Zinc finger DNA binding domain; binds spe	99.5
smart00401	52	ZnF_GATA zinc finger binding to DNA consensus sequ	99.46
PF00320	36	GATA: GATA zinc finger; InterPro: IPR000679 Zinc f	99.38
KOG1601	340	consensus GATA-4/5/6 transcription factors [Transc	99.05
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	98.31
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	82.05
KOG3554	693	consensus Histone deacetylase complex, MTA1 compon	80.3

>cd00202 ZnF_GATA Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Probab=99.50  E-value=6.1e-15  Score=111.74  Aligned_cols=44  Identities=45%  Similarity=0.942  Sum_probs=39.6

Q ss_pred             ccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCCC
Q 016724          244 KCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPT  290 (384)
Q Consensus       244 ~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~spt  290 (384)
                      .|+||++++||+||+||.|..+||||||+||+++   +..||+..+.
T Consensus         1 ~C~~C~~~~Tp~WR~g~~~~~~LCNaCgl~~~k~---~~~rp~~~~~   44 (54)
T cd00202           1 ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKH---GVMRPLSKRK   44 (54)
T ss_pred             CCCCCCCCCCcccccCCCCcchHHHHHHHHHHhc---CCCCCcccCc
Confidence            4999999999999999988899999999999954   4889988763

>smart00401 ZnF_GATA zinc finger binding to DNA consensus sequence [AT]GATA[AG]

Probab=99.46  E-value=3.4e-14  Score=106.73  Aligned_cols=46  Identities=50%  Similarity=0.949  Sum_probs=39.1

Q ss_pred             CcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCC
Q 016724          242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP  289 (384)
Q Consensus       242 ~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~sp  289 (384)
                      .+.|.||++++||+||+||.|..+||||||++|++.+..  +||...+
T Consensus         3 ~~~C~~C~~~~T~~WR~g~~g~~~LCnaCgl~~~k~~~~--~rp~~~~   48 (52)
T smart00401        3 GRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGL--KRPLSLK   48 (52)
T ss_pred             CCCcCCCCCCCCCccccCCCCCCcEeecccHHHHHcCCC--CCccccc
Confidence            578999999999999999999889999999999964433  4666654

>PF00320 GATA: GATA zinc finger; InterPro: IPR000679 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.38  E-value=4.6e-14  Score=98.71  Aligned_cols=35  Identities=57%  Similarity=1.169  Sum_probs=27.9

Q ss_pred             cccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCC
Q 016724          245 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRL  279 (384)
Q Consensus       245 C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl  279 (384)
                      |.||++++||+||+||.|..+||||||++|++++.
T Consensus         1 C~~C~tt~t~~WR~~~~g~~~LCn~Cg~~~kk~~~   35 (36)
T PF00320_consen    1 CSNCGTTETPQWRRGPNGNRTLCNACGLYYKKYGK   35 (36)
T ss_dssp             -TTT--ST-SSEEEETTSEE-EEHHHHHHHHHHSS
T ss_pred             CcCCcCCCCchhhcCCCCCCHHHHHHHHHHHHhCC
Confidence            89999999999999999988899999999998654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents GATA-type zinc fingers (Znf). A number of transcription factors (including erythroid-specific transcription factor and nitrogen regulatory proteins), specifically bind the DNA sequence (A/T)GATA(A/G) [] in the regulatory regions of genes. They are consequently termed GATA-binding transcription factors. The interactions occur via highly-conserved Znf domains in which the zinc ion is coordinated by 4 cysteine residues [, ]. NMR studies have shown the core of the Znf to comprise 2 irregular anti-parallel beta-sheets and an alpha-helix, followed by a long loop to the C-terminal end of the finger. The N-terminal part, which includes the helix, is similar in structure, but not sequence, to the N-terminal zinc module of the glucocorticoid receptor DNA-binding domain. The helix and the loop connecting the 2 beta-sheets interact with the major groove of the DNA, while the C-terminal tail wraps around into the minor groove. It is this tail that is the essential determinant of specific binding. Interactions between the Znf and DNA are mainly hydrophobic, explaining the preponderance of thymines in the binding site; a large number of interactions with the phosphate backbone have also been observed []. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0008270 zinc ion binding, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 3GAT_A 2GAT_A 1GAU_A 1GAT_A 1Y0J_A 1GNF_A 2L6Z_A 2L6Y_A 3DFV_D 3DFX_B ....

>KOG1601 consensus GATA-4/5/6 transcription factors [Transcription]

Probab=99.05  E-value=1.5e-10  Score=103.72  Aligned_cols=71  Identities=61%  Similarity=1.135  Sum_probs=61.5

Q ss_pred             CcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcC---CCCCCCCCCCCCC--------------ccCCcccc------
Q 016724          242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSG---RLFPEYRPAASPT--------------FVPSLHSN------  298 (384)
Q Consensus       242 ~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~---rl~p~~RP~~spt--------------f~~~~hsn------  298 (384)
                      ...|.+|++++||+||+++.|.+.+|||||++|+++   +.++.++...+++              +....|.+      
T Consensus       199 ~~~c~~~~~~~t~~~r~~~~g~~~~cnacgl~~k~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (340)
T KOG1601|consen  199 LRQCSNCGTTKTPLWRRGPEGPKSLCNACGLRYKKGGVRRPLPEKRPASSPRNVSPKGSGAVKGRTFTKSLHSNSAQLLL  278 (340)
T ss_pred             CcccCCCCCCCCcceecCCCCCccccccchhhhhhcCccccccccCccccccccCCCccccccCCCCCcccccchhhhhh
Confidence            579999999999999999999999999999999998   7888889888887              55566666      


Q ss_pred             -----------chhHHHHHhhhcCC
Q 016724          299 -----------SHKKVVEMRNKNCQ  312 (384)
Q Consensus       299 -----------~hrkv~~~R~~~~~  312 (384)
                                 .+.++.++++.+.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~r~~~~  303 (340)
T KOG1601|consen  279 APSKSEPPLLSSHQRVAEVRRYRES  303 (340)
T ss_pred             hhcccCccccccchHHHHHhhccCc
Confidence                       67888888887764

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=98.31  E-value=2.4e-07  Score=96.98  Aligned_cols=53  Identities=34%  Similarity=0.597  Sum_probs=45.3

Q ss_pred             CcccccCCCCCCCCcCCCCCC----ChhhhhhhhhhhhcCCCCCCCC-CCCCCCccCCccc
Q 016724          242 VRKCMHCEITKTPQWRAGPMG----PKTLCNACGVRYKSGRLFPEYR-PAASPTFVPSLHS  297 (384)
Q Consensus       242 ~~~C~~C~tt~TP~WR~GP~G----~~~LCNACGl~yk~~rl~p~~R-P~~sptf~~~~hs  297 (384)
                      ...|.+|.++.||+|||+..+    .-.||||||++|+   +|+..| |.++++.+..-|.
T Consensus       158 ~~vc~Nc~t~stPlwrR~~~~~s~~~n~lcnaCgl~~k---lhg~~r~P~t~ks~~~ks~~  215 (498)
T COG5641         158 PHVCSNCKTTSTPLWRRASSESSLPGNNLCNACGLYLK---LHGSPRAPISLKSDSIKSRS  215 (498)
T ss_pred             cchhccccccCCccccccccccccCCcccccccccccc---ccCCcCCCcccccccccccc
Confidence            348999999999999999993    3899999999999   999999 9999965554433

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=82.05  E-value=0.86  Score=48.76  Aligned_cols=44  Identities=30%  Similarity=0.334  Sum_probs=34.2

Q ss_pred             CcccccCCC-CCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCC
Q 016724          242 VRKCMHCEI-TKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAAS  288 (384)
Q Consensus       242 ~~~C~~C~t-t~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~s  288 (384)
                      ...|.+|++ +.||.||+...-.-++|||||.+.+   +...+||..-
T Consensus       297 ~~~~s~~~~~~~tp~~~r~~~~~s~~~n~~~~~~~---~~~~~~p~~p  341 (498)
T COG5641         297 DKKRSTLTTSTATPLWRRTSDKSSFSCNASGSALK---PPGSKRPLLP  341 (498)
T ss_pred             hcCcccccccccCcccccccccccccccccccccC---CcccccccCC
Confidence            567888887 7789998887776999999999998   5555555543

>KOG3554 consensus Histone deacetylase complex, MTA1 component [Chromatin structure and dynamics]

Probab=80.30  E-value=1.2  Score=47.60  Aligned_cols=37  Identities=32%  Similarity=0.627  Sum_probs=31.8

Q ss_pred             CCCcccccCCCCCCCCc--CCCCCCChhhhhhhhhhhhc
Q 016724          240 QAVRKCMHCEITKTPQW--RAGPMGPKTLCNACGVRYKS  276 (384)
Q Consensus       240 ~~~~~C~~C~tt~TP~W--R~GP~G~~~LCNACGl~yk~  276 (384)
                      +.++.|-+|+|+..-+|  .-+|.-.+.||--|=+||||
T Consensus       384 ~~g~~CEsC~ttqs~qWYsWGppnmqcrLCasCWiyWKK  422 (693)
T KOG3554|consen  384 QDGRACESCYTTQSLQWYSWGPPNMQCRLCASCWIYWKK  422 (693)
T ss_pred             CCCCcccccccccccceeccCCCCccchhhHHHHHHHHH
Confidence            45789999999999999  44566667899999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	5e-14
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	7e-11
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	8e-09
3dfx_A	63	Trans-acting T-cell-specific transcription factor	2e-07
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	5e-07

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans} Length = 71

 Score = 65.7 bits (160), Expect = 5e-14
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 240 QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAA 287
           +   +C +C +T+T +WR         CNAC +  +    + + RP  
Sbjct: 6   KKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQR---KYNKTRPVT 50

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A Length = 46

 Score = 55.9 bits (135), Expect = 7e-11
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 275
           R+C++C  T TP WR    G   LCNACG+ +K
Sbjct: 5   RECVNCGATATPLWRRDRTG-HYLCNACGLYHK 36

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I* Length = 43

 Score = 50.2 bits (120), Expect = 8e-09
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 275
             C +C    TP WR  P G + LCNACG+  K
Sbjct: 2   TTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK 33

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* Length = 63

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 237 GPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 275
              +A   C +C+ T T  WR    G   +CNACG+ YK
Sbjct: 2   AARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYK 39

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A* Length = 66

 Score = 45.8 bits (108), Expect = 5e-07
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 240 QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAA 287
                C +C    TP WR  P G + LCNACG+  K   L    RP +
Sbjct: 7   NGPTTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK---LHGVVRPLS 50

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
3dfx_A	63	Trans-acting T-cell-specific transcription factor	99.68
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	99.64
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	99.6
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.6
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	99.59
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	99.58
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.2

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*

Probab=99.68  E-value=2.1e-18  Score=133.54  Aligned_cols=57  Identities=35%  Similarity=0.696  Sum_probs=45.8

Q ss_pred             CCCcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCCCccCCccccchhHHHHHhhhcC
Q 016724          240 QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNC  311 (384)
Q Consensus       240 ~~~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~sptf~~~~hsn~hrkv~~~R~~~~  311 (384)
                      .....|.||++++||+||+||+|+ +|||||||+|++   +..+||+.+.           +.+|+.|+++.
T Consensus         5 ~~~~~C~~C~tt~Tp~WR~gp~G~-~LCNACGl~~~~---~~~~RP~~~~-----------~~~i~~R~Rk~   61 (63)
T 3dfx_A            5 RAGTSCANCQTTTTTLWRRNANGD-PVCNACGLYYKL---HNINRPLTMK-----------KEGIQTRNRKM   61 (63)
T ss_dssp             CTTCCCTTTCCSCCSSCCCCTTSC-CCCHHHHHHHHH---HSSCCCGGGC-----------CSSCCCCC---
T ss_pred             CCCCcCCCcCCCCCCccCCCCCCC-chhhHHHHHHHH---cCCCCCcCcC-----------CCccccccCCC
Confidence            456789999999999999999996 999999999995   4568999876           55666666654

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*

Probab=99.64  E-value=7.4e-18  Score=131.56  Aligned_cols=57  Identities=39%  Similarity=0.761  Sum_probs=48.1

Q ss_pred             CCCcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCCCccCCccccchhHHHHHhhhcC
Q 016724          240 QAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNC  311 (384)
Q Consensus       240 ~~~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~sptf~~~~hsn~hrkv~~~R~~~~  311 (384)
                      ...+.|.||++++||+||+||+|. +|||||||||+   ++...||..++           +.+|+.|+|+.
T Consensus         7 ~~~~~C~~C~t~~Tp~WR~gp~G~-~LCNaCGl~~~---~~~~~RP~~~k-----------~~~ik~R~R~~   63 (66)
T 4gat_A            7 NGPTTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLK---LHGVVRPLSLK-----------TDVIKKRNRNS   63 (66)
T ss_dssp             SSSCCCTTTCCCCCSSCEEETTTE-EECHHHHHHHH---HHCSCCCGGGC-----------CSCCCCCCCSC
T ss_pred             CCCCCCCCCCCCCCCcCCcCCCCC-CccHHHHHHHH---HcCCCCchhhc-----------cccccccccCC
Confidence            456899999999999999999995 99999999999   67778999987           44666666554

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*

Probab=99.60  E-value=1.2e-16  Score=115.35  Aligned_cols=42  Identities=43%  Similarity=0.868  Sum_probs=37.3

Q ss_pred             cccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCC
Q 016724          243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAAS  288 (384)
Q Consensus       243 ~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~s  288 (384)
                      +.|.+|++++||+||+||+|+ +|||||||||+   ++...||+.+
T Consensus         2 ~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k---~~~~~RP~~l   43 (43)
T 2vut_I            2 TTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLK---LHGVVRPLSL   43 (43)
T ss_dssp             CCCSSSCCCCCSCCEECTTSC-EECHHHHHHHH---HHSSCCCCCC
T ss_pred             CcCCccCCCCCCccccCCCCC-cccHHHHHHHH---HhCCCCCCCC
Confidence            479999999999999999996 99999999999   5666788753

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.60  E-value=4.3e-17  Score=139.01  Aligned_cols=80  Identities=34%  Similarity=0.610  Sum_probs=57.2

Q ss_pred             hhhcCCCCCChhhhhccccccCCCCCCCCccCCCCCCCCcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCC
Q 016724          204 LVIKIPKQFNPEHKKKKKIKLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEY  283 (384)
Q Consensus       204 l~~kmp~~~~~~~KkKKk~k~~~p~~~~~~~~~s~~~~~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~  283 (384)
                      ++.++.+...+..++|++...             .......|.||++++||+||+||+| ++|||||||||+   +|...
T Consensus        34 l~~Kl~G~nRP~~KpKKR~~~-------------~~~~~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~---~~~~~   96 (115)
T 4hc9_A           34 LYHKMNGQNRPLIKPKRRLSA-------------ARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYK---LHNIN   96 (115)
T ss_dssp             HHHHHHSSCCCCSSCCCCCCC-------------CCCTTCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHH---HHSSC
T ss_pred             hhhhhcccccccccccccccc-------------cccccccCCCcCCCCcceeEECCCC-CCcchHHHHHHH---HhCCC
Confidence            345555555555555544321             1234579999999999999999999 999999999999   66677


Q ss_pred             CCCCCCCccCCccccchhHHHHHhhhcC
Q 016724          284 RPAASPTFVPSLHSNSHKKVVEMRNKNC  311 (384)
Q Consensus       284 RP~~sptf~~~~hsn~hrkv~~~R~~~~  311 (384)
                      ||+.+.           +.+|++|+++.
T Consensus        97 rp~~~~-----------~~~i~~r~r~~  113 (115)
T 4hc9_A           97 RPLTMK-----------KEGIQTRNRKM  113 (115)
T ss_dssp             CCGGGC-----------CSSCCCCC---
T ss_pred             CCcccc-----------ccchhhccccc
Confidence            999887           45666666654

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A

Probab=99.59  E-value=3.6e-16  Score=114.25  Aligned_cols=42  Identities=43%  Similarity=0.879  Sum_probs=37.5

Q ss_pred             CcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCC
Q 016724          242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAA  287 (384)
Q Consensus       242 ~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~  287 (384)
                      .+.|.||++++||+||+||+|+ +|||||||||+   ++...||++
T Consensus         4 ~~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k---~~~~~RP~~   45 (46)
T 1gnf_A            4 ARECVNCGATATPLWRRDRTGH-YLCNACGLYHK---MNGQNRPLI   45 (46)
T ss_dssp             SCCCTTTCCCCCSSCBCCTTCC-CBCSHHHHHHH---HTCSCCCCC
T ss_pred             CCCCCCcCCCCCCcCccCCCCC-ccchHHHHHHH---HcCCCCCCC
Confidence            4689999999999999999995 99999999999   566777764

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}

Probab=99.58  E-value=2.1e-16  Score=124.94  Aligned_cols=46  Identities=26%  Similarity=0.544  Sum_probs=38.3

Q ss_pred             CCcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCC
Q 016724          241 AVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP  289 (384)
Q Consensus       241 ~~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~sp  289 (384)
                      ....|.||+|++||+||+|+.+..+|||||||||+   ++..+||+.+.
T Consensus         7 ~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~~~---~~~~~RP~~~~   52 (71)
T 2kae_A            7 KSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQR---KYNKTRPVTAV   52 (71)
T ss_dssp             -CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHH---HHHSCCCTHHH
T ss_pred             CCCcCCccCCCCCCccccCCCCCCccchHHHHHHH---HhCCCCCcccc
Confidence            45789999999999999954444499999999999   56778999864

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.20  E-value=2.7e-12  Score=109.44  Aligned_cols=45  Identities=42%  Similarity=0.858  Sum_probs=38.9

Q ss_pred             CCcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCC
Q 016724          241 AVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP  289 (384)
Q Consensus       241 ~~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~sp  289 (384)
                      ..+.|.||+++.||+||+|+.| .+|||||||||+   +++..||...|
T Consensus         4 ~~~~C~~Cg~~~Tp~WRr~~~g-~~lCnaCgl~~K---l~G~nRP~~Kp   48 (115)
T 4hc9_A            4 MGRECVNCGATSTPLWRRDGTG-HYLCNACGLYHK---MNGQNRPLIKP   48 (115)
T ss_dssp             --CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHH---HHSSCCCCSSC
T ss_pred             CCCCCCCCCCccCCcceECCCC-CCcCcchhhhhh---hcccccccccc
Confidence            4578999999999999999999 899999999999   67788887544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	384
d1y0ja1	39	g.39.1.1 (A:200-238) Erythroid transcription facto	4e-13
d2vuti1	42	g.39.1.1 (I:671-712) Erythroid transcription facto	5e-10
d3gata_	66	g.39.1.1 (A:) Erythroid transcription factor GATA-	5e-08

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 39

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.9 bits (148), Expect = 4e-13
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 275
           R+C++C  T TP WR    G   LCNACG+ +K
Sbjct: 3   RECVNCGATATPLWRRDRTG-HYLCNACGLYHK 34

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]} Length = 42

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

 Score = 52.1 bits (125), Expect = 5e-10
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 245 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAA 287
           C +C    TP WR  P G + LCNACG+  K   L    RP +
Sbjct: 3   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLK---LHGVVRPLS 41

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 66

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.3 bits (112), Expect = 5e-08
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 15/67 (22%)

Query: 243 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKK 302
             C +C+ + T  WR  PMG   +CNACG+ YK  ++    RP               K 
Sbjct: 5   TVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV---NRPL-----------TMRKD 49

Query: 303 VVEMRNK 309
            ++ RN+
Sbjct: 50  GIQTRNR 56

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d2vuti1	42	Erythroid transcription factor GATA-1 {Emericella	99.7
d3gata_	66	Erythroid transcription factor GATA-1 {Chicken (Ga	99.66
d1y0ja1	39	Erythroid transcription factor GATA-1 {Mouse (Mus	99.61

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

Probab=99.70  E-value=7.6e-19  Score=124.43  Aligned_cols=41  Identities=44%  Similarity=0.904  Sum_probs=38.7

Q ss_pred             ccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCC
Q 016724          244 KCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAAS  288 (384)
Q Consensus       244 ~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~s  288 (384)
                      .|.||++++||+||+||+| ++|||||||||+   +++..||++|
T Consensus         2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k---~~g~~RP~sl   42 (42)
T d2vuti1           2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK---LHGVVRPLSL   42 (42)
T ss_dssp             CCSSSCCCCCSCCEECTTS-CEECHHHHHHHH---HHSSCCCCCC
T ss_pred             cCCCCCCCCCccceeCCCC-CCchhhhhHHHH---HcCCCCCCCC
Confidence            5999999999999999999 899999999999   8899999875

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.66  E-value=2.2e-18  Score=132.78  Aligned_cols=56  Identities=38%  Similarity=0.799  Sum_probs=48.1

Q ss_pred             CcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcCCCCCCCCCCCCCCccCCccccchhHHHHHhhhcCC
Q 016724          242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRNKNCQ  312 (384)
Q Consensus       242 ~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~rl~p~~RP~~sptf~~~~hsn~hrkv~~~R~~~~~  312 (384)
                      +..|.||++++||+||+||.| ++|||||||||+   ++...||+.+.           +++|+.|+++..
T Consensus         4 g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~---~~~~~RP~~~~-----------~~~i~~r~r~~~   59 (66)
T d3gata_           4 GTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYK---LHQVNRPLTMR-----------KDGIQTRNRKVS   59 (66)
T ss_dssp             TCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHH---HHCSCCCGGGC-----------CSSCCCCSCCCC
T ss_pred             CCCCCCCCCCCCcccccCCCC-CcccchhHHHHH---HhCCcCCcccc-----------ccccccccCCCC
Confidence            467999999999999999999 799999999999   56778998765           667777777664

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=4.3e-17  Score=113.73  Aligned_cols=35  Identities=46%  Similarity=0.978  Sum_probs=32.4

Q ss_pred             CcccccCCCCCCCCcCCCCCCChhhhhhhhhhhhcC
Q 016724          242 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSG  277 (384)
Q Consensus       242 ~~~C~~C~tt~TP~WR~GP~G~~~LCNACGl~yk~~  277 (384)
                      .++|.||++++||+||+||.| ++|||||||||+.+
T Consensus         2 ~r~C~~Cgtt~Tp~WR~gp~G-~~LCNACGl~~r~~   36 (39)
T d1y0ja1           2 ARECVNCGATATPLWRRDRTG-HYLCNACGLYHKMN   36 (39)
T ss_dssp             CCCCSSSCCCCCSCCEECTTS-CEECSSHHHHHHHS
T ss_pred             cCCCCCCCCCCCcccccCCCC-CEeeHHhHHHHHHh
Confidence            478999999999999999999 79999999999953