Your job contains 1 sequence.
>016725
MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTM
LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG
RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS
VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY
GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI
ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG
QLGIELVNNQTERGNPERVDIDLS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016725
(384 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 1266 5.2e-129 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 299 3.8e-26 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 274 6.6e-22 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 274 6.7e-22 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 275 7.1e-22 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 275 7.1e-22 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 274 9.0e-22 1
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 274 9.1e-22 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 268 3.9e-21 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 268 3.9e-21 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 199 4.1e-21 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 267 4.9e-21 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 267 5.0e-21 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 265 8.2e-21 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 204 8.0e-20 2
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 247 6.8e-19 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 233 1.0e-17 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 189 4.3e-16 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 192 5.5e-16 2
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 193 9.3e-16 2
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 223 1.2e-15 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 219 4.6e-15 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 191 9.9e-15 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 190 1.3e-14 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 190 1.3e-14 2
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 214 1.5e-14 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 183 2.9e-14 2
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 211 3.5e-14 1
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 152 3.9e-14 3
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 219 4.0e-14 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 219 4.0e-14 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 219 6.7e-14 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 175 7.6e-14 2
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 156 9.7e-14 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 174 9.7e-14 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 222 1.0e-13 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 206 1.4e-13 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 206 1.4e-13 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 164 2.0e-13 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 154 2.6e-13 2
UNIPROTKB|C9JQZ4 - symbol:RCC1 "Regulator of chromosome c... 147 4.1e-13 2
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 200 6.9e-13 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 163 7.5e-13 2
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 199 7.9e-13 2
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 199 8.1e-13 2
POMBASE|SPBC557.03c - symbol:pim1 "Ran GDP/GTP exchange f... 132 1.1e-12 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 156 1.4e-12 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 197 1.5e-12 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 140 1.5e-12 2
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 168 1.6e-12 2
UNIPROTKB|C9JW69 - symbol:RCC1 "Regulator of chromosome c... 147 1.7e-12 2
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 146 1.8e-12 3
UNIPROTKB|C9JMJ4 - symbol:RCC1 "Regulator of chromosome c... 147 1.8e-12 2
UNIPROTKB|F1RMH6 - symbol:RCCD1 "Uncharacterized protein"... 152 2.2e-12 3
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 151 2.4e-12 3
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 195 2.6e-12 1
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 147 2.7e-12 2
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 163 3.4e-12 2
UNIPROTKB|P23800 - symbol:RCC1 "Regulator of chromosome c... 155 3.6e-12 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 207 5.7e-12 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 145 9.2e-12 2
UNIPROTKB|E1B8U7 - symbol:RCCD1 "Uncharacterized protein"... 148 1.0e-11 3
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 151 1.2e-11 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 151 1.3e-11 2
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 185 3.2e-11 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 168 3.8e-11 2
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 145 5.7e-11 2
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 183 6.1e-11 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 156 9.8e-11 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 180 1.3e-10 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 175 1.8e-10 1
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 143 1.9e-10 2
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 129 2.3e-10 2
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 126 2.3e-10 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 173 3.3e-10 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 172 3.9e-10 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 172 3.9e-10 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 172 3.9e-10 1
DICTYBASE|DDB_G0278255 - symbol:DDB_G0278255 "regulator o... 162 4.4e-10 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 137 4.7e-10 2
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 181 5.0e-10 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 139 5.6e-10 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 143 8.0e-10 2
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 168 8.3e-10 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 169 8.5e-10 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 167 1.5e-09 1
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 130 1.8e-09 2
UNIPROTKB|J9NZT9 - symbol:HERC3 "Uncharacterized protein"... 169 1.8e-09 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 166 1.9e-09 1
RGD|1312048 - symbol:Mycbp2 "MYC binding protein 2, E3 ub... 122 2.4e-09 2
DICTYBASE|DDB_G0276527 - symbol:DDB_G0276527 "putative bi... 130 2.7e-09 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 164 3.2e-09 1
UNIPROTKB|C9JRH2 - symbol:RCC1 "Regulator of chromosome c... 147 4.8e-09 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 168 6.0e-09 2
UNIPROTKB|D4A2D3 - symbol:Mycbp2 "Protein Mycbp2" species... 122 7.8e-09 2
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 135 8.0e-09 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 132 8.1e-09 2
UNIPROTKB|E1BH40 - symbol:MYCBP2 "Uncharacterized protein... 122 9.6e-09 2
MGI|MGI:2179432 - symbol:Mycbp2 "MYC binding protein 2" s... 121 1.0e-08 2
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 146 1.1e-08 2
WARNING: Descriptions of 94 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
Identities = 247/343 (72%), Positives = 269/343 (78%)
Query: 42 RSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
RSL TMLISD G+VYA GK+SFGEAEYG QGTK VT+PQLV SLKNI
Sbjct: 190 RSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNI 249
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXX 161
FVVQAAIGN+FTAVLSREG+VYTFSWGND RLGH TE DVEP PLLG LEN+PVVQI
Sbjct: 250 FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309
Query: 162 XXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXX 221
QP+GM+VYSV SRTDEK+PR+IEQFQ+LNLQP
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW 369
Query: 222 XXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
GQDGRVCTWGWGRYGCLGHGNEECESVPKVV+ L+ VKA+HVATGDYTTFVVS+D
Sbjct: 370 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDD 429
Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
GDVYSFGCGESASLGH+ D QGNRHANVL+P +VTSLKQVNER+VQISLTNSIYWNAH
Sbjct: 430 GDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAH 489
Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
TFALTESGKL+AFGAGD+GQLG EL NQ ER PE+VDIDLS
Sbjct: 490 TFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDIDLS 532
Score = 202 (76.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 56/134 (41%), Positives = 78/134 (58%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V T+G+ G LGHG+ E E+ + V++L V+ I A G T ++S+DG VY+ C
Sbjct: 162 GEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA--C 219
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ S G A GQG + V TPQLVTSLK + VVQ ++ N Y+ A L+ G
Sbjct: 220 GKE-SFGE-AEYGGQGTKP--VTTPQLVTSLKNIF--VVQAAIGN--YFTA---VLSREG 268
Query: 350 KLYAFGAGDKGQLG 363
K+Y F G+ G+LG
Sbjct: 269 KVYTFSWGNDGRLG 282
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 299 (110.3 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 96/306 (31%), Positives = 139/306 (45%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+ +GQV G +S + + ++ + P+LVE+LK Q A G FT LSREG
Sbjct: 178 VLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGH 236
Query: 122 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI-PVVQIXXXXXXXXXXXXQPSGMAVY 179
YT +LGH + D P P ++ L+ I PVVQI S VY
Sbjct: 237 AYTCGSNTHGQLGHG-DTLD-RPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGS---VY 291
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + DE PR+I+ F+ + +GRV TWG G
Sbjct: 292 SFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGY 351
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH-- 297
G LGHG+E + P+V+ LN+ A+ V TFV+ E G +Y FG SLG
Sbjct: 352 CGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
++D VL P+++ LK RV Q+S +Y HT +T+ G+++ FG
Sbjct: 412 RGVSD-------KVLRPRVLECLKP--HRVSQVS--TGLY---HTIVVTQRGRIFGFGDN 457
Query: 358 DKGQLG 363
++ QLG
Sbjct: 458 ERAQLG 463
Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 61/247 (24%), Positives = 111/247 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLS 117
T+ +S G Y G ++ G+ +G + V P++VE LK I VVQ A G + ++
Sbjct: 228 TVFLSREGHAYTCGSNTHGQLGHGDTLDRPV--PKVVEFLKTIGPVVQIAAGPSYVLAVT 285
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIXXXXXXXXXXXXQPSGM 176
++G VY+F G++ LGH + ++++P + + I ++++ S
Sbjct: 286 QDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD---SNG 342
Query: 177 AVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 236
VY+ D+ P+++ L N + G + +G
Sbjct: 343 RVYTWGKGYCGALGHGDENDKITPQVL--VNLNNCLAVQVCARKRKTFVLVEGGLLYGFG 400
Query: 237 WGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
W +G LG G + P+V++ L + V+TG Y T VV++ G ++ FG E A
Sbjct: 401 WMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERA 460
Query: 294 SLGHNAI 300
LGH+++
Sbjct: 461 QLGHDSL 467
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 274 (101.5 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 90/346 (26%), Positives = 151/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 2734 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 2791
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 2792 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 2850
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV + +G +Y+ D+
Sbjct: 2851 SPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 2905
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 2906 LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 2965
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 2966 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 3017
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3018 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3056
Score = 227 (85.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VY+ G+ + G
Sbjct: 1775 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 1833
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 1834 GLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 1891
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 1892 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 1947
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 1948 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 2007
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 2008 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 2059
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T+SG++YA+G D GQ G
Sbjct: 2060 VEGLR--GKKIVHVAV-GAL----HCLAVTDSGQVYAWGDNDHGQQG 2099
Score = 154 (59.3 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 2988 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3047
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 3048 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 3095
Query: 346 TESGKLYA 353
+GKL A
Sbjct: 3096 ASAGKLPA 3103
Score = 138 (53.6 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 2723 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 2781
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 2782 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 2828
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 2829 SSEGEVYSWGEAEDGKLG 2846
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2090
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 2091 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 2133
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VYS CG
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--CG 1826
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G G G V P+ +T+L VV+ +S H ALT GK
Sbjct: 1827 EATN-GRL----GLGMSSGTVPIPRQITALSSY---VVKKVAVHS--GGRHATALTVDGK 1876
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 1877 VFSWGEGDDGKLG 1889
Score = 86 (35.3 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 2026 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2083
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 2084 SGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 2123
Score = 38 (18.4 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 2468 DGSVNGWGW 2476
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 274 (101.5 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 90/346 (26%), Positives = 151/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 2770 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 2827
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 2828 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 2886
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV + +G +Y+ D+
Sbjct: 2887 SPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 2941
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 2942 LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 3001
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 3002 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 3053
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3054 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3092
Score = 227 (85.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VY+ G+ + G
Sbjct: 1775 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 1833
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 1834 GLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 1891
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 1892 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 1947
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 1948 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 2007
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 2008 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 2059
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T+SG++YA+G D GQ G
Sbjct: 2060 VEGLR--GKKIVHVAV-GAL----HCLAVTDSGQVYAWGDNDHGQQG 2099
Score = 154 (59.3 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3024 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3083
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 3084 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 3131
Query: 346 TESGKLYA 353
+GKL A
Sbjct: 3132 ASAGKLPA 3139
Score = 138 (53.6 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 2759 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 2817
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 2818 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 2864
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 2865 SSEGEVYSWGEAEDGKLG 2882
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2090
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 2091 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 2133
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VYS CG
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--CG 1826
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G G G V P+ +T+L VV+ +S H ALT GK
Sbjct: 1827 EATN-GRL----GLGMSSGTVPIPRQITALSSY---VVKKVAVHS--GGRHATALTVDGK 1876
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 1877 VFSWGEGDDGKLG 1889
Score = 86 (35.3 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 2026 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2083
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 2084 SGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 2123
Score = 38 (18.4 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 2504 DGSVNGWGW 2512
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 90/346 (26%), Positives = 151/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3960 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 4017
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 4018 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4076
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV + +G +Y+ D+
Sbjct: 4077 SPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 4131
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4132 LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4191
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4192 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4243
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4244 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 232 (86.7 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 76/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 3025 GLGISSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3082
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 3083 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3138
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3139 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3198
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 3199 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 3250
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T+SG++YA+G D GQ G
Sbjct: 3251 VEGLR--GKKIVHVAV-GAL----HCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 223 (83.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 92/373 (24%), Positives = 156/373 (41%)
Query: 1 MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGT---PLYCRSLXXXXXXXXXXXXX 57
+ATP SP + E G L+G + P+ C L
Sbjct: 403 LATPCMPPLCSSPTSHKGSLQEVIGW-GLIGWKYYANVIGPIQCEGLANLGVTQIACAEK 461
Query: 58 XTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQA-AIGNFF 112
+++S G+VY A+ D+ +PQLV+ L +NI + A + G+ +
Sbjct: 462 RFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASRNIVKIAAHSDGHHY 507
Query: 113 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL---GTLENIPVVQIXXXXXXXXX 168
A L+ G VY++ G+ RLGH T P + EP + G VV I
Sbjct: 508 LA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 169 XXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQ 228
+ +Y+ S DE P L+ + L + +
Sbjct: 566 ITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 622
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G+V +WG G YG LG G + PK+++ L D+ + V G + +++DG VYS+G
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G++ LGH H V P+L+ L+ ++V+ ++ ++ H ALTE
Sbjct: 683 KGDNQRLGHGT------EEH--VRYPKLLEGLQ--GKKVIDVAAGST-----HCLALTED 727
Query: 349 GKLYAFGAGDKGQ 361
+++++G+ D+ Q
Sbjct: 728 SEVHSWGSNDQCQ 740
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 50/137 (36%), Positives = 79/137 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E E++P +V L +K I VA +GD T V+E+G V+S
Sbjct: 569 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 628
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ VV++ + + ALT
Sbjct: 629 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--VVKVRCGSQF-----SIALT 673
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y++G GD +LG
Sbjct: 674 KDGQVYSWGKGDNQRLG 690
Score = 180 (68.4 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 592
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV LK + +V+ ++ + +A T A+TE+G+++++G GD G+LG
Sbjct: 593 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGQVWSWGDGDYGKLG 638
Score = 154 (59.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 4274 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 4321
Query: 346 TESGKLYA 353
+GKL A
Sbjct: 4322 ASAGKLPA 4329
Score = 138 (53.6 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3949 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4007
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 4008 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 4054
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4055 SSEGEVYSWGEAEDGKLG 4072
Score = 127 (49.8 bits), Expect = 0.00058, P = 0.00058
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3282 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3324
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3217 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3275 SGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3314
Score = 42 (19.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2954 AATIRTKVFVWGLNDKDQLG 2973
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3694 DGSVNGWGW 3702
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 90/346 (26%), Positives = 151/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3963 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 4020
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 4021 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4079
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV + +G +Y+ D+
Sbjct: 4080 SPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 4134
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4135 LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4194
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4195 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4246
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4247 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 227 (85.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 3026 GLGLSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3083
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 3084 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3139
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3140 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3199
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 3200 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 3251
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T++G++YA+G D GQ G
Sbjct: 3252 VEGLR--GKKIVHVAV-GAL----HCLAVTDAGQVYAWGDNDHGQQG 3291
Score = 223 (83.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 92/373 (24%), Positives = 156/373 (41%)
Query: 1 MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGT---PLYCRSLXXXXXXXXXXXXX 57
+ATP SP + E G L+G + P+ C L
Sbjct: 404 LATPCMPPLCSSPTSHKGSLQEVIGW-GLIGWKYYANVIGPIQCEGLANLGVTQIACAEK 462
Query: 58 XTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQA-AIGNFF 112
+++S G+VY A+ D+ +PQLV+ L +NI + A + G+ +
Sbjct: 463 RFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASRNIVKIAAHSDGHHY 508
Query: 113 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL---GTLENIPVVQIXXXXXXXXX 168
A L+ G VY++ G+ RLGH T P + EP + G VV I
Sbjct: 509 LA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 169 XXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQ 228
+ +Y+ S DE P L+ + L + +
Sbjct: 567 ITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G+V +WG G YG LG G + PK+++ L D+ + V G + +++DG VYS+G
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G++ LGH H V P+L+ L+ ++V+ ++ ++ H ALTE
Sbjct: 684 KGDNQRLGHGT------EEH--VRYPKLLEGLQ--GKKVIDVAAGST-----HCLALTED 728
Query: 349 GKLYAFGAGDKGQ 361
+++++G+ D+ Q
Sbjct: 729 SEVHSWGSNDQCQ 741
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 50/137 (36%), Positives = 79/137 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E E++P +V L +K I VA +GD T V+E+G V+S
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 629
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ VV++ + + ALT
Sbjct: 630 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--VVKVRCGSQF-----SIALT 674
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y++G GD +LG
Sbjct: 675 KDGQVYSWGKGDNQRLG 691
Score = 180 (68.4 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 593
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV LK + +V+ ++ + +A T A+TE+G+++++G GD G+LG
Sbjct: 594 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGQVWSWGDGDYGKLG 639
Score = 154 (59.3 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 4277 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 4324
Query: 346 TESGKLYA 353
+GKL A
Sbjct: 4325 ASAGKLPA 4332
Score = 138 (53.6 bits), Expect = 9.7e-08, Sum P(3) = 9.7e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3952 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4010
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 4011 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 4057
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4058 SSEGEVYSWGEAEDGKLG 4075
Score = 125 (49.1 bits), Expect = 0.00096, P = 0.00096
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3283 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3325
Score = 85 (35.0 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3218 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3276 AGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3315
Score = 42 (19.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2955 AATIRTKVFVWGLNDKDQLG 2974
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3697 DGSVNGWGW 3705
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 274 (101.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 90/346 (26%), Positives = 151/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3905 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 3962
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 3963 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4021
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV + +G +Y+ D+
Sbjct: 4022 SPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 4076
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4077 LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4136
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4137 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4188
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4189 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4227
Score = 227 (85.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VY+ G+ + G
Sbjct: 2910 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 2968
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 2969 GLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3026
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 3027 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3082
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3083 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3142
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 3143 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 3194
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T+SG++YA+G D GQ G
Sbjct: 3195 VEGLR--GKKIVHVAV-GAL----HCLAVTDSGQVYAWGDNDHGQQG 3234
Score = 223 (83.6 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 75/278 (26%), Positives = 127/278 (45%)
Query: 91 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 146
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 429 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 486
Query: 147 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 203
+ G VV I + +Y+ S DE P L+
Sbjct: 487 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 543
Query: 204 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603
Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
I V G + +++DG VYS+G G++ LGH H V P+L+ L+
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT------EEH--VRYPKLLEGLQ-- 653
Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
++V+ ++ ++ H ALTE +++++G+ D+ Q
Sbjct: 654 GKKVIDVAAGST-----HCLALTEDSEVHSWGSNDQCQ 686
Score = 203 (76.5 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 49/137 (35%), Positives = 79/137 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E E++P +V L +K I VA +GD T V+E+G V+S
Sbjct: 515 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 574
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ V+++ + + ALT
Sbjct: 575 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--VIKVRCGSQF-----SIALT 619
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y++G GD +LG
Sbjct: 620 KDGQVYSWGKGDNQRLG 636
Score = 179 (68.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 425 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 484
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 485 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 538
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV LK + +V+ ++ + +A T A+TE+G+++++G GD G+LG
Sbjct: 539 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGQVWSWGDGDYGKLG 584
Score = 154 (59.3 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4159 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4218
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 4219 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 4266
Query: 346 TESGKLYA 353
+GKL A
Sbjct: 4267 ASAGKLPA 4274
Score = 144 (55.7 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 31/101 (30%), Positives = 63/101 (62%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ +++ GQV+++G +G+ G G+ +P+L+E L+++ V++ G+ F+ L++
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 620
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 660
Score = 138 (53.6 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3894 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 3952
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 3953 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 3999
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4000 SSEGEVYSWGEAEDGKLG 4017
Score = 127 (49.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3226 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3268
Score = 127 (49.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VYS CG
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--CG 2961
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G G G V P+ +T+L VV+ +S H ALT GK
Sbjct: 2962 EATN-GRL----GLGMSSGTVPIPRQITALSSY---VVKKVAVHS--GGRHATALTVDGK 3011
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 3012 VFSWGEGDDGKLG 3024
Score = 89 (36.4 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+
Sbjct: 615 SIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHP 146
+ V+ SWG++ + H +P P
Sbjct: 673 DSEVH--SWGSNDQCQHFDTLRVTKPEP 698
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3161 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3218
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3219 SGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3258
Score = 74 (31.1 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 29/85 (34%), Positives = 37/85 (43%)
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
+D + + G G GHN G A V P +L + R VQ+ I
Sbjct: 3887 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL--RPVQL-----IGGE 3939
Query: 340 AHTFALTESGKLYAFGAGDKGQLGI 364
FA+T GKLYA G G G+LGI
Sbjct: 3940 QTLFAVTADGKLYATGYGAGGRLGI 3964
Score = 67 (28.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 81 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G+ G K V P E L ++ V+Q A +LSR GRVYT ++ +D
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD 426
Score = 57 (25.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
G + + + P +L +N VVQ++ + FA+T GK+Y+ G G+LG+
Sbjct: 2918 GLKGSKIKVPSFSETLSALN--VVQVAGGSK-----SLFAVTVEGKVYSCGEATNGRLGL 2970
Score = 38 (18.4 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3639 DGSVNGWGW 3647
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 274 (101.5 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 90/346 (26%), Positives = 151/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3962 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 4019
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 4020 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4078
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV + +G +Y+ D+
Sbjct: 4079 SPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 4133
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4134 LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4193
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4194 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4245
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4246 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 227 (85.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VY+ G+ + G
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 3026 GLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3083
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 3084 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3139
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3140 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3199
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 3200 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 3251
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T+SG++YA+G D GQ G
Sbjct: 3252 VEGLR--GKKIVHVAV-GAL----HCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 223 (83.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 75/278 (26%), Positives = 127/278 (45%)
Query: 91 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 146
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 541
Query: 147 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 203
+ G VV I + +Y+ S DE P L+
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 204 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
I V G + +++DG VYS+G G++ LGH H V P+L+ L+
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT------EEH--VRYPKLLEGLQ-- 708
Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
++V+ ++ ++ H ALTE +++++G+ D+ Q
Sbjct: 709 GKKVIDVAAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 203 (76.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 49/137 (35%), Positives = 79/137 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E E++P +V L +K I VA +GD T V+E+G V+S
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 629
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ V+++ + + ALT
Sbjct: 630 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--VIKVRCGSQF-----SIALT 674
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y++G GD +LG
Sbjct: 675 KDGQVYSWGKGDNQRLG 691
Score = 179 (68.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 480 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 593
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV LK + +V+ ++ + +A T A+TE+G+++++G GD G+LG
Sbjct: 594 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGQVWSWGDGDYGKLG 639
Score = 154 (59.3 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 4276 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 4323
Query: 346 TESGKLYA 353
+GKL A
Sbjct: 4324 ASAGKLPA 4331
Score = 144 (55.7 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 31/101 (30%), Positives = 63/101 (62%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ +++ GQV+++G +G+ G G+ +P+L+E L+++ V++ G+ F+ L++
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Score = 138 (53.6 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3951 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4009
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 4010 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 4056
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4057 SSEGEVYSWGEAEDGKLG 4074
Score = 127 (49.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3283 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3325
Score = 127 (49.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VYS CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--CG 3018
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G G G V P+ +T+L VV+ +S H ALT GK
Sbjct: 3019 EATN-GRL----GLGMSSGTVPIPRQITALSSY---VVKKVAVHS--GGRHATALTVDGK 3068
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 3069 VFSWGEGDDGKLG 3081
Score = 90 (36.7 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
+ V+ SWG++ + H +P P L L++ +V I
Sbjct: 728 DSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGI 767
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3218 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3276 SGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3315
Score = 74 (31.1 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 29/85 (34%), Positives = 37/85 (43%)
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
+D + + G G GHN G A V P +L + R VQ+ I
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL--RPVQL-----IGGE 3996
Query: 340 AHTFALTESGKLYAFGAGDKGQLGI 364
FA+T GKLYA G G G+LGI
Sbjct: 3997 QTLFAVTADGKLYATGYGAGGRLGI 4021
Score = 67 (28.6 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 81 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G+ G K V P E L ++ V+Q A +LSR GRVYT ++ +D
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD 481
Score = 57 (25.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
G + + + P +L +N VVQ++ + FA+T GK+Y+ G G+LG+
Sbjct: 2975 GLKGSKIKVPSFSETLSALN--VVQVAGGSK-----SLFAVTVEGKVYSCGEATNGRLGL 3027
Score = 38 (18.4 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3696 DGSVNGWGW 3704
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 268 (99.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 91/348 (26%), Positives = 152/348 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3965 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 4022
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 4023 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4081
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV I +G +++ D+
Sbjct: 4082 SPCD-RPR-VIESLRGIEVVDIAAGGAHSACITA--AG-DLFTWGKGRYGRLGHGDSEDQ 4136
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L D+ + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4197 DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4248
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESG--KLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G ++Y +G D+GQLG
Sbjct: 4249 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGLGEVYTWGDNDEGQLG 4289
Score = 232 (86.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 87/337 (25%), Positives = 147/337 (43%)
Query: 34 VNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTS 91
V+G P+ C L +++S G+VY A+ D+ G
Sbjct: 440 VSG-PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG-------------- 484
Query: 92 PQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPH-- 145
PQLV+SL +NI + A + G+ + A LS G V+++ G+ RLGH T P + EP
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLA-LSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLI 542
Query: 146 -PLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIE 204
L G VV I + +Y+ S D+ P L+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVT 599
Query: 205 QFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 600 GLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
+ V G + +++DG VY++G G++ LGH H V P+L+ LK
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT------EEH--VRYPKLLEGLK--G 709
Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
++V+ ++ ++ H ALTE +++++G+ D+ Q
Sbjct: 710 KKVIDVAAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 231 (86.4 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 77/347 (22%), Positives = 152/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L N V + A+ G L+ +G+++++ G+D +LGH
Sbjct: 3029 GLGISSGT--VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHF 3086
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P L+ L+ + I SG +Y+ T
Sbjct: 3087 SRMNCDKPR-LIEALKTKRIRDIACGSSHSAAITS--SG-ELYTWGLGEYGRLGHGDNTT 3142
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH D +V PQ+
Sbjct: 3203 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--D------VHVRKPQV 3254
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T++G++YA+G D GQ G
Sbjct: 3255 VEGLR--GKKIVHVAV-GAL----HCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/137 (34%), Positives = 78/137 (56%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E +++P +V L +K I V+ +GD T V+E+G V+S
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ +V++ + + ALT
Sbjct: 630 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--IVKVRCGSQF-----SIALT 674
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y +G GD +LG
Sbjct: 675 KDGQVYTWGKGDNQRLG 691
Score = 193 (73.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/173 (28%), Positives = 87/173 (50%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ +G V +WG G G LGHG+ P
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEP 539
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 540 KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT------ 593
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LVT LK + +V+ +S + +A T A+TE+G+++++G GD G+LG
Sbjct: 594 --IPMLVTGLKGL--KVIDVSCGSG---DAQTLAVTENGQVWSWGDGDYGKLG 639
Score = 138 (53.6 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3954 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4012
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 4013 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 4059
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4060 SSEGEVYSWGEAEDGKLG 4077
Score = 129 (50.5 bits), Expect = 0.00035, P = 0.00035
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VY+ CG
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--CG 3021
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G + G V P+ +T+L N V ++++ + H ALT GK
Sbjct: 3022 EATN-GRLGLGISSGT----VPIPRQITALS--NYVVKKVAVHSG---GRHAMALTVDGK 3071
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 3072 IFSWGEGDDGKLG 3084
Score = 125 (49.1 bits), Expect = 0.00096, P = 0.00096
Identities = 36/111 (32%), Positives = 50/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3286 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3328
Score = 86 (35.3 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3221 SLALTKSGVVWTWGKGDYFRLGHGTDVH--VRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3279 TGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3318
Score = 42 (19.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2958 AATIRTKVFVWGLNDKDQLG 2977
Score = 38 (18.4 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 268 (99.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 91/348 (26%), Positives = 152/348 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3965 NHRGQLGGIEGAKVK-VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 4022
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 4023 -GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4081
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L I VV I +G +++ D+
Sbjct: 4082 SPCD-RPR-VIESLRGIEVVDIAAGGAHSACITA--AG-DLFTWGKGRYGRLGHGDSEDQ 4136
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L D+ + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4197 DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4248
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESG--KLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H TE G ++Y +G D+GQLG
Sbjct: 4249 QGLQ--GKKVIAIA-TGSL----HCVCCTEDGLGEVYTWGDNDEGQLG 4289
Score = 232 (86.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 87/337 (25%), Positives = 147/337 (43%)
Query: 34 VNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTS 91
V+G P+ C L +++S G+VY A+ D+ G
Sbjct: 440 VSG-PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG-------------- 484
Query: 92 PQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPH-- 145
PQLV+SL +NI + A + G+ + A LS G V+++ G+ RLGH T P + EP
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLA-LSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLI 542
Query: 146 -PLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIE 204
L G VV I + +Y+ S D+ P L+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVT 599
Query: 205 QFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 600 GLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
+ V G + +++DG VY++G G++ LGH H V P+L+ LK
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT------EEH--VRYPKLLEGLK--G 709
Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
++V+ ++ ++ H ALTE +++++G+ D+ Q
Sbjct: 710 KKVIDVAAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 231 (86.4 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 77/347 (22%), Positives = 152/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L N V + A+ G L+ +G+++++ G+D +LGH
Sbjct: 3029 GLGISSGT--VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHF 3086
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P L+ L+ + I SG +Y+ T
Sbjct: 3087 SRMNCDKPR-LIEALKTKRIRDIACGSSHSAAITS--SG-ELYTWGLGEYGRLGHGDNTT 3142
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH D +V PQ+
Sbjct: 3203 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--D------VHVRKPQV 3254
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T++G++YA+G D GQ G
Sbjct: 3255 VEGLR--GKKIVHVAV-GAL----HCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/137 (34%), Positives = 78/137 (56%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E +++P +V L +K I V+ +GD T V+E+G V+S
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ +V++ + + ALT
Sbjct: 630 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--IVKVRCGSQF-----SIALT 674
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y +G GD +LG
Sbjct: 675 KDGQVYTWGKGDNQRLG 691
Score = 193 (73.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/173 (28%), Positives = 87/173 (50%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ +G V +WG G G LGHG+ P
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEP 539
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 540 KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT------ 593
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LVT LK + +V+ +S + +A T A+TE+G+++++G GD G+LG
Sbjct: 594 --IPMLVTGLKGL--KVIDVSCGSG---DAQTLAVTENGQVWSWGDGDYGKLG 639
Score = 138 (53.6 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3954 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4012
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 4013 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 4059
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4060 SSEGEVYSWGEAEDGKLG 4077
Score = 129 (50.5 bits), Expect = 0.00035, P = 0.00035
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VY+ CG
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--CG 3021
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G + G V P+ +T+L N V ++++ + H ALT GK
Sbjct: 3022 EATN-GRLGLGISSGT----VPIPRQITALS--NYVVKKVAVHSG---GRHAMALTVDGK 3071
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 3072 IFSWGEGDDGKLG 3084
Score = 125 (49.1 bits), Expect = 0.00096, P = 0.00096
Identities = 36/111 (32%), Positives = 50/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3286 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3328
Score = 86 (35.3 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3221 SLALTKSGVVWTWGKGDYFRLGHGTDVH--VRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3279 TGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3318
Score = 42 (19.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2958 AATIRTKVFVWGLNDKDQLG 2977
Score = 38 (18.4 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 199 (75.1 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 46/136 (33%), Positives = 75/136 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG + WG YG LG G+ + S P VQ L+D+ + +A G + + ++ +G+VY +
Sbjct: 213 EDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGW 272
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G GE LG G ++ + +L PQ V L E ++Q+S + H+ ALT
Sbjct: 273 GRGEHGRLGF-----GDNDKSSKML-PQKVNLL--AGEDIIQVSCGGT-----HSVALTR 319
Query: 348 SGKLYAFGAGDKGQLG 363
G++++FG GD G+LG
Sbjct: 320 DGRIFSFGRGDHGRLG 335
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 47/150 (31%), Positives = 71/150 (47%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG G G LG G +E + + VV AL V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
+LGH + TP LV SL N ++VQ ++ W H A+ + G+
Sbjct: 67 RGTLGHPPETKTES-------TPSLVKSL--ANVKIVQAAIGG---W--HCLAVDDQGRA 112
Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
YA+G + GQ G E ++T G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG++ TWGW + G LGH E + ES P +V++L +VK + A G + V + G Y++
Sbjct: 56 DGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAW 115
Query: 288 GCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
G E G D G +++ P+ +Q+ R V T+S+ LT
Sbjct: 116 GGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSV-------VLT 166
Query: 347 ESGKLYAFGA----GDKGQLGI 364
G ++ +G GD Q+ +
Sbjct: 167 REGYVWTWGQPWPPGDIKQISV 188
Score = 118 (46.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 46/156 (29%), Positives = 76/156 (48%)
Query: 228 QDGRVCTWG--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G V TWG W G+ + SVP VQ L +V+ I A G + + EDG ++
Sbjct: 167 REGYVWTWGQPWPP------GDIKQISVPVRVQGLENVRLI--AVGAFHNLALKEDGTLW 218
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
++G E LG D Q + P V L + +V I+ W H+ AL
Sbjct: 219 AWGNNEYGQLG---TGDTQPRSY-----PIPVQGLDDLT--LVDIAAGG---W--HSTAL 263
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
T G++Y +G G+ G+LG N+++ + P++V++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFG-DNDKSSKMLPQKVNL 298
Score = 109 (43.4 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 287 FGCGESASLGHNA-IADGQ 304
FG G+ LG+ + GQ
Sbjct: 326 FGRGDHGRLGYGRKVTTGQ 344
Score = 108 (43.1 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ I D G+++ +G + G + + TK ++P LV+SL N+ +VQAAIG + +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGGWHCLAVDD 108
Query: 119 EGRVYTFSWGND 130
+GR Y +WG +
Sbjct: 109 QGRAY--AWGGN 118
Score = 91 (37.1 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV-LSREG 120
++ A V A+G G+ G K + S +V++L+ F V++ +G ++ + +G
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELAS--VVDALEP-FNVRSVVGGSRNSLAICDDG 57
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
+++T+ W LGH E L+ +L N+ +VQ
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQ 95
Score = 78 (32.5 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 33 EVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
+ TP +SL + + D G+ YA+G + +G+ G + +K T
Sbjct: 77 KTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC--GEEPSKDETGR 134
Query: 93 QLVESL-------KNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
+ + + + V Q A G + VL+REG V+T WG
Sbjct: 135 PVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT--WG 175
Score = 77 (32.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 87 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVE 143
K ++ P V+ L+N+ ++ A+G F L +G ++ +WGN+ +LG T+P
Sbjct: 184 KQISVPVRVQGLENVRLI--AVGAFHNLALKEDGTLW--AWGNNEYGQLGTGDTQPRSY- 238
Query: 144 PHPLLGTLENIPVVQI 159
P P+ G L+++ +V I
Sbjct: 239 PIPVQG-LDDLTLVDI 253
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP 254
+DGR+ ++G G +G LG+G + P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 267 (99.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 89/346 (25%), Positives = 150/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3883 NHRGQLGGIEGAKVK-VPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 3940
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
GV GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 3941 -GVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 3999
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L VV + +G +Y+ D+
Sbjct: 4000 SPCD-RPR-VIESLRGTEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 4054
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4055 LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4114
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4115 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4166
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H +E G++Y +G D+GQLG
Sbjct: 4167 QGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4205
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2887 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2945
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 2946 GLGISSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3003
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 3004 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3059
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3060 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3119
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 3120 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 3171
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T++G++YA+G D GQ G
Sbjct: 3172 VEGLR--GKKIVHVAV-GAL----HCLAVTDAGQVYAWGDNDHGQQG 3211
Score = 222 (83.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 92/373 (24%), Positives = 156/373 (41%)
Query: 1 MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGT---PLYCRSLXXXXXXXXXXXXX 57
+ATP SP + E G L+G + P+ C L
Sbjct: 314 LATPCMPPLCSSPTSHKGSLQEVIGW-GLIGWKYYANVIGPIQCEGLANLGVTQIACAEK 372
Query: 58 XTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQA-AIGNFF 112
+++S G+VY A+ D+ +PQLV+ L +NI + A + G+ +
Sbjct: 373 RFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASRNIVKIAAHSDGHHY 418
Query: 113 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL---GTLENIPVVQIXXXXXXXXX 168
A L+ G VY++ G+ RLGH T P + EP + G VV I
Sbjct: 419 LA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 169 XXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQ 228
+ +Y+ S DE P L+ + L + +
Sbjct: 477 ITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 533
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G+V +WG G YG LG G + PK+++ L D+ + V G + +++DG VYS+G
Sbjct: 534 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 593
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G++ LGH H V P+L+ L+ ++V+ ++ ++ H ALTE
Sbjct: 594 KGDNQRLGHGT------EEH--VRYPKLLEGLQ--GKKVIDVAAGST-----HCLALTED 638
Query: 349 GKLYAFGAGDKGQ 361
+++++G+ D+ Q
Sbjct: 639 SEVHSWGSNDQCQ 651
Score = 203 (76.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/137 (36%), Positives = 79/137 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E E++P +V L +K I VA +GD T V+E+G V+S
Sbjct: 480 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 539
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ VV++ + + ALT
Sbjct: 540 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--VVKVRCGSQF-----SVALT 584
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y++G GD +LG
Sbjct: 585 KDGQVYSWGKGDNQRLG 601
Score = 180 (68.4 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 390 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 449
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 450 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 503
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV LK + +V+ ++ + +A T A+TE+G+++++G GD G+LG
Sbjct: 504 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGQVWSWGDGDYGKLG 549
Score = 156 (60.0 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 45/126 (35%), Positives = 64/126 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++
Sbjct: 4137 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTW 4196
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 4197 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 4244
Query: 346 TESGKL 351
+GKL
Sbjct: 4245 ASAGKL 4250
Score = 137 (53.3 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3872 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLY 3930
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 3931 ATGYGAGGRLGVG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 3977
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 3978 SSEGEVYSWGEAEDGKLG 3995
Score = 125 (49.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 3143 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3202
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3203 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3245
Score = 123 (48.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 40/133 (30%), Positives = 62/133 (46%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VY+ CG
Sbjct: 2881 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--CG 2938
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G + G V P+ +T+L VV+ +S H ALT GK
Sbjct: 2939 EATN-GRLGLGISSGT----VPIPRQITALSSY---VVKKVAVHS--GGRHATALTVDGK 2988
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 2989 VFSWGEGDDGKLG 3001
Score = 89 (36.4 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+
Sbjct: 580 SVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 637
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHP 146
+ V+ SWG++ + H +P P
Sbjct: 638 DSEVH--SWGSNDQCQHFDTLRVTKPEP 663
Score = 85 (35.0 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3138 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3195
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3196 AGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3235
Score = 42 (19.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2875 AATIRTKVFVWGLNDKDQLG 2894
Score = 38 (18.4 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3617 DGSVNGWGW 3625
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 267 (99.0 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 89/346 (25%), Positives = 150/346 (43%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R + G +V P C +L ++ G++YA G + G
Sbjct: 3973 NHRGQLGGIEGAKVK-VPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRL- 4030
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-HT 137
GV GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH +
Sbjct: 4031 -GVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 4089
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
P D P ++ +L VV + +G +Y+ D+
Sbjct: 4090 SPCD-RPR-VIESLRGTEVVDVAAGGAHSACVTA--AG-DLYTWGKGRYGRLGHSDSEDQ 4144
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+E Q + D V +WG G YG LG G + VP +
Sbjct: 4145 LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4204
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+L + + V G + +++ G VY++G G+ LGH + + H V P+ V
Sbjct: 4205 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS------DDH--VRRPRQV 4256
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ ++V+ I+ T S+ H +E G++Y +G D+GQLG
Sbjct: 4257 QGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4295
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 75/347 (21%), Positives = 151/347 (43%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2977 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3035
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 3036 GLGISSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3093
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P +E + +I S +Y+ T
Sbjct: 3094 SRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3149
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P++++ + +G V +WG G +G LG G E ++P+
Sbjct: 3150 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3209
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH + D +V PQ+
Sbjct: 3210 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--D------VHVRKPQV 3261
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V L+ +++V +++ ++ H A+T++G++YA+G D GQ G
Sbjct: 3262 VEGLR--GKKIVHVAV-GAL----HCLAVTDAGQVYAWGDNDHGQQG 3301
Score = 222 (83.2 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 92/373 (24%), Positives = 156/373 (41%)
Query: 1 MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGT---PLYCRSLXXXXXXXXXXXXX 57
+ATP SP + E G L+G + P+ C L
Sbjct: 404 LATPCMPPLCSSPTSHKGSLQEVIGW-GLIGWKYYANVIGPIQCEGLANLGVTQIACAEK 462
Query: 58 XTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQA-AIGNFF 112
+++S G+VY A+ D+ +PQLV+ L +NI + A + G+ +
Sbjct: 463 RFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASRNIVKIAAHSDGHHY 508
Query: 113 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL---GTLENIPVVQIXXXXXXXXX 168
A L+ G VY++ G+ RLGH T P + EP + G VV I
Sbjct: 509 LA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 169 XXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQ 228
+ +Y+ S DE P L+ + L + +
Sbjct: 567 ITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G+V +WG G YG LG G + PK+++ L D+ + V G + +++DG VYS+G
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G++ LGH H V P+L+ L+ ++V+ ++ ++ H ALTE
Sbjct: 684 KGDNQRLGHGT------EEH--VRYPKLLEGLQ--GKKVIDVAAGST-----HCLALTED 728
Query: 349 GKLYAFGAGDKGQ 361
+++++G+ D+ Q
Sbjct: 729 SEVHSWGSNDQCQ 741
Score = 203 (76.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/137 (36%), Positives = 79/137 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYS 286
+G + TWG G YG LGHG+ E E++P +V L +K I VA +GD T V+E+G V+S
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 629
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G+ LG +DG TP+L+ L+ ++ VV++ + + ALT
Sbjct: 630 WGDGDYGKLGRGG-SDG-------CKTPKLIEKLQDLD--VVKVRCGSQF-----SVALT 674
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G++Y++G GD +LG
Sbjct: 675 KDGQVYSWGKGDNQRLG 691
Score = 180 (68.4 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 593
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV LK + +V+ ++ + +A T A+TE+G+++++G GD G+LG
Sbjct: 594 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGQVWSWGDGDYGKLG 639
Score = 156 (60.0 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 45/126 (35%), Positives = 64/126 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++
Sbjct: 4227 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTW 4286
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K+VN V +++ W+ T
Sbjct: 4287 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKVNR--VACGSAHTLAWS--TSKP 4334
Query: 346 TESGKL 351
+GKL
Sbjct: 4335 ASAGKL 4340
Score = 137 (53.3 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3962 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLY 4020
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V + V + NS H AL
Sbjct: 4021 ATGYGAGGRLGVG------GTE--SVSTPTLLESIQHVFIKKVAV---NS--GGKHCLAL 4067
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G++Y++G + G+LG
Sbjct: 4068 SSEGEVYSWGEAEDGKLG 4085
Score = 125 (49.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++
Sbjct: 3233 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3292
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G + H G G N P LV L+ V ++S+ W
Sbjct: 3293 GDND-----HGQ--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3335
Score = 123 (48.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 40/133 (30%), Positives = 62/133 (46%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+V WG LG VP + L+ + + VA G + F V+ +G VY+ CG
Sbjct: 2971 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--CG 3028
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
E+ + G + G V P+ +T+L VV+ +S H ALT GK
Sbjct: 3029 EATN-GRLGLGISSGT----VPIPRQITALSSY---VVKKVAVHS--GGRHATALTVDGK 3078
Query: 351 LYAFGAGDKGQLG 363
++++G GD G+LG
Sbjct: 3079 VFSWGEGDDGKLG 3091
Score = 89 (36.4 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHP 146
+ V+ SWG++ + H +P P
Sbjct: 728 DSEVH--SWGSNDQCQHFDTLRVTKPEP 753
Score = 85 (35.0 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ +G V+ +GK + +G V PQ+VE L+ +V A+G ++
Sbjct: 3228 SLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3285
Query: 119 EGRVYTFSWG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G+VY +WG ND + G+ T + +P + G LE + ++
Sbjct: 3286 AGQVY--AWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3325
Score = 42 (19.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2965 AATIRTKVFVWGLNDKDQLG 2984
Score = 38 (18.4 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3707 DGSVNGWGW 3715
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 265 (98.3 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 83/301 (27%), Positives = 139/301 (46%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 123
G++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG +Y
Sbjct: 4002 GKLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELY 4059
Query: 124 TFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 182
++ D +LGH + P D P ++ +L + VV I SG +Y+
Sbjct: 4060 SWGEAEDGKLGHGNRSPCD-RPR-VIESLRGVEVVDIAAGGAHSACITA--SG-ELYTWG 4114
Query: 183 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 242
D+ P+L+E Q + D V +WG G YG
Sbjct: 4115 KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4174
Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
LG G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4175 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--- 4231
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
+ H V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQL
Sbjct: 4232 ---DDH--VRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQL 4279
Query: 363 G 363
G
Sbjct: 4280 G 4280
Score = 235 (87.8 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 86/343 (25%), Positives = 151/343 (44%)
Query: 34 VNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
VNG P+ C++L ++++ G VY Y + T L +P
Sbjct: 429 VNG-PIQCKALSNLGVTQIVCSEKGFLILTITGAVYT--------QNY--KSTTL--APM 475
Query: 94 LVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
LV +L + +++ A G + A LS G V+++ G+ RLGH EP ++
Sbjct: 476 LVHALTSRKIMKLAAHPDGQHYLA-LSVNGEVFSWGCGDGGRLGHGDTTYLEEP-TMISV 533
Query: 151 LENIPV-VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL 209
PV Q+ + +++ S D+ P L+ + L
Sbjct: 534 FSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGL 593
Query: 210 NLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
+ ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 594 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 653
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
G + +++DG VY++G G++ LGH + H V P+L+ SL+ +RVV
Sbjct: 654 CGSQFSVALTKDGQVYTWGKGDNQRLGHGT------DEH--VRYPKLLDSLQ--GKRVVD 703
Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
I++ ++ H ALTE G+++++G+ DK Q L +N+ +
Sbjct: 704 IAVGST-----HCLALTEEGEVHSWGSNDKLQHFDTLFSNKKQ 741
Score = 222 (83.2 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 82/303 (27%), Positives = 130/303 (42%)
Query: 67 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
+V+ +G KD G G++G+K+ P E+L + VVQ A G+ ++ EG+VY
Sbjct: 2956 KVFVWGLNDKDQLG----GLKGSKIKV-PSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3010
Query: 124 TFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 182
+ RLG + P P + L N V ++ G V+S
Sbjct: 3011 ACGEATNGRLGLGLSSGTI-PIPRQISALSNYVVKKVAVHSGGRHAMALTVDGK-VFSWG 3068
Query: 183 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 242
SR + PRLIE + ++ G + +WG G YG
Sbjct: 3069 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS--GELYSWGLGEYGR 3126
Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAI 300
LGHG+ + PK+V+ L + + VA G D T ++++G V+S+G G+ LG
Sbjct: 3127 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-- 3184
Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
G+ N+ PQ + L + V QI + ALT+SG ++ +G GD
Sbjct: 3185 ----GSEGCNI--PQNIERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWGKGDYF 3231
Query: 361 QLG 363
+LG
Sbjct: 3232 RLG 3234
Score = 216 (81.1 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 68/248 (27%), Positives = 112/248 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ +G +Y +G + G+ G++G K V P E+L + VQ G ++
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLG-GIEGAK-VKVPTPTEALATLRPVQLIGGEQTLFAVTA 4000
Query: 119 EGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G++Y +G RLG TE V LL +++++ + ++ G
Sbjct: 4001 DGKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG-E 4057
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
+YS +R+ PR+IE L ++ G + TWG
Sbjct: 4058 LYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGVEVVDIAAGGAHSACITASGELYTWGK 4115
Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASL 295
GRYG LGHG+ E + PK+V+AL + I VA +GD T +++D V+S+G G+ L
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4175
Query: 296 GHNAIADG 303
G +DG
Sbjct: 4176 GRGG-SDG 4182
Score = 197 (74.4 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 67/316 (21%), Positives = 132/316 (41%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L ++ G+VYA G+ + G
Sbjct: 2962 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRL 3020
Query: 80 EYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
G+ GT + P+ + +L N V + A+ G L+ +G+V+++ G+D +LGH
Sbjct: 3021 GLGLSSGT--IPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHF 3078
Query: 137 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 196
+ N +P L+ L+ + I SG +YS T
Sbjct: 3079 SRMNCDKPR-LIEALKTKRIRDIACGSSHSAAITS--SG-ELYSWGLGEYGRLGHGDNTT 3134
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
+ P+L++ + +G V +WG G +G LG G E ++P+
Sbjct: 3135 QLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQN 3194
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
++ LN + G + +++ G V+++G G+ LGH +V PQ+
Sbjct: 3195 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQM 3246
Query: 317 VTSLKQVNERVVQISL 332
V L+ +++V +++
Sbjct: 3247 VEGLR--GKKIVHVAV 3260
Score = 184 (69.8 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 72/280 (25%), Positives = 112/280 (40%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
M ++ G+V+++G+ G+ G P+L+E+LK + A G+ +A ++
Sbjct: 3056 MALTVDGKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3113
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 179
G +Y++ G RLGH + P L+ L VVQ+ GM V+
Sbjct: 3114 GELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVVQVACGSRDAQTLALTDEGM-VF 3171
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWG 238
S P+ IE+ LN Q + G V TWG G
Sbjct: 3172 SWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3228
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
Y LGHG + P++V+ L K +HVA G V+E G V+++G + H
Sbjct: 3229 DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDND-----HG 3283
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
G G N P LV L+ V ++S+ W
Sbjct: 3284 Q--QGNGTTTVN-RKPTLVQGLEGQKITRVACGSSHSVAW 3320
Score = 158 (60.7 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 45/128 (35%), Positives = 66/128 (51%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4212 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4271
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFAL 345
G + LG DG N + P+LV +L K++N V +++ W+ T
Sbjct: 4272 GDNDEGQLG-----DGTTNA---IQRPRLVAALQGKKINR--VACGSAHTLAWS--TSKP 4319
Query: 346 TESGKLYA 353
T +GKL A
Sbjct: 4320 TNAGKLPA 4327
Score = 155 (59.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 48/158 (30%), Positives = 76/158 (48%)
Query: 208 LLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 265
L L+P DG++ G+G G LG G E S P +++++ V +
Sbjct: 3980 LATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK 4039
Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
+ V +G +S +G++YS+G E LGH GNR + P+++ SL+ V
Sbjct: 4040 VAVNSGGKHCLALSSEGELYSWGEAEDGKLGH-------GNR-SPCDRPRVIESLRGVE- 4090
Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
VV I+ AH+ +T SG+LY +G G G+LG
Sbjct: 4091 -VVDIAAGG-----AHSACITASGELYTWGKGRYGRLG 4122
Score = 152 (58.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 38/135 (28%), Positives = 72/135 (53%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G V +WG G +G LG G E ++P+ ++ LN + G + +++ G V+++G
Sbjct: 3167 EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3226
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G+ LGH +V PQ+V L+ +++V +++ ++ H A+TE+
Sbjct: 3227 KGDYFRLGHGT--------DVHVRKPQMVEGLR--GKKIVHVAV-GAL----HCLAVTET 3271
Query: 349 GKLYAFGAGDKGQLG 363
G+++A+G D GQ G
Sbjct: 3272 GQVFAWGDNDHGQQG 3286
Score = 145 (56.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G G + WG G LG G E + VP +AL ++ + + G+ T F V+ DG +Y
Sbjct: 3947 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLY 4005
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+ G G LG G +V TP L+ S++ V R V + NS H AL
Sbjct: 4006 ATGYGAGGRLGIG------GTE--SVSTPTLLESIQHVFIRKVAV---NS--GGKHCLAL 4052
Query: 346 TESGKLYAFGAGDKGQLG 363
+ G+LY++G + G+LG
Sbjct: 4053 SSEGELYSWGEAEDGKLG 4070
Score = 128 (50.1 bits), Expect = 0.00045, P = 0.00045
Identities = 55/220 (25%), Positives = 88/220 (40%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 119
I+ +G++Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4104 ITASGELYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGHRVIDVACGSGDAQTLCLTDD 4161
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 179
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4162 DMVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4217
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
+ S + PR ++ Q + +DG V TWG
Sbjct: 4218 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4275
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
G LG G P++V AL K VA G T S
Sbjct: 4276 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4315
Score = 42 (19.8 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 344 ALTESGKLYAFGAGDKGQLG 363
A T K++ +G DK QLG
Sbjct: 2950 AATIRTKVFVWGLNDKDQLG 2969
Score = 38 (18.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 229 DGRVCTWGW 237
DG V WGW
Sbjct: 3692 DGSVNGWGW 3700
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 204 (76.9 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 47/136 (34%), Positives = 77/136 (56%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DGR+ WG YG LG G+ + S P VQ L+D+ + +A G + + +++ G+VY +
Sbjct: 213 EDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGW 272
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G GE LG + D N ++ + PQ V L + E ++Q+S + H+ ALT
Sbjct: 273 GRGEHGRLG---LGD---NDKSSKMVPQKVNLLAE--EDIIQVSCGGT-----HSVALTR 319
Query: 348 SGKLYAFGAGDKGQLG 363
G++++FG GD G+LG
Sbjct: 320 DGRIFSFGRGDHGRLG 335
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/150 (28%), Positives = 70/150 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
+ WG G G LG G E + VV+AL V +G + + +DG ++++G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
+LGH + N+ P V +L N ++ Q ++ W H A+ + G+
Sbjct: 67 RGTLGHQP-----ETKTENI--PSRVKAL--ANVKITQAAIGG---W--HCLAVDDQGRA 112
Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
YA+G + GQ G E + + E G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG + TWGW + G LGH E + E++P V+AL +VK A G + V + G Y++
Sbjct: 56 DGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAW 115
Query: 288 GCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
G E G + D G +++ P+ V Q++ + H+ LT
Sbjct: 116 GGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR----QVAAGGT-----HSVVLT 166
Query: 347 ESGKLYAFGA----GDKGQLGI 364
G ++ +G GD Q+ +
Sbjct: 167 REGHVWTWGQPWPPGDIKQISV 188
Score = 111 (44.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 230 GRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
G V WG G +G LG G+ + S VP+ V L + I V+ G + ++ DG ++SF
Sbjct: 267 GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 288 GCGESASLGHNA-IADGQ 304
G G+ LG+ + GQ
Sbjct: 327 GRGDHGRLGYGRKVTTGQ 344
Score = 99 (39.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
+A G + + EDG + ++G E LG D Q H P V L + +
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLG---TGDTQPTSH-----PVPVQGLDDLT--L 250
Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
V I+ W H+ ALT+ G++Y +G G+ G+LG+ N+++ + P++V++
Sbjct: 251 VDIAAGG---W--HSTALTDKGEVYGWGRGEHGRLGLG-DNDKSSKMVPQKVNL 298
Score = 89 (36.4 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ I D G ++ +G + G + + TK P V++L N+ + QAAIG + +
Sbjct: 50 SLAICDDGTMFTWGWNQRGTLGHQPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDD 108
Query: 119 EGRVYTFSWGND 130
+GR Y +WG +
Sbjct: 109 QGRAY--AWGGN 118
Score = 82 (33.9 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 87 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVE 143
K ++ P V+ L+N+ ++ A+G F L +GR+ +WGN+ +LG T+P
Sbjct: 184 KQISVPVRVQGLENVRLI--AVGAFHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTS-H 238
Query: 144 PHPLLGTLENIPVVQI 159
P P+ G L+++ +V I
Sbjct: 239 PVPVQG-LDDLTLVDI 253
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 228 QDGRVCTWG--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G V TWG W G+ + SVP VQ L +V+ I A G + + EDG +
Sbjct: 167 REGHVWTWGQPWPP------GDIKQISVPVRVQGLENVRLI--AVGAFHNLALEEDGRLL 218
Query: 286 SFGCGESASLG 296
++G E LG
Sbjct: 219 AWGNNEYGQLG 229
Score = 73 (30.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 60 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161
Query: 113 TAVLSREGRVYTFSWG 128
+ VL+REG V+T WG
Sbjct: 162 SVVLTREGHVWT--WG 175
Score = 68 (29.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 21/94 (22%), Positives = 37/94 (39%)
Query: 65 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
A + A+G G+ G K +VE+L+ V G+ + + +G ++T
Sbjct: 4 ATSIIAWGSGEDGQLGIGTNEEKEWAC--VVEALEPYSVRSVVSGSRNSLAICDDGTMFT 61
Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
+ W LGH E + L N+ + Q
Sbjct: 62 WGWNQRGTLGHQPETKTENIPSRVKALANVKITQ 95
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 247 (92.0 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 88/345 (25%), Positives = 144/345 (41%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
N R L G + TP C +L ++ G+++A G S G
Sbjct: 4057 NHRGQLGGLEGSRIK-TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRL- 4114
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
GV G+ P L+ SL+++FV + A+ G L+ EG VY + G D +LGH
Sbjct: 4115 -GVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR 4173
Query: 139 PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEK 198
+ P L+ L + V I SG V + D+
Sbjct: 4174 MSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQL 4229
Query: 199 HPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
P+L+E D V +WG G YG LG G + +P ++
Sbjct: 4230 RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIE 4289
Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
+L + + V G + +++ G VY++G G+ LGH ++ D H V P+ V
Sbjct: 4290 SLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV-D-----H--VRRPKKVA 4341
Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+L+ ++++ I+ T S+ H A ++SG++Y +G D+GQLG
Sbjct: 4342 ALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 4379
Score = 239 (89.2 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 77/346 (22%), Positives = 144/346 (41%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
+N++ L G +V P + +++ ++S G+VYA G+ + G
Sbjct: 2993 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRL 3051
Query: 80 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
GV T V P + L+ V + A+ G L+ +G+V+++ G D +LGH
Sbjct: 3052 GLGV--THNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3109
Query: 138 EPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDE 197
+P L+ L + + Q +Y+ T +
Sbjct: 3110 RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNTTQ 3165
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
P+L+ + +DG V +WG G +G LG G E P +
Sbjct: 3166 LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
+ L+ + + + G + ++ G+V+++G G+ LGH G++H V PQ +
Sbjct: 3226 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQPI 3277
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ RV+ +++ ++ H A+T++G++YA+G D GQ G
Sbjct: 3278 GGLR--GRRVIHVAV-GAL----HCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 149 (57.5 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSF 287
G + TWG G Y LGHGN + S+P +V AL+D + VA +GD + ++ +G V+++
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LG+ GN + + L P LV SL +V +RV S + + AL+
Sbjct: 747 GDGDYGKLGN-------GNCNGS-LQPILVESLPRV-QRV----FAGSQF----SVALSS 789
Query: 348 SGKLYAFG 355
G+LY +G
Sbjct: 790 EGQLYTWG 797
Score = 147 (56.8 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 50/149 (33%), Positives = 71/149 (47%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ CGE
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYA--CGE 3045
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
G N G G H NV P + L+Q VV+ +S H ALT GK+
Sbjct: 3046 ----GTNGRL-GLGVTH-NVPLPHQLPVLRQY---VVKKVAVHS--GGKHALALTLDGKV 3094
Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVD 380
+++G G+ G+LG N+T P V+
Sbjct: 3095 FSWGEGEDGKLGH---GNRTTLDKPRLVE 3120
Score = 146 (56.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/135 (32%), Positives = 76/135 (56%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G V WG G YG LG+GN P +V++L V+ V G + +S +G +Y++G
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQLYTWG 797
Query: 289 CGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
++ LGH + QG +V P+LV+SL+ ++R+V +++ S+ AH AL+
Sbjct: 798 --KATCLGHQLVERSVQG---CSV--PRLVSSLQ--HKRIVDVAV--SV---AHCLALSS 843
Query: 348 SGKLYAFGAGDKGQL 362
SG+++ +G D Q+
Sbjct: 844 SGEVFGWGRNDSQQI 858
Score = 142 (55.0 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 43/130 (33%), Positives = 65/130 (50%)
Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
+WG G LGHG+ +VP + AL V G + ++ G++ ++G G A
Sbjct: 639 SWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYA 698
Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
LGH GN L P LV +L + VV ++L + +AH+ ALT G ++A
Sbjct: 699 RLGH-------GNSDDRSL-PTLVVALS--DHMVVDVALGSG---DAHSLALTSEGLVFA 745
Query: 354 FGAGDKGQLG 363
+G GD G+LG
Sbjct: 746 WGDGDYGKLG 755
Score = 135 (52.6 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V TWG G + LGHG+ + PK V AL K I +ATG S+ G+VY++
Sbjct: 4311 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTW 4370
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + Q P+LV +L+ + +V+++ + AHT AL+
Sbjct: 4371 GDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCGS-----AHTLALST 4415
Query: 348 S 348
S
Sbjct: 4416 S 4416
Score = 127 (49.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 235 WGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
WG G LG G E P +AL+ ++ + +A G+ + F V+ DG +++ G G
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGG 4112
Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
LG G + A P L+ SL+ V + V + NS H ALT G++YA
Sbjct: 4113 RLGV-----GGSDSWA---IPTLLGSLQHVFVKKVAV---NS--GGKHCLALTTEGEVYA 4159
Query: 354 FGAGDKGQLG 363
+G G+ G+LG
Sbjct: 4160 WGEGEDGKLG 4169
Score = 100 (40.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 33/104 (31%), Positives = 53/104 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS
Sbjct: 734 SLALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSS 789
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVE--PHP-LLGTLENIPVVQI 159
EG++YT WG LGH V+ P L+ +L++ +V +
Sbjct: 790 EGQLYT--WGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV 831
Score = 44 (20.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 67 QVYAFGKDSFGEAEYGVQGTKLVT-SPQL--VESLKNIFVV-QAAIGNFFTAVLSREGRV 122
++YA G S + + G ++ S + V +L F + Q A +LS+EG++
Sbjct: 534 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 593
Query: 123 YTF 125
YT+
Sbjct: 594 YTW 596
Score = 37 (18.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 343 FALTESGK--LYAFGAGDKGQLG 363
+AL+ G +Y +G +GQLG
Sbjct: 4041 WALSWGGASTIYGWGHNHRGQLG 4063
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 233 (87.1 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 83/298 (27%), Positives = 122/298 (40%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG-RVYTFS 126
V ++G+ G+ +G + SP + +L +V G T S+ G VY++
Sbjct: 36 VCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 93
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
WG+ RLGH + P P+ L I + QI + V S
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVTMEGE---VQSWGRNQN 149
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
D P+ I+ F+ + ++ +DG + WGWGRYG LG G
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT--EDGDLYGWGWGRYGNLGLG 207
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
+ VP+ V + K VA G T VS G +Y++G + LGH + D
Sbjct: 208 DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED---- 263
Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
H L P + +L N + QIS W HT ALT GKLY +G GQ+G+
Sbjct: 264 -H---LIPHKLEALS--NSFISQISGG----WR-HTMALTSDGKLYGWGWNKFGQVGV 310
Score = 160 (61.4 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 45/151 (29%), Positives = 77/151 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+GW +YG LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGW 302
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
+ +G GN + + +P V +++VVQ+S W HT A+TE
Sbjct: 303 NKFGQVG-------VGN-NLDQCSPVQVRFPD--DQKVVQVSCG----WR-HTLAVTERN 347
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
++A+G G GQLGI +R P+ ++
Sbjct: 348 NVFAWGRGTNGQLGI---GESVDRNFPKIIE 375
Score = 116 (45.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG++ WGW ++G +G GN + P V+ +D K + V+ G T V+E +V+++G
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 289 CGESASLG 296
G + LG
Sbjct: 354 RGTNGQLG 361
Score = 100 (40.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 23 RNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYG 82
+NG+ L E + P ++ T +++ G +Y +G +G G
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
Query: 83 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
+ +LV P+ V S + A G T +S G +YT+ W +LGH + +
Sbjct: 208 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265
Query: 143 EPHPLLGTLENIPVVQI 159
PH L L N + QI
Sbjct: 266 IPHKL-EALSNSFISQI 281
Score = 98 (39.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ +S +G +Y +G +G+ +G L+ P +E+L N F+ Q + G T L+
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI--PHKLEALSNSFISQISGGWRHTMALTS 293
Query: 119 EGRVYTFSWGNDARLG 134
+G++Y + W ++G
Sbjct: 294 DGKLYGWGWNKFGQVG 309
Score = 96 (38.9 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TPL ++L + ++ G+V ++G++ G+ G LV PQ ++
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 167
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
+ + I + A G TA ++ +G +Y + WG LG + + P + T
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST 221
Score = 81 (33.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 9 AHLSPILRPDII-NERNGKRNLLGR---EVNGTPLYCRSLXXXXXXXXXXXXXXTMLISD 64
+H +L DI+ + G+ LG E +P +L T+ S
Sbjct: 25 SHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQ 84
Query: 65 AG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
+G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG V
Sbjct: 85 SGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQ 142
Query: 124 TFSWGND 130
SWG +
Sbjct: 143 --SWGRN 147
Score = 59 (25.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALN 261
V WG G G LG G + PK+++AL+
Sbjct: 349 VFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 73/285 (25%), Positives = 114/285 (40%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 190
+LGH +E + EP +G L +V + Q G V+S
Sbjct: 64 GQLGHESEGSKPEP---IGALAGQHIVHVACGESHSVALSDQ--GQ-VFSWGAGSDGQLG 117
Query: 191 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 248
+ D PRLI++ LN Q DG+ TWG YG LG G +
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG-K 173
Query: 249 ECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
EC S P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 174 ECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP 233
Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
H +L Q V + E ++ + ++ TF G+L
Sbjct: 234 CHVKLLRSQKVVYISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 185 (70.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 69/272 (25%), Positives = 113/272 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G+ P +L ++ +SD GQV+++G S G+ G+ +
Sbjct: 66 LGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL--GLTTIED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
VT P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 AVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +L+ IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VK-SLDGIPLAQVAAGGAHSFALSL--SG-AVFGWGKNSSGQLGLSDERDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATGDYTTFV-VSEDGDVYSFGCGESASLG 296
+A G + T V G +Y+FGCG LG
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 178 (67.7 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 54/153 (35%), Positives = 76/153 (49%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG+ TWG YG LG G +EC S P+ V++L+ + VA G +F +S G V+
Sbjct: 155 DGQFFTWGQNSYGQLGLG-KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G S LG + D + H +L Q +VV IS HT LT
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQ----------KVVYISCGEE-----HTAVLT 258
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 174 (66.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 51/152 (33%), Positives = 73/152 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH +E S P+ + AL +HVA G+ + +S+ G V+S+
Sbjct: 51 EDGEVYTCGLNTKGQLGHESEG--SKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG I D V P+L+ L Q + ++QIS N W H AL
Sbjct: 109 GAGSDGQLGLTTIEDA-------VTVPRLIKKLNQ--QTILQISCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G+ + +G GQLG L + +P+RV
Sbjct: 155 DGQFFTWGQNSYGQLG--LGKECPSQASPQRV 184
Score = 156 (60.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 44/135 (32%), Positives = 65/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +E P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT A S
Sbjct: 269 GSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVSQIACGRH-----HTLAFVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G +GQLG
Sbjct: 314 GMIYAFGCGTRGQLG 328
Score = 99 (39.9 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G+VY G ++ G+ + +G+K P+ + +L +V A G + LS +G
Sbjct: 49 LLED-GEVYTCGLNTKGQLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+V+++ G+D +LG T + V L+ L ++QI
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 192 (72.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 69/272 (25%), Positives = 114/272 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G+ P + +L ++ +SD GQV+++G S G+ G+ +
Sbjct: 66 LGHESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL--GLTTIED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
VT P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 AVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +L+ IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VK-SLDGIPLAQVAAGGAHSFALSL--SG-AVFGWGKNSSGQLGLSDERDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATGDYTTFV-VSEDGDVYSFGCGESASLG 296
+A G + T V G +Y+FGCG LG
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 182 (69.1 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 73/285 (25%), Positives = 115/285 (40%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 190
+LGH +E + +P +GTL +V + Q G V+S
Sbjct: 64 GQLGHESEGS--KP-AWVGTLAGQHIVHVACGESHSVALSDQ--GQ-VFSWGAGSDGQLG 117
Query: 191 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 248
+ D PRLI++ LN Q DG+ TWG YG LG G +
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG-K 173
Query: 249 ECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
EC S P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 174 ECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP 233
Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
H +L Q V + E ++ + ++ TF G+L
Sbjct: 234 CHVKLLRSQKVVYISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 178 (67.7 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 54/153 (35%), Positives = 76/153 (49%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG+ TWG YG LG G +EC S P+ V++L+ + VA G +F +S G V+
Sbjct: 155 DGQFFTWGQNSYGQLGLG-KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G S LG + D + H +L Q +VV IS HT LT
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQ----------KVVYISCGEE-----HTAVLT 258
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 168 (64.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 51/152 (33%), Positives = 71/152 (46%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH +E S P V L +HVA G+ + +S+ G V+S+
Sbjct: 51 EDGEVYTCGLNTKGQLGHESEG--SKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG I D V P+L+ L Q + ++QIS N W H AL
Sbjct: 109 GAGSDGQLGLTTIEDA-------VTVPRLIKKLNQ--QTILQISCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G+ + +G GQLG L + +P+RV
Sbjct: 155 DGQFFTWGQNSYGQLG--LGKECPSQASPQRV 184
Score = 156 (60.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 44/135 (32%), Positives = 65/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +E P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT A S
Sbjct: 269 GSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVSQIACGRH-----HTLAFVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G +GQLG
Sbjct: 314 GMIYAFGCGTRGQLG 328
Score = 98 (39.6 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G+VY G ++ G+ + +G+K P V +L +V A G + LS +G
Sbjct: 49 LLED-GEVYTCGLNTKGQLGHESEGSK----PAWVGTLAGQHIVHVACGESHSVALSDQG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+V+++ G+D +LG T + V L+ L ++QI
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 193 (73.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 69/272 (25%), Positives = 113/272 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G P +L ++ +SD GQ++++G S G+ G+ T+
Sbjct: 66 LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +LE IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296
Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G +T +V G +Y+FGCG LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 172 (65.6 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 51/152 (33%), Positives = 74/152 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG+ TWG +G LG G E ++ P+ V++L + VA G +F +S G V+ +
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + D + H +L Q +VV IS HT LT+
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTK 259
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 169 (64.5 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 46/135 (34%), Positives = 67/135 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT AL S
Sbjct: 269 GSCGQLGHDSVNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLALVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G KGQLG
Sbjct: 314 GLIYAFGCGAKGQLG 328
Score = 166 (63.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 50/153 (32%), Positives = 76/153 (49%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH E + P+ + AL D IHVA G+ + +S+ G ++S+
Sbjct: 51 EDGEVYTCGVNTKGQLGHEREG--NKPEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG D +V P+L+ L Q + ++Q+S N W H AL
Sbjct: 109 GAGSDGQLGLMTTED-------SVAVPRLIQKLNQ--QTILQVSCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGI-ELVNNQTERGNPERV 379
G+ + +G GQLG+ + +QT +P+RV
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQT---SPQRV 184
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 63/272 (23%), Positives = 107/272 (39%)
Query: 83 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
+QG +V PQ+ + + + + A G + L +G VYT +LGH E N
Sbjct: 18 LQG--IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP 75
Query: 143 EPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKH-PR 201
E +G L + ++ + + G ++S + D PR
Sbjct: 76 EQ---IGALADQHIIHVACGESHSLALSDR--GQ-LFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 202 LIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQA 259
LI++ LN Q DG+ TWG +G LG G E ++ P+ V++
Sbjct: 130 LIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS 186
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
L + VA G +F +S G V+ +G + LG + D + H +L Q V
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
+ E ++ + ++ TF G+L
Sbjct: 247 ISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 101 (40.6 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 29/132 (21%), Positives = 60/132 (45%)
Query: 28 NLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
NL G + P CR + ++ + + G+VY G ++ G+ + +G K
Sbjct: 17 NLQG--IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK 74
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
P+ + +L + ++ A G + LS G+++++ G+D +LG T + V L
Sbjct: 75 ----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130
Query: 148 LGTLENIPVVQI 159
+ L ++Q+
Sbjct: 131 IQKLNQQTILQV 142
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 223 (83.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 85/311 (27%), Positives = 132/311 (42%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ ++ G+VYA G + + + + + TK P L+ L++ ++Q G+ + LS
Sbjct: 52 TLFLTATGKVYACGSNDYSQLGHDLP-TK---RPLLIPELQDYVIIQICCGSRHSLALSD 107
Query: 119 EGRVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGM 176
G+V SWG ND +LGH T+ V+ ++ L VVQI G
Sbjct: 108 WGQV--LSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS--CG- 162
Query: 177 AVYSVXXXXXXXXXXXSRTDEKHPRL-IEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
+YS S D H + LL + + G V +
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--F 220
Query: 236 GWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
GWGR C LG +E S P ++ L + VA GD + ++ +G V++ G G
Sbjct: 221 GWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 352
LGH +N + P++V L + + Q++ N HT AL S G++Y
Sbjct: 281 QLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVY 325
Query: 353 AFGAGDKGQLG 363
AFG G GQLG
Sbjct: 326 AFGLGSSGQLG 336
Score = 145 (56.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 44/151 (29%), Positives = 75/151 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G+V +WG G LGH + E +PKVV+ L + +A G+ + ++ G++YS+G
Sbjct: 109 GQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG N+ D H N P +T+L + I L H+F +++S
Sbjct: 169 SNIYGQLGVNSPND---LTHCNY--PLRLTTL-------LGIPLAAIACGGNHSFLISKS 216
Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G ++ +G + GQLG+ N++T R P ++
Sbjct: 217 GAVFGWGRNNCGQLGL---NDETNRSYPTQL 244
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/150 (31%), Positives = 71/150 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V G Y LGH + P ++ L D I + G + +S+ G V S+G
Sbjct: 59 GKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
+ LGH D + V P++V L V + VVQI+ N+ H+ ALT G
Sbjct: 117 NDCGQLGH--ATDKE-----IVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCG 162
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERV 379
+LY++G+ GQLG+ N+ T P R+
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRL 192
Score = 93 (37.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 230 GRVCTWGWGRYGCLGHG--NE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
G + +WG YG LG N+ C + P + L + +A G +F++S+ G V+
Sbjct: 162 GELYSWGSNIYGQLGVNSPNDLTHC-NYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVF 220
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G LG N + NR P + +L+ + R V S++ L
Sbjct: 221 GWGRNNCGQLGLN----DETNRSY----PTQLKTLRTLGVRFVACGDEFSVF-------L 265
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQ 370
T G ++ GAG GQLG +N+
Sbjct: 266 TNEGGVFTCGAGAYGQLGHGFSSNE 290
Score = 78 (32.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 67 QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
++Y +G S G+ G ++ +++T P + + V Q A G+ T L+ G+VY
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 126 SWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQI 159
+ ++LGH P PLL L++ ++QI
Sbjct: 65 GSNDYSQLGHDL-PTK---RPLLIPELQDYVIIQI 95
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 219 (82.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 78/299 (26%), Positives = 135/299 (45%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 179
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGHN 298
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH- 596
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
G NR V P+++ +L+ + R V +S+ ALT +G++YA+G G
Sbjct: 597 ----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAWGCG 641
Score = 201 (75.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 65/284 (22%), Positives = 123/284 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 117
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G +A ++
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G +YT+ G+ RLGH + N L+ + N+ V G
Sbjct: 528 EDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK----DGRT 582
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
V+S P++IE Q + ++ G+V WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TGQVYAWGC 640
Query: 238 GRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G + S+G
Sbjct: 641 G--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG---NNSMG 695
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 696 QC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 192 (72.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 50/137 (36%), Positives = 75/137 (54%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V +WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LGH G N N+ P LV + V E +S +S HT AL++
Sbjct: 536 GEGDFGRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSK 578
Query: 348 SGK-LYAFGAGDKGQLG 363
G+ +++FG GD G+LG
Sbjct: 579 DGRTVWSFGGGDNGKLG 595
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 70/279 (25%), Positives = 111/279 (39%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLS 117
T +IS G V A GK S+G G + E ++I V ++ G+ T +
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT 474
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 475 TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE--- 531
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWG 236
+Y+ P L++ N+ +DGR V ++G
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFG 587
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
G+ A L P+L+ L R+V IS+ +S
Sbjct: 646 C-------GSSEATALRPKLIEELAAT--RIVDISIGDS 675
Score = 160 (61.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DGR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY+
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+GCG A LG G+ A L P+L+ L R+V IS+ +S H +L+
Sbjct: 638 WGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLS 681
Query: 347 ESGKLYAFGAGDKGQLG 363
++YA+G GQ G
Sbjct: 682 HDNEVYAWGNNSMGQCG 698
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG L G +E PK+ + +D + I G Y TFV+S DG V + CG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSVRA--CGK 429
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
S G + D LT + S+K+V+ S S + HT A T G++
Sbjct: 430 G-SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------SSKGS---DGHTLAFTTEGEV 479
Query: 352 YAFGAGDKGQLG 363
+++G GD G+LG
Sbjct: 480 FSWGDGDYGKLG 491
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 191 (72.3 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 69/272 (25%), Positives = 112/272 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G P +L ++ +SD GQ++++G S G+ G+ T+
Sbjct: 66 LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +LE IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G +T V G +Y+FGCG LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328
Score = 169 (64.5 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 50/152 (32%), Positives = 74/152 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG+ TWG +G LG G E ++ P+ V++L + VA G +F +S G V+ +
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + D + H +L Q +VV IS HT LT+
Sbjct: 215 GMNNAGQLGLSDEEDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTK 259
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH E + P+ + AL D +HVA G+ + +S+ G ++S+
Sbjct: 51 EDGEVYTCGLNTKGQLGHEREG--NKPEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG D +V P+L+ L Q + ++Q+S N W H AL
Sbjct: 109 GAGSDGQLGLMTTED-------SVAVPRLIQKLNQ--QTILQVSCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G+ + +G GQLG L + +P+RV
Sbjct: 155 DGQFFTWGKNSHGQLG--LGKEYPSQASPQRV 184
Score = 167 (63.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 46/135 (34%), Positives = 66/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT A S
Sbjct: 269 GSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G KGQLG
Sbjct: 314 GLIYAFGCGAKGQLG 328
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 66/284 (23%), Positives = 109/284 (38%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 190
+LGH E N E +G L + +V + + G ++S
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDR--GQ-LFSWGAGSDGQLG 117
Query: 191 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 248
+ D PRLI++ LN Q DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 YPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
H +L Q V + E ++ + ++ TF G+L
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 96 (38.9 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G+VY G ++ G+ + +G K P+ + +L + +V A G + LS G
Sbjct: 49 LLED-GEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESHSLALSDRG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+++++ G+D +LG T + V L+ L ++Q+
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 190 (71.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 69/272 (25%), Positives = 112/272 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G P +L ++ +SD GQ++++G S G+ G+ T+
Sbjct: 66 LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +LE IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G +T V G +Y+FGCG LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 169 (64.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 50/152 (32%), Positives = 74/152 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG+ TWG +G LG G E ++ P+ V++L + VA G +F +S G V+ +
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + D + H +L Q +VV IS HT LT+
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTK 259
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 168 (64.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 49/152 (32%), Positives = 73/152 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH E + P+ + AL D IHVA G+ + +S+ G ++S+
Sbjct: 51 EDGEVYTCGLNTKGQLGHEREG--NKPEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG D +V P+L+ L Q + ++Q+S N W H AL
Sbjct: 109 GAGSDGQLGLMTTED-------SVAVPRLIQKLNQ--QTILQVSCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G+ + +G GQLG L + +P+RV
Sbjct: 155 DGQFFTWGKNSHGQLG--LGKEFPSQASPQRV 184
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 65/284 (22%), Positives = 109/284 (38%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 190
+LGH E N E +G L + ++ + + G ++S
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDR--GQ-LFSWGAGSDGQLG 117
Query: 191 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 248
+ D PRLI++ LN Q DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
H +L Q V + E ++ + ++ TF G+L
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 160 (61.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT A S
Sbjct: 269 GSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G +GQLG
Sbjct: 314 GLIYAFGCGARGQLG 328
Score = 95 (38.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G+VY G ++ G+ + +G K P+ + +L + ++ A G + LS G
Sbjct: 49 LLED-GEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESHSLALSDRG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+++++ G+D +LG T + V L+ L ++Q+
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 190 (71.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 69/272 (25%), Positives = 112/272 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G P +L ++ +SD GQ++++G S G+ G+ T+
Sbjct: 66 LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEE 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +LE IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G +T V G +Y+FGCG LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 169 (64.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 50/152 (32%), Positives = 74/152 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG+ TWG +G LG G E ++ P+ V++L + VA G +F +S G V+ +
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + D + H +L Q +VV IS HT LT+
Sbjct: 215 GMNNAGQLGLSDEEDRESPCHVKLLRAQ----------KVVYISCGEE-----HTAVLTK 259
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 163 (62.4 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 45/135 (33%), Positives = 66/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT A S
Sbjct: 269 GSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G +GQLG
Sbjct: 314 GLIYAFGCGARGQLG 328
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH E + P+ + AL D +HVA G+ + +S+ G ++S+
Sbjct: 51 EDGEVYTCGLNTKGQLGHEREG--NKPEQIGALADEHIVHVACGESHSLALSDRGQLFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG + +V P+L+ L Q + ++Q+S N W H AL
Sbjct: 109 GAGSDGQLGLMTTEE-------SVAVPRLIQKLNQ--QTILQVSCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G+ + +G GQLG L + +P+RV
Sbjct: 155 DGQFFTWGKNSHGQLG--LGKEFPSQASPQRV 184
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 67/285 (23%), Positives = 111/285 (38%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 190
+LGH E N E +G L + +V + + G ++S
Sbjct: 64 GQLGHEREGNKPEQ---IGALADEHIVHVACGESHSLALSDR--GQ-LFSWGAGSDGQLG 117
Query: 191 XXSRTDEKH--PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGN 247
+ T+E PRLI++ LN Q DG+ TWG +G LG G
Sbjct: 118 LMT-TEESVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 248 E-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
E ++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP 233
Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
H +L Q V + E ++ + ++ TF G+L
Sbjct: 234 CHVKLLRAQKVVYISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 95 (38.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G+VY G ++ G+ + +G K P+ + +L + +V A G + LS G
Sbjct: 49 LLED-GEVYTCGLNTKGQLGHEREGNK----PEQIGALADEHIVHVACGESHSLALSDRG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+++++ G+D +LG T V L+ L ++Q+
Sbjct: 104 QLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQV 142
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 214 (80.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 78/323 (24%), Positives = 134/323 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V + G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+VY + D +LG + + +L I +VQ+ G V
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEV 158
Query: 179 YSVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
+S +++ P +I+ LL + G + WG
Sbjct: 159 FSWGQNKYGQLGLGYEYKKQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGR 216
Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
++G LG ++ VP ++++L K +H+ G+ T ++++G V++FG G LGH
Sbjct: 217 NKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGA 356
N+ + H + P+ V L + V QI+ HT A SG++Y+FG
Sbjct: 277 NSTS------HE--INPRKVFEL--MGSLVTQITCGRQ-----HTTAFVPSSGRIYSFGL 321
Query: 357 GDKGQLGIELVNNQ----TERGN 375
G GQLG +N+ T +GN
Sbjct: 322 GGNGQLGTGTTSNRKSPFTVKGN 344
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 40/173 (23%), Positives = 74/173 (42%)
Query: 30 LGREVN--GTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
LG E +P +SL + +++ +G ++ +G++ FG+ +
Sbjct: 171 LGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
V P L++SL+ VV G TA L++EG V+TF G +LGH++ +++ P +
Sbjct: 231 YV--PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 148 LGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
+ ++ V QI PS +YS + ++ K P
Sbjct: 289 FELMGSL-VTQITCGRQHTTAFV--PSSGRIYSFGLGGNGQLGTGTTSNRKSP 338
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 60/263 (22%), Positives = 106/263 (40%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++V P+ + N + G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 190
+LGH E H +G L+ +V + + G VY+
Sbjct: 64 GQLGHEKARKRPE-H--VGALDAQNIVAVSCGEAHTLALNDK--GQ-VYAWGLATDGQLG 117
Query: 191 XXSRTDE--KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNE 248
T+E + PR I+ + + G + V +WG +YG LG G E
Sbjct: 118 LPG-TEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE--VFSWGQNKYGQLGLGYE 174
Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
+ ++ P V+++L + +A G +FV++ G ++ +G + LG N +R
Sbjct: 175 YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DDNDR 230
Query: 308 HANVLTPQLVTSLKQVNERVVQI 330
+ P L+ SL+ ++VV I
Sbjct: 231 YV----PTLLKSLR--TQKVVHI 247
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 68/272 (25%), Positives = 111/272 (40%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G P +L ++ +SD GQ++++G S G+ G+ +
Sbjct: 66 LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQL--GLMTIED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQR 183
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQF 206
+ +LE IP+ Q+ SG AV+ D + P ++
Sbjct: 184 VR-SLEGIPLAQVVAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHVK-- 237
Query: 207 QLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
LL Q + G V T+G G G LGH + E P+ V L +
Sbjct: 238 -LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G +T V G +Y+FGCG LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 173 (66.0 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 49/152 (32%), Positives = 74/152 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG V T G G LGH E + P+ + AL D +HVA G+ + +S+ G ++S+
Sbjct: 51 EDGEVYTCGVNTKGQLGHEREG--NKPEQIGALADQHIVHVACGESHSLALSDQGQLFSW 108
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG I D +V P+L+ L Q + ++Q+S N W H AL
Sbjct: 109 GAGSDGQLGLMTIED-------SVAVPRLIQKLNQ--QTILQVSCGN---W--HCLALAA 154
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G+ + +G GQLG L + +P+RV
Sbjct: 155 DGQFFTWGRNSHGQLG--LGKEFPSQASPQRV 184
Score = 165 (63.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 49/152 (32%), Positives = 73/152 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG+ TWG +G LG G E ++ P+ V++L + V G +F +S G V+ +
Sbjct: 155 DGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGW 214
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + D + H +L Q +VV IS HT LT+
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTK 259
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 160 (61.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGH+++ D + P+ V L + V QI+ HT A S
Sbjct: 269 GSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVPSS 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG G +GQLG
Sbjct: 314 GLIYAFGCGARGQLG 328
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 65/272 (23%), Positives = 106/272 (38%)
Query: 83 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
+QG +V PQ+ + + V + A G + L +G VYT +LGH E N
Sbjct: 18 LQG--IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP 75
Query: 143 EPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKH-PR 201
E +G L + +V + Q G ++S + D PR
Sbjct: 76 EQ---IGALADQHIVHVACGESHSLALSDQ--GQ-LFSWGAGSDGQLGLMTIEDSVAVPR 129
Query: 202 LIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQA 259
LI++ LN Q DG+ TWG +G LG G E ++ P+ V++
Sbjct: 130 LIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS 186
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
L + V G +F +S G V+ +G + LG + D + H +L Q V
Sbjct: 187 LEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
+ E ++ + ++ TF G+L
Sbjct: 247 ISCGEEHTAVLTKSGGVF----TFGAGSCGQL 274
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 43/140 (30%), Positives = 66/140 (47%)
Query: 23 RNGKRNL-LGREV--NGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 79
RN L LG+E +P RSL + +S +G V+ +G ++ G+
Sbjct: 163 RNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQL 222
Query: 80 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
G+ K SP V+ L+ VV + G TAVL++ G V+TF G+ +LGH +
Sbjct: 223 --GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280
Query: 140 NDVEPHPLLGTLENIPVVQI 159
++V P +L L V QI
Sbjct: 281 DEVNPRRVL-ELMGSEVTQI 299
Score = 96 (38.9 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G+VY G ++ G+ + +G K P+ + +L + +V A G + LS +G
Sbjct: 49 LLED-GEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESHSLALSDQG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+++++ G+D +LG T + V L+ L ++Q+
Sbjct: 104 QLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQV 142
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 211 (79.3 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 77/322 (23%), Positives = 136/322 (42%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V + G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+VY + +D +LG + + +L +I +VQ+ + S +
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS-KASEVFC 160
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
+ + + P+LI+ LL + G + WG
Sbjct: 161 WGQNKYGQLGLGIECQK-QTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
++G LG +E VP ++++L K +++ G+ T ++++G V++FG G LGHN
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAG 357
+ + H + P+ V L + V QI+ HT A SG++Y+FG G
Sbjct: 278 STS------HE--INPRKVFEL--MGSIVTQIACGRQ-----HTSAFVPSSGRIYSFGLG 322
Query: 358 DKGQLGIELVNNQ----TERGN 375
GQLG +N+ T +GN
Sbjct: 323 GNGQLGTGSTSNRKSPFTVKGN 344
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 38/164 (23%), Positives = 73/164 (44%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
+P +SL + +++ +G ++ +G++ FG+ + + V P L++
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 237
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I V
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 296
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
QI PS +YS S ++ K P
Sbjct: 297 TQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 152 (58.6 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG+ E E P++++AL ++ VA G + + VSE GD+Y +G
Sbjct: 180 GQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGW 239
Query: 290 GESASL 295
ES L
Sbjct: 240 NESGQL 245
Score = 104 (41.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/74 (27%), Positives = 42/74 (56%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ +AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + +S
Sbjct: 174 LLLCEAGQVFSWGGGRHGQLGHGSLEAEL--EPRLLEALQGLRMAEVAAGGWHSVCVSET 231
Query: 120 GRVYTFSWGNDARL 133
G +Y + W +L
Sbjct: 232 GDIYIWGWNESGQL 245
Score = 83 (34.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVP-KV---VQALNDVKAIHVATGDYTTFV 277
G + TWGWG+YG LGH + P +V V+ +V+A V G + T+V
Sbjct: 321 GELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRA--VTCGPWNTYV 370
Score = 67 (28.6 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
HT +T +G+LY +G G GQLG + + T P RV+
Sbjct: 313 HTAVVTRTGELYTWGWGKYGQLGHK---DSTSSDQPCRVE 349
Score = 64 (27.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 304 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 336
Score = 63 (27.2 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
G + FG FG+A G V SP+ + + ++ V A+ +TA+++R GRV
Sbjct: 7 GAWFGFGFCGFGQALGSGNGQHAVHSPEPLHAADDVCQVSASWS--YTALVTRGGRV 61
Score = 63 (27.2 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 29/122 (23%), Positives = 44/122 (36%)
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLG---HGNEECESV 253
E PRL+E Q L+ + G + WGW G L E ++V
Sbjct: 201 ELEPRLLEALQ--GLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTV 258
Query: 254 PKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
+ LND ++ A D + + F LG +A+ G+RH V
Sbjct: 259 REEATELNDDGLRGEEAALADVGA--PAHFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 312 LT 313
+T
Sbjct: 317 VT 318
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 219 (82.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 78/299 (26%), Positives = 135/299 (45%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 179
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGHN 298
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH- 596
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
G NR V P+++ +L+ + R V +S+ ALT +G++YA+G G
Sbjct: 597 ----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAWGCG 641
Score = 203 (76.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 65/284 (22%), Positives = 123/284 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 117
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G +A ++
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G +YT+ G+ RLGH + N L+ + N+ V G
Sbjct: 528 EDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK----DGRT 582
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
V+S P++IE Q + ++ G+V WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TGQVYAWGC 640
Query: 238 GRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G + S+G
Sbjct: 641 G--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG---NNSMG 695
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 696 QC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 192 (72.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 50/137 (36%), Positives = 75/137 (54%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V +WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LGH G N N+ P LV + V E +S +S HT AL++
Sbjct: 536 GEGDFGRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSK 578
Query: 348 SGK-LYAFGAGDKGQLG 363
G+ +++FG GD G+LG
Sbjct: 579 DGRTVWSFGGGDNGKLG 595
Score = 182 (69.1 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 66/282 (23%), Positives = 118/282 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV++
Sbjct: 4092 SMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+++TF G+ RLG N P + LE + Q+ G V
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--GSMV 4206
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + T + P+ ++ + ++ +DG V T+G
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTFGQD 4264
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
R L G + P+ + L V VA G T ++ GDVY++G LG
Sbjct: 4265 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL- 4323
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G N +V P LVT L+ N R + +S W A
Sbjct: 4324 ----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4358
Score = 181 (68.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 70/279 (25%), Positives = 111/279 (39%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLS 117
T +IS G V A GK S+G G + E ++I V ++ G+ T +
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT 474
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 475 TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE--- 531
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWG 236
+Y+ P L++ N+ +DGR V ++G
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFG 587
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
G+ A L P+L+ L R+V IS+ +S
Sbjct: 646 C-------GSSEATALRPKLIEELAAT--RIVDISIGDS 675
Score = 176 (67.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAIGNF-FTAV 115
T +I G V A G+ S+G G V + ++ +L+ V Q + G+ +
Sbjct: 4037 TFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMA 4094
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
L+ G V+++ G+ +LGH P + L+ VVQ+ S
Sbjct: 4095 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVT---SD 4150
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCT 234
+++ + +++K P + + Q DG V
Sbjct: 4151 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVSADGSMVWA 4208
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
+G G YG LG GN +S P+ V L + VA G + +++DG VY+FG +
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRL 4266
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
+G + +G+ H PQ + L V V++ + HT AL +G +YA+
Sbjct: 4267 IG---LPEGRARNHNR---PQQIPVLAGV---VIEDVAVGA----EHTLALASTGDVYAW 4313
Query: 355 GAGDKGQLGIELVNNQTE 372
G+ +GQLG+ N+ E
Sbjct: 4314 GSNSEGQLGLGHTNHVRE 4331
Score = 163 (62.4 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DGR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY+
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+GCG A LG G+ A L P+L+ L R+V IS+ +S H AL+
Sbjct: 638 WGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALS 681
Query: 347 ESGKLYAFGAGDKGQLG 363
++YA+G GQ G
Sbjct: 682 HDNEVYAWGNNSMGQCG 698
Score = 141 (54.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/231 (25%), Positives = 86/231 (37%)
Query: 68 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
VY +G G+ AE G + V P S Q G T V+ G V
Sbjct: 3997 VYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACG 4050
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
G+ RLG +D+ ++ L+ V Q+ V+S
Sbjct: 4051 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
+ ++ PR IE Q + DG++ T+G G YG LG G
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 296
N + +P+ V AL + VA G T VS DG V++FG G+ LG
Sbjct: 4168 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 136 (52.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 49/150 (32%), Positives = 75/150 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG GR+G L VP + + +A V G TFV+ +G V + CGE
Sbjct: 3997 VYLWGAGRHGQLAEAGRNV-MVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLA--CGE 4051
Query: 292 SASLGHNAIADGQGNRH-ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
S G GQGN +VLT ++++L + V L S + H+ ALTESG+
Sbjct: 4052 G-SYGRL----GQGNSDDLHVLT--VISAL----QGFVVTQLVTSCGSDGHSMALTESGE 4100
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
++++G GD G+LG N+ +R P +++
Sbjct: 4101 VFSWGDGDYGKLGHG--NSDRQR-RPRQIE 4127
Score = 134 (52.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG L G +E PK+ + +D + I G Y TFV+S DG V + CG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSVRA--CGK 429
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
S G + D LT + S+K+V+ S S + HT A T G++
Sbjct: 430 G-SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------SSKGS---DGHTLAFTTEGEV 479
Query: 352 YAFGAGDKGQLG 363
+++G GD G+LG
Sbjct: 480 FSWGDGDYGKLG 491
Score = 91 (37.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQ 361
G GN +N P+ VT+L+ V L HT A++ G + +AFG GD G+
Sbjct: 4165 GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGDGDYGK 4216
Query: 362 LGIELVNNQTERGNPERVDI 381
LG+ N T + +P++VD+
Sbjct: 4217 LGL---GNSTAKSSPQKVDV 4233
Score = 42 (19.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 109 GNFFTAVLSREGRVYTFSW-GNDARL 133
G+F T VL E R +F G + +L
Sbjct: 2132 GDFITCVLDMEARTISFGKNGEEPKL 2157
Score = 38 (18.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 345 LTESGKLYAFGAGDKG 360
+ E+G++ G+G KG
Sbjct: 2042 IVENGQILTHGSGGKG 2057
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 219 (82.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 78/299 (26%), Positives = 135/299 (45%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 179
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGHN 298
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH- 596
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
G NR V P+++ +L+ + R V +S+ ALT +G++YA+G G
Sbjct: 597 ----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAWGCG 641
Score = 207 (77.9 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 66/284 (23%), Positives = 124/284 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 117
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G +A ++
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G +YT+ G+ RLGH + N L+ + N+ V G
Sbjct: 528 EDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK----DGRT 582
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
V+S P++IE Q + ++ G+V WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TGQVYAWGC 640
Query: 238 GRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G + S+G
Sbjct: 641 G--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG---NNSMG 695
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
GQGN + P+ V+ L V+ + + ++S+ W A
Sbjct: 696 QC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 192 (72.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 50/137 (36%), Positives = 75/137 (54%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V +WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LGH G N N+ P LV + V E +S +S HT AL++
Sbjct: 536 GEGDFGRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSK 578
Query: 348 SGK-LYAFGAGDKGQLG 363
G+ +++FG GD G+LG
Sbjct: 579 DGRTVWSFGGGDNGKLG 595
Score = 181 (68.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 70/279 (25%), Positives = 111/279 (39%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLS 117
T +IS G V A GK S+G G + E ++I V ++ G+ T +
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT 474
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 475 TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE--- 531
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWG 236
+Y+ P L++ N+ +DGR V ++G
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFG 587
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
G+ A L P+L+ L R+V IS+ +S
Sbjct: 646 C-------GSSEATALRPKLIEELAAT--RIVDISIGDS 675
Score = 178 (67.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 75/318 (23%), Positives = 127/318 (39%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAIGNF-FTAV 115
T +I G V A G+ S+G G V + ++ +L+ V Q + G+ +
Sbjct: 4039 TFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
L+ G V+++ G+ +LGH P + L+ VVQ+
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTADGK- 4154
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCT 234
+++ + +++K P + + Q DG V
Sbjct: 4155 --LFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTVAVSTDGSMVWA 4210
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
+G G YG LG GN +S P+ V L + VA G + +++DG VY+FG
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRL 4270
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
+G + +G+ H PQ V L V + + HT AL+ +G +YA+
Sbjct: 4271 IG---LPEGRARNHNR---PQQVPVLSGVFIEDIAVGAE-------HTLALSSTGDVYAW 4317
Query: 355 GAGDKGQLGIELVNNQTE 372
G+ +GQLG+ N+ E
Sbjct: 4318 GSNSEGQLGLGHTNHVRE 4335
Score = 173 (66.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 65/284 (22%), Positives = 119/284 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV++
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTA 4151
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+++TF G+ RLG N P + LE + Q+ G V
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTD--GSMV 4208
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + T + P+ ++ + ++ +DG V T+G
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT--KDGHVYTFGQV 4266
Query: 239 RYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+G G + P+ V L+ V +A G T +S GDVY++G LG
Sbjct: 4267 SDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLG 4326
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G N +V P L+T L+ N R + +S W A
Sbjct: 4327 L-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWTA 4362
Score = 163 (62.4 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DGR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY+
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+GCG A LG G+ A L P+L+ L R+V IS+ +S H AL+
Sbjct: 638 WGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALS 681
Query: 347 ESGKLYAFGAGDKGQLG 363
++YA+G GQ G
Sbjct: 682 HDNEVYAWGNNSMGQCG 698
Score = 140 (54.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 59/231 (25%), Positives = 87/231 (37%)
Query: 68 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
VY +G G+ AE G V +P ++ Q G T V+ G V
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPVAAPSFSQAQ------QVVCGQNCTFVIQANGTVLACG 4052
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
G+ RLG +D+ ++ L+ V Q+ V+S
Sbjct: 4053 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
+ ++ PR IE Q + DG++ T+G G YG LG G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4169
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 296
N + +P+ V AL + VA G T VS DG V++FG G+ LG
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4220
Score = 137 (53.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 51/150 (34%), Positives = 76/150 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG GR+G L VP V A + +A V G TFV+ +G V + CGE
Sbjct: 3999 VYLWGAGRHGQLAEAGRNV-MVP--VAAPSFSQAQQVVCGQNCTFVIQANGTVLA--CGE 4053
Query: 292 SASLGHNAIADGQGNRH-ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
S G GQGN +VLT ++++L + V L S + H+ ALTESG+
Sbjct: 4054 G-SYGRL----GQGNSDDLHVLT--VISAL----QGFVVTQLVTSCGSDGHSMALTESGE 4102
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
++++G GD G+LG N+ +R P +++
Sbjct: 4103 VFSWGDGDYGKLGHG--NSDRQR-RPRQIE 4129
Score = 134 (52.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG L G +E PK+ + +D + I G Y TFV+S DG V + CG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSVRA--CGK 429
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
S G + D LT + S+K+V+ S S + HT A T G++
Sbjct: 430 G-SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------SSKGS---DGHTLAFTTEGEV 479
Query: 352 YAFGAGDKGQLG 363
+++G GD G+LG
Sbjct: 480 FSWGDGDYGKLG 491
Score = 91 (37.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQ 361
G GN +N P+ VT+L+ V L HT A++ G + +AFG GD G+
Sbjct: 4167 GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGDGDYGK 4218
Query: 362 LGIELVNNQTERGNPERVDI 381
LG+ N T + +P++VDI
Sbjct: 4219 LGL---GNSTAKSSPQKVDI 4235
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 109 GNFFTAVLSREGRVYTFSW-GNDARL 133
G+F T VL E R +F G + +L
Sbjct: 2134 GDFITCVLDMEARTISFGKNGEEPKL 2159
Score = 38 (18.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 345 LTESGKLYAFGAGDKG 360
+ E+G++ G+G KG
Sbjct: 2044 IVENGQILTHGSGGKG 2059
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 219 (82.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 78/299 (26%), Positives = 135/299 (45%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 179
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGHN 298
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH- 596
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
G NR V P+++ +L+ + R V +S+ ALT +G++YA+G G
Sbjct: 597 ----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAWGCG 641
Score = 204 (76.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 66/284 (23%), Positives = 123/284 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 117
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G +A ++
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G +YT+ G+ RLGH + N L+ + N+ V G
Sbjct: 528 EDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK----DGRT 582
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
V+S P++IE Q + ++ G+V WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TGQVYAWGC 640
Query: 238 GRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G + S+G
Sbjct: 641 G--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG---NNSMG 695
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 696 QC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 192 (72.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 50/137 (36%), Positives = 75/137 (54%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V +WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LGH G N N+ P LV + V E +S +S HT AL++
Sbjct: 536 GEGDFGRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSK 578
Query: 348 SGK-LYAFGAGDKGQLG 363
G+ +++FG GD G+LG
Sbjct: 579 DGRTVWSFGGGDNGKLG 595
Score = 186 (70.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/282 (24%), Positives = 119/282 (42%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV++
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+++TF G+ RLG N P + LE + Q+ G V
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--GSMV 4208
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + T + P+ I+ + ++ +DG V T+G
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT--KDGHVYTFGQD 4266
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
R L G + P+ + L V VA G T ++ +GDVY++G LG
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL- 4325
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G N H V P LVT L+ N R + +S W A
Sbjct: 4326 ----GHTN-H--VREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 180 (68.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 69/279 (24%), Positives = 111/279 (39%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLS 117
T +IS G V A GK S+G G + E ++I V ++ G+ T +
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT 474
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 475 TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE--- 531
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWG 236
+Y+ P L++ N+ +DGR V ++G
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFG 587
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
G+ A L P+L+ L R+V +S+ +S
Sbjct: 646 C-------GSSEATALRPKLIEELAAT--RIVDVSIGDS 675
Score = 174 (66.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 46/138 (33%), Positives = 73/138 (52%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G V +WG G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++F
Sbjct: 4099 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LG GN +N P+ VT+L+ V L HT A++
Sbjct: 4159 GNGDYGRLG-------LGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSA 4203
Query: 348 SGKL-YAFGAGDKGQLGI 364
G + +AFG GD G+LG+
Sbjct: 4204 DGSMVWAFGDGDYGKLGL 4221
Score = 166 (63.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 51/154 (33%), Positives = 75/154 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSEDGDVY 285
+G V G G YG LG GN + V V+ AL + T D + ++E G+V+
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
S+G G+ LGH G +R P+ + +L+ E VVQ+S H+ +
Sbjct: 4105 SWGDGDYGKLGH-----GNSDRQRR---PRQIEALQ--GEEVVQMSCGFK-----HSAVV 4149
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
T GKL+ FG GD G+LG+ N + + PERV
Sbjct: 4150 TSDGKLFTFGNGDYGRLGL---GNTSNKKLPERV 4180
Score = 162 (62.1 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DGR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY+
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+GCG A LG G+ A L P+L+ L R+V +S+ +S H AL+
Sbjct: 638 WGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALS 681
Query: 347 ESGKLYAFGAGDKGQLG 363
++YA+G GQ G
Sbjct: 682 HDNEVYAWGNNSMGQCG 698
Score = 144 (55.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 45/145 (31%), Positives = 69/145 (47%)
Query: 229 DGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+F
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + +G + +G+ H PQ + L V V + HT AL
Sbjct: 4264 G--QDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVGAE-------HTLALAS 4308
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTE 372
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4309 NGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 141 (54.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/231 (25%), Positives = 86/231 (37%)
Query: 68 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
VY +G G+ AE G + V P S Q G T V+ G V
Sbjct: 3999 VYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACG 4052
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
G+ RLG +D+ ++ L+ V Q+ V+S
Sbjct: 4053 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
+ ++ PR IE Q + DG++ T+G G YG LG G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 296
N + +P+ V AL + VA G T VS DG V++FG G+ LG
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 136 (52.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 49/150 (32%), Positives = 75/150 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG GR+G L VP + + +A V G TFV+ +G V + CGE
Sbjct: 3999 VYLWGAGRHGQLAEAGRNV-MVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLA--CGE 4053
Query: 292 SASLGHNAIADGQGNRH-ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
S G GQGN +VLT ++++L + V L S + H+ ALTESG+
Sbjct: 4054 G-SYGRL----GQGNSDDLHVLT--VISAL----QGFVVTQLVTSCGSDGHSMALTESGE 4102
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
++++G GD G+LG N+ +R P +++
Sbjct: 4103 VFSWGDGDYGKLGHG--NSDRQR-RPRQIE 4129
Score = 134 (52.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG L G +E PK+ + +D + I G Y TFV+S DG V + CG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSVRA--CGK 429
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
S G + D LT + S+K+V+ S S + HT A T G++
Sbjct: 430 G-SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------SSKGS---DGHTLAFTTEGEV 479
Query: 352 YAFGAGDKGQLG 363
+++G GD G+LG
Sbjct: 480 FSWGDGDYGKLG 491
Score = 131 (51.2 bits), Expect = 0.00021, P = 0.00021
Identities = 59/289 (20%), Positives = 110/289 (38%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAIGNF-FTAV 115
T +I G V A G+ S+G G V + ++ +L+ V Q + G+ +
Sbjct: 4039 TFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
L+ G V+++ G+ +LGH P + L+ VVQ+ S
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVT---SD 4152
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCT 234
+++ + +++K P + + Q DG V
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVSADGSMVWA 4210
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
+G G YG LG GN +S P+ + L + VA G + +++DG VY+FG
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 4270
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY-WNAHT 342
L + + VL ++ + E + ++ +Y W +++
Sbjct: 4271 LPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNS 4319
Score = 90 (36.7 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQ 361
G GN +N P+ VT+L+ V L HT A++ G + +AFG GD G+
Sbjct: 4167 GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGDGDYGK 4218
Query: 362 LGIELVNNQTERGNPERVDI 381
LG+ N T + +P+++D+
Sbjct: 4219 LGL---GNSTAKSSPQKIDV 4235
Score = 42 (19.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 109 GNFFTAVLSREGRVYTFSW-GNDARL 133
G+F T VL E R +F G + +L
Sbjct: 2134 GDFITCVLDMEARTISFGKNGEEPKL 2159
Score = 40 (19.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 345 LTESGKLYAFGAGDKG 360
L E+G++ G+G KG
Sbjct: 2044 LVENGQILTHGSGGKG 2059
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 175 (66.7 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 57/174 (32%), Positives = 83/174 (47%)
Query: 198 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
+ P+LI+ N++ D + TWG G +G LGHGNE VPK V
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGD--LYTWGKGDFGVLGHGNEVSHWVPKRV 406
Query: 258 QALNDVKAIHV---ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
L ++ IHV A G Y T VV+ G +++FG G LGH G++ + V P
Sbjct: 407 NFL--LEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH-------GDKKS-VFIP 456
Query: 315 QLVTSLKQVNE-R----VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ V SLK + R V + + + + + SGKL+ +G GDKG+LG
Sbjct: 457 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG 510
Score = 148 (57.2 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 45/134 (33%), Positives = 65/134 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G++ TWG G G LGHGN+E + VP V AL + VA G T ++ G VY+ G
Sbjct: 496 GKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS 555
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N+ ADG+ TP V ++++ V+ + Y H LT
Sbjct: 556 PVYGQLG-NSHADGK--------TPNRVEG--KLHKSFVE-EIACGAY---HVAVLTSRT 600
Query: 350 KLYAFGAGDKGQLG 363
++Y +G G G+LG
Sbjct: 601 EVYTWGKGSNGRLG 614
Score = 147 (56.8 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE--------- 280
G++ T+G G +G LGHG+++ +P+ V +L ++ + A G + T V E
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 281 ---DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
G ++++G G+ LGH GN+ L P V +L + N Q++ +S+
Sbjct: 492 NCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCVAALVEPN--FCQVACGHSL- 540
Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
T ALT SG +Y G+ GQLG N+ + P RV+
Sbjct: 541 ----TVALTTSGHVYTMGSPVYGQLG----NSHADGKTPNRVE 575
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 48/170 (28%), Positives = 79/170 (46%)
Query: 194 RTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESV 253
+ D P+ +E +L++Q + G +WG G LGHG +
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVT--KQGESFSWGEESEGRLGHGVDSNIQQ 350
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH GN ++ +
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWV- 402
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P K+VN + I +++ HT +T +G+L+ FG G G LG
Sbjct: 403 P------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/232 (25%), Positives = 98/232 (42%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T +++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 425 TAVVTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482
Query: 119 ------------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXX 166
G+++T+ G+ RLGH + + P + +E Q+
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541
Query: 167 XXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXX 226
SG VY++ S D K P +E +
Sbjct: 542 VALTT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLT 597
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 277
+ V TWG G G LGHG+ + + P +V++L D + +A G ++T V
Sbjct: 598 SRT-EVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 111 (44.1 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L++ G+ +++G++S G +GV + P+L+++L + A G F + ++
Sbjct: 321 VLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVACGEFHSCAVTLS 378
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G +YT+ G+ LGH E + P + LE I V I
Sbjct: 379 GDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSI 418
Score = 94 (38.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 65 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVY 123
+G +Y +GK FG +G + + V P+ V L + I V A G + TAV++ G+++
Sbjct: 378 SGDLYTWGKGDFGVLGHGNEVSHWV--PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLF 435
Query: 124 TFSWGNDARLGH 135
TF G LGH
Sbjct: 436 TFGDGTFGVLGH 447
Score = 90 (36.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V T G YG LG+ + + ++ +V L+ +A G Y V++ +VY++G
Sbjct: 548 GHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
G + LGH + D R++ P LV SLK
Sbjct: 608 GSNGRLGHGDVDD----RNS----PTLVESLK 631
Score = 72 (30.4 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 64 DA-GQVYAFGKDSFGEAEYGVQGTKLVTS---------PQLVESLKNIFVVQAAIGNFFT 113
DA G V+ +G + GE G ++ +S P+ +ES + V A G
Sbjct: 262 DALGDVFIWG-EGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHA 320
Query: 114 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE--NIPVV 157
+++++G +FSWG ++ RLGH + N +P L+ L NI +V
Sbjct: 321 VLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LIDALNTTNIELV 365
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/158 (31%), Positives = 76/158 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V L DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDID 382
E G+++ +G+ + G +G L+ + P +V +D
Sbjct: 136 EDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLD 171
Score = 146 (56.5 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 46/142 (32%), Positives = 70/142 (49%)
Query: 228 QDGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+DGRV WG R G +G +S VP VQ D + + VA+G+ +++ DGD+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DTQVVKVASGNDHLVMLTTDGDL 193
Query: 285 YSFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
Y+ GCGE LG + +G R +L P+ V LK R ++ ++
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVL-LKSRGTRG-RVRFQDAFCGAYF 251
Query: 342 TFALTESGKLYAFGAGDKGQLG 363
TFA++ G +Y FG + QLG
Sbjct: 252 TFAISREGHVYGFGLSNYHQLG 273
Score = 101 (40.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 79 TVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 134
Query: 117 SREGRVYTFSWGN 129
+ +GRV F WG+
Sbjct: 135 TEDGRV--FLWGS 145
Score = 98 (39.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G Y TF +S +G VY FG LG G G+ PQ +TS K N +
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLG----TPGTGS----CFIPQNLTSFK--NSTKSWV 297
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ + HT + GK Y+ G + G+LG+
Sbjct: 298 GFSGGQH---HTVCMDSEGKAYSLGRAEYGRLGL 328
Score = 91 (37.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV L++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
Score = 91 (37.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+GR G LG G EE +S+P ++ L V + VA G + VS+DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPVVSS--VACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Score = 65 (27.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T +++ G+V+ +G SF + GV G + S V+ + VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVML 187
Query: 117 SREGRVYTFSWGNDARLGHHTE 138
+ +G +YT G +LG E
Sbjct: 188 TTDGDLYTLGCGEQGQLGRVPE 209
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 174 (66.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 80/313 (25%), Positives = 132/313 (42%)
Query: 66 GQVYAFGKDSFG-EAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
G+V FG + G G++ V P+ +ES + V A G A++SR+G V+
Sbjct: 235 GEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVF 294
Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 183
T+ + RLGH DV P L +E++ I +Y+
Sbjct: 295 TWGEASGGRLGHGMG-KDVTG-PQL--IESLAATSIDFVACGEFHTCAVTMTGEIYTWGD 350
Query: 184 XXXXXXXXXSRTDEKH--PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYG 241
TD H P+ I L LQ G++ T+G G +G
Sbjct: 351 GTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFG 409
Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCG 290
LGHG++E P+ V++L+ ++ I VA G + + E G ++++G G
Sbjct: 410 VLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDG 469
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
+ + LGH G++ L P V++L ++ +++ +S+ T LT SGK
Sbjct: 470 DKSRLGH-------GDKEPR-LKPTCVSAL--IDHTFHRVACGHSL-----TVGLTTSGK 514
Query: 351 LYAFGAGDKGQLG 363
+Y G+ GQLG
Sbjct: 515 VYTMGSTVYGQLG 527
Score = 137 (53.3 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 35/101 (34%), Positives = 54/101 (53%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+S G+V+ +G+ S G +G+ G K VT PQL+ESL + A G F T ++ G
Sbjct: 286 LVSRQGEVFTWGEASGGRLGHGM-G-KDVTGPQLIESLAATSIDFVACGEFHTCAVTMTG 343
Query: 121 RVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+YT+ G N LGH T+ + P + G LE + + +
Sbjct: 344 EIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASV 384
Score = 122 (48.0 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 44/134 (32%), Positives = 60/134 (44%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G++ TWG G LGHG++E P V AL D VA G T ++ G VY+ G
Sbjct: 461 GKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS 520
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N ADG+ P LV K + V +I+ Y H LT
Sbjct: 521 TVYGQLG-NPNADGK--------LPCLVED-KLTKDCVEEIAC--GAY---HVAVLTSRN 565
Query: 350 KLYAFGAGDKGQLG 363
+++ +G G G+LG
Sbjct: 566 EVFTWGKGANGRLG 579
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T LI+ GQ++ FG +FG +G + T V P+ VESL + + A G + A +
Sbjct: 391 TALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVE 448
Query: 119 -----------EGRVYTFSWGNDARLGHHTEPNDVEP 144
G+++T+ G+ +RLGH + ++P
Sbjct: 449 VIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKP 485
Score = 86 (35.3 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G+V T G YG LG+ N + + +P +V+ L +A G Y V++ +V+++G
Sbjct: 513 GKVYTMGSTVYGQLGNPNADGK-LPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWG 571
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
G + LGH + D R A P LV +LK+
Sbjct: 572 KGANGRLGHGDVED----RKA----PTLVDALKE 597
Score = 81 (33.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
V TWG G G LGHG+ E P +V AL + ++A G T +
Sbjct: 567 VFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 222 (83.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 79/301 (26%), Positives = 136/301 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVIST 420
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMA 177
+G V G+ RLG N L T E + + ++ +
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
V+S + + +K+P+LI Q L +DG + TWG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLG 296
G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LG
Sbjct: 538 GDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
H G NR V P+++ +L+ + R V +S+ ALT +G++YA+G
Sbjct: 596 H-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAWGC 640
Query: 357 G 357
G
Sbjct: 641 G 641
Score = 203 (76.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 65/284 (22%), Positives = 123/284 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 117
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G +A ++
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G +YT+ G+ RLGH + N L+ + N+ V G
Sbjct: 528 EDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK----DGRT 582
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
V+S P++IE Q + ++ G+V WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TGQVYAWGC 640
Query: 238 GRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G + S+G
Sbjct: 641 G--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG---NNSMG 695
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 696 QC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 192 (72.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 50/137 (36%), Positives = 75/137 (54%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V +WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LGH G N N+ P LV + V E +S +S HT AL++
Sbjct: 536 GEGDFGRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSK 578
Query: 348 SGK-LYAFGAGDKGQLG 363
G+ +++FG GD G+LG
Sbjct: 579 DGRTVWSFGGGDNGKLG 595
Score = 182 (69.1 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 66/282 (23%), Positives = 118/282 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV++
Sbjct: 4089 SMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4146
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+++TF G+ RLG N P + LE + Q+ G V
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--GSMV 4203
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + T + P+ ++ + ++ +DG V T+G
Sbjct: 4204 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTFGQD 4261
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
R L G + P+ + L V VA G T ++ GDVY++G LG
Sbjct: 4262 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL- 4320
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G N +V P LVT L+ N R + +S W A
Sbjct: 4321 ----GHTN---HVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355
Score = 176 (67.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAIGNF-FTAV 115
T +I G V A G+ S+G G V + ++ +L+ V Q + G+ +
Sbjct: 4034 TFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMA 4091
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
L+ G V+++ G+ +LGH P + L+ VVQ+ S
Sbjct: 4092 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVT---SD 4147
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCT 234
+++ + +++K P + + Q DG V
Sbjct: 4148 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVSADGSMVWA 4205
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
+G G YG LG GN +S P+ V L + VA G + +++DG VY+FG +
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRL 4263
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
+G + +G+ H PQ + L V V++ + HT AL +G +YA+
Sbjct: 4264 IG---LPEGRARNHNR---PQQIPVLAGV---VIEDVAVGA----EHTLALASTGDVYAW 4310
Query: 355 GAGDKGQLGIELVNNQTE 372
G+ +GQLG+ N+ E
Sbjct: 4311 GSNSEGQLGLGHTNHVRE 4328
Score = 163 (62.4 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DGR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY+
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+GCG A LG G+ A L P+L+ L R+V IS+ +S H AL+
Sbjct: 638 WGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALS 681
Query: 347 ESGKLYAFGAGDKGQLG 363
++YA+G GQ G
Sbjct: 682 HDNEVYAWGNNSMGQCG 698
Score = 141 (54.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 60/231 (25%), Positives = 86/231 (37%)
Query: 68 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
VY +G G+ AE G + V P S Q G T V+ G V
Sbjct: 3994 VYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACG 4047
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
G+ RLG +D+ ++ L+ V Q+ V+S
Sbjct: 4048 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
+ ++ PR IE Q + DG++ T+G G YG LG G
Sbjct: 4107 GKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4164
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 296
N + +P+ V AL + VA G T VS DG V++FG G+ LG
Sbjct: 4165 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215
Score = 134 (52.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG L G +E PK+ + +D + I G Y TFV+S DG V + CG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSVRA--CGK 429
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
S G + D LT + S+K+V+ S S + HT A T G++
Sbjct: 430 G-SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------SSKGS---DGHTLAFTTEGEV 479
Query: 352 YAFGAGDKGQLG 363
+++G GD G+LG
Sbjct: 480 FSWGDGDYGKLG 491
Score = 39 (18.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
L+S AG + SFGE E +G K+ +S
Sbjct: 1852 LLSQAGVLLMA---SFGEGEEDEEGKKIDSS 1879
Score = 38 (18.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 345 LTESGKLYAFGAGDKG 360
+ E+G++ G+G KG
Sbjct: 2041 IVENGQILTHGSGGKG 2056
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 68/242 (28%), Positives = 107/242 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS
Sbjct: 96 TLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 118 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+ V F WG + +LG + L+ +L IP +Q+ SG
Sbjct: 154 KASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG 209
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
A++ D P L++ + + ++G V T+
Sbjct: 210 -AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTF 266
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 294
G G YG LGH + E P+ V L VA G +T+ V G +YSFG G +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
Query: 295 LG 296
LG
Sbjct: 327 LG 328
Score = 166 (63.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGHN+ + H + P+ V L + V Q++ HT A S
Sbjct: 269 GGYGQLGHNSTS------HE--INPRKVFEL--MGSIVTQVACGRQ-----HTSAFVPSS 313
Query: 349 GKLYAFGAGDKGQLGIELVNNQ----TERGN 375
G++Y+FG G GQLG +N+ T +GN
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 161 (61.7 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 51/176 (28%), Positives = 83/176 (47%)
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWGWGRYGCLG-HGNEECESVP 254
EK + EQ L+ Q D G+V WG G LG G+EEC VP
Sbjct: 69 EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVP 128
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ +++L+D++ + VA G Y + +S+ +V+ +G + LG Q +P
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQ-------TSP 181
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
QL+ SL + +Q++ AH+F LT SG ++ +G GQLG+ N++
Sbjct: 182 QLIKSLLGIP--FMQVAAGG-----AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 37/164 (22%), Positives = 73/164 (44%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
+P +SL + +++ +G ++ +G++ FG+ + + V P L++
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 237
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I V
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 296
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
Q+ PS +YS S ++ K P
Sbjct: 297 TQVACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V T G G LGH E+ P+ V AL+ + VA G+ T +++ G VY++G
Sbjct: 52 DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG QG+ + P+ + SL + ++VQ++ Y+ H+ AL+++
Sbjct: 110 LDSDGQLGL------QGSEEC-IRVPRNIKSLSDI--QIVQVACG---YY--HSLALSKA 155
Query: 349 GKLYAFGAGDKGQLGI 364
+++ +G GQLG+
Sbjct: 156 SEVFCWGQNKYGQLGL 171
Score = 87 (35.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V A G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY + +D +LG + + +L +I +VQ+
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142
Score = 59 (25.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G S+G+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 131 ARLGHHTEPNDVEPHPLLGT-LENIPVV 157
+LGH E + +P ++ +NI V
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAV 89
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 68/242 (28%), Positives = 107/242 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS
Sbjct: 96 TLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 118 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+ V F WG + +LG T+ LL +L IP +Q+ SG
Sbjct: 154 KASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG 209
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
A++ D P L++ + + ++G V T+
Sbjct: 210 -AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTF 266
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 294
G G YG LGH + E P+ V L +A G +T+ V G +YSFG G +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
Query: 295 LG 296
LG
Sbjct: 327 LG 328
Score = 164 (62.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGHN+ + H + P+ V L + V +I+ HT A S
Sbjct: 269 GGYGQLGHNSTS------HE--INPRKVFEL--MGSIVTEIACGRQ-----HTSAFVPSS 313
Query: 349 GKLYAFGAGDKGQLGIELVNNQ----TERGN 375
G++Y+FG G GQLG +N+ T +GN
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 156 (60.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 51/176 (28%), Positives = 83/176 (47%)
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWGWGRYGCLGH-GNEECESVP 254
EK + EQ L+ Q D G+V WG G LG G+EEC VP
Sbjct: 69 EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVP 128
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ +++L+D++ + VA G Y + +S+ +V+ +G + LG Q +P
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ-------TSP 181
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
QL+ SL + +Q++ AH+F LT SG ++ +G GQLG+ N++
Sbjct: 182 QLLKSLLGIP--FMQVAAGG-----AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/164 (22%), Positives = 73/164 (44%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
+P +SL + +++ +G ++ +G++ FG+ + + V P L++
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 237
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I V
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 296
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
+I PS +YS S ++ K P
Sbjct: 297 TEIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V T G G LGH E+ P+ V AL+ + V+ G+ T +++ G VY++G
Sbjct: 52 DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G+ + P+ + SL + ++VQ++ Y+ H+ AL+++
Sbjct: 110 LDSDGQLGL------VGSEEC-IRVPRNIKSLSDI--QIVQVACG---YY--HSLALSKA 155
Query: 349 GKLYAFGAGDKGQLGI 364
+++ +G GQLG+
Sbjct: 156 SEVFCWGQNKYGQLGL 171
Score = 81 (33.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V + G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY + +D +LG + + +L +I +VQ+
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQV 142
Score = 61 (26.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 131 ARLGHHTEPNDVEPHPLLGT-LENIPVV 157
+LGH E + +P ++ +NI V
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAV 89
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 164 (62.8 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 51/154 (33%), Positives = 79/154 (51%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG+V +WG R G LG GN C ++ P+ V++L + VA G +F +S G S
Sbjct: 151 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT--S 208
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G + S G A++ G + + P + +LK +N VV IS Y HT LT
Sbjct: 209 FGWGNNRS-GQLALS-GNSAKAEQIYKPHSIGALKTLN--VVYISCG---Y--EHTSVLT 259
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
E G+++ FG QL + ++ RG P+ ++
Sbjct: 260 EDGQVFTFGGSSSEQLQH---SPRSGRGGPQLIE 290
Score = 163 (62.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 45/136 (33%), Positives = 69/136 (50%)
Query: 230 GRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GRV TWG G G LG G ++E +P + +L +K I V+ G Y + +SEDG V+S+G
Sbjct: 100 GRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 159
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG GN + +PQ V SL+ + + Q++ + H+FAL+
Sbjct: 160 SNRQGQLG-------LGNNLCSQASPQKVKSLEGIP--LAQVAAGGT-----HSFALSLM 205
Query: 349 GKLYAFGAGDKGQLGI 364
G + +G GQL +
Sbjct: 206 GTSFGWGNNRSGQLAL 221
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 51/241 (21%), Positives = 98/241 (40%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 93 SVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 151
Query: 119 EGRVYTFSWGNDARLGHHTEPNDV--EPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+G+V FSWG++ R G N++ + P + +LE IP+ Q+ +
Sbjct: 152 DGQV--FSWGSN-RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTS 208
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCT 234
+ ++ ++ + P I + LN+ +DG+V T
Sbjct: 209 FGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNV--VYISCGYEHTSVLTEDGQVFT 266
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESA 293
+G L H P++++ + + G Y T V G V S G G S
Sbjct: 267 FGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSC 325
Query: 294 S 294
+
Sbjct: 326 T 326
Score = 97 (39.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 234 TWGWG--RYGCLG-HGNE-ECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++GWG R G L GN + E + P + AL + ++++ G T V++EDG V++F
Sbjct: 208 SFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTF 267
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
G S L H+ G+G PQL+ + V QI + Y HT A
Sbjct: 268 GGSSSEQLQHSP-RSGRGG-------PQLIEG---IGGHVSQIECGS--Y---HTIAYVY 311
Query: 347 ESGKLYAFGAG 357
+G++ + G G
Sbjct: 312 TTGQVVSLGRG 322
Score = 89 (36.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 24/103 (23%), Positives = 53/103 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
++L+ +VY+ G +S G+ + Q TK P +++L + + + G + +
Sbjct: 40 SLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEP--IQALSTVHIDLVSCGKEHSVAVC 97
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
+GRV+T+ G++ +LG E ++ P + +L I ++Q+
Sbjct: 98 HQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQV 139
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 13/65 (20%), Positives = 30/65 (46%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
P+ +E+ + +++AA G + +L RVY+ + +LG + + P + L
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQAL 78
Query: 152 ENIPV 156
+ +
Sbjct: 79 STVHI 83
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 154 (59.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 48/136 (35%), Positives = 68/136 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
QDGR+ WG G +G G E P+ V + V+ G Y + V+ DG +Y+F
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGALYTF 215
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G +S LG + + AN PQ VT + +RVVQ++ HT ALTE
Sbjct: 216 GEKDSGKLGLST------EKLANHKVPQQVTDIP---DRVVQVACGGG-----HTVALTE 261
Query: 348 SGKLYAFGAGDKGQLG 363
+ ++Y+FG G GQLG
Sbjct: 262 N-EVYSFGLGQFGQLG 276
Score = 123 (48.4 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 46/147 (31%), Positives = 72/147 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYS 286
DG + T+G G LG E+ + KV Q + D+ + + VA G T ++E+ +VYS
Sbjct: 209 DGALYTFGEKDSGKLGLSTEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYS 266
Query: 287 FGCGESASLGHNA-IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
FG G+ LGH I + + P++V ++ RV + + HT +
Sbjct: 267 FGLGQFGQLGHGTFIFESR--------LPRVVEHFRK--GRVKHAACGEN-----HTALI 311
Query: 346 TESGKLYAFGAGDKGQLGI--ELVNNQ 370
T++G LY FG G G+LG+ E NQ
Sbjct: 312 TDNGLLYTFGDGRHGKLGLGEENFTNQ 338
Score = 102 (41.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T L+++ G+++ FG +++G+ G + T V P V++LK+ V A G T V +
Sbjct: 48 TALVTENGKLFMFGSNNWGQLGLGTKTT--VNKPTCVKALKSERVKLTACGRTHTLVFTS 105
Query: 119 EGRVYTFSWGNDARLG 134
G +Y N+ +LG
Sbjct: 106 RGNLYACGGNNEGQLG 121
Score = 79 (32.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLS 117
T++ + G +YA G ++ G+ G + TS LVE K + A G+ +A L+
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR--TSFHLVEFFNKQGPIKMLAAGSNTSAALT 157
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEP 144
++GR+Y + ++ ++G E N + P
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTP 184
Score = 79 (32.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 301 ADGQ-G-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
++GQ G + +N LTPQ V+ V +RV +S Y+ H+ +T G LY FG D
Sbjct: 169 SEGQIGLGKESNALTPQEVS----VGKRVFWVSCG---YY--HSAFVTVDGALYTFGEKD 219
Query: 359 KGQLGI---ELVNNQTER---GNPERV 379
G+LG+ +L N++ + P+RV
Sbjct: 220 SGKLGLSTEKLANHKVPQQVTDIPDRV 246
Score = 61 (26.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
I ++G V+ FGK F + +P LKN ++ + G+ TA+++ G+
Sbjct: 9 IPESGAVFTFGKSKFAD-----------NAPSKFW-LKNDVPLRISCGDEHTALVTENGK 56
Query: 122 VYTFSWGNDARLGHHTEPNDVEP 144
++ F N +LG T+ +P
Sbjct: 57 LFMFGSNNWGQLGLGTKTTVNKP 79
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 147 (56.8 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
+ G+++ +G+ + G +G L+ + P +V +D+
Sbjct: 136 DDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDV 172
Score = 146 (56.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 229 DGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
DGRV WG R G +G +S VP VQ DV + VA+G+ +++ DGD+Y
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 286 SFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
+ GCGE LG + +G R +L P+ V LK R + ++ T
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKSRGSRG-HVRFQDAFCGAYFT 252
Query: 343 FALTESGKLYAFGAGDKGQLG 363
FA++ G +Y FG + QLG
Sbjct: 253 FAISHEGHVYGFGLSNYHQLG 273
Score = 87 (35.7 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 200 (75.5 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 67/242 (27%), Positives = 106/242 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS
Sbjct: 96 TLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 118 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+ V F WG + +LG + L+ +L IP +QI SG
Sbjct: 154 KASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG 209
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
A++ D P L++ + + ++G V T+
Sbjct: 210 -AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTF 266
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 294
G G YG LGH + E P+ V L +A G +T+ V G +YSFG G +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
Query: 295 LG 296
LG
Sbjct: 327 LG 328
Score = 166 (63.5 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGHN+ + H + P+ V L + V QI+ HT A S
Sbjct: 269 GGYGQLGHNSTS------HE--INPRKVFEL--MGSIVTQIACGRQ-----HTSAFVPSS 313
Query: 349 GKLYAFGAGDKGQLGIELVNNQ----TERGN 375
G++Y+FG G GQLG +N+ T +GN
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 159 (61.0 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 52/176 (29%), Positives = 83/176 (47%)
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWGWGRYGCLGH-GNEECESVP 254
EK + EQ L+ Q D G+V WG G LG G+EEC VP
Sbjct: 69 EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVP 128
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ +++L+D++ + VA G Y + +S+ +V+ +G + LG Q + P
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-------P 181
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
QL+ SL + +QI+ AH+F LT SG ++ +G GQLG+ N++
Sbjct: 182 QLIKSLLGIP--FMQIAAGG-----AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/164 (23%), Positives = 72/164 (43%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
+P +SL + +++ +G ++ +G++ FG+ + + V P L++
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 237
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I V
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 296
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
QI PS +YS S ++ K P
Sbjct: 297 TQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V T G G LGH E+ P+ V AL+ + V+ G+ T +++ G VY++G
Sbjct: 52 DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G+ + P+ + SL + ++VQ++ Y+ H+ AL+++
Sbjct: 110 LDSDGQLGL------LGSEEC-IRVPRNIKSLSDI--QIVQVACG---YY--HSLALSKA 155
Query: 349 GKLYAFGAGDKGQLGI 364
+++ +G GQLG+
Sbjct: 156 SEVFCWGQNKYGQLGL 171
Score = 81 (33.6 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V + G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY + +D +LG + + +L +I +VQ+
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQV 142
Score = 61 (26.5 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 131 ARLGHHTEPNDVEPHPLLGT-LENIPVV 157
+LGH E + +P ++ +NI V
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAV 89
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 163 (62.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 45/136 (33%), Positives = 69/136 (50%)
Query: 230 GRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GRV TWG G G LG G ++E +P + +L +K I V+ G Y + +SEDG V+S+G
Sbjct: 99 GRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 158
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG GN + +PQ V SL+ + + Q++ + H+FAL+
Sbjct: 159 SNRQGQLG-------LGNNLCSQASPQKVKSLEGIP--LAQVAAGGT-----HSFALSLM 204
Query: 349 GKLYAFGAGDKGQLGI 364
G + +G GQL +
Sbjct: 205 GTSFGWGNNRSGQLAL 220
Score = 158 (60.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 50/154 (32%), Positives = 77/154 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG+V +WG R G LG GN C ++ P+ V++L + VA G +F +S G S
Sbjct: 150 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT--S 207
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G + S G A++ + P + +LK +N VV IS Y HT LT
Sbjct: 208 FGWGNNRS-GQLALSGNSAKEQ--IYKPHSIGALKTLN--VVYISCG---Y--EHTSVLT 257
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
E G+++ FG QL + ++ RG P+ ++
Sbjct: 258 EDGQVFTFGGSSSEQLQH---SPRSGRGGPQLIE 288
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/149 (28%), Positives = 78/149 (52%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
RV + G G LG + + P+ +QAL+ V V+ G + V G V+++G G
Sbjct: 48 RVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAG 107
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
LG I + ++ + + P + SL + +++Q+S + Y H+ AL+E G+
Sbjct: 108 SEGQLG---IGE---SKEISFM-PTKINSLAGI--KIIQVSCGH--Y---HSLALSEDGQ 153
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERV 379
++++G+ +GQLG L NN + +P++V
Sbjct: 154 VFSWGSNRQGQLG--LGNNLCSQASPQKV 180
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 51/240 (21%), Positives = 95/240 (39%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 92 SVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 150
Query: 119 EGRVYTFSWGNDARLGHHTEPNDV--EPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+G+V FSWG++ R G N++ + P + +LE IP+ Q+ +
Sbjct: 151 DGQV--FSWGSN-RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTS 207
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
+ ++ P I + LN+ +DG+V T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV--VYISCGYEHTSVLTEDGQVFTF 265
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESAS 294
G L H P++++ + + G Y T V G V S G G S +
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 324
Score = 101 (40.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 39/130 (30%), Positives = 61/130 (46%)
Query: 234 TWGWG--RYGCLG-HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
++GWG R G L GN E + P + AL + ++++ G T V++EDG V++FG
Sbjct: 207 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 266
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-E 347
S L H+ G+G PQL+ + V QI + Y HT A
Sbjct: 267 GSSSEQLQHSP-RSGRGG-------PQLIEG---IGGHVSQIECGS--Y---HTIAYVYT 310
Query: 348 SGKLYAFGAG 357
+G++ + G G
Sbjct: 311 TGQVVSLGRG 320
Score = 90 (36.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 24/103 (23%), Positives = 54/103 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
++L+ +VY+ G +S G+ + Q TK P+ +++L + + + G + +
Sbjct: 40 SLLLFSNHRVYSCGDNSRGQLGQKSPQSTK---RPEPIQALSTVHIDLVSCGKEHSVAVC 96
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
+GRV+T+ G++ +LG E ++ P + +L I ++Q+
Sbjct: 97 HQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQV 138
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
P+ +E+ + +++AA G + +L RVY+ + +LG + + P P+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 74
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 199 (75.1 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 66/242 (27%), Positives = 106/242 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS
Sbjct: 96 TLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 118 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+ V F WG + +LG + L+ +L IP +Q+ SG
Sbjct: 154 KASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG 209
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
A++ D P L++ + + ++G V T+
Sbjct: 210 -AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTF 266
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 294
G G YG LGH + E P+ V L +A G +T+ V G +YSFG G +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
Query: 295 LG 296
LG
Sbjct: 327 LG 328
Score = 166 (63.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGHN+ + H + P+ V L + V QI+ HT A S
Sbjct: 269 GGYGQLGHNSTS------HE--INPRKVFEL--MGSIVTQIACGRQ-----HTSAFVPSS 313
Query: 349 GKLYAFGAGDKGQLGIELVNNQ----TERGN 375
G++Y+FG G GQLG +N+ T +GN
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 158 (60.7 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 51/176 (28%), Positives = 83/176 (47%)
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWGWGRYGCLGH-GNEECESVP 254
EK + EQ L+ Q D G+V WG G LG G+EEC VP
Sbjct: 69 EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVP 128
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ +++L+D++ + VA G Y + +S+ +V+ +G + LG Q + P
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-------P 181
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
QL+ SL + +Q++ AH+F LT SG ++ +G GQLG+ N++
Sbjct: 182 QLIKSLLGIP--FMQVAAGG-----AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 38/164 (23%), Positives = 72/164 (43%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
+P +SL + +++ +G ++ +G++ FG+ + + V P L++
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 237
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I V
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 296
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
QI PS +YS S ++ K P
Sbjct: 297 TQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V T G G LGH E+ P+ V AL+ + V+ G+ T +++ G VY++G
Sbjct: 52 DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G+ + P+ + SL + ++VQ++ Y+ H+ AL+++
Sbjct: 110 LDSDGQLGL------LGSEEC-IRVPRNIKSLSDI--QIVQVACG---YY--HSLALSKA 155
Query: 349 GKLYAFGAGDKGQLGI 364
+++ +G GQLG+
Sbjct: 156 SEVFCWGQNKYGQLGL 171
Score = 81 (33.6 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V + G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY + +D +LG + + +L +I +VQ+
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQV 142
Score = 61 (26.5 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 131 ARLGHHTEPNDVEPHPLLGT-LENIPVV 157
+LGH E + +P ++ +NI V
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAV 89
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 199 (75.1 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 66/242 (27%), Positives = 106/242 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS
Sbjct: 96 TLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 118 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
+ V F WG + +LG + L+ +L IP +Q+ SG
Sbjct: 154 KASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG 209
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
A++ D P L++ + + ++G V T+
Sbjct: 210 -AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTF 266
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 294
G G YG LGH + E P+ V L +A G +T+ V G +YSFG G +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
Query: 295 LG 296
LG
Sbjct: 327 LG 328
Score = 166 (63.5 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ES 348
G LGHN+ + H + P+ V L + V QI+ HT A S
Sbjct: 269 GGYGQLGHNSTS------HE--INPRKVFEL--MGSIVTQIACGRQ-----HTSAFVPSS 313
Query: 349 GKLYAFGAGDKGQLGIELVNNQ----TERGN 375
G++Y+FG G GQLG +N+ T +GN
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 158 (60.7 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 51/176 (28%), Positives = 83/176 (47%)
Query: 197 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWGWGRYGCLGH-GNEECESVP 254
EK + EQ L+ Q D G+V WG G LG G+EEC VP
Sbjct: 69 EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVP 128
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ +++L+D++ + VA G Y + +S+ +V+ +G + LG Q + P
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-------P 181
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
QL+ SL + +Q++ AH+F LT SG ++ +G GQLG+ N++
Sbjct: 182 QLIKSLLGIP--FMQVAAGG-----AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/164 (23%), Positives = 72/164 (43%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
+P +SL + +++ +G ++ +G++ FG+ + + V P L++
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 237
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I V
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 296
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHP 200
QI PS +YS S ++ K P
Sbjct: 297 TQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V T G G LGH E+ P+ V AL+ + V+ G+ T +++ G VY++G
Sbjct: 52 DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G+ + P+ + SL + ++VQ++ Y+ H+ AL+++
Sbjct: 110 LDSDGQLGL------LGSEEC-IRVPRNIKSLSDI--QIVQVACG---YY--HSLALSKA 155
Query: 349 GKLYAFGAGDKGQLGI 364
+++ +G GQLG+
Sbjct: 156 SEVFCWGQNKYGQLGL 171
Score = 81 (33.6 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ + D G VY G + G+ + K P+ V +L +V + G T L+
Sbjct: 46 TVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALND 101
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G+VY + +D +LG + + +L +I +VQ+
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQV 142
Score = 61 (26.5 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 71 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 131 ARLGHHTEPNDVEPHPLLGT-LENIPVV 157
+LGH E + +P ++ +NI V
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAV 89
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 132 (51.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G+V TWG G+ LG E + + Q L I V G Y +F + G VY++G
Sbjct: 245 GKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWG 304
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
+ G + +G A + P LV +L+ N + S+T + HT AL E
Sbjct: 305 LNITRQCGIEVEDEEEG---AVITKPTLVDALEGYNVK----SITGGEH---HTLALLED 354
Query: 349 GKLYAFGAGDKGQLGI 364
G++ A+G D+ QLGI
Sbjct: 355 GRVLAWGRDDRHQLGI 370
Score = 115 (45.5 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 233 CTWGWGRYGC----LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
C + WG + C LG+ + + + L ++ +ATG ++ G VY++G
Sbjct: 194 CCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI--CQLATGTDHIIALTTTGKVYTWG 251
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G+ LG + R LTPQ + +LK + IS+ Y H+FA+
Sbjct: 252 NGQQFQLGRRMLE----RRRLQGLTPQPL-ALKNI------ISVGAGSY---HSFAIDNK 297
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G++YA+G Q GIE+ + +
Sbjct: 298 GRVYAWGLNITRQCGIEVEDEE 319
Score = 110 (43.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
VY FG S E G + +V P+L + S + VV A+G +A LS +GRVYT+
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 126 SWGNDARLGHHTE 138
+D LG T+
Sbjct: 133 GVNDDYALGRLTK 145
Score = 107 (42.7 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 230 GRVCTWGWG---RYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
GRV WG + G EE + P +V AL + G++ T + EDG V
Sbjct: 298 GRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRV 357
Query: 285 YSFGCGESASLG--HNA-----IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
++G + LG NA + D +GN + + TP ++ L V +Q+ +
Sbjct: 358 LAWGRDDRHQLGIPDNALPETVVKDEKGNNYY-LSTPTIIPGLTNV----IQV-----VC 407
Query: 338 WNAHTFALTESGKLYAFGAGDKGQLG 363
H A+T GK+Y++G+ + ++G
Sbjct: 408 GTHHNLAVTSDGKVYSWGSAENYEVG 433
Score = 85 (35.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 43/160 (26%), Positives = 70/160 (43%)
Query: 229 DGRVCTWGWGRYGCLG---------HG----NEECESVP-KVVQALNDVKAIHVATGDYT 274
DGRV TWG LG +G N+ E P KV AL+ ++ V D
Sbjct: 126 DGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNL 185
Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
T ++++G +++G + G +D Q R A P T ++ + Q++
Sbjct: 186 TAAITDNGCCFTWGTFRCSD-GVLGYSDSQ-KRTAE---P---TQMRL--PEICQLATGT 235
Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
H ALT +GK+Y +G G + QLG ++ + +G
Sbjct: 236 D-----HIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 122 VYTFSWGNDARLGHHTEPNDV--EP--HPLLGTLENIPVVQI 159
VY F G+ LG E DV P +P+L T + + VV +
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILST-DKVGVVDL 113
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/158 (31%), Positives = 76/158 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V L DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDID 382
E G+++ +G+ + G +G L+ + P +V +D
Sbjct: 136 EDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLD 171
Score = 145 (56.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 46/142 (32%), Positives = 69/142 (48%)
Query: 228 QDGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+DGRV WG R G +G +S VP VQ D + VA+G+ +++ DGD+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DAPVVKVASGNDHLVMLTNDGDL 193
Query: 285 YSFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
Y+ GCGE LG + +G R +L P+ V LK R ++ ++
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVL-LKSRGTRG-RVRFQDAFCGAYF 251
Query: 342 TFALTESGKLYAFGAGDKGQLG 363
TFA++ G +Y FG + QLG
Sbjct: 252 TFAISREGHVYGFGLSNYHQLG 273
Score = 103 (41.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 79 TVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 134
Query: 117 SREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +GRV F WG N+ +G EP P+ L+ PVV++
Sbjct: 135 TEDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-APVVKV 177
Score = 98 (39.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G Y TF +S +G VY FG LG G G+ PQ +TS K N +
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLG----TPGTGS----CFIPQNLTSFK--NSTKSWV 297
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ + HT + GK Y+ G + G+LG+
Sbjct: 298 GFSGGQH---HTVCMDSEGKAYSLGRAEYGRLGL 328
Score = 93 (37.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+GR G LG G EE +S+P ++ L V + VA G + VS+DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPVVSS--VACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
GQ + +P +T KQ+ RVV
Sbjct: 379 -----TGQDE---DAWSPVEMTG-KQLENRVV 401
Score = 91 (37.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV L++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
Score = 86 (35.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 228 QDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVY 285
++G V +G Y LG G C + N K+ + + G + T + +G Y
Sbjct: 257 REGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAY 316
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
S G E LG G+G ++ P L++ L V+ ++ S+ +A+
Sbjct: 317 SLGRAEYGRLGL-----GEGAEEKSI--PTLISRLPVVSS----VACGASV-----GYAV 360
Query: 346 TESGKLYAFGAGDKGQLG 363
++ G+++A+G G QLG
Sbjct: 361 SKDGRVFAWGMGTNYQLG 378
Score = 65 (27.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T +++ G+V+ +G SF + GV G + S V+ + VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVML 187
Query: 117 SREGRVYTFSWGNDARLGHHTE 138
+ +G +YT G +LG E
Sbjct: 188 TNDGDLYTLGCGEQGQLGRVPE 209
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + +WG G LG G+ E P +++AL++ K +A G T ++++DG V++FG
Sbjct: 209 GNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGA 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTES 348
G+ LGHN+ N L P+LVT L RV Q++ + W HT A +++
Sbjct: 269 GKYGQLGHNSTQ--------NELRPRLVTEL--AGNRVTQVACGSR--W--HTLAYVSDL 314
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
GK+++FG+G +GQLG +NQ
Sbjct: 315 GKVFSFGSGKEGQLGNGGTHNQ 336
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 54/199 (27%), Positives = 82/199 (41%)
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIX 160
++Q G++ + LS+ F+WG + +LG + L+ L +P+VQI
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQIS 196
Query: 161 XXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXX 220
SG +YS E P LIE N +
Sbjct: 197 AGKAHSMALSM--SGN-IYSWGRNDLGQLGLGHTNGEDFPSLIEALD--NQKVEFLACGG 251
Query: 221 XXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD--YTTFVV 278
+DG V T+G G+YG LGH + + E P++V L + VA G +T V
Sbjct: 252 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYV 311
Query: 279 SEDGDVYSFGCGESASLGH 297
S+ G V+SFG G+ LG+
Sbjct: 312 SDLGKVFSFGSGKEGQLGN 330
Score = 137 (53.3 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 33/101 (32%), Positives = 57/101 (56%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M +S +G +Y++G++ G+ G+ T P L+E+L N V A G TA+L++
Sbjct: 202 SMALSMSGNIYSWGRNDLGQL--GLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK 259
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G V+TF G +LGH++ N++ P L+ L V Q+
Sbjct: 260 DGLVFTFGAGKYGQLGHNSTQNELRPR-LVTELAGNRVTQV 299
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/192 (26%), Positives = 82/192 (42%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G+++A+G++ G+ G T + T PQLVE L + +VQ + G + LS G +Y
Sbjct: 156 GELFAWGQNLHGQLGVGRLFTSIPT-PQLVEHLSGVPLVQISAGKAHSMALSMSGNIY-- 212
Query: 126 SWG-ND-ARLG-HHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 182
SWG ND +LG HT D P L+ L+N V + G+ V++
Sbjct: 213 SWGRNDLGQLGLGHTNGEDF-PS-LIEALDNQKVEFLACGGSHTALLTKD--GL-VFTFG 267
Query: 183 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 242
S +E PRL+ + + G+V ++G G+ G
Sbjct: 268 AGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQ 327
Query: 243 LGHGNEECESVP 254
LG+G + +P
Sbjct: 328 LGNGGTHNQLIP 339
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVS--EDGDVYSFGCGESASLGHNAIADGQ 304
N E + L + I + GDY + +S + G+++++G +L H + G
Sbjct: 119 NYSIEHASRFQCILQEKSIIQITCGDYHSLALSKGQGGELFAWG----QNL-HGQL--GV 171
Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
G ++ TPQLV L V +VQIS AH+ AL+ SG +Y++G D GQLG+
Sbjct: 172 GRLFTSIPTPQLVEHLSGVP--LVQISAGK-----AHSMALSMSGNIYSWGRNDLGQLGL 224
Query: 365 ELVNNQ 370
N +
Sbjct: 225 GHTNGE 230
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 140 (54.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY-TTFVVS------ED 281
+G++ T+G G +G LGHG+ ++P+ V+ALN + I A G + + VVS
Sbjct: 424 EGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSS 483
Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
G ++++G G+ LGH G+ ++ P VT L + + Q++ SI
Sbjct: 484 GKLFTWGDGDDGRLGH-------GDIECRLI-PSCVTELDTTSFQ--QVACGQSI----- 528
Query: 342 TFALTESGKLYAFGAGD 358
T AL+ SG++YA G D
Sbjct: 529 TVALSMSGQVYAMGTAD 545
Score = 129 (50.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 45/172 (26%), Positives = 78/172 (45%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
TD P++++ L+ Q + G++ +WG G LGHG C VP
Sbjct: 285 TDSFLPKVLKSHVALDAQSISCGTNYAVLVT--KQGQMYSWGEESGGRLGHG--VCSYVP 340
Query: 255 --KVVQALNDVKAIHVAT-GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
K++ N + +A G++ T V+ GD+Y++G G+ HNA G G+ ++
Sbjct: 341 HPKLIDEFNG-STVELADCGEFHTCAVTASGDLYAWGDGD-----HNAGLLGLGSGASHW 394
Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+++ ++ + + + W HT +T GKL+ FG G G LG
Sbjct: 395 KPVRILGQMEGIYVKAISCGP-----W--HTAFVTSEGKLFTFGDGTFGALG 439
Score = 114 (45.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 45/170 (26%), Positives = 76/170 (44%)
Query: 199 HPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY--GCLGHGNEECESVPKV 256
HP+LI++F ++ D + WG G + G LG G+ P
Sbjct: 341 HPKLIDEFNGSTVELADCGEFHTCAVTASGD--LYAWGDGDHNAGLLGLGSGASHWKP-- 396
Query: 257 VQALNDVKAIHV---ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
V+ L ++ I+V + G + T V+ +G +++FG G +LGH G+R + +
Sbjct: 397 VRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGH-------GDRISTNI- 448
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P+ V +L + +S + T SGKL+ +G GD G+LG
Sbjct: 449 PREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLG 498
Score = 106 (42.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L++ GQ+Y++G++S G +GV V P+L++ V A G F T ++
Sbjct: 312 VLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPKLIDEFNGSTVELADCGEFHTCAVTAS 369
Query: 120 GRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
G +Y + G N LG + + +P +LG +E I V I
Sbjct: 370 GDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAI 411
Score = 94 (38.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVL- 116
T ++ G+++ FG +FG +G ++ T+ P+ VE+L ++AA G + +A +
Sbjct: 418 TAFVTSEGKLFTFGDGTFGALGHG---DRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474
Query: 117 ------SREGRVYTFSWGNDARLGH 135
+ G+++T+ G+D RLGH
Sbjct: 475 SVFGEATSSGKLFTWGDGDDGRLGH 499
Score = 86 (35.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T ++ +G +YA+G G+ G +++ ++ I+V + G + TA ++
Sbjct: 363 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 422
Query: 118 REGRVYTFSWGNDARLGH 135
EG+++TF G LGH
Sbjct: 423 SEGKLFTFGDGTFGALGH 440
Score = 82 (33.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 277
V TWG G G LGHG+ E +P +V+AL + V G +YT +
Sbjct: 585 VYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 64 (27.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 86 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 140
+ L+T L + LK+ + A + G + +++++G++Y SWG ++ RLGH
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 336
Query: 141 DVEPHPLL 148
PHP L
Sbjct: 337 SYVPHPKL 344
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
+G F+ VLS+ + S H + P +E P
Sbjct: 183 LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPETIENRP 221
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 168 (64.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 48/147 (32%), Positives = 74/147 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQA----LND----VKAIHVATGDYTTFV 277
++G + WG+ G LG G CE + P+V+ A L++ VK + ++ G+Y T
Sbjct: 183 EEGLLQAWGYNEQGQLGRG-VTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAA 241
Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
+S+ G+VY++G G LGH ++ G L P+ V L V+ + V
Sbjct: 242 LSDAGEVYTWGLGSMGQLGHVSLQSGDKE-----LIPRRVVGLDGVSMKEVACG------ 290
Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGI 364
HT AL+ G LYA+G G GQLG+
Sbjct: 291 -GVHTCALSLEGALYAWGGGQAGQLGL 316
Score = 116 (45.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 51/191 (26%), Positives = 83/191 (43%)
Query: 198 KHPRLIEQFQ--LLNLQPXXXXXXXXXXXXXGQDGRVCT---WGWGRYGCLGHGNEECES 252
KHP+ ++Q Q + DG + T W WG+ G+ +
Sbjct: 102 KHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQ----NQGS----N 153
Query: 253 VPKVVQ-ALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHA 309
+P++ A AI V+ G +SE+G + ++G E LG +G Q R
Sbjct: 154 LPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVI 213
Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG-IELVN 368
N L + + V +++Q+S Y HT AL+++G++Y +G G GQLG + L +
Sbjct: 214 NAYAKFLDEAPELV--KIMQLSCGE--Y---HTAALSDAGEVYTWGLGSMGQLGHVSLQS 266
Query: 369 NQTERGNPERV 379
E P RV
Sbjct: 267 GDKEL-IPRRV 276
Score = 110 (43.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 38/139 (27%), Positives = 60/139 (43%)
Query: 230 GRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
G V TWG G G LGH + + E +P+ V L+ V VA G T +S +G +Y+
Sbjct: 246 GEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYA 305
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G G++ LG Q +V + L+ V V+ + ++HT
Sbjct: 306 WGGGQAGQLGLGP----QSGFFFSVSNGSEML-LRNVPVLVIPTDVRLVACGHSHTLVYM 360
Query: 347 ESGKLYAFGAGDKGQLGIE 365
G++ +G GQ E
Sbjct: 361 REGRICGWGYNSYGQAANE 379
Score = 103 (41.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T +SDAG+VY +G S G+ + +Q P+ V L + + + A G T LS
Sbjct: 239 TAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALS 298
Query: 118 REGRVYTFSWGNDARLG 134
EG +Y + G +LG
Sbjct: 299 LEGALYAWGGGQAGQLG 315
Score = 66 (28.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T ++ G ++A+G + +G+ G + G K P+ V+ L++ FV + G F TA ++
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRK---HPKKVKQLQSEFVKFVSCGAFCTAAIA 129
Query: 118 --RE--GRVYT---FSWGND 130
RE G + T + WG +
Sbjct: 130 EPRENDGTLSTSRLWVWGQN 149
Score = 55 (24.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 228 QDGRVCTWGWGRYG 241
++GR+C WG+ YG
Sbjct: 361 REGRICGWGYNSYG 374
Score = 46 (21.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSP-QLVESL------KNIFVVQAAIGNFFTAVLSREG 120
+Y +G + G+ Q KL+ P QL L N + + G TA ++ +G
Sbjct: 22 IYVWGYNQSGQTGRNEQ-EKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDG 80
Query: 121 RVYTFSWG-ND-ARLGHHTEPNDVEP 144
+ F+WG N+ +LG TE P
Sbjct: 81 SL--FAWGANEYGQLGDGTEVGRKHP 104
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V DV + G T +S+ G VYS
Sbjct: 50 EPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYS 107
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 108 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 152
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
+ G+++ +G+ + G +G L+ + P +V +D+
Sbjct: 153 DDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDV 189
Score = 146 (56.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 229 DGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
DGRV WG R G +G +S VP VQ DV + VA+G+ +++ DGD+Y
Sbjct: 154 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 211
Query: 286 SFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
+ GCGE LG + +G R +L P+ V LK R + ++ T
Sbjct: 212 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKSRGSRG-HVRFQDAFCGAYFT 269
Query: 343 FALTESGKLYAFGAGDKGQLG 363
FA++ G +Y FG + QLG
Sbjct: 270 FAISHEGHVYGFGLSNYHQLG 290
Score = 104 (41.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 96 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 151
Query: 117 SREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +GRV F WG N+ +G EP P+ L+ +PVV++
Sbjct: 152 TDDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 194
Score = 98 (39.6 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 44/152 (28%), Positives = 59/152 (38%)
Query: 229 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 272
DG + T G G G LG G + E VPK V + HV G
Sbjct: 207 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 266
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
Y TF +S +G VY FG LG G + PQ +TS K N +
Sbjct: 267 YFTFAISHEGHVYGFGLSNYHQLGT------PGTESCFI--PQNLTSFK--NSTKSWVGF 316
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ + HT + GK Y+ G + G+LG+
Sbjct: 317 SGGQH---HTVCMDSEGKAYSLGRAEYGRLGL 345
Score = 87 (35.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 49 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 105
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 106 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 141
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 146 (56.5 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG E E P++++AL ++ VA G + + +SE GD+Y +G
Sbjct: 180 GQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGW 239
Query: 290 GESASL 295
ES L
Sbjct: 240 NESGQL 245
Score = 105 (42.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + LS
Sbjct: 174 LLLCAAGQVFSWGAGRHGQLGHGTLEAEL--EPRLLEALQGLRMAKVAAGGWHSVCLSET 231
Query: 120 GRVYTFSWGNDARL 133
G +Y + W +L
Sbjct: 232 GDIYIWGWNESGQL 245
Score = 84 (34.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGD 283
G + TWGWG+YG LGH + P V+ ++ V G + T+V + + D
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMERD 375
Score = 64 (27.6 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
HT +T +G+LY +G G GQLG
Sbjct: 312 HTAVVTRTGELYTWGWGKYGQLG 334
Score = 63 (27.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 303 AVMASCGSRHTAVVTRTGELYTWGWGKYGQLGH 335
Score = 57 (25.1 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
G + FG FG+A V SP+ + + +I V A G +TA+++R GRV
Sbjct: 7 GAWFGFGFCGFGQALGSGNSHHSVYSPEPLHASDDICQVSA--GWSYTALVTRGGRV 61
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 147 (56.8 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
+ G+++ +G+ + G +G L+ + P +V +D+
Sbjct: 136 DDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDV 172
Score = 140 (54.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 229 DGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
DGRV WG R G +G +S VP VQ DV + VA+G+ +++ DGD+Y
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 286 SFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
+ GCGE LG + +G R +L P+ V LK R + ++ T
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKSRGSRG-HVRFQDAFCGAYFT 252
Query: 343 FALTESGKLYAFGAGDKGQL 362
FA++ G +Y FG + QL
Sbjct: 253 FAISHEGHVYGFGLSNYHQL 272
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 228 QDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
+ G+V ++G G LG E E VP V+ L + K + V+ GD T +++DG V+
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTDDGRVF 141
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G +N + G + P V Q++ VV+++ N H L
Sbjct: 142 LWGSFRD----NNGVI-GLLEPMKKSMVPVQV----QLDVPVVKVASGND-----HLVML 187
Query: 346 TESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 379
T G LY G G++GQLG EL N+ R ER+
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERL 223
Score = 87 (35.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 152 (58.6 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG E E P+V++AL + VA G + + VSE GD+Y +G
Sbjct: 183 GQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGW 242
Query: 290 GESASL 295
ES L
Sbjct: 243 NESGQL 248
Score = 94 (38.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 18/74 (24%), Positives = 40/74 (54%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ AGQV+++G G+ +G + P+++E+L+ + + + A G + + +S
Sbjct: 177 LLLDAAGQVFSWGGGRHGQLGHGTLEAE--REPRVLEALQGLPMAEVAAGGWHSVCVSET 234
Query: 120 GRVYTFSWGNDARL 133
G +Y + W +L
Sbjct: 235 GDIYIWGWNESGQL 248
Score = 83 (34.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFV 277
G + TWGWG+YG LGH + P V+ D K + V T G + T+V
Sbjct: 325 GELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVD-KQLQVRTVSCGPWNTYV 374
Score = 65 (27.9 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
HT +T +G+LY +G G GQLG + + T P RV+
Sbjct: 317 HTAVVTRTGELYTWGWGKYGQLGHK---DTTSLDRPCRVE 353
Score = 64 (27.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 308 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 340
Score = 48 (22.0 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRV 122
G + FG FG+A +G + V SP+ +E ++ V + + +TA ++R GR+
Sbjct: 7 GAWFGFGFCGFGQALGSGRGRQ-VYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRL 63
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 151 (58.2 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG+ E E P++++AL + VA G + + VSE GD+Y +G
Sbjct: 114 GQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGW 173
Query: 290 GESASL 295
ES L
Sbjct: 174 NESGQL 179
Score = 107 (42.7 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 20/74 (27%), Positives = 42/74 (56%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ +AGQV+++G+ G+ +G + P+L+E+L+ + V + A G + + +S
Sbjct: 108 LLLDEAGQVFSWGQGRHGQLGHG--SLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSET 165
Query: 120 GRVYTFSWGNDARL 133
G +Y + W +L
Sbjct: 166 GDIYIWGWNESGQL 179
Score = 83 (34.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFV--VSEDG 282
G + TWGWG+YG LGH + P V+ D ++ V+ G + T+V V ++G
Sbjct: 256 GELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGPWNTYVYAVEKEG 312
Score = 63 (27.2 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
HT +T +G+LY +G G GQLG + + T P RV+
Sbjct: 248 HTAVVTGTGELYTWGWGKYGQLGHK---DTTSLDRPCRVE 284
Score = 58 (25.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
+ + G T VV+ G++Y++G G+ LGH
Sbjct: 240 VKASCGSRHTAVVTGTGELYTWGWGKYGQLGH 271
Score = 45 (20.9 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSRE 119
G + FG FG+A +G + V SP+ +++ + V+ ++ +TA+++RE
Sbjct: 7 GSWFGFGFCGFGQAPGSGRGRQ-VLSPEPLQTPGSGADVRRVSASWSYTALVTRE 60
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 195 (73.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 83/318 (26%), Positives = 136/318 (42%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSR 118
L++ G+V+ +G++ G +G+Q ++ P+LVE +L NI V A G + T V+S
Sbjct: 265 LVTRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFV--ACGEYHTCVVST 320
Query: 119 EGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPS 174
G + FSWG N LGH ++ + P + G LE + V+ + +
Sbjct: 321 SGDL--FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATA--N 376
Query: 175 GMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX--XXXXXXXXGQDG-- 230
G +++ +R +P+ ++ L GQ
Sbjct: 377 GK-LFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATS 435
Query: 231 ----RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++
Sbjct: 436 MSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFT 495
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-L 345
G LG N+I+DG+ P LV + V E V +I+ AH A L
Sbjct: 496 MGGTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIAC------GAHHVAVL 539
Query: 346 TESGKLYAFGAGDKGQLG 363
T +++ +G G G+LG
Sbjct: 540 TSRSEVFTWGKGANGRLG 557
Score = 182 (69.1 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 84/312 (26%), Positives = 129/312 (41%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G+V+ G G A T ++T P+ +ES + V Q G A+++R+G V+T
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLT-PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFT- 274
Query: 126 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 183
WG + RLGH + D+ P L +E + + I + ++S
Sbjct: 275 -WGEEVGGRLGHGIQV-DIS-RPKL--VEFLALTNIDFVACGEYHTCVVSTSGDLFSWGD 329
Query: 184 XXXXXXXXXSRTDEKH--PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYG 241
+D H P+ + L LQ +G++ T+G G +G
Sbjct: 330 GIHNVGLLGHGSDISHWIPKRVSG-PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFG 388
Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGCGE 291
LGHGN E S PK VQ+LN +K + VA + T + E ++++G G+
Sbjct: 389 VLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGD 448
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LGH GN+ +L P V+SL N + T T ALT SG +
Sbjct: 449 KNRLGH-------GNKETYLL-PTCVSSLIDYNFHKIACGHT-------FTVALTTSGHV 493
Query: 352 YAFGAGDKGQLG 363
+ G GQLG
Sbjct: 494 FTMGGTAHGQLG 505
Score = 97 (39.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 24 NGKRNLLG---REVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
+G +N LG +E P SL T+ ++ +G V+ G + G+
Sbjct: 446 DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505
Query: 81 YGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
+ KL P LV+ L FV + A G AVL+ V+T+ G + RLGH
Sbjct: 506 NSISDGKL---PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGH 558
Score = 82 (33.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFV 277
V TWG G G LGHG+ E + P +V+AL D VK++ + ++T+ +
Sbjct: 545 VFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGS-NFTSSI 591
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
+ G+++ +G+ + G +G L+ + P +V +D+
Sbjct: 136 DDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDV 172
Score = 146 (56.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 229 DGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
DGRV WG R G +G +S VP VQ DV + VA+G+ +++ DGD+Y
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 286 SFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
+ GCGE LG + +G R +L P+ V LK R + ++ T
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKSRGSRG-HVRFQDAFCGAYFT 252
Query: 343 FALTESGKLYAFGAGDKGQLG 363
FA++ G +Y FG + QLG
Sbjct: 253 FAISHEGHVYGFGLSNYHQLG 273
Score = 104 (41.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 79 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 134
Query: 117 SREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +GRV F WG N+ +G EP P+ L+ +PVV++
Sbjct: 135 TDDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 177
Score = 98 (39.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 44/152 (28%), Positives = 59/152 (38%)
Query: 229 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 272
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
Y TF +S +G VY FG LG G + PQ +TS K N +
Sbjct: 250 YFTFAISHEGHVYGFGLSNYHQLGT------PGTESCFI--PQNLTSFK--NSTKSWVGF 299
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ + HT + GK Y+ G + G+LG+
Sbjct: 300 SGGQH---HTVCMDSEGKAYSLGRAEYGRLGL 328
Score = 97 (39.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 229 DGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVYS 286
+G V +G Y LG G E C + N K+ + + G + T + +G YS
Sbjct: 258 EGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 317
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
G E LG G+G ++ P L++ L V+ ++ S+ +A+T
Sbjct: 318 LGRAEYGRLGL-----GEGAEEKSI--PTLISRLPAVSS----VACGASV-----GYAVT 361
Query: 347 ESGKLYAFGAGDKGQLG 363
+ G+++A+G G QLG
Sbjct: 362 KDGRVFAWGMGTNYQLG 378
Score = 87 (35.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
Score = 72 (30.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 187
Query: 117 SREGRVYTFSWGNDARLGHHTE 138
+ +G +YT G +LG E
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPE 209
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 163 (62.4 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+GWG YG G G+ + E P V +L ++ VA G + T S DGDVY+FG
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGG 389
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
+ LG G A L P+L+ + N V IS HT +T+ G
Sbjct: 390 NQFGQLG-------TGCDQAETL-PKLLEAPNLENVNVKTISCGAR-----HTAVITDEG 436
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
+++ +G GQLGI + +R P V I
Sbjct: 437 RVFCWGWNKYGQLGI---GDVIDRNAPAEVRI 465
Score = 133 (51.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 48/221 (21%), Positives = 89/221 (40%)
Query: 61 LISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
L+S + S+G+A GV + +V +++ S +V + A G +AV++
Sbjct: 274 LVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGS----YVKKIACGGRHSAVITDT 329
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 179
G + TF WG + G + +++ P + +L I + ++ VY
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSP-TCVSSLLGIRIEEVAAGLWHTTCASSDGD---VY 385
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
+ E P+L+E L N+ +GRV WGW +
Sbjct: 386 AFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNK 445
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
YG LG G+ + P V+ + D ++A G + T ++ +
Sbjct: 446 YGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTLLLGQ 485
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVL 116
T S G VYAFG + FG+ G + T P+L+E+ L+N+ V + G TAV+
Sbjct: 375 TTCASSDGDVYAFGGNQFGQLGTGCDQAE--TLPKLLEAPNLENVNVKTISCGARHTAVI 432
Query: 117 SREGRVYTFSWGNDARLG 134
+ EGRV+ + W +LG
Sbjct: 433 TDEGRVFCWGWNKYGQLG 450
Score = 69 (29.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPL 147
P LV + +V A G T LS G+V+ + +G + +LG + V PHP+
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPI 281
Score = 58 (25.5 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
T+ +SD GQV+ +G G+ G + +LV+SP + ++
Sbjct: 246 TLALSDIGQVWGWGYGGEGQLGLGSR-VRLVSSPHPIPCIE 285
Score = 37 (18.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 228 QDGRVCTWGW 237
++ +V TWGW
Sbjct: 134 ENQQVYTWGW 143
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V L DV + G T +++ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLNQSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
E G+++ +G+ + G +G L+ + P +V +D+
Sbjct: 136 EDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDM 172
Score = 144 (55.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 46/142 (32%), Positives = 70/142 (49%)
Query: 228 QDGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+DGRV WG R G +G +S VP VQ D+ + VA+G+ +++ DGD+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDL 193
Query: 285 YSFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
Y+ GCGE LG + +G R +L P+ V LK R ++ ++
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVL-LKSRGSRG-RVRFQDAFCGAYL 251
Query: 342 TFALTESGKLYAFGAGDKGQLG 363
TFA++ G +Y FG + QLG
Sbjct: 252 TFAISREGHVYGFGLSNYHQLG 273
Score = 102 (41.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ ++ +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 79 TVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 134
Query: 117 SREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +GRV F WG N+ +G EP P+ L+ +PVV++
Sbjct: 135 TEDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-MPVVKV 177
Score = 99 (39.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 44/152 (28%), Positives = 60/152 (39%)
Query: 229 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQ-----ALNDVKAIHVATGD 272
DG + T G G G LG G + E VPK V + V+ G
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGA 249
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
Y TF +S +G VY FG LG G A+ PQ +TS K N +
Sbjct: 250 YLTFAISREGHVYGFGLSNYHQLG----TPGT----ASCFIPQNLTSFK--NSTKSWVGF 299
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ + HT + GK Y+ G + G+LG+
Sbjct: 300 SGGQH---HTICMDSEGKAYSLGRAEYGRLGL 328
Score = 93 (37.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+GR G LG G EE +S+P ++ L V + VA G + VS+DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPVVSS--VACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
GQ + +P +T KQ+ RVV
Sbjct: 379 -----TGQDE---DAWSPVEMTG-KQLENRVV 401
Score = 88 (36.0 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 30/98 (30%), Positives = 45/98 (45%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV L++ VVQA G T L++ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
Score = 88 (36.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 228 QDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVY 285
++G V +G Y LG G C + N K+ + + G + T + +G Y
Sbjct: 257 REGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAY 316
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
S G E LG G+G ++ P L++ L V+ ++ S+ +A+
Sbjct: 317 SLGRAEYGRLGL-----GEGAEEKSI--PTLISRLPVVSS----VACGASV-----GYAV 360
Query: 346 TESGKLYAFGAGDKGQLG 363
++ G+++A+G G QLG
Sbjct: 361 SKDGRVFAWGMGTNYQLG 378
Score = 66 (28.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVML 187
Query: 117 SREGRVYTFSWGNDARLGHHTE 138
+ +G +YT G +LG E
Sbjct: 188 TTDGDLYTLGCGEQGQLGRVPE 209
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 207 (77.9 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 78/300 (26%), Positives = 135/300 (45%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
++S+ +VY +G +S + G Q + + P++ S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKMALSFSDAQTIEA--GQYCTFVISTDG 422
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 179
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS-LGH 297
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGH 597
Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
G NR V P++V +L+ + R V +S+ ALT +G++YA+G G
Sbjct: 598 -----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAWGCG 642
Score = 198 (74.8 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 64/285 (22%), Positives = 126/285 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 117
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G +A ++
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
+G +YT+ G+ RLGH + N L+ + N+ V G
Sbjct: 528 EDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK----DGRT 582
Query: 178 VYSVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 236
V+S T+ + P+++E Q + ++ G+V WG
Sbjct: 583 VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS--TGQVYAWG 640
Query: 237 WGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
G CLG G+ E ++ PK+++ L + + ++ GD ++ D +VY++G + S+
Sbjct: 641 CG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWG---NNSM 695
Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 696 GQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 736
Score = 183 (69.5 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 50/138 (36%), Positives = 75/138 (54%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V +WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G+ LGH G N N+ P LV + V E +S +S HT AL++
Sbjct: 536 GEGDFGRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSK 578
Query: 348 SGK-LYAFGAGDK-GQLG 363
G+ +++FG GD G+LG
Sbjct: 579 DGRTVWSFGGGDNVGKLG 596
Score = 183 (69.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 71/284 (25%), Positives = 110/284 (38%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLS 117
T +IS G V A GK S+G G + E ++I V ++ G+ T +
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT 474
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 475 TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE--- 531
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 237
+Y+ P L++ N+ +DGR W +
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRT-VWSF 586
Query: 238 G---RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
G G LGHG+ PKVV+AL + V G ++ ++ G VY++GCG A
Sbjct: 587 GGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 644
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
LG G+ A L P+L+ L R+V IS+ +S W
Sbjct: 645 LGC-------GSSEATALRPKLIEELAAT--RIVDISIGDSHVW 679
Score = 181 (68.8 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 66/282 (23%), Positives = 118/282 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV++
Sbjct: 4095 SMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTS 4152
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+++TF G+ RLG N P + LE + Q+ G V
Sbjct: 4153 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--GSMV 4209
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + T + P+ ++ + ++ +DG V T+G
Sbjct: 4210 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTFGQD 4267
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
R L G + P+ + L V VA G T ++ GDVY++G LG
Sbjct: 4268 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL- 4326
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G N +V P LVT L+ N R + +S W A
Sbjct: 4327 ----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4361
Score = 176 (67.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAIGNF-FTAV 115
T +I G V A G+ S+G G V + ++ +L+ V Q + G+ +
Sbjct: 4040 TFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMA 4097
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
L+ G V+++ G+ +LGH P + L+ VVQ+ S
Sbjct: 4098 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVT---SD 4153
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCT 234
+++ + +++K P + + Q DG V
Sbjct: 4154 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVSADGSMVWA 4211
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
+G G YG LG GN +S P+ V L + VA G + +++DG VY+FG +
Sbjct: 4212 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRL 4269
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
+G + +G+ H PQ + L V V++ + HT AL +G +YA+
Sbjct: 4270 IG---LPEGRARNHNR---PQQIPVLAGV---VIEDVAVGA----EHTLALASTGDVYAW 4316
Query: 355 GAGDKGQLGIELVNNQTE 372
G+ +GQLG+ N+ E
Sbjct: 4317 GSNSEGQLGLGHTNHVRE 4334
Score = 149 (57.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 228 QDGRVCTWGWG---RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+DGR W +G G LGHG+ PKVV+AL + V G ++ ++ G V
Sbjct: 578 KDGRT-VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQV 636
Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
Y++GCG A LG G+ A L P+L+ L R+V IS+ +S W F
Sbjct: 637 YAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDSHVW---LFV 682
Query: 345 LTESGKLYAFGAGDKGQLG 363
+ ++YA+G GQ G
Sbjct: 683 M--DNEVYAWGNNSMGQCG 699
Score = 141 (54.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/231 (25%), Positives = 86/231 (37%)
Query: 68 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
VY +G G+ AE G + V P S Q G T V+ G V
Sbjct: 4000 VYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACG 4053
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
G+ RLG +D+ ++ L+ V Q+ V+S
Sbjct: 4054 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4112
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
+ ++ PR IE Q + DG++ T+G G YG LG G
Sbjct: 4113 GKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4170
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 296
N + +P+ V AL + VA G T VS DG V++FG G+ LG
Sbjct: 4171 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4221
Score = 136 (52.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 49/150 (32%), Positives = 75/150 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG GR+G L VP + + +A V G TFV+ +G V + CGE
Sbjct: 4000 VYLWGAGRHGQLAEAGRNV-MVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLA--CGE 4054
Query: 292 SASLGHNAIADGQGNRH-ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
S G GQGN +VLT ++++L + V L S + H+ ALTESG+
Sbjct: 4055 G-SYGRL----GQGNSDDLHVLT--VISAL----QGFVVTQLVTSCGSDGHSMALTESGE 4103
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
++++G GD G+LG N+ +R P +++
Sbjct: 4104 VFSWGDGDYGKLGHG--NSDRQR-RPRQIE 4130
Score = 133 (51.9 bits), Expect = 0.00013, P = 0.00013
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG L G +E PK+ + +D + I G Y TFV+S DG V + CG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEA--GQYCTFVISTDGSVRA--CGK 429
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
S G + D LT + S+K+V+ S S + HT A T G++
Sbjct: 430 G-SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------SSKGS---DGHTLAFTTEGEV 479
Query: 352 YAFGAGDKGQLG 363
+++G GD G+LG
Sbjct: 480 FSWGDGDYGKLG 491
Score = 42 (19.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 109 GNFFTAVLSREGRVYTFSW-GNDARL 133
G+F T VL E R +F G + +L
Sbjct: 2135 GDFITCVLDMEARTISFGKNGEEPKL 2160
Score = 40 (19.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 345 LTESGKLYAFGAGDKG 360
L E+G++ G+G KG
Sbjct: 2045 LVENGQILTHGSGGKG 2060
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 58/233 (24%), Positives = 97/233 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 401 TALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVE 458
Query: 119 ------------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXX 165
G+++T+ G+ RLGH + ++P + ++ N +
Sbjct: 459 IIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTV 518
Query: 166 XXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXX 225
Q V+++ +TD K P L+E +L +
Sbjct: 519 GLTTSGQ-----VFTMGSTVYGQLGNL-QTDGKLPCLVED-KLASEFVEEISCGAYHVAA 571
Query: 226 XGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 277
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 572 LTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 138 (53.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
+RTD P+ +E +L++ + G + TWG G LGHG +
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVT--RQGEIFTWGEESGGRLGHGIGKDVF 322
Query: 253 VPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
P++V++L ++ VA G++ T V+ G++Y++G G HN G G+ ++
Sbjct: 323 HPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGT-----HNVGLLGHGSDISHW 377
Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ ++ SL+ ++ V +S W HT +T G+L+ FG G G LG
Sbjct: 378 IPKRIAGSLEGLH--VASVSCGP---W--HTALITSYGRLFTFGDGTFGVLG 422
Score = 137 (53.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 49/174 (28%), Positives = 78/174 (44%)
Query: 196 DEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY--GCLGHGNEECESV 253
D HPRL+E + G + TWG G + G LGHG++ +
Sbjct: 320 DVFHPRLVESLTATSSVDFVACGEFHTCAVT-LAGELYTWGDGTHNVGLLGHGSDISHWI 378
Query: 254 PK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
PK + +L + V+ G + T +++ G +++FG G LGH Q R L
Sbjct: 379 PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL 438
Query: 313 TPQLVTSLK-QV--NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ ++ V VV+I +T S N+ + + SGKL+ +G GDK +LG
Sbjct: 439 SGLRTIAVSCGVWHTAAVVEIIVTQS---NSSSVS---SGKLFTWGDGDKNRLG 486
Score = 127 (49.8 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 44/134 (32%), Positives = 61/134 (45%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G++ TWG G LGHG+++ P V AL D +A G T ++ G V++ G
Sbjct: 472 GKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS 531
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N DG+ P LV K +E V +IS Y H ALT
Sbjct: 532 TVYGQLG-NLQTDGK--------LPCLVED-KLASEFVEEISC--GAY---HVAALTSRN 576
Query: 350 KLYAFGAGDKGQLG 363
++Y +G G G+LG
Sbjct: 577 EVYTWGKGANGRLG 590
Score = 127 (49.8 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
GR+ T+G G +G LGHG++E P+ V++L+ ++ I V+ G + T V E + +
Sbjct: 408 GRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEI--IVTQSN 465
Query: 290 GESASLGHNAI-ADGQGNR--HANV---LTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
S S G DG NR H + L P V +L N +I+ +S+ T
Sbjct: 466 SSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFH--KIACGHSL-----TV 518
Query: 344 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
LT SG+++ G+ GQLG N QT+ P V+ L+
Sbjct: 519 GLTTSGQVFTMGSTVYGQLG----NLQTDGKLPCLVEDKLA 555
Score = 114 (45.2 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-AAIGNFFTAVLSREG 120
++ G+++ +G++S G +G+ G K V P+LVESL V A G F T ++ G
Sbjct: 296 VTRQGEIFTWGEESGGRLGHGI-G-KDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAG 353
Query: 121 RVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+YT+ G N LGH ++ + P + G+LE + V +
Sbjct: 354 ELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASV 394
Score = 80 (33.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 116
T ++ AG++Y +G + G G+ + ++ SL+ + V + G + TA++
Sbjct: 346 TCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALI 404
Query: 117 SREGRVYTFSWGNDARLGH 135
+ GR++TF G LGH
Sbjct: 405 TSYGRLFTFGDGTFGVLGH 423
Score = 70 (29.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G+V T G YG LG+ + + +P +V+ L ++ G Y ++ +VY++G
Sbjct: 524 GQVFTMGSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWG 582
Query: 289 CGESASLGHNAIAD 302
G + LGH + D
Sbjct: 583 KGANGRLGHGDLED 596
Score = 67 (28.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 63 SDA-GQVYAFGK---DSFGEAEYGVQGTKLVTS-----PQLVESLKNIFVVQAAIGNFFT 113
SDA G VY +G+ D+ + + L T P+ +ES + V Q A G
Sbjct: 234 SDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHA 293
Query: 114 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 148
A ++R+G ++T WG ++ RLGH DV HP L
Sbjct: 294 AFVTRQGEIFT--WGEESGGRLGHGIG-KDVF-HPRL 326
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 148 (57.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG E E P++++AL ++ VA G + + +SE GD+Y +G
Sbjct: 178 GQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGW 237
Query: 290 GESASL 295
ES L
Sbjct: 238 NESGQL 243
Score = 103 (41.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ AGQV+++G G+ +G + P+L+E+L+ + + + A G + + LS
Sbjct: 172 LLLDAAGQVFSWGAGRHGQLGHGTLEAE--PEPRLLEALQGLRMAEVAAGGWHSVCLSET 229
Query: 120 GRVYTFSWGNDARLGHHTE 138
G +Y + W +L T+
Sbjct: 230 GDIYIWGWNESGQLALPTK 248
Score = 83 (34.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFV 277
G + TWGWG+YG LGH + P V+ D K + V T G + T+V
Sbjct: 320 GELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVD-KQLQVRTVSCGPWNTYV 369
Score = 67 (28.6 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
HT LT +G+LY +G G GQLG
Sbjct: 312 HTAVLTRTGELYTWGWGKYGQLG 334
Score = 66 (28.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
+A+ V+ G T V++ G++Y++G G+ LGH
Sbjct: 302 EAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGH 335
Score = 44 (20.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGRV 122
G + FG FG+A G + V SP+ + + ++ V + + +TA ++R GRV
Sbjct: 7 GTWFGFGFCGFGQALGSGLGRQ-VHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV 63
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 151 (58.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG E E P++++AL + VA G + + VSE GD+Y +G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 290 GESASLG---HNAIADGQ 304
ES L N DG+
Sbjct: 237 NESGQLALPTRNLAEDGE 254
Score = 105 (42.0 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + +S
Sbjct: 171 LLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 120 GRVYTFSWGNDARL 133
G +Y + W +L
Sbjct: 229 GDIYIWGWNESGQL 242
Score = 87 (35.7 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVS-EDG 282
G + TWGWG+YG LGH + P+ V+ D VKA V G + T+V + E G
Sbjct: 317 GELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKA--VTCGPWNTYVYAVEKG 372
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
HT +T +G+LY +G G GQLG E + T P RV+
Sbjct: 309 HTAVVTRTGELYTWGWGKYGQLGHE---DTTSLDRPRRVE 345
Score = 64 (27.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 300 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 332
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 151 (58.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+V +WG GR+G LGHG E E P++++AL + VA G + + VSE GD+Y +G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 290 GESASLG---HNAIADGQ 304
ES L N DG+
Sbjct: 237 NESGQLALPTRNLAEDGE 254
Score = 105 (42.0 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + +S
Sbjct: 171 LLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 120 GRVYTFSWGNDARL 133
G +Y + W +L
Sbjct: 229 GDIYIWGWNESGQL 242
Score = 87 (35.7 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVS-EDG 282
G + TWGWG+YG LGH + P+ V+ D VKA V G + T+V + E G
Sbjct: 319 GELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKA--VTCGPWNTYVYAVEKG 374
Score = 73 (30.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
HT +T +G+LY +G G GQLG E + T P RV+
Sbjct: 311 HTAVVTRTGELYTWGWGKYGQLGHE---DTTSLDRPRRVE 347
Score = 64 (27.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 302 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 51/142 (35%), Positives = 77/142 (54%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V +WG G LG G+ + P ++AL+D K +A G T ++++ G V++FG
Sbjct: 220 GNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGD 279
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTES 348
G+ LGHN+ N L P+LVT L V RV QI+ HT A ++++
Sbjct: 280 GKYGQLGHNSTQ--------NELRPRLVTGL--VGNRVTQIACGRQ-----HTLAYVSDT 324
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
GK+++FG+G +GQLG NQ
Sbjct: 325 GKVFSFGSGKEGQLGNGGTRNQ 346
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/240 (25%), Positives = 99/240 (41%)
Query: 64 DAGQVYAFGKDSFG---EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
D G+ + S G E +Y ++ + Q + KNI +Q G++ + LS+ G
Sbjct: 114 DQGEEHMLVLSSDGKPFEYKYSIEHARF----QCILQEKNI--IQITCGDYHSLALSKGG 167
Query: 121 RVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+ F+WG D +LG ++ L +P+VQI SG V
Sbjct: 168 EL--FAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSM--SGN-V 222
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
YS +++ P IE ++ + G V T+G G
Sbjct: 223 YSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVE--FLACGGCHTALLTKSGLVFTFGDG 280
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGH 297
+YG LGH + + E P++V L + +A G +T VS+ G V+SFG G+ LG+
Sbjct: 281 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGN 340
Score = 135 (52.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP +L +M +S +G VY++G++ G+ G K SP +E
Sbjct: 191 TPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK--ESPSCIE 248
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
+L + V A G TA+L++ G V+TF G +LGH++ N++ P + G + N V
Sbjct: 249 ALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RV 307
Query: 157 VQI 159
QI
Sbjct: 308 TQI 310
Score = 129 (50.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G + WG G LG G S P++V+ L+ V + ++ G+ + +S G+VYS+G
Sbjct: 167 GELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWG 226
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
+ LG G+ + N +P + +L +++ V+ HT LT+S
Sbjct: 227 RNDCGQLG-------LGHTY-NKESPSCIEAL---DDQKVEFLACGG----CHTALLTKS 271
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G ++ FG G GQLG N+
Sbjct: 272 GLVFTFGDGKYGQLGHNSTQNE 293
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
L + I + GDY + +S+ G+++++G LG G A+ TP++V +
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG-------VGRIFASTSTPEIVEN 197
Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
L V +VQIS AH+ AL+ SG +Y++G D GQLG+ N+ E +
Sbjct: 198 LSGVP--LVQISAGE-----AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEAL 250
Query: 380 D 380
D
Sbjct: 251 D 251
Score = 38 (18.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 259 ALNDVKAIHVATGDYTTFVVSEDGD 283
+L D+K + G+ ++ +DGD
Sbjct: 737 SLEDLKELSPVLGESLQTLLDDDGD 761
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 168 (64.2 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 48/148 (32%), Positives = 71/148 (47%)
Query: 230 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GRV WG G LG G +E +PK ++ L +K I VA G Y + +SEDG V+S+G
Sbjct: 94 GRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G + +PQ V SL+ + + Q++ H+FAL+ S
Sbjct: 154 TNSHGQLG-------LGKEFPSQASPQRVRSLEGIP--LAQVAAGGH-----HSFALSLS 199
Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNP 376
G + +G+ GQL + N +R P
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKP 227
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 58/236 (24%), Positives = 100/236 (42%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 117
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 118 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPS 174
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 175 GMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCT 234
S + P I + L + QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT--QDGKVFT 259
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 152 (58.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 51/154 (33%), Positives = 76/154 (49%)
Query: 228 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG+V +WG +G LG G E ++ P+ V++L + VA G + +F +S G S
Sbjct: 145 EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT--S 202
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G S S G A++ N P + +LK + VV IS Y HT LT
Sbjct: 203 FGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCG---Y--KHTAVLT 252
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
+ GK++ FG GQLG + E+ P+ V+
Sbjct: 253 QDGKVFTFGDNSYGQLGHDPT---AEKRGPQLVE 283
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 58/233 (24%), Positives = 99/233 (42%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ +S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGHHSFALSL 198
Query: 119 EGRVYTFSWGNDA--RLGHHTEPNDVEPH-PL-LGTLENIPVVQIXXXXXXXXXXXXQPS 174
G +F WG+++ +L V+ + P+ +G L+ + VV I
Sbjct: 199 SGT--SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGK 256
Query: 175 GMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCT 234
V++ +++ P+L+E+ + L Q G+V +
Sbjct: 257 ---VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYT--TGQVVS 311
Query: 235 WGWGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVV-SED 281
+G G GC H E + +V A L DV+ H+ G Y FV S+D
Sbjct: 312 FGRGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQD 363
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 234 TWGWGRYGC----LGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
++GWG L N + P + AL + + ++ G T V+++DG V++FG
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFG 261
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTE 347
LGH+ A+ +G PQLV +++ V QI + HT A +
Sbjct: 262 DNSYGQLGHDPTAEKRG--------PQLV---ERIEGLVSQIDCGSD-----HTLAYIYT 305
Query: 348 SGKLYAFGAG 357
+G++ +FG G
Sbjct: 306 TGQVVSFGRG 315
Score = 80 (33.2 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+SD G V + G +S G+ G +GT P+ + +L+ + V + G + + +
Sbjct: 37 LLLSD-GTVQSCGDNSRGQL--GRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHK 93
Query: 120 GRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
GRV F+WG ++ +LG + TL I ++Q+
Sbjct: 94 GRV--FAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQV 133
Score = 53 (23.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVV 157
++QAA G + +L +G V + + +LG P +P P L TL N+ +V
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-NVALV 80
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 145 (56.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 48/138 (34%), Positives = 69/138 (50%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DGR+ WG G +G N VP+ V V I + G Y + V+ DG++Y F
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVTTDGELYVF 214
Query: 288 GCGESASLG-HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
G E+ LG N + GN TPQLV+ ++ E+V+Q++ HT LT
Sbjct: 215 GEPENGKLGLPNQLL---GNHR----TPQLVS---EIPEKVIQVACGGE-----HTVVLT 259
Query: 347 ESGKLYAFGAGDKGQLGI 364
E+ +Y FG G GQLG+
Sbjct: 260 ENA-VYTFGLGQFGQLGL 276
Score = 124 (48.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+ ++ +G +G LG G++ S P V+AL K A G T V +E G+VY+ G
Sbjct: 53 NNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATG 112
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG + D + +V++ TS ++ Q+S ++ + ALTE
Sbjct: 113 GNNEGQLG---LGDTEERNTFHVIS--FFTS----EHKIKQLSAGSNT-----SAALTED 158
Query: 349 GKLYAFGAGDKGQLGIELVNN 369
G+L+ +G +GQ+G++ V+N
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSN 179
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG + +G G LG N+ + P++V + + K I VA G T V++E+ VY+
Sbjct: 208 DGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYT 265
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G+ LG G P+++ +++ ++ + IS + HT +T
Sbjct: 266 FGLGQFGQLG-------LGTFLFETSEPKVIENIR--DQTISYISCGEN-----HTALIT 311
Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
+ G +Y FG G G+LG+ L N
Sbjct: 312 DIGLMYTFGDGRHGKLGLGLEN 333
Score = 86 (35.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+++ ++Y FG +++G+ G+ ++ P V++LK V AA G T V + G
Sbjct: 49 VVTGNNKLYMFGSNNWGQL--GLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGG 106
Query: 121 RVYTFSWGNDARLG 134
VY N+ +LG
Sbjct: 107 NVYATGGNNEGQLG 120
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+++ G+++ +G +S E + G++ V PQ V K + + G + +A ++ +G
Sbjct: 155 LTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVTIGKPVSWISC--GYYHSAFVTTDGE 210
Query: 122 VYTFSWGNDARLG 134
+Y F + +LG
Sbjct: 211 LYVFGEPENGKLG 223
Score = 64 (27.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/74 (24%), Positives = 41/74 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLS 117
T++ ++ G VYA G ++ E + G+ T+ + ++ + + Q + G+ +A L+
Sbjct: 99 TLVSTEGGNVYATGGNN--EGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 118 REGRVYTFSWGNDA 131
+GR+ F WG+++
Sbjct: 157 EDGRL--FMWGDNS 168
Score = 61 (26.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D+G V+ FGK F E G K KN V + G+ +AV++
Sbjct: 7 LMPDSGAVFTFGKSKFAENNPG----KFW--------FKNDVPVHLSCGDEHSAVVTGNN 54
Query: 121 RVYTFSWGNDARLG 134
++Y F N +LG
Sbjct: 55 KLYMFGSNNWGQLG 68
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 66/270 (24%), Positives = 111/270 (41%)
Query: 30 LGREVNGT-PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
LG + G+ P +L ++ +++ GQV+A+G G+ G +
Sbjct: 66 LGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEA 124
Query: 89 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPL 147
V P+L++ L + Q GN LS++G+++ + + +LG EP+ + P PL
Sbjct: 125 VRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPL 184
Query: 148 LGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQ 207
+L IP+ QI SG AV+ D P I+ F
Sbjct: 185 K-SLCGIPLTQISAGGDHSFALSF--SG-AVFGWGKNSAGQLGLNDEQDRAVPCHIK-F- 238
Query: 208 LLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
L + + ++G + T+G G G LGH + E +P+ V L +
Sbjct: 239 LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQ 298
Query: 268 VATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G ++T V G +Y+FGC LG
Sbjct: 299 IACGRNHTLAFVPSTGLIYAFGCNTQGQLG 328
Score = 142 (55.0 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG +E+ +VP ++ L K ++++ G+ T ++++G +++FG
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGN 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES- 348
G LGH++ N P+ V L + V QI+ + HT A S
Sbjct: 269 GSKGQLGHDSTR--------NEPLPRRVMEL--MGTEVSQIACGRN-----HTLAFVPST 313
Query: 349 GKLYAFGAGDKGQLG 363
G +YAFG +GQLG
Sbjct: 314 GLIYAFGCNTQGQLG 328
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/136 (31%), Positives = 66/136 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V T G G LGH ++ S P++V AL+ K V+ G + V+E G V+++G
Sbjct: 52 DGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWG 109
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G+ LG G V P+L+ L + R+ Q+ N H AL++
Sbjct: 110 AGDGGQLG-------LGTAEEAVRVPRLIKKLCE--HRISQVMCGNH-----HCIALSKD 155
Query: 349 GKLYAFGAGDKGQLGI 364
G+L+ +G GQLG+
Sbjct: 156 GQLFVWGENSSGQLGL 171
Score = 140 (54.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 44/144 (30%), Positives = 70/144 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG++ WG G LG G E ++ P+ +++L + ++ G +F +S G V+
Sbjct: 154 KDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFG 213
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G + LG N D Q P + L+ +++VV IS HT ALT
Sbjct: 214 WGKNSAGQLGLN---DEQDRA-----VPCHIKFLR--SQKVVYISCGEE-----HTAALT 258
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
+ G L+ FG G KGQLG + N+
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNE 282
Score = 69 (29.3 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G VY G +S G+ + G++ P+LV +L + + G + ++ +G
Sbjct: 49 LLHD-GSVYTCGSNSCGQLGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQG 103
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
+V+ + G+ +LG T V L+ L
Sbjct: 104 QVFAWGAGDGGQLGLGTAEEAVRVPRLIKKL 134
Score = 51 (23.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ A GN + L +G VYT + +LGH + P L+G L+
Sbjct: 38 EVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPE-LVGALD 82
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 156 (60.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 230 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G+V WG G G LG G +E +P ++AL +K I V+ G Y + +SEDG V+S+G
Sbjct: 93 GKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G+ +R + PQ V SL+ + + Q++ + H+FAL+ +
Sbjct: 153 RNSEGQLGL-----GKNSRSQAI--PQKVKSLEGIP--LAQVAAGGT-----HSFALSLT 198
Query: 349 GKLYAFGAGDKGQLGI 364
G + +G+ GQL +
Sbjct: 199 GTSFGWGSNRSGQLAL 214
Score = 151 (58.2 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 228 QDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V +WG G LG G N +++P+ V++L + VA G +F +S G S
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT--S 201
Query: 287 FGCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
FG G + S G A++ GN+ + P + +LK ++ V+ IS Y HT L
Sbjct: 202 FGWGSNRS-GQLALS---GNKVKEQIYKPHSIGALKNLS--VIYISCG---Y--EHTAVL 250
Query: 346 TESGKLYAFGAGDKGQL 362
TE G+++ FG GQL
Sbjct: 251 TEEGQVFTFGGNSSGQL 267
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
RV + G +G LG ++ P+ +QALND+ V+ G + V G V+++G G
Sbjct: 42 RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAG 101
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
LG + P + +L + +++Q+S + Y H+ AL+E G
Sbjct: 102 SEGQLGIGEFKEIS-------FMPTKIKALAGI--KIIQVSCGH--Y---HSLALSEDGH 147
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERV 379
++++G +GQLG L N + P++V
Sbjct: 148 VFSWGRNSEGQLG--LGKNSRSQAIPQKV 174
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/105 (26%), Positives = 57/105 (54%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ + LS
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 119 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G V FSWG ++ LG ++ + P + +LE IP+ Q+
Sbjct: 145 DGHV--FSWGRNSEGQLGLGKNSRSQAI-PQKVK-SLEGIPLAQV 185
Score = 95 (38.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 235 WGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
WG R G L GN+ E + P + AL ++ I+++ G T V++E+G V++FG
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNS 263
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGK 350
S L + + +G PQL+ + RV QI + Y HT A +G+
Sbjct: 264 SGQLQPSPRSGQRG--------PQLIEG---IGGRVSQIECAS--Y---HTIAYVYTTGQ 307
Query: 351 LYAFGAG 357
+ + G G
Sbjct: 308 VVSLGRG 314
Score = 77 (32.2 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 21/102 (20%), Positives = 53/102 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++L+ +VY+ G +S+G+ G + + P+ +++L ++ V + G + +
Sbjct: 34 SLLLFSNHRVYSCGDNSWGQL--GQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCH 91
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
+G+V+ + G++ +LG E ++ P + L I ++Q+
Sbjct: 92 KGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQV 132
Score = 54 (24.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPL 147
+L I ++QAA G + +L RVY+ SWG +LG + + P P+
Sbjct: 14 RLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWG---QLGQRRDQSTERPEPI 68
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/135 (34%), Positives = 74/135 (54%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + +WG G LG G+ E + P +++ L++ K VA G + ++++DG +++FG
Sbjct: 210 GNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGA 269
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTES 348
G+ LGHN+ N L P LV L V RV QI+ W HT A +++
Sbjct: 270 GKHGQLGHNSTQ--------NELRPCLVAEL--VGYRVTQIACGR---W--HTLAYVSDL 314
Query: 349 GKLYAFGAGDKGQLG 363
GK+++FG+G GQLG
Sbjct: 315 GKVFSFGSGKDGQLG 329
Score = 155 (59.6 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 61/244 (25%), Positives = 100/244 (40%)
Query: 64 DAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
D G + S G+ EY K + +++ K ++Q G++ + LS+ G +
Sbjct: 103 DQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKK---IIQITCGDYHSLALSKGGEL 159
Query: 123 YTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 179
F+WG + +LG + P+ P ++ L +P+ QI SG +Y
Sbjct: 160 --FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAGVPLAQISAGEAHSMALSM--SGN-IY 213
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S + P LIE N + QDG + T+G G+
Sbjct: 214 SWGKNECGQLGLGHTESKDDPSLIEGLD--NQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGHN 298
+G LGH + + E P +V L + +A G + T VS+ G V+SFG G+ LG+
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 299 AIAD 302
D
Sbjct: 332 GTRD 335
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP L +M +S +G +Y++GK+ G+ G+ T+ P L+E
Sbjct: 181 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQL--GLGHTESKDDPSLIE 238
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
L N V A G +A+L+++G ++TF G +LGH++ N++ P L+ L V
Sbjct: 239 GLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPC-LVAELVGYRV 297
Query: 157 VQI 159
QI
Sbjct: 298 TQI 300
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G + WG +G LG G + + P++V+ L V ++ G+ + +S G++YS+G
Sbjct: 157 GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWG 216
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
E LG G+ + P L+ L N++V ++ S H+ LT+
Sbjct: 217 KNECGQLG-------LGHTESKD-DPSLIEGLD--NQKVEFVACGGS-----HSALLTQD 261
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G L+ FGAG GQLG N+
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNE 283
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 53/206 (25%), Positives = 93/206 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNFFTAVL 116
++ +S G+++A+G++ G+ GV G K T+PQ+VE L + + Q + G + L
Sbjct: 150 SLALSKGGELFAWGQNLHGQL--GV-GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206
Query: 117 SREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQP 173
S G +Y SWG + +LG HTE D +P + G L+N V+ Q
Sbjct: 207 SMSGNIY--SWGKNECGQLGLGHTESKD-DPSLIEG-LDN-QKVEFVACGGSHSALLTQ- 260
Query: 174 SGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRV 232
G+ +++ S +E P L+ + L+ + D G+V
Sbjct: 261 DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE--LVGYRVTQIACGRWHTLAYVSDLGKV 317
Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQ 258
++G G+ G LG+G + +P V+
Sbjct: 318 FSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
L + K I + GDY + +S+ G+++++G +L H + G G + + TPQ+V
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWG----QNL-HGQL--GVGRKFPSTTTPQIVEH 187
Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
L V + QIS AH+ AL+ SG +Y++G + GQLG+
Sbjct: 188 LAGVP--LAQISAGE-----AHSMALSMSGNIYSWGKNECGQLGL 225
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 51/142 (35%), Positives = 71/142 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG + WG+ G +G G+ + P KV L+ K +++A G ++ V + G+VY +
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L V V QI + AHT ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPVRVAALHGVC--VNQI-----VCGYAHTLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNN 369
G LYA+GA GQLG NN
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNN 272
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ + VPK ++AL +K++ +G + + +EDG VY++G
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHV-LLSTEDGVVYAWG- 100
Query: 290 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
HN + G G + + Q+ T+L + ++VV+++ + H+ AL
Sbjct: 101 -------HNGYSQLGNGTTNQGIAPIQVCTNL--LVKQVVEVACGSH-----HSMALAAD 146
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G+L+A+G + GQ+G NQ
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ 168
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V WG Y LG+G P +V L + + VA G + + ++ DG++++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFA 151
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G +G + A N TP+ VT+ ++VV I+ + + A+
Sbjct: 152 WGYNNCGQVGSGSTA--------NQPTPRKVTNCLHT-KKVVNIACGQT-----SSMAVL 197
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
+SG++Y +G GQLG+ NQ
Sbjct: 198 DSGEVYGWGYNGNGQLGLGNNGNQ 221
Score = 119 (46.9 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG+ G LG GN + P V AL+ V + G T ++++G +Y++G
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG G+++ N+L+P T + ERV++I+ +S + +A A T+ G
Sbjct: 260 NTYGQLG-------TGSKN-NLLSP---TQIMVEKERVIEIAACHSTHTSA---AKTQGG 305
Query: 350 KLYAFG 355
+Y +G
Sbjct: 306 HVYMWG 311
Score = 86 (35.3 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSR 118
+L ++ G VYA+G + + + G T +P Q+ +L VV+ A G+ + L+
Sbjct: 88 LLSTEDGVVYAWGHNGYSQLGNGT--TNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAA 145
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+G ++ + + N ++G + N P + L VV I
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNI 186
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V D+ + G T +S+ G VYS
Sbjct: 33 EPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDI--VQAEAGGMHTVCLSKSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V + E+V+Q+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVDLQEKVIQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGI 364
E G+++ +G+ + G +G+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGL 155
Score = 132 (51.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 45/144 (31%), Positives = 68/144 (47%)
Query: 228 QDGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+DGRV WG R G +G +S VP VQ V + VA+G+ +++ DGD+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SVPVVKVASGNDHLVMLTVDGDL 193
Query: 285 YSFGCGESASLGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
Y+ G GE LG + +G R +L P+ V LK R + ++
Sbjct: 194 YTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKSRGSRG-HVRFQDAFCGAYF 251
Query: 342 TFALTESGKLYAFGAGDKGQLGIE 365
TFA++ G +Y FG + QLG +
Sbjct: 252 TFAISSEGHVYGFGLSNYHQLGTQ 275
Score = 104 (41.7 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 46/152 (30%), Positives = 60/152 (39%)
Query: 229 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 272
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
Y TF +S +G VY FG LG QG V PQ +TS K N +
Sbjct: 250 YFTFAISSEGHVYGFGLSNYHQLGT------QGTESCFV--PQNLTSFK--NSTKSWVGF 299
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ + HT + GK Y+ G + G+LG+
Sbjct: 300 SGGQH---HTVCMDSEGKAYSLGRAEYGRLGL 328
Score = 101 (40.6 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P V+ + V+Q + G+ TA L
Sbjct: 79 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVDLQEK--VIQVSAGDSHTAAL 134
Query: 117 SREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +GRV F WG N+ +G EP P+ L ++PVV++
Sbjct: 135 TEDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-SVPVVKV 177
Score = 101 (40.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 229 DGRVCTWGWGRYGCLG-HGNEECESVPKVVQAL-NDVKA-IHVATGDYTTFVVSEDGDVY 285
+G V +G Y LG G E C VP+ + + N K+ + + G + T + +G Y
Sbjct: 258 EGHVYGFGLSNYHQLGTQGTESC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAY 316
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
S G E LG + +G + L P+L T V ++ S+ +A+
Sbjct: 317 SLGRAEYGRLG---LGEGAEEKSVPTLIPRLPT--------VSSVACGASV-----GYAV 360
Query: 346 TESGKLYAFGAGDKGQLG 363
T+ G+++A+G G QLG
Sbjct: 361 TKDGRVFAWGMGTNYQLG 378
Score = 92 (37.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+GR G LG G EE +SVP ++ L V + VA G + V++DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSVPTLIPRLPTVSS--VACGASVGYAVTKDGRVFAWGMGTNYQLG 378
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
GQ + +P +T KQ+ RVV
Sbjct: 379 -----TGQDE---DAWSPVEMTG-KQLENRVV 401
Score = 89 (36.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 26/78 (33%), Positives = 35/78 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVL 116
T IS G VY FG ++ + G QGT+ PQ + S KN V + G T +
Sbjct: 252 TFAISSEGHVYGFGLSNYHQL--GTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
Query: 117 SREGRVYTFSWGNDARLG 134
EG+ Y+ RLG
Sbjct: 310 DSEGKAYSLGRAEYGRLG 327
Score = 85 (35.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 28/97 (28%), Positives = 43/97 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++I VQA G T LS+ G+V
Sbjct: 32 TEPGVVLTLGQGDVGQLGLG-ENVMERKKPALVSIPEDI--VQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
Y+F ++ LG T E P L+ V+Q+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVDLQE-KVIQV 124
Score = 65 (27.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVML 187
Query: 117 SREGRVYTFSWGNDARLGHHTE 138
+ +G +YT G +LG E
Sbjct: 188 TVDGDLYTLGSGEQGQLGRVPE 209
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYS 286
+ G V +G + G LG GN+ ++VP Q + + + I +A G + ++ G++YS
Sbjct: 219 ETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYS 277
Query: 287 FGCGESASLGHNA----IADGQGNRHANVLTPQLVTSL--KQVNERVVQIS--LTNSIYW 338
FGC E LGHN+ IA Q + L P+ V K + +++ + + +
Sbjct: 278 FGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVAC 337
Query: 339 NA-HTFALTESGKLYAFGAGDKGQLG 363
A HT L +++++G G G+LG
Sbjct: 338 GANHTLVLDSQKRVFSWGFGGYGRLG 363
Score = 122 (48.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 16 RPDIINERNGKRNLLGREVNGTPLY-CRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKD 74
R ++ ++ RNL G+ + G Y C + ++LI+ G+++++G++
Sbjct: 119 RKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRN 177
Query: 75 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
G+ +G TK V +P+L+E L + +V AA G T L+ G V+ F +LG
Sbjct: 178 EKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 235
Query: 135 HHTEPNDVEPHP 146
+ D P P
Sbjct: 236 LGNQ-TDAVPSP 246
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G++ +WG G LGHG+ + P++++ L+ + A G T ++E G V++FG
Sbjct: 168 EGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFG 227
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
+ LG GN+ V +P + Q +T + +
Sbjct: 228 ENKMGQLG-------LGNQTDAVPSPAQIMYNGQ--------PITKMACGAEFSMIMDCK 272
Query: 349 GKLYAFGAGDKGQLG 363
G LY+FG + GQLG
Sbjct: 273 GNLYSFGCPEYGQLG 287
Score = 98 (39.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
RV +WG+G YG LGH ++ E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 350 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 98 (39.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLS 117
T+ +++ G V+AFG++ G+ G Q T V SP Q++ + + I + A G F+ ++
Sbjct: 214 TLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNGQPI--TKMACGAEFSMIMD 270
Query: 118 REGRVYTFSWGNDARLGHHTE 138
+G +Y+F +LGH+++
Sbjct: 271 CKGNLYSFGCPEYGQLGHNSD 291
Score = 48 (22.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGH 297
VA G T V+ V+S+G G LGH
Sbjct: 335 VACGANHTLVLDSQKRVFSWGFGGYGRLGH 364
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFG 288
G V +G + G LG GN+ ++VP Q + + + I +A G + ++ G++YSFG
Sbjct: 219 GSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFG 277
Query: 289 CGESASLGHNA----IADGQGNRHANVLTPQLVTSL--KQVNERVVQIS--LTNSIYWNA 340
C E LGHN+ IA Q + L P+ V K + +++ + + + A
Sbjct: 278 CPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGA 337
Query: 341 -HTFALTESGKLYAFGAGDKGQLG 363
HT L +++++G G G+LG
Sbjct: 338 NHTLVLDSQKRVFSWGFGGYGRLG 361
Score = 121 (47.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 16 RPDIINERNGKRNLLGREVNGTPLY-CRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKD 74
R ++ ++ RNL G+ + G Y C S ++LI+ G+++++G++
Sbjct: 117 RKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRN 175
Query: 75 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
G+ +G TK V +P+L+E+L + +V AA G T L+ G V+ F +LG
Sbjct: 176 EKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 233
Query: 135 HHTEPNDVEPHP 146
+ D P P
Sbjct: 234 LGNQ-TDAVPSP 244
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 35/135 (25%), Positives = 61/135 (45%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G++ +WG G LGHG+ + P++++AL+ + A G T +++ G V++FG
Sbjct: 166 EGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFG 225
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
+ LG GN+ V +P + Q +T + +
Sbjct: 226 ENKMGQLG-------LGNQTDAVPSPAQIMYNGQ--------PITKMACGAEFSMLMDCK 270
Query: 349 GKLYAFGAGDKGQLG 363
G LY+FG + GQLG
Sbjct: 271 GNLYSFGCPEYGQLG 285
Score = 100 (40.3 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D G V+AFG++ G+ G Q T V SP Q++ + + I + A G F+ ++
Sbjct: 212 TLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNGQPI--TKMACGAEFSMLMD 268
Query: 118 REGRVYTFSWGNDARLGHHTE 138
+G +Y+F +LGH+++
Sbjct: 269 CKGNLYSFGCPEYGQLGHNSD 289
Score = 99 (39.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
RV +WG+G YG LGH ++ E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 50 (22.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 25/89 (28%), Positives = 36/89 (40%)
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 333 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--------MVPRLVKLFDFPGRGA 384
Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGA 356
QI + +FA++E G L+ +GA
Sbjct: 385 TQIYAGYTC-----SFAVSEVGGLFFWGA 408
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 173 (66.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 51/142 (35%), Positives = 71/142 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG+ G +G G+ + P KV L+ + + +A G ++ V ++G+VY +
Sbjct: 175 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 234
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L V V QI + AHT ALT+
Sbjct: 235 GYNGNGQLG-------LGN-NGNQLTPVRVAALHSVC--VNQI-----VCGYAHTLALTD 279
Query: 348 SGKLYAFGAGDKGQLGIELVNN 369
G LYA+GA GQLG NN
Sbjct: 280 EGLLYAWGANTYGQLGTGNKNN 301
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 70/300 (23%), Positives = 127/300 (42%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+ ++D +V+ FG + G + LV P+ +E+L + + G+ +LS E
Sbjct: 64 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEALCGKKIKSLSYGSGPHVLLSTE 121
Query: 120 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
V ++WG++ ++LG+ T + P + N+ + Q+ +
Sbjct: 122 DGV-VYAWGHNGYSQLGNGTTNQGIAP---IQVCTNLLIKQVVEVACGSHHSMALAADGE 177
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWG 236
V++ S ++ PR + L+++ D G V WG
Sbjct: 178 VFAWGYNNCGQVGSGSTANQPTPRKVTN--CLHIKRVVSIACGQTSSMAVLDNGEVYGWG 235
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+ G LG GN + P V AL+ V + G T ++++G +Y++G LG
Sbjct: 236 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 295
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFG 355
GN++ N+L+P + K ERVV+I+ +S AHT A T+ G +Y +G
Sbjct: 296 -------TGNKN-NLLSPAHIMVEK---ERVVEIAACHS----AHTSAAKTQGGHVYMWG 340
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V WG Y LG+G P +V L + + VA G + + ++ DG+V++
Sbjct: 121 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 180
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G +G + A N TP+ VT+ + +RVV I+ + + A+
Sbjct: 181 WGYNNCGQVGSGSTA--------NQPTPRKVTNCLHI-KRVVSIACGQT-----SSMAVL 226
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
++G++Y +G GQLG+ NQ
Sbjct: 227 DNGEVYGWGYNGNGQLGLGNNGNQ 250
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ + VPK ++AL +K++ +G + + +EDG VY++G
Sbjct: 72 VFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHV-LLSTEDGVVYAWG- 129
Query: 290 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
HN + G G + + Q+ T+L + ++VV+++ + H+ AL
Sbjct: 130 -------HNGYSQLGNGTTNQGIAPIQVCTNL--LIKQVVEVACGSH-----HSMALAAD 175
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G+++A+G + GQ+G NQ
Sbjct: 176 GEVFAWGYNNCGQVGSGSTANQ 197
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 172 (65.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 51/142 (35%), Positives = 71/142 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG+ G +G G+ + P KV L+ + + +A G ++ V ++G+VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L V V QI + AHT ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPVRVAALHSVC--VNQI-----VCGYAHTLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNN 369
G LYA+GA GQLG NN
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNN 272
Score = 154 (59.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 71/300 (23%), Positives = 128/300 (42%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+ ++D +V+ FG + G + LV P+ +E+L + + G+ +LS E
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEALCGKKIKSLSYGSGPHVLLSTE 92
Query: 120 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
V ++WG++ ++LG+ T + P + N+ + Q+ +
Sbjct: 93 DGV-VYAWGHNGYSQLGNGTTNQGIAP---IQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWG 236
V++ S T++ PR + L+++ D G V WG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTN--CLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+ G LG GN + P V AL+ V + G T ++++G +Y++G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFG 355
GN++ N+L+P + K ERVV+I+ +S AHT A T+ G +Y +G
Sbjct: 267 -------TGNKN-NLLSPAHIMVEK---ERVVEIAACHS----AHTSAAKTQGGHVYMWG 311
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ + VPK ++AL +K++ +G + + +EDG VY++G
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHV-LLSTEDGVVYAWG- 100
Query: 290 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
HN + G G + + Q+ T+L + ++VV+++ + H+ AL
Sbjct: 101 -------HNGYSQLGNGTTNQGIAPIQVCTNL--LIKQVVEVACGSH-----HSMALAAD 146
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G+++A+G + GQ+G NQ
Sbjct: 147 GEVFAWGYNNCGQVGSGSTTNQ 168
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V WG Y LG+G P +V L + + VA G + + ++ DG+V++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G +G + N TP+ VT+ + +RVV I+ + + A+
Sbjct: 152 WGYNNCGQVGSGSTT--------NQPTPRKVTNCLHI-KRVVGIACGQT-----SSMAVL 197
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
++G++Y +G GQLG+ NQ
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQ 221
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 172 (65.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 51/142 (35%), Positives = 71/142 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG+ G +G G+ + P KV L+ + + +A G ++ V ++G+VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L V V QI + AHT ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPVRVAALHSVC--VNQI-----VCGYAHTLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNN 369
G LYA+GA GQLG NN
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNN 272
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 69/300 (23%), Positives = 128/300 (42%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+ ++D+ +V+ FG + G + LV P+ +E+L + + G+ +LS E
Sbjct: 35 LYVTDSDEVFVFGLNYSSCLGTGDNHSTLV--PKKLEALCGKKIKSLSYGSGPHVLLSTE 92
Query: 120 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
V ++WG++ ++LG+ T + P + N+ + Q+ +
Sbjct: 93 DGV-VYAWGHNGYSQLGNGTTNQGLAP---IQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWG 236
V++ S ++ PR + L+++ D G V WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTN--CLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+ G LG GN + P V AL+ V + G T ++++G +Y++G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFG 355
GN++ N+L+P + K ERV++I+ +S AHT A T+ G +Y +G
Sbjct: 267 -------TGNKN-NLLSPAHIMVEK---ERVIEIAACHS----AHTSAAKTQGGHVYMWG 311
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V WG Y LG+G P +V L + + VA G + + ++ DG+V++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G +G + A N TP+ VT+ + +RVV I+ + + A+
Sbjct: 152 WGYNNCGQVGSGSTA--------NQPTPRKVTNCLHI-KRVVGIACGQT-----SSMAVL 197
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
++G++Y +G GQLG+ NQ
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQ 221
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 39/142 (27%), Positives = 71/142 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ VPK ++AL +K++ +G + + +EDG VY++G
Sbjct: 43 VFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHV-LLSTEDGVVYAWG- 100
Query: 290 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
HN + G G + + Q+ T+L + ++VV+++ + H+ AL
Sbjct: 101 -------HNGYSQLGNGTTNQGLAPIQVCTNL--LIKQVVEVACGSH-----HSMALAAD 146
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G+++A+G + GQ+G NQ
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ 168
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 172 (65.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 51/142 (35%), Positives = 71/142 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG+ G +G G+ + P KV L+ + + +A G ++ V ++G+VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L V V QI + AHT ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPVRVAALHSVC--VNQI-----VCGYAHTLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNN 369
G LYA+GA GQLG NN
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNN 272
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 70/300 (23%), Positives = 126/300 (42%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+ ++D +V+ FG + G + LV P+ +E L + + G+ +LS E
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEGLCGKKIKSLSYGSGPHVLLSTE 92
Query: 120 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 177
V ++WG++ ++LG+ T + P + N+ + Q+ +
Sbjct: 93 DGV-VYAWGHNGYSQLGNGTTNQGIAP---VQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 178 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWG 236
V++ S ++ PR + L+++ D G V WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTN--CLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+ G LG GN + P V AL+ V + G T ++++G +Y++G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFG 355
GN++ N+L+P + K ERVV+I+ +S AHT A T+ G +Y +G
Sbjct: 267 -------TGNKN-NLLSPAHIMVEK---ERVVEIAACHS----AHTSAAKTQGGHVYMWG 311
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V WG Y LG+G P +V L + + VA G + + ++ DG+V++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G +G + A N TP+ VT+ + +RVV I+ + + A+
Sbjct: 152 WGYNNCGQVGSGSTA--------NQPTPRKVTNCLHI-KRVVGIACGQT-----SSMAVL 197
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
++G++Y +G GQLG+ NQ
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQ 221
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ + VPK ++ L +K++ +G + + +EDG VY++G
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHV-LLSTEDGVVYAWG- 100
Query: 290 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
HN + G G + + Q+ T+L + ++VV+++ + H+ AL
Sbjct: 101 -------HNGYSQLGNGTTNQGIAPVQVCTNL--LIKQVVEVACGSH-----HSMALAAD 146
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G+++A+G + GQ+G NQ
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ 168
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 162 (62.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 227 GQDGRVCTWGWGRYGCLGHG--NEECESV--PKVVQAL----NDVKAIHVATGDYTTFVV 278
G DG + +WG G +G LGHG + + E++ PK + N+ + + +A G Y + +
Sbjct: 261 GNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFL 320
Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
+ D ++Y+FG GE LGH G+ N N P+ + K + + SI+
Sbjct: 321 TNDNEIYTFGYGEFGQLGH-----GE-NDTLNHYIPKRI---KSTGDNAAGNKI-KSIFA 370
Query: 339 NAH--TFALTESGKLYAFGAGDKGQLG 363
H +F +T G +Y++G D G LG
Sbjct: 371 GDHANSFYITTDGSVYSWGWNDGGSLG 397
Score = 137 (53.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIH----VATGDYT-TFVVSED 281
D + T+G+G +G LGHG + + +PK +++ D A + + GD+ +F ++ D
Sbjct: 323 DNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTD 382
Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN---ERVVQISLTNSIY- 337
G VYS+G + SLGH G H + Q ++++K++ + + S+ N IY
Sbjct: 383 GSVYSWGWNDGGSLGH-----GTNENHYSPKKIQSLSNIKKITSGFKHTLAQSINNDIYV 437
Query: 338 WNAHTFALT 346
+ +TF T
Sbjct: 438 FGDNTFGQT 446
Score = 123 (48.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG V +WGW G LGHG E PK +Q+L+++K I +G T S + D+Y FG
Sbjct: 382 DGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIKKI--TSGFKHTLAQSINNDIYVFG 439
Query: 289 ---CGESA-SLGHNAIADGQGNRHAN 310
G++A +N+ + N + N
Sbjct: 440 DNTFGQTALKFNYNSNNNNDKNNNNN 465
Score = 120 (47.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS--LKQVNE 325
+ +G ++ DG +YS+G G +LGH G ++ N+ TP+ +T+ L
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALGHGV---GSNDKE-NIYTPKKITTFTLNNNES 305
Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
R+V I+ Y H+ LT ++Y FG G+ GQLG
Sbjct: 306 RIVDIACGG--Y---HSMFLTNDNEIYTFGYGEFGQLG 338
Score = 94 (38.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVES--LKN--IFVVQAAIGNFFT 113
+L+ + G +Y++G FG +GV + + +P+ + + L N +V A G + +
Sbjct: 258 LLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHS 317
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 145
L+ + +YTF +G +LGH ND H
Sbjct: 318 MFLTNDNEIYTFGYGEFGQLGHGE--NDTLNH 347
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 109 GNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVE 143
G+ +L +G +Y SWGN LGH ND E
Sbjct: 253 GSDHNLLLGNDGSLY--SWGNGYFGALGHGVGSNDKE 287
Score = 38 (18.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 64 DAGQVYAFGKDSFG 77
D Q+Y+ GK +G
Sbjct: 134 DDNQLYSIGKSKYG 147
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/130 (33%), Positives = 66/130 (50%)
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
WG G YG LG GN + + P V AL+D VA G T ++E V++ G +
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
LG ++D + HA + P V+ L ++ ++ IS Y+ H+ A+T G+LY +
Sbjct: 114 LG---VSDVKS--HA--MDPLEVSGL---DKDILHISAG---YY--HSAAITVDGELYMW 158
Query: 355 GAGDKGQLGI 364
G GQLG+
Sbjct: 159 GKNSSGQLGL 168
Score = 136 (52.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 44/146 (30%), Positives = 65/146 (44%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG + WG G LG G + VP V+AL+ + VA G + V++ G+V S
Sbjct: 152 DGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLS 211
Query: 287 FGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G G S LGH + G +N TP+L+ L+ I +TN H+
Sbjct: 212 WGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEG-------IKVTNVAAGLLHSACT 264
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQT 371
E+G + FG ++G V N T
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNAT 290
Score = 109 (43.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G++Y +GK+S G+ G + ++V P VE+L I + A+G+ + ++ G V ++
Sbjct: 153 GELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSW 212
Query: 126 SWGNDARLGH 135
G RLGH
Sbjct: 213 GGGGSGRLGH 222
Score = 88 (36.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP + L + + G + FG+ S + +G G + T+P ++
Sbjct: 239 TPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFG--GVRNATTPSIIS 296
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
+ + + A G + T V++R G +YT WG++
Sbjct: 297 EVP--YAEEVACGGYHTCVVTRGGELYT--WGSN 326
Score = 87 (35.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 41/185 (22%), Positives = 71/185 (38%)
Query: 200 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
PRLI++ + ++ ++G +G +G G + P ++
Sbjct: 240 PRLIKELE--GIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISE 297
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
+ A VA G Y T VV+ G++Y++G E+ LG ++ + V P L ++
Sbjct: 298 VP--YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY--VSHSPVRVEGPFLEST 353
Query: 320 LKQVN---ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
+ QV+ + IS N W G G GQLG + + P
Sbjct: 354 VSQVSCGWKHTAAISDNNVFTWGWGG----SHGTFSVDGHSSGGQLGH---GSDVDYARP 406
Query: 377 ERVDI 381
VD+
Sbjct: 407 AMVDL 411
Score = 77 (32.2 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 26/112 (23%), Positives = 48/112 (42%)
Query: 25 GKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQ 84
G+ L + TP C +L T+ +++ +V+A G + G+ GV
Sbjct: 60 GRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQL--GVS 117
Query: 85 GTKL-VTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
K P V L K+I + A G + +A ++ +G +Y + + +LG
Sbjct: 118 DVKSHAMDPLEVSGLDKDILHISA--GYYHSAAITVDGELYMWGKNSSGQLG 167
Score = 73 (30.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 229 DGRVCTWGWGRY------------GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
D V TWGWG G LGHG++ + P +V +V+A+H++ G T
Sbjct: 369 DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTA 428
Query: 277 VVSE 280
V E
Sbjct: 429 AVLE 432
Score = 50 (22.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 21/88 (23%), Positives = 39/88 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
S++G+ +A +G +YG G + S P + +L + + A G T L+
Sbjct: 44 SESGKRFAA---MWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTET 100
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPL 147
RV+ + +LG +DV+ H +
Sbjct: 101 RRVFATGLNDCGQLG----VSDVKSHAM 124
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 181 (68.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 66/282 (23%), Positives = 118/282 (41%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV++
Sbjct: 3351 SMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTS 3408
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
+G+++TF G+ RLG N P + LE + Q+ G V
Sbjct: 3409 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--GSMV 3465
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + T + P+ ++ + ++ +DG V T+G
Sbjct: 3466 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTFGQD 3523
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
R L G + P+ + L V VA G T ++ GDVY++G LG
Sbjct: 3524 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL- 3582
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G N +V P LVT L+ N R + +S W A
Sbjct: 3583 ----GHTN---HVREPTLVTVLQGKNIRQISAGRCHSAAWTA 3617
Score = 176 (67.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAIGNF-FTAV 115
T +I G V A G+ S+G G V + ++ +L+ V Q + G+ +
Sbjct: 3296 TFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMA 3353
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
L+ G V+++ G+ +LGH P + L+ VVQ+ S
Sbjct: 3354 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVT---SD 3409
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCT 234
+++ + +++K P + + Q DG V
Sbjct: 3410 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVSADGSMVWA 3467
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
+G G YG LG GN +S P+ V L + VA G + +++DG VY+FG +
Sbjct: 3468 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRL 3525
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
+G + +G+ H PQ + L V V++ + HT AL +G +YA+
Sbjct: 3526 IG---LPEGRARNHNR---PQQIPVLAGV---VIEDVAVGA----EHTLALASTGDVYAW 3572
Query: 355 GAGDKGQLGIELVNNQTE 372
G+ +GQLG+ N+ E
Sbjct: 3573 GSNSEGQLGLGHTNHVRE 3590
Score = 141 (54.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 60/231 (25%), Positives = 86/231 (37%)
Query: 68 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
VY +G G+ AE G + V P S Q G T V+ G V
Sbjct: 3256 VYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACG 3309
Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 186
G+ RLG +D+ ++ L+ V Q+ V+S
Sbjct: 3310 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3368
Query: 187 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 246
+ ++ PR IE Q + DG++ T+G G YG LG G
Sbjct: 3369 GKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3426
Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 296
N + +P+ V AL + VA G T VS DG V++FG G+ LG
Sbjct: 3427 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3477
Score = 136 (52.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 49/150 (32%), Positives = 75/150 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG GR+G L VP + + +A V G TFV+ +G V + CGE
Sbjct: 3256 VYLWGAGRHGQLAEAGRNV-MVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLA--CGE 3310
Query: 292 SASLGHNAIADGQGNRH-ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
S G GQGN +VLT ++++L + V L S + H+ ALTESG+
Sbjct: 3311 G-SYGRL----GQGNSDDLHVLT--VISAL----QGFVVTQLVTSCGSDGHSMALTESGE 3359
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
++++G GD G+LG N+ +R P +++
Sbjct: 3360 VFSWGDGDYGKLGHG--NSDRQR-RPRQIE 3386
Score = 42 (19.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 109 GNFFTAVLSREGRVYTFSW-GNDARL 133
G+F T VL E R +F G + +L
Sbjct: 1441 GDFITCVLDMEARTISFGKNGEEPKL 1466
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 139 (54.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V TWG+G +G LGH E VP+ V D K +AT T ++E G++Y +G
Sbjct: 171 GDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR 230
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
E G + G+G L+ + + +K + V +S T ALT+ G
Sbjct: 231 EEGD--GRLGLGPGRGPNEGGGLS--VPSKVKALTVPVASVSCGGFF-----TMALTKEG 281
Query: 350 KLYAFGAGDKGQLG 363
+L+ +GA +LG
Sbjct: 282 QLWNWGANSNYELG 295
Score = 133 (51.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 50/151 (33%), Positives = 72/151 (47%)
Query: 228 QDGRVCTWGW----GRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVS 279
+ G + WG GR G LG G E SVP V+AL V V+ G + T ++
Sbjct: 221 ESGELYMWGREEGDGRLG-LGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALT 278
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
++G ++++G + LG D G P V SL+ V R+ QI+ Y
Sbjct: 279 KEGQLWNWGANSNYELGRG---DNLGGWE-----PMPVPSLEGV--RITQIACGG--Y-- 324
Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
H+ ALTE GK+ ++G G GQLG + NQ
Sbjct: 325 -HSLALTEEGKVLSWGHGGHGQLGSSSLRNQ 354
Score = 126 (49.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG + WG G G LG G E VP + + +A G + ++ GDV+++G
Sbjct: 118 DGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWG 177
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G +LGH + L P+ V + S T HT A+TES
Sbjct: 178 YGGFGALGHKV--------YTRELVPRRVDDSWDCKISAIATSGT-------HTAAITES 222
Query: 349 GKLYAFGA--GDKGQLGI 364
G+LY +G GD G+LG+
Sbjct: 223 GELYMWGREEGD-GRLGL 239
Score = 115 (45.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 24/89 (26%), Positives = 49/89 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G+V +WG G +G LG + + VP ++AL D K + +A+G ++ +++ G+++ +
Sbjct: 331 EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMW 390
Query: 288 GCGESASLGHNAIADGQGNR-HANVLTPQ 315
G + LG + + Q N LT +
Sbjct: 391 GNAKDFQLGVPGLPEIQTTPVEVNFLTEE 419
Score = 105 (42.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G++ WG LG G+ P V +L V+ +A G Y + ++E+G V S+
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G LG +++ R+ V P + +L ++++V I+ S + A+T+
Sbjct: 339 GHGGHGQLGSSSL------RNQKV--PTEIEAL--ADKKIVFIASGGS-----SSAAITD 383
Query: 348 SGKLYAFGAGDKGQLGI 364
G+L+ +G QLG+
Sbjct: 384 GGELWMWGNAKDFQLGV 400
Score = 100 (40.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 28/107 (26%), Positives = 57/107 (53%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGV---QGTKL---VTSPQLVESLKNIFVVQAAIGNFF 112
T I+++G++Y +G++ G+ G+ +G ++ P V++L + V + G FF
Sbjct: 216 TAAITESGELYMWGREE-GDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASVSCGGFF 273
Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
T L++EG+++ + ++ LG EP P+ +LE + + QI
Sbjct: 274 TMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPV-PSLEGVRITQI 319
Score = 79 (32.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G ++ +GK G +G + + V P L + + A+G + L+ +G V+T+
Sbjct: 119 GDLWIWGKGDGGRLGFGQENSVFV--PNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTW 176
Query: 126 SWGNDARLGHHTEPNDVEP 144
+G LGH ++ P
Sbjct: 177 GYGGFGALGHKVYTRELVP 195
Score = 67 (28.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ ++ G V+ +G FG + V +LV P+ V+ + + A TA ++
Sbjct: 164 SVALTHQGDVFTWGYGGFGALGHKVYTRELV--PRRVDDSWDCKISAIATSGTHTAAITE 221
Query: 119 EGRVYTFSWGN---DARLG 134
G +Y WG D RLG
Sbjct: 222 SGELYM--WGREEGDGRLG 238
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 6/26 (23%), Positives = 17/26 (65%)
Query: 67 QVYAFGKDSFGEAEYGVQGTKLVTSP 92
Q++++G+ + G+ G++ ++ SP
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSP 74
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 143 (55.4 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 47/143 (32%), Positives = 71/143 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF-- 287
G++ T+G G +G LGHG+ E + PK V++L +K I V+ G + T + E + F
Sbjct: 414 GQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYN 473
Query: 288 --GCGESASLGHNAIADGQGNR--HANV---LTPQLVTSLKQVNERVVQISLTNSIYWNA 340
CG+ + G DG R HA+ L P VT L ++ +++S W
Sbjct: 474 AKSCGKLFTWG-----DGDKGRLGHADSKRKLVPTCVTEL--IDHDFIKVSCG----WTL 522
Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
T AL+ SG +Y G+ GQLG
Sbjct: 523 -TVALSISGTVYTMGSSIHGQLG 544
Score = 123 (48.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/135 (31%), Positives = 55/135 (40%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G++ TWG G G LGH + + + VP V L D I V+ G T +S G VY+ G
Sbjct: 478 GKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGS 537
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG D N LT Q V + + H LT G
Sbjct: 538 SIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSH---------------HVAVLTSFG 582
Query: 350 KLYAFGAGDKGQLGI 364
+Y +G G GQLG+
Sbjct: 583 NVYTWGKGMNGQLGL 597
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 46/172 (26%), Positives = 79/172 (45%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLG-HGNEECE 251
++ D P+L+E + ++Q + G V WG G G LG N + +
Sbjct: 276 NQNDALSPKLLESATMFDVQSISLGAKHAALVT--RQGEVFCWGNGNSGKLGLKVNIDID 333
Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
PK V++L DV VA D+ T V+E G++Y +G + ++ + G++
Sbjct: 334 H-PKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGI-DGGTI------EQSGSQF--- 382
Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
LT ++ L + +S+ W HT +T SG+L+ +G+G G LG
Sbjct: 383 LTRKISDVL---GGSLTVLSVACGA-W--HTAIVTSSGQLFTYGSGTFGVLG 428
Score = 107 (42.7 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 43/176 (24%), Positives = 80/176 (45%)
Query: 196 DEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
D HP+ +E + + ++ + G + WG G + + + K
Sbjct: 331 DIDHPKRVESLEDVAVRSVACSDHQTCAVT--ESGELYLWGIDG-GTIEQSGSQFLT-RK 386
Query: 256 VVQALN-DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ L + + VA G + T +V+ G ++++G G LGH ++ +V P
Sbjct: 387 ISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLE--------SVTKP 438
Query: 315 QLVTSLKQVNERVVQISL----TNSIYWNAHT--FALTES-GKLYAFGAGDKGQLG 363
+ V SL+++ +V+ +S T +I A+ F +S GKL+ +G GDKG+LG
Sbjct: 439 KEVESLRRM--KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLG 492
Score = 102 (41.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/98 (27%), Positives = 50/98 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-- 116
T +++ +GQ++ +G +FG +G + VT P+ VESL+ + V+ + G + TA +
Sbjct: 407 TAIVTSSGQLFTYGSGTFGVLGHG--SLESVTKPKEVESLRRMKVISVSCGPWHTAAIVE 464
Query: 117 -SREGRVYT-------FSWGND--ARLGHHTEPNDVEP 144
+ + + Y F+WG+ RLGH + P
Sbjct: 465 TANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVP 502
Score = 97 (39.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 24 NGKRNLLGREVN---GTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
NG LG +VN P SL T ++++G++Y +G D G E
Sbjct: 318 NGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG-GTIE 376
Query: 81 YGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH--- 136
G++ +T ++ + L ++ V+ A G + TA+++ G+++T+ G LGH
Sbjct: 377 QS--GSQFLTR-KISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLE 433
Query: 137 --TEPNDVE 143
T+P +VE
Sbjct: 434 SVTKPKEVE 442
Score = 77 (32.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 91 SPQLVESLKNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 148
SP+L+ES +F VQ+ ++G A+++R+G V+ + GN +LG D++ HP +
Sbjct: 282 SPKLLESA-TMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNI-DID-HPKRV 338
Query: 149 GTLENIPV 156
+LE++ V
Sbjct: 339 ESLEDVAV 346
Score = 77 (32.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 31/113 (27%), Positives = 47/113 (41%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V T G +G LG + +SV V+ L +A+G + V++ G+VY++G
Sbjct: 530 GTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGK 589
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
G + LG + D L +LV S+ I L I N T
Sbjct: 590 GMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQT 642
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 230 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GRV WG G G LG G +E PK + LND+K I V+ G Y + +S+D V+S+G
Sbjct: 94 GRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G + +PQ V SL+ + + Q++ AH+FAL+
Sbjct: 154 KNSHGQLG-------LGKEFPSQASPQRVRSLEGIP--LAQVAAGG-----AHSFALSLC 199
Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNP 376
G + +G+ GQL + N + P
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVPVQSNKP 227
Score = 143 (55.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 51/154 (33%), Positives = 74/154 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+D +V +WG +G LG G E ++ P+ V++L + VA G +F +S G S
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT--S 202
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G S S G A++ +N P V +LK + VV IS + AHT LT
Sbjct: 203 FGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD-----AHTAVLT 252
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
+ GK++ FG GQLG + ER+D
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 117 (46.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/104 (27%), Positives = 61/104 (58%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 119 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQI 159
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQV 186
Score = 103 (41.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 234 TWGWGRYGC----LGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
++GWG L N +S P V AL ++ ++++ GD T V+++DG V++FG
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
S LG++ + +G PQLV ++++ V QI + Y HT A +
Sbjct: 262 DNRSGQLGYSPTPEKRG--------PQLV---ERIDGLVSQIDCGS--Y---HTLAYVHT 305
Query: 349 -GKLYAFGAG 357
G++ +FG G
Sbjct: 306 TGQVVSFGHG 315
Score = 82 (33.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 286
QDG+V T+G R G LG+ + P++V+ ++ + + + G Y T V G V S
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVS 311
Query: 287 FGCGES 292
FG G S
Sbjct: 312 FGHGPS 317
Score = 77 (32.2 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 22/102 (21%), Positives = 53/102 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++L+ +V + G +S G+ G +G + P+ +++L+ + V + G + +
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQL--GRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCH 92
Query: 119 EGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
+GRV+ + G++ +LG + P ++ TL +I ++Q+
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQV 133
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 169 (64.5 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 49/142 (34%), Positives = 71/142 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG + WG+ G +G G+ + P KV L+ + +++A G ++ V + G+VY +
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L + V QI + AHT ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPVRVAALHGMC--VNQI-----VCGYAHTLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNN 369
G LYA+GA GQLG NN
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNN 272
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG V WG Y LG+G P +V L + I VA G + + ++ DG++++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFA 151
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G +G + A N TP+ VT+ +RVV I+ + + A+
Sbjct: 152 WGYNNCGQVGSGSTA--------NQPTPRKVTNCLHT-KRVVNIACGQT-----SSMAVL 197
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
+SG++Y +G GQLG+ NQ
Sbjct: 198 DSGEVYGWGYNGNGQLGLGNNGNQ 221
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ + VPK ++AL +K++ +G + + +EDG VY++G
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHV-LLTTEDGVVYAWG- 100
Query: 290 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
HN + G G + + Q+ T+L + ++V++++ + H+ AL
Sbjct: 101 -------HNGYSQLGNGTTNQGIAPVQVCTNL--LIKQVIEVACGSH-----HSMALAAD 146
Query: 349 GKLYAFGAGDKGQLGIELVNNQ 370
G+L+A+G + GQ+G NQ
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ 168
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 57/243 (23%), Positives = 104/243 (42%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 179
G V+ + + N ++G + N P + G L+N V+ I +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVD--TG-EVY 227
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S ++ P + Q + +Q +G++ WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT--DEGQIYAWGANS 285
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYSFG-C-GESASL 295
YG LG GN+ +S P V D + I +A +T+ ++ G VY +G C G+S L
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKD-RIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 296 GHN 298
H+
Sbjct: 345 PHH 347
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 45/144 (31%), Positives = 74/144 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG+ G +G G+ + +P+ V L + +++A G + V + G+VY +
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVW 229
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG + GN+ TP V +L+ + RV +++ Y AHT LT+
Sbjct: 230 GYNGNGQLGLGS----SGNQP----TPCRVAALQGI--RVQRVACG---Y--AHTLVLTD 274
Query: 348 SGKLYAFGAGDKGQLGIELVNNQT 371
G++YA+GA GQLG +NQ+
Sbjct: 275 EGQIYAWGANSYGQLGTGNKSNQS 298
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 70/294 (23%), Positives = 122/294 (41%)
Query: 67 QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVYT 124
+++ G + G G +Q T P+ ++SL + + G+ VL+ +G V+T
Sbjct: 66 EIFVLGTNCSGCLGVGDIQST---IEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 182
WG++A +LG+ T + + P + L N V+++ S V++
Sbjct: 123 --WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT---SDGEVFAWG 177
Query: 183 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 242
S ++ PR + L N G V WG+ G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGC-LQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
LG G+ + P V AL ++ VA G T V++++G +Y++G LG
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG------ 290
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFG 355
GN+ +N P V K +R+++I+ +S AHT A T+ G +Y +G
Sbjct: 291 -TGNK-SNQSYPTPVVVEK---DRIIEIAACHS----AHTSAAKTQGGHVYMWG 335
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 227 GQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
GQ+ G V G G G LG G + E + L + + G T +S+ G+VY
Sbjct: 31 GQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPE-GIVQAVAGGMHTVCLSDTGNVY 89
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+FGC + +LG + +G A V + E+++Q+S +S H+ AL
Sbjct: 90 TFGCNDEGALGRDTSEEGSETVPAKV----------DLGEKIIQVSAGDS-----HSAAL 134
Query: 346 TESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDID 382
TE G +Y +G+ + G +G L+ + P +V ID
Sbjct: 135 TEDGGVYVWGSFRDNNGVIG--LLEPMKKCTVPVKVPID 171
Score = 127 (49.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 44/148 (29%), Positives = 74/148 (50%)
Query: 228 QDGRVCTWGWGR--YGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
+DG V WG R G +G ++C +VP V+ D + + +G+ +++ G+
Sbjct: 136 EDGGVYVWGSFRDNNGVIGLLEPMKKC-TVP--VKVPIDKPVVKIVSGNDHLVMLTAHGE 192
Query: 284 VYSFGCGESASLGHNA--IADGQGNRHA-NVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
+Y+ GCGE LG A A+ G + +L PQ+V +K +VV + Y+
Sbjct: 193 LYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVI-IKP-RGKVVFTDVFCGAYF-- 248
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVN 368
TFA+++ G +Y FG + QLG + N
Sbjct: 249 -TFAVSKEGHVYGFGLSNYHQLGTQSTN 275
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 46/147 (31%), Positives = 66/147 (44%)
Query: 230 GRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
G V T+G G LG E E+VP V L + K I V+ GD + ++EDG VY +
Sbjct: 86 GNVYTFGCNDEGALGRDTSEEGSETVPAKVD-LGE-KIIQVSAGDSHSAALTEDGGVYVW 143
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G +N + G P V +++ VV+I + N H LT
Sbjct: 144 GSFRD----NNGVI-GLLEPMKKCTVPVKVP----IDKPVVKI-----VSGNDHLVMLTA 189
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERG 374
G+LY G G++GQLG + + RG
Sbjct: 190 HGELYTSGCGEQGQLG-RVAEHFANRG 215
Score = 101 (40.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G+ + G YG LG G + E S P VV ++DV+ VA G ++ V++ G V+S+
Sbjct: 309 EGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQV--VACGASVSYAVTKQGSVFSW 366
Query: 288 GCGESASLG 296
G G + LG
Sbjct: 367 GMGTNLQLG 375
Score = 94 (38.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 39/138 (28%), Positives = 54/138 (39%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
GQ GRV R G G E +++ V V G Y TF VS++G VY
Sbjct: 202 GQLGRVAEHFANRGGRKGL-MRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYG 260
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG LG + N P ++S K N + + + HT L
Sbjct: 261 FGLSNYHQLGTQST-----N---TCFVPVKLSSFK--NSTTSWVGFSGGQH---HTLCLN 307
Query: 347 ESGKLYAFGAGDKGQLGI 364
GK Y+ G + G+LG+
Sbjct: 308 SEGKAYSLGRAEYGRLGL 325
Score = 81 (33.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 26/83 (31%), Positives = 33/83 (39%)
Query: 64 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
+ G V G+ G+ G + P LV + I VQA G T LS G VY
Sbjct: 33 EKGLVLVLGQGDVGQLGLG-EDVMERKKPALVTLPEGI--VQAVAGGMHTVCLSDTGNVY 89
Query: 124 TFSWGNDARLGHHTEPNDVEPHP 146
TF ++ LG T E P
Sbjct: 90 TFGCNDEGALGRDTSEEGSETVP 112
Score = 78 (32.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ +SD G VY FG + G T P V+ + I +Q + G+ +A L+
Sbjct: 79 TVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKI--IQVSAGDSHSAALTE 136
Query: 119 EGRVYTFSWGN 129
+G VY WG+
Sbjct: 137 DGGVYV--WGS 145
Score = 61 (26.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+++ G VY +G G+ + K T P V K VV+ GN +L+ G
Sbjct: 134 LTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKP--VVKIVSGNDHLVMLTAHG 191
Query: 121 RVYTFSWGNDARLGHHTE 138
+YT G +LG E
Sbjct: 192 ELYTSGCGEQGQLGRVAE 209
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 46/136 (33%), Positives = 67/136 (49%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-E 347
G LGH+++ D + P+ V L + V QI+ HT A
Sbjct: 83 AGSCGQLGHDSMNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVPS 127
Query: 348 SGKLYAFGAGDKGQLG 363
SG +YAFG G KGQLG
Sbjct: 128 SGLIYAFGCGAKGQLG 143
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG + WG+ G +G G+ + P+ V L D + +A G ++ V +G+VY +
Sbjct: 146 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP V +L V ++QI+ Y AHT ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPCRVAALHGVC--ILQIACG---Y--AHTLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNNQ 370
G LYA+GA GQLG +NQ
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQ 273
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 70/293 (23%), Positives = 122/293 (41%)
Query: 67 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE-GRVYTF 125
+V+ FG + G + +V P+ +E+L + + G+ +L E G VY
Sbjct: 42 EVFVFGLNCSNCLGTGDSQSTIV--PKKLEALCGKKISSLSYGSGPHVLLCTEDGEVY-- 97
Query: 126 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 183
+WG++ ++LG+ V P + L V+++ +Y+
Sbjct: 98 AWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGD---LYAWGY 154
Query: 184 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 243
S ++ PR + L + +G V WG+ G L
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSNC-LQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQL 213
Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
G GN + P V AL+ V + +A G T ++++G +Y++G LG
Sbjct: 214 GLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG------- 266
Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFG 355
GN+ +N L+P + K ERVV+I+ +S AHT A T+SG++Y +G
Sbjct: 267 TGNK-SNQLSPLQIMMEK---ERVVEIAACHS----AHTSAAKTQSGQVYMWG 311
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/151 (29%), Positives = 77/151 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V +G CLG G+ + VPK ++AL + ++ +G + + +EDG+VY++G
Sbjct: 43 VFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHV-LLCTEDGEVYAWGH 101
Query: 290 GESASLGHNAIADGQGNRHANVLTP-QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
+ LG+ A G +TP Q+ T+L + ++V++++ + H+ AL+
Sbjct: 102 NGYSQLGNGATNQG--------VTPVQVCTNL--LLKKVIEVACGSH-----HSMALSFD 146
Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
G LYA+G + GQ+G NQ P RV
Sbjct: 147 GDLYAWGYNNCGQVGSGSTANQP---TPRRV 174
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 122 (48.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+V+A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 915 EVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 966
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 967 GPSTQVTAGS--N------HTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 115 (45.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 933 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLVMDGQVFTF 991
Query: 288 GCGESASLG 296
G LG
Sbjct: 992 GSFSKGQLG 1000
Score = 104 (41.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 628 VISKDGELYMFGKDAI----YS-------DSSSLVSDLKGHFVTQVAMGKAHTCVLMKNG 676
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 677 EVWTFGVNNKGQCGRDT 693
Score = 75 (31.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 297 HNAIADGQGNRHANVLTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
H + +G + A+ +T S++ R VQ+S + H+ L E+G +Y FG
Sbjct: 887 HKDASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSC--GFH---HSVVLMENGDVYTFG 941
Query: 356 AGDKGQLGIELVNNQTERGNPERV 379
G GQLG VN+ RG P V
Sbjct: 942 YGQHGQLGHGDVNS---RGCPTLV 962
Score = 70 (29.7 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G V+ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 571 LLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVIS 630
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 631 KDGELYMF--GKDA 642
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 130 (50.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/149 (28%), Positives = 75/149 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
G + T+G G +G LG G + +S PK+VQ+L I +++G + V++ G V+SF
Sbjct: 357 GLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSF 416
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG ++ Q + Q TS +Q + + I ++ Y H+ A+++
Sbjct: 417 GRNDQGQLGIGCFSNQQ-TIPKQIQWFQ--TSQQQQQQPINIIKVSAGGY---HSIAISD 470
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNP 376
+ YA+G D G LG ++ Q +R P
Sbjct: 471 NNDTYAWGRSDYGVLGTS-IDVQGDRNLP 498
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
WG G + N S+ + N K + ++TG + +++ G++Y+FG G LG
Sbjct: 164 WGN-GIRNYKNCNMSSIG-FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLG 221
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
H GN + +P+LV Q + +S+ N H+ ALT GK+Y++G
Sbjct: 222 H-------GNLES-YSSPKLVEFF-QTKPSLRVVSIANG---GKHSLALTICGKVYSWGG 269
Query: 357 GDKGQLGIELVNNQTERGNPERVDIDLS 384
D QLG+ ++ + P+ ++ ++S
Sbjct: 270 NDSCQLGLGNGSSSSYYSLPQLINFNIS 297
Score = 114 (45.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+I+D G ++ FG+ G G Q + ++P+LV+SL+ F++ + G + VL+ +G
Sbjct: 352 VITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKG 411
Query: 121 RVYTFSWGNDARLG 134
V++F + +LG
Sbjct: 412 LVFSFGRNDQGQLG 425
Score = 110 (43.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
N +K + ++ G + V+++ G +++FG G+ LG G+ + TP+LV SL
Sbjct: 336 NKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL-----GEQSLLMQS-TPKLVQSL 389
Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
+ ++ +S H+ LT G +++FG D+GQLGI +NQ
Sbjct: 390 Q--GHFIIDMSSGGG-----HSLVLTNKGLVFSFGRNDQGQLGIGCFSNQ 432
Score = 109 (43.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 230 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALND--------VKAIHVATGDYTTFVVSE 280
G V ++G G LG G +++PK +Q + I V+ G Y + +S+
Sbjct: 411 GLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD 470
Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
+ D Y++G + LG + D QG+R+ P L+ S V + V I +++
Sbjct: 471 NNDTYAWGRSDYGVLGTSI--DVQGDRNL----PVLINSNSVVVDNVKFIDVSSGFQ--- 521
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
H A++ G LY++G +LG + NQ
Sbjct: 522 HNVAMSIDGSLYSWGCNAGQRLGFKSDENQ 551
Score = 85 (35.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVVQAAIGNFFTAVLSR 118
I+D G +Y FG G+ +G + +SP+LVE + ++ VV A G + L+
Sbjct: 203 ITDQGNLYTFGDGLLGKLGHG--NLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTI 260
Query: 119 EGRVYTFSWG-NDA-RLG 134
G+VY SWG ND+ +LG
Sbjct: 261 CGKVY--SWGGNDSCQLG 276
Score = 53 (23.7 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 200 PRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC-LGHGNEECESVPKVV 257
P+L+E FQ +L+ G+V +WG G C LG GN S +
Sbjct: 231 PKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWG-GNDSCQLGLGNGSSSSYYSLP 289
Query: 258 QALN 261
Q +N
Sbjct: 290 QLIN 293
Score = 51 (23.0 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
+V + G ++ ++ +G +YTF G +LGH
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGH 222
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/143 (34%), Positives = 76/143 (53%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G V WG+ G +G G+ + P KV L + +++A G ++ V+++G+VY +
Sbjct: 146 EGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGW 205
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN + N LTP + +L+ V+QI+ S Y AH+ ALT+
Sbjct: 206 GYNGNGQLG-------LGN-NGNQLTPCRLIALQGFC--VLQIA---SGY--AHSLALTD 250
Query: 348 SGKLYAFGAGDKGQLGIELVNNQ 370
G LYA+GA GQLG +NQ
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQ 273
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 59/277 (21%), Positives = 119/277 (42%)
Query: 82 GVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYTFSWGND--ARLGHHTE 138
G ++ +P+ ++ L ++ + G+ +++ +G +Y +WG++ ++LG+ T
Sbjct: 55 GTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELY--AWGHNGYSQLGNGTT 112
Query: 139 PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEK 198
V P + L+ V ++ + V++ S ++
Sbjct: 113 NQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGE---VFAWGYNNCGQVGSGSTANQP 169
Query: 199 HPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
PR + L N +G V WG+ G LG GN + P +
Sbjct: 170 TPRKVSNC-LQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLI 228
Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
AL + +A+G + ++++G +Y++G LG GN+ +N L+P V
Sbjct: 229 ALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLG-------TGNK-SNQLSPVQVM 280
Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
+ K ER+V+I+ +S + +A A T+SG++Y +G
Sbjct: 281 TEK---ERIVEIAACHSTHTSA---AKTQSGQVYMWG 311
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSF 287
D V G CLG G+ + PK + L+ K I ++ G +V+EDG++Y++
Sbjct: 40 DDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAW 99
Query: 288 GCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
G HN + G G + V +P LV++ Q +RV ++S + H+ ALT
Sbjct: 100 G--------HNGYSQLGNGTTNQGV-SPILVSTNLQ-GKRVTEVSCGSH-----HSLALT 144
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
G+++A+G + GQ+G NQ
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQ 168
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 147 (56.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
+ G+++ +G+ + G +G L+ + P +V +D+
Sbjct: 136 DDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDV 172
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 228 QDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
+ G+V ++G G LG E E VP V+ L + K + V+ GD T +++DG V+
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTDDGRVF 141
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G +N + G + P V Q++ VV+++ N H L
Sbjct: 142 LWGSFRD----NNGVI-GLLEPMKKSMVPVQV----QLDVPVVKVASGND-----HLVML 187
Query: 346 TESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 379
T G LY G G++GQLG EL N+ R ER+
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERL 223
Score = 109 (43.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 229 DGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
DGRV WG R G +G +S VP VQ DV + VA+G+ +++ DGD+Y
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 286 SFGCGESASLGH-NAIADGQGNRHA--NVLTPQLV 317
+ GCGE LG + +G R +L P+ V
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Score = 87 (35.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 168 (64.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 46/140 (32%), Positives = 69/140 (49%)
Query: 230 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GRV WG G G LG G +E +P ++ LND+K V+ G Y + +SE G V+S+G
Sbjct: 95 GRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWG 154
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG G + + +PQ V SL + + Q++ AH+FAL+ S
Sbjct: 155 SNSDGQLG-------LGKKFPSQASPQRVRSLDGIP--LAQVAAGG-----AHSFALSLS 200
Query: 349 GKLYAFGAGDKGQLGIELVN 368
G + +G + GQL + N
Sbjct: 201 GTSFGWGRNNAGQLALHKNN 220
Score = 133 (51.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 46/158 (29%), Positives = 76/158 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G+V +WG G LG G + ++ P+ V++L+ + VA G +F +S G +
Sbjct: 146 EGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFG 205
Query: 287 FGCGESASLG-HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G + L H GQ + P +++LK + V+ IS Y HT L
Sbjct: 206 WGRNNAGQLALHKNNVSGQSYK------PYSISALKNLG--VIYISCG---Y--EHTVVL 252
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD-ID 382
T++GK++ FG GQLG + E+ P+ V+ ID
Sbjct: 253 TQNGKVFTFGDNTYGQLGH---SPTAEKSGPQLVEGID 287
Score = 112 (44.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 31/105 (29%), Positives = 59/105 (56%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
++ + G+V+A+G S G+ G + T L+ P +++L +I + Q + G++ + LS
Sbjct: 88 SLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PMKIKTLNDIKIKQVSCGHYHSLALS 145
Query: 118 REGRVYTFSWGN--DARLGHHTE-PNDVEPHPLLGTLENIPVVQI 159
G+V FSWG+ D +LG + P+ P + +L+ IP+ Q+
Sbjct: 146 EGGQV--FSWGSNSDGQLGLGKKFPSQASPQRVR-SLDGIPLAQV 187
Score = 109 (43.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 32 REVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
+E N P+ ++L ++ +S+ GQV+++G +S G+ G + S
Sbjct: 114 KETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQA-S 172
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDA-RLGHH---TEPNDVEPHP 146
PQ V SL I + Q A G + LS G +F WG N+A +L H +P+
Sbjct: 173 PQRVRSLDGIPLAQVAAGGAHSFALSLSGT--SFGWGRNNAGQLALHKNNVSGQSYKPYS 230
Query: 147 LLGTLENIPVVQI 159
+ L+N+ V+ I
Sbjct: 231 I-SALKNLGVIYI 242
Score = 98 (39.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 234 TWGWGRYGC----LGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
++GWGR L N +S P + AL ++ I+++ G T V++++G V++FG
Sbjct: 203 SFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFG 262
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-E 347
LGH+ A+ G PQLV + + V QI + Y HT A
Sbjct: 263 DNTYGQLGHSPTAEKSG--------PQLVEGIDGL---VSQIDCGS--Y---HTLAYVYT 306
Query: 348 SGKLYAFG 355
+GK+ +FG
Sbjct: 307 TGKVVSFG 314
Score = 84 (34.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 286
Q+G+V T+G YG LGH +S P++V+ ++ + + + G Y T V G V S
Sbjct: 254 QNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVS 312
Query: 287 FG 288
FG
Sbjct: 313 FG 314
Score = 74 (31.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 23/103 (22%), Positives = 51/103 (49%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 117
++L+ GQV++ G + G + G +G + + +L+ + V + G + +
Sbjct: 35 SLLLLSNGQVHSCGDN--GRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKEHSLAVC 92
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
+GRV+ + G++ +LG E + P+ + TL +I + Q+
Sbjct: 93 HKGRVFAWGAGSEGQLGTG-EFKETNLIPMKIKTLNDIKIKQV 134
Score = 41 (19.5 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
QAA G + +L G+V++ +LG P + + LE + V
Sbjct: 27 QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHV 78
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 122 (48.0 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+V+A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 901 EVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 952
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 953 GPSTQVTAGS--N------HTAVLVMDGQVFTFGSFSKGQLG 986
Score = 115 (45.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLVMDGQVFTF 977
Query: 288 GCGESASLG 296
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 104 (41.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 614 VISKDGELYMFGKDAI----YS-------DSSSLVSDLKGHFVTQVAMGKAHTCVLMKNG 662
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 663 EVWTFGVNNKGQCGRDT 679
Score = 75 (31.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 297 HNAIADGQGNRHANVLTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
H + +G + A+ +T S++ R VQ+S + H+ L E+G +Y FG
Sbjct: 873 HKDASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSC--GFH---HSVVLMENGDVYTFG 927
Query: 356 AGDKGQLGIELVNNQTERGNPERV 379
G GQLG VN+ RG P V
Sbjct: 928 YGQHGQLGHGDVNS---RGCPTLV 948
Score = 70 (29.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G V+ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 557 LLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVIS 616
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 617 KDGELYMF--GKDA 628
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 135 (52.6 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
TD P+++E LL + + V WG G G LG G EC + P
Sbjct: 435 TDVSQPKIVEA--LLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSP 492
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ V + +A V G ++ V++ + + + G LG + I+ + + +
Sbjct: 493 QQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEE 552
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
V + Q + + Q + + AH+ A+T SG+ Y FG+ GQLG N
Sbjct: 553 ATVFTCAQ-SAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRN 606
Score = 132 (51.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+G G GCLGHGN S PK+V+AL + + VA G VS + +V+++G
Sbjct: 416 GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGR 475
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G++ LG + H N +PQ V + + V + +S+ LT +
Sbjct: 476 GDNGRLGLGTL-----ECH-N--SPQQVAVPPEHEAQRVICGIDSSM-------VLTVNN 520
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPE 377
++ A G+ +LG++ +++ E +PE
Sbjct: 521 QILACGSNRCNKLGLDRISS-AEEPSPE 547
Score = 93 (37.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G+ T+G ++G LG + VP +V L +K VA GD T + DG+V ++G
Sbjct: 586 GQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGK 645
Query: 290 GESASLGHNAIADGQGNR-HANVLTPQLVTSL 320
G LG G P +VTS+
Sbjct: 646 GARGRLGRKDEETGMPRPVQLEETHPYVVTSV 677
Score = 91 (37.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G T V+ P++VE+L +VQ A G +S
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG-NFTD-VSQPKIVEALLGYEMVQVACGASHVLAVSN 466
Query: 119 EGRVYTFSWGNDARLGH-----HTEPNDVEPHP 146
E V+ + G++ RLG H P V P
Sbjct: 467 EREVFAWGRGDNGRLGLGTLECHNSPQQVAVPP 499
Score = 82 (33.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 32/123 (26%), Positives = 51/123 (41%)
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
LN + G + V+ G Y+FG + LG N+ R++ V P LV
Sbjct: 564 LNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSC------RNSRV--PHLVVG 615
Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
L+ + VV +A T A+ G++ +G G +G+LG E G P V
Sbjct: 616 LRAMKVTVVACG-------DAFTVAIGADGEVCTWGKGARGRLG----RKDEETGMPRPV 664
Query: 380 DID 382
++
Sbjct: 665 QLE 667
Score = 81 (33.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
G DG VCTWG G G LG +EE +P+ VQ
Sbjct: 635 GADGEVCTWGKGARGRLGRKDEET-GMPRPVQ 665
Score = 72 (30.4 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + + G+ FTA L+ G + TF G++ LGH DV ++ L
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNF-TDVSQPKIVEALL 447
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 448 GYEMVQV 454
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
V KD A+ Q KL++ P ++E +N F+ A+
Sbjct: 37 VEQMSKDERLAAQNECQVLKLLSHPNVIEYYEN-FLEDKAL 76
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 132 (51.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 45/168 (26%), Positives = 73/168 (43%)
Query: 196 DEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
DE P+L+ L ++ G G+V TWG G G LGHG+ ++PK
Sbjct: 35 DELLPQLLSLTSLPSISMLACGGAHVIALTSG--GKVFTWGRGSSGQLGHGDILNITLPK 92
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+V +D A G + VS+ G +++ G G LGH G+ ++ TP
Sbjct: 93 LVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH-------GDT-LSLSTPA 144
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
V+ + ++V + H+ L ++ FG+G +GQLG
Sbjct: 145 KVSHFNNDSVKMVACGMR-------HSLVLFAGNQVCGFGSGKRGQLG 185
Score = 122 (48.0 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 58/239 (24%), Positives = 96/239 (40%)
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 178
E +V+++ G D +LG T+ D E P L +L ++P + + SG V
Sbjct: 14 EEQVWSWGAGTDGQLGT-TKLQD-ELLPQLLSLTSLPSISMLACGGAHVIALT--SGGKV 69
Query: 179 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 238
++ + P+L+ F + G + T G G
Sbjct: 70 FTWGRGSSGQLGHGDILNITLPKLVSFFD--DSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG+ S P V N+ VA G + V+ V FG G+ LG +
Sbjct: 128 SFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFS 187
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
+ +R +V P +V+ LK V VV+IS H+ A++ G+ +++G G
Sbjct: 188 S------DRIKSVNLPCVVSGLKDVE--VVRISANGD-----HSAAISADGQFFSWGRG 233
Score = 88 (36.0 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV----KAIHVATGDYTTFVV 278
++G V TWGWG +G LG GN ++ P++V +L + K I V G T+ V
Sbjct: 322 ENGEVKTWGWGEHGQLGLGNTNDQTSPELV-SLGSIDLRTKEIKVYCGSGFTYAV 375
Score = 87 (35.7 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
++ G+V+ +G+ S G+ +G +T P+LV + + QAA G + +S G
Sbjct: 63 LTSGGKVFTWGRGSSGQLGHG--DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGC 120
Query: 122 VYTFSWGNDARLGH 135
++T G+ +LGH
Sbjct: 121 IFTCGNGSFGQLGH 134
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 61 LISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
L+ AG QV FG G+ + K V P +V LK++ VV+ + +A +S +
Sbjct: 165 LVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISAD 224
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPL 147
G+ FSWG G P PL
Sbjct: 225 GQF--FSWGRGFCGGPDVHAPQSLPSPL 250
Score = 83 (34.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+SD+G ++ G SFG+ +G T +++P V N V A G + VL +
Sbjct: 115 VSDSGCIFTCGNGSFGQLGHG--DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQ 172
Query: 122 VYTFSWGNDARLGHHTEP-NDVEPHPLLGTLENIPVVQI 159
V F G +LG ++ V ++ L+++ VV+I
Sbjct: 173 VCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRI 211
Score = 79 (32.9 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
H+ A+TE+G++ +G G+ GQLG+ N+QT +PE V +
Sbjct: 316 HSAAVTENGEVKTWGWGEHGQLGLGNTNDQT---SPELVSL 353
Score = 71 (30.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
+ E++ + V + VK + +A G + V+E+G+V ++G GE LG GN
Sbjct: 290 DSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG-------LGNT 342
Query: 308 HANVLTPQLVTSLKQVNERVVQISL 332
+ +P+LV SL ++ R +I +
Sbjct: 343 NDQT-SPELV-SLGSIDLRTKEIKV 365
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
DG+ + WGR C G +S+P + + VA G +++ DG+V+ G
Sbjct: 224 DGQF--FSWGRGFCGGPDVHAPQSLP------SPLSFREVAVGWNHALLLTVDGEVFKLG 275
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 122 (48.0 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 952
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT AL G+++ FG+ KGQLG
Sbjct: 953 GPSTQVTAGS--N------HTAALLMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T + DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAALLMDGQVFTF 977
Query: 288 GCGESASLG 296
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 103 (41.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 614 VISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNG 662
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 663 EVWTFGVNNKGQCGRDT 679
Score = 71 (30.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G ++ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 557 LLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 616
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 617 KDGELYMF--GKDA 628
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 121 (47.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 952
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 953 GPSTQVTACS--N------HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 110 (43.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL A ++T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSNHTA-VLLMDGQVFTF 977
Query: 288 GCGESASLG 296
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 104 (41.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 614 VISKDGELYMFGKDAI----YS-------DSSSLVSDLKGHFVTQVAMGKAHTCVLMKNG 662
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 663 EVWTFGVNNKGQCGRDT 679
Score = 74 (31.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 30/82 (36%), Positives = 41/82 (50%)
Query: 302 DGQGNR---HANVLTPQLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
DG G+R A+ +T S++ E R VQ+S + H+ L E+G +Y FG G
Sbjct: 875 DGSGDRGEKDASKITTYPPGSVRFDCELRAVQVSC--GFH---HSVVLMENGDVYTFGYG 929
Query: 358 DKGQLGIELVNNQTERGNPERV 379
GQLG VN+ RG P V
Sbjct: 930 QHGQLGHGDVNS---RGCPTLV 948
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G V+ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 557 LLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 616
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 617 KDGELYMF--GKDA 628
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V D+ + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDI--VQAEAGGMHTVCLSKSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGA--GDKGQLGI 364
E G+++ +G+ + G +G+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGL 155
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
+ G+V ++G G LG E E VP V+ L + K + V+ GD T ++EDG V+
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTEDGRVF 141
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G +N + G + P V Q++ VV+++ N H L
Sbjct: 142 LWGSFRD----NNGVI-GLLEPMKKSMVPVQV----QLSMPVVKVASGND-----HLVML 187
Query: 346 TESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 379
T G+LY G+G++GQLG EL N+ R ER+
Sbjct: 188 TADGELYTLGSGEQGQLGRVPELFANRGGRQGLERL 223
Score = 103 (41.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 79 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 134
Query: 117 SREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +GRV F WG N+ +G EP P+ L ++PVV++
Sbjct: 135 TEDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-SMPVVKV 177
Score = 100 (40.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 229 DGRVCTWGWGRYGCLGH-GNEECESVPKVVQAL-NDVKA-IHVATGDYTTFVVSEDGDVY 285
+G V +G Y LG G E C VP+ + + N K+ + + G + T + +G Y
Sbjct: 258 EGHVYGFGLSNYHQLGTPGTESC-FVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAY 316
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
S G E LG G+G +V P L++ L V+ ++ S+ +A+
Sbjct: 317 SLGRAEYGRLGL-----GEGAEEKSV--PTLISRLPAVSS----VACGASV-----GYAV 360
Query: 346 TESGKLYAFGAGDKGQLG 363
T+ G+++A+G G QLG
Sbjct: 361 TKDGRVFAWGMGTNYQLG 378
Score = 99 (39.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/152 (29%), Positives = 59/152 (38%)
Query: 229 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 272
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
Y TF +S +G VY FG LG G V PQ +TS K + V+ S
Sbjct: 250 YFTFAISSEGHVYGFGLSNYHQLGT------PGTESCFV--PQNLTSFKNSTKSWVRFSG 301
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
HT + G+ Y+ G + G+LG+
Sbjct: 302 GQH-----HTVCMDSEGRAYSLGRAEYGRLGL 328
Score = 94 (38.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 229 DGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+GR + G YG LG G E +SVP ++ L V + VA G + V++DG V+++
Sbjct: 312 EGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSS--VACGASVGYAVTKDGRVFAW 369
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G + LG GQ + +P +T KQ+ R+V +S+++ HT L +
Sbjct: 370 GMGTNYQLG-----TGQ---EEDAWSPVEMTG-KQLENRMV-LSVSSG---GQHTVLLVK 416
Score = 89 (36.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 26/78 (33%), Positives = 35/78 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVL 116
T IS G VY FG ++ + G GT+ PQ + S KN V+ + G T +
Sbjct: 252 TFAISSEGHVYGFGLSNYHQL--GTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCM 309
Query: 117 SREGRVYTFSWGNDARLG 134
EGR Y+ RLG
Sbjct: 310 DSEGRAYSLGRAEYGRLG 327
Score = 86 (35.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++I VQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVPIPEDI--VQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
Score = 67 (28.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVML 187
Query: 117 SREGRVYTFSWGNDARLGHHTE 138
+ +G +YT G +LG E
Sbjct: 188 TADGELYTLGSGEQGQLGRVPE 209
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 73/293 (24%), Positives = 123/293 (41%)
Query: 67 QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVYT 124
+++ G + G G VQ T P+ ++SL + + G+ VL+ EG V+T
Sbjct: 66 EIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 182
WG++A +LG+ T + + P + L N V+++ S V++
Sbjct: 123 --WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT---SDGEVFAWG 177
Query: 183 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 242
S ++ PR + L N G V WG+ G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
LG GN + P V AL ++ VA G T V++++G VY++G LG
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG------ 290
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
GN+ +N P VT K +R+++I+ +S + +A A T+ G +Y +G
Sbjct: 291 -TGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHTSA---AKTQGGHVYMWG 335
Score = 154 (59.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG+ G +G G+ + +P+ V L + + +A G V + G+VY +
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G + LG GN N TP V +L+ + RV +++ Y AHT LT+
Sbjct: 230 GYNGNGQLG-------LGNS-GNQPTPCRVAALQGI--RVQRVACG---Y--AHTLVLTD 274
Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
G++YA+GA GQLG N++ + P V ++
Sbjct: 275 EGQVYAWGANSYGQLG---TGNKSNQSYPTPVTVE 306
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 57/206 (27%), Positives = 87/206 (42%)
Query: 95 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
++ L N V+Q A G+ + LS +G++ F WG +A +LG E ++ L +L
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQL--FVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 153 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 212
IPV QI SG+ V+ TD P +++ L +
Sbjct: 170 GIPVAQISAGGNHSFVLSL--SGV-VFGWGSNSAGQLGLGDTTDRFVPTIVKS--LSGKK 224
Query: 213 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
+ G V T+G G +G LGH + + E P++V L K V G
Sbjct: 225 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGR 284
Query: 273 YTTFV-VSEDGDVYSFGCGESASLGH 297
+ T V V+ +YSFGCG LG+
Sbjct: 285 HHTLVLVALTNRIYSFGCGMQGQLGN 310
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG G+ VP +V++L+ K + ++ G T +S+ G V++FG
Sbjct: 190 GVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 249
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-S 348
G LGHN++ D H P+LV L +V Q++ HT L +
Sbjct: 250 GGFGQLGHNSLKD---EHH-----PRLVAELW--GSKVSQVTCGRH-----HTLVLVALT 294
Query: 349 GKLYAFGAGDKGQLG 363
++Y+FG G +GQLG
Sbjct: 295 NRIYSFGCGMQGQLG 309
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 49/199 (24%), Positives = 87/199 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
++ +S+ GQ++ +G+++ G+ G++ + L+ SPQ ++SL I V Q + G + VLS
Sbjct: 130 SVALSNDGQLFVWGENAHGQL--GLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLS 187
Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
G V F WG+++ +LG + P ++ +L V I G
Sbjct: 188 LSGVV--FGWGSNSAGQLGLGDTTDRFVP-TIVKSLSGKKTVSISCGGEHTATLS---KG 241
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
V++ S DE HPRL+ + + R+ ++
Sbjct: 242 GTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVA-LTNRIYSF 300
Query: 236 GWGRYGCLGHGNEECESVP 254
G G G LG+G + +SVP
Sbjct: 301 GCGMQGQLGNGEQVKQSVP 319
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/135 (34%), Positives = 67/135 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG G+ + VP +V++L K + ++ G T +S+ G V++FG
Sbjct: 187 GVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGS 246
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G LGHN++ D H P+L+ L +V Q++ HT ES
Sbjct: 247 GGFGQLGHNSLKD---EHH-----PRLIAELW--GSKVSQVTCGRH-----HTLVFEESS 291
Query: 350 KL-YAFGAGDKGQLG 363
KL Y+FG G +GQLG
Sbjct: 292 KLIYSFGCGMQGQLG 306
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 52/204 (25%), Positives = 83/204 (40%)
Query: 95 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
++SL+N V+Q A G+ + LS +G+++ + +LG E + L +L I
Sbjct: 109 LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEI 168
Query: 155 PVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPX 214
PV QI SG+ V+ D P +++ L +
Sbjct: 169 PVAQISAGGNHSFVLSL--SGV-VFGWGSNSAGQLGLGDTKDRFVPTIVKS--LCGKKTV 223
Query: 215 XXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
+ G V T+G G +G LGH + + E P+++ L K V G +
Sbjct: 224 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHH 283
Query: 275 TFVVSEDGD-VYSFGCGESASLGH 297
T V E +YSFGCG LG+
Sbjct: 284 TLVFEESSKLIYSFGCGMQGQLGN 307
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 124 (48.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG++ WG G +G ++ +P V + I + G Y + V+ DG++Y+F
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTMDGELYTF 214
Query: 288 GCGESASLG-HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
G E+ LG N + N +PQ V + ERV+Q++ HT LT
Sbjct: 215 GEPENGKLGLPNELL-------MNHRSPQRVLGIP---ERVIQVACGGG-----HTVVLT 259
Query: 347 ESGKLYAFGAGDKGQLGI 364
E +YAFG G GQLG+
Sbjct: 260 EK-VVYAFGLGQFGQLGL 276
Score = 117 (46.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG + T+G G LG NE + P+ V + + + I VA G T V++E VY+
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV-VYA 265
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G+ LG G P+++ +K ++++ IS + HT +T
Sbjct: 266 FGLGQFGQLG-------LGTFLFETSEPKIIERIK--DQKICHISCGEN-----HTALMT 311
Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
E G LY FG G G+LG+ + N
Sbjct: 312 ELGLLYTFGDGRHGKLGLGMEN 333
Score = 84 (34.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T +++ ++Y FG +++G+ G + + P +++LK V AA G T V +
Sbjct: 47 TAIVTGNNKLYMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTD 104
Query: 119 EGRVYTFSWGNDARLG 134
G VY N+ +LG
Sbjct: 105 TGGVYAAGGNNEGQLG 120
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T++ +D G VYA G ++ G+ G + T Q+V + Q + G +A L+
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR-DTFHQIVFFTPADTIKQLSAGANTSAALTE 157
Query: 119 EGRVYTFSWGNDA--RLGHHTEPNDVEPH 145
+G++ F WG+++ ++G + N PH
Sbjct: 158 DGKL--FMWGDNSEGQIGLEDKSNVCIPH 184
Score = 59 (25.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G V+ FGK F E P KN + + G+ TA+++
Sbjct: 7 LVPDTGAVFTFGKTKFAE-----------NIPSKFW-FKNDIPICLSCGDEHTAIVTGNN 54
Query: 121 RVYTFSWGNDARLGHHTEPNDVEP 144
++Y F N +LG ++ ++P
Sbjct: 55 KLYMFGSNNWGQLGLGSKAAIIKP 78
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 117 (46.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P V+ +++A+ V+ G + + ++ E+GDVY+FG G+ LGH + + +G
Sbjct: 831 PGAVRFDCELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDV-NSRG-------C 882
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV +L + +V S N HT L G+++ FG+ KGQLG
Sbjct: 883 PTLVQALPGPSTQVTAGS--N------HTAILLMDGQVFTFGSFSKGQLG 924
Score = 114 (45.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T ++ DG V++F
Sbjct: 857 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAILLMDGQVFTF 915
Query: 288 GCGESASLG 296
G LG
Sbjct: 916 GSFSKGQLG 924
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 30/77 (38%), Positives = 38/77 (49%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y T LVT LK FV Q A+G T VL + G
Sbjct: 552 VISKDGELYMFGKDAI----YS-DSTSLVTD------LKGHFVTQVAMGKAHTCVLMKNG 600
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 601 EVWTFGVNNKGQCGRDT 617
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L++D G ++ G S GE + + P+ + ++ V+ A N ++V+S
Sbjct: 495 LLVADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVIS 554
Query: 118 REGRVYTFSWGNDARLGHHTE-PNDVEPH 145
++G +Y F G DA T D++ H
Sbjct: 555 KDGELYMF--GKDAIYSDSTSLVTDLKGH 581
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 55/206 (26%), Positives = 87/206 (42%)
Query: 95 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
++ L+N V+Q A G+ + L+ +G++ F WG +A +LG E + L +L
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQL--FVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 153 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 212
IPV QI SG+ V+ TD P +++ L +
Sbjct: 168 GIPVAQISAGGNHSFVLSL--SGV-VFGWGSNSAGQLGLGDTTDRFIPTIVKS--LSGKK 222
Query: 213 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
+ G V T+G G +G LGH + + E P++V L K V G
Sbjct: 223 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGR 282
Query: 273 YTTFVVSEDGD-VYSFGCGESASLGH 297
+ T V + + +YSFGCG LG+
Sbjct: 283 HHTLVFEDSSNQIYSFGCGMQGQLGN 308
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG G+ +P +V++L+ K + ++ G T +S+ G V++FG
Sbjct: 188 GVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 247
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G LGHN++ D H P+LV L +V Q++ HT +S
Sbjct: 248 GGFGQLGHNSLKD---EHH-----PRLVAELW--GSKVSQVTCGRH-----HTLVFEDSS 292
Query: 350 -KLYAFGAGDKGQLG 363
++Y+FG G +GQLG
Sbjct: 293 NQIYSFGCGMQGQLG 307
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 48/199 (24%), Positives = 87/199 (43%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+M +++ GQ++ +G+++ G+ G++ + T SPQ ++SL I V Q + G + VLS
Sbjct: 128 SMALTNDGQLFVWGENALGQL--GLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLS 185
Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 175
G V F WG+++ +LG + P ++ +L V I G
Sbjct: 186 LSGVV--FGWGSNSAGQLGLGDTTDRFIP-TIVKSLSGKKTVSISCGGEHTATLS---KG 239
Query: 176 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 235
V++ S DE HPRL+ + + + ++ ++
Sbjct: 240 GTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSN-QIYSF 298
Query: 236 GWGRYGCLGHGNEECESVP 254
G G G LG+G + +SVP
Sbjct: 299 GCGMQGQLGNGEQVKQSVP 317
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 142 (55.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V DV + G T +S+ G VYS
Sbjct: 41 EPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYS 98
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 99 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 143
Query: 347 ESGKLYAFGA 356
+ G+++ +G+
Sbjct: 144 DDGRVFLWGS 153
Score = 122 (48.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 52/170 (30%), Positives = 77/170 (45%)
Query: 228 QDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
+ G+V ++G G LG E E VP V+ L + K + V+ GD T +++DG V+
Sbjct: 92 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTDDGRVF 149
Query: 286 SFG----C--GESASLGHNAIADGQGNRHANVLTPQ--LVTSLKQVNERVV--QISLTNS 335
+G C S LG QG H V ++ L+ + + +V Q+ L
Sbjct: 150 LWGSFRHCLFHTSQRLGWGKEVWRQGLSHLRVSKDNNGVIGLLEPMKKSMVPVQVQLDVP 209
Query: 336 IY----WNAHTFALTESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 379
+ N H LT G LY G G++GQLG EL N+ R ER+
Sbjct: 210 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERL 259
Score = 101 (40.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 59 TMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L
Sbjct: 87 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAAL 142
Query: 117 SREGRVYTFSWGNDARLGHHT 137
+ +GRV F WG+ HT
Sbjct: 143 TDDGRV--FLWGSFRHCLFHT 161
Score = 93 (37.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH-NAIADGQGNRHA--NVLT 313
VQ DV + VA+G+ +++ DGD+Y+ GCGE LG + +G R +L
Sbjct: 202 VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 261
Query: 314 PQLVTSLKQVNER 326
P+ V LK R
Sbjct: 262 PKCVM-LKSRGSR 273
Score = 87 (35.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 40 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 96
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 159
Y+F ++ LG T E P G +E VVQ+
Sbjct: 97 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 132
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 118 (46.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 814 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 865
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 866 GPSTQVTAGS--N------HTAVLLMDGQVFTFGSFSKGQLG 899
Score = 115 (45.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 832 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 890
Query: 288 GCGESASLG 296
G LG
Sbjct: 891 GSFSKGQLG 899
Score = 103 (41.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 527 VISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNG 575
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 576 EVWTFGVNNKGQCGRDT 592
Score = 71 (30.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G ++ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 470 LLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 529
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 530 KDGELYMF--GKDA 541
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 118 (46.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 952
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 953 GPSTQVTAGS--N------HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 115 (45.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 977
Query: 288 GCGESASLG 296
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 103 (41.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 614 VISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNG 662
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 663 EVWTFGVNNKGQCGRDT 679
Score = 71 (30.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G ++ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 557 LLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 616
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 617 KDGELYMF--GKDA 628
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 118 (46.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 952
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 953 GPSTQVTAGS--N------HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 115 (45.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 977
Query: 288 GCGESASLG 296
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 103 (41.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 614 VISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNG 662
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 663 EVWTFGVNNKGQCGRDT 679
Score = 71 (30.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G ++ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 557 LLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 616
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 617 KDGELYMF--GKDA 628
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 118 (46.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 990
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 991 GPSTQVTAGS--N------HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 115 (45.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 957 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 1015
Query: 288 GCGESASLG 296
G LG
Sbjct: 1016 GSFSKGQLG 1024
Score = 103 (41.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 652 VISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNG 700
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 701 EVWTFGVNNKGQCGRDT 717
Score = 71 (30.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G ++ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 595 LLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 654
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 655 KDGELYMF--GKDA 666
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 118 (46.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G P LV +L
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRG-------CPTLVQALP 990
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +V S N HT L G+++ FG+ KGQLG
Sbjct: 991 GPSTQVTAGS--N------HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 115 (45.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 957 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 1015
Query: 288 GCGESASLG 296
G LG
Sbjct: 1016 GSFSKGQLG 1024
Score = 103 (41.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 652 VISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNG 700
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 701 EVWTFGVNNKGQCGRDT 717
Score = 71 (30.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G ++ G S GE + + P+ + ++ VV A N ++V+S
Sbjct: 595 LLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVIS 654
Query: 118 REGRVYTFSWGNDA 131
++G +Y F G DA
Sbjct: 655 KDGELYMF--GKDA 666
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 35/114 (30%), Positives = 55/114 (48%)
Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
E++P ND K +H++ GD T VV+ +G +Y FG + LG G+++
Sbjct: 26 ENIPSKFWFKND-KPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLG-------LGSKNT- 76
Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
V P V +LK ++ ++ HT TE G +YA G +GQLG+
Sbjct: 77 VRKPTCVKALKPEKTKL-------AVCGRNHTLVYTEKGNVYAAGGNSEGQLGL 123
Score = 114 (45.2 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG + T+G G LG E+ ++ VP+ V + + K VA G T V++E G VY+
Sbjct: 210 DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG-VYT 267
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G+ LGH + P+ V L+ + ++ ++ S + A T
Sbjct: 268 FGLGQYGQLGHGTLL-------FKTSVPKSVKHLR--SHKIHNVTCGES---HTAVIADT 315
Query: 347 ESGKLYAFGAGDKGQLGI 364
E+G ++ FG G G+LG+
Sbjct: 316 ENGLMFTFGDGRHGKLGL 333
Score = 101 (40.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+DG++ WG G +G ++ C SVP V V +I + G Y + ++ DG++Y+F
Sbjct: 159 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFITGDGELYTF 216
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G E+ LG + Q N PQ V + E+V +++ HT LTE
Sbjct: 217 GEPENGKLG---LLPEQLK---NSRVPQPVLGIM---EKVNKVACGGE-----HTVVLTE 262
Query: 348 SG 349
+G
Sbjct: 263 TG 264
Score = 89 (36.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T +++ G++Y FG + +G+ G + T V P V++LK A G T V +
Sbjct: 49 TAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRNHTLVYTE 106
Query: 119 EGRVYTFSWGNDARLG 134
+G VY ++ +LG
Sbjct: 107 KGNVYAAGGNSEGQLG 122
Score = 81 (33.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLS 117
T++ ++ G VYA G +S E + G+ T+ T+ L+ N + Q A G++ +A ++
Sbjct: 101 TLVYTEKGNVYAAGGNS--EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 118 REGRVYTFSWGNDA 131
+G++ F WG+++
Sbjct: 159 EDGQL--FVWGDNS 170
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+ ++G V+ FGK +F E P KN V + G+ TAV++ G+
Sbjct: 10 VPESGAVFTFGKSNFAE-----------NIPSKFW-FKNDKPVHISCGDEHTAVVTGNGK 57
Query: 122 VYTFSWGNDARLG 134
+Y F + +LG
Sbjct: 58 LYMFGSNDWGQLG 70
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 122 (48.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G+V + G +G LG HG C +P+ ++ L + K + +A G + G V+
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCV-IPQAIELLRE-KVVSIAAGLRHALAATASGTVF 175
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ N + V + L S H+ +
Sbjct: 176 QWGTG-LASSGRR-LCPGQTLPLFLTAKEPSTVTGLE--NSQAVCV-LAGS----DHSAS 226
Query: 345 LTESGKLYAFGAGDKGQL 362
LT++G+LY +G+ GQL
Sbjct: 227 LTDAGELYVWGSNKHGQL 244
Score = 87 (35.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/110 (30%), Positives = 46/110 (41%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLV 95
TP C+SL T+++++ GQV + G +SFG+ GV G + PQ +
Sbjct: 93 TP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQL--GVPHGPRRCVIPQAI 148
Query: 96 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPNDVEP 144
E L+ VV A G + G V F WG A G P P
Sbjct: 149 ELLREK-VVSIAAGLRHALAATASGTV--FQWGTGLASSGRRLCPGQTLP 195
Score = 87 (35.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P V L + +A+ V G + +++ G++Y +G + L A A +L
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQA---------AFLLL 253
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
PQ + + NE++ + W H A T +GK++ +G D GQLG
Sbjct: 254 PQRIEARCFQNEKIAAVWSG----WT-HLVAQTVTGKVFTWGRADYGQLG 298
Score = 80 (33.2 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 230 GRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
G VC +WGW +G G G E PK V L +HV G
Sbjct: 350 GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCG 392
Score = 74 (31.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+ A ++A+G +S+G+ G + ++++ QL + K+ + + G +AV++ EG
Sbjct: 11 VPTAAALFAWGANSYGQLGLGHK-EDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 122 VYTFSWGNDARLG-HHTE 138
++ D +LG HTE
Sbjct: 70 LFVCGLNKDGQLGLGHTE 87
Score = 63 (27.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+++D G ++ G + G+ G L +P +SL + Q A G FT +L+ G
Sbjct: 63 VVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENG 120
Query: 121 RVYTFSWGNDARLG 134
+V + + +LG
Sbjct: 121 QVLSCGSNSFGQLG 134
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 123 (48.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+ ++ +G +G LG G++ S P V+AL K A G T V +E G VY+ G
Sbjct: 53 NNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAG 112
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
LG + D + ++++ TS +++ Q+S ++ + ALTE
Sbjct: 113 GNNEGQLG---LGDTEERSTFHLIS--FFTSQRKIK----QLSAGSNT-----SAALTED 158
Query: 349 GKLYAFGAGDKGQLGIELVNN 369
G+L+ +G +GQ+G+E V N
Sbjct: 159 GELFMWGDNSEGQIGLENVTN 179
Score = 109 (43.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 40/146 (27%), Positives = 70/146 (47%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+G++ T+G G LG N+ + +P+ V + K + VA G T V++E VY+
Sbjct: 208 EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA-VYT 265
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G+ LG G P+ + +K ++++ I+ + HT +T
Sbjct: 266 FGLGQFGQLG-------LGTFLFETSVPKAIEHIK--DQKISFIACGEN-----HTALIT 311
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
+ G +Y FG G G+LG+ L N+ +
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQ 337
Score = 96 (38.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T +++ ++Y FG +++G+ G + T V+ P V++LK V AA G T V +
Sbjct: 47 TAVVTGNNKLYMFGSNNWGQLGLGSKST--VSKPTCVKALKPEKVKFAACGRNHTLVSTE 104
Query: 119 EGRVYTFSWGNDARLG 134
G+VY N+ +LG
Sbjct: 105 GGKVYAAGGNNEGQLG 120
Score = 72 (30.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 43/154 (27%), Positives = 66/154 (42%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G+V G G LG G+ E S ++ + I + T +
Sbjct: 104 EGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED----- 158
Query: 288 GCGESASLGHNAIADGQ-GNRHA-NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
GE G N+ +GQ G + NV PQ VT V + + IS Y+++ F
Sbjct: 159 --GELFMWGDNS--EGQIGLENVTNVCVPQQVT----VGKPISWISCG---YYHS-AFVT 206
Query: 346 TESGKLYAFGAGDKGQLGIE---LVNNQTERGNP 376
TE G+LY FG + G+LG+ LVN++ + P
Sbjct: 207 TE-GQLYTFGEPECGKLGLPNQLLVNHRMPQPVP 239
Score = 62 (26.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/74 (24%), Positives = 42/74 (56%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLS 117
T++ ++ G+VYA G ++ E + G+ T+ ++ L+ + + Q + G+ +A L+
Sbjct: 99 TLVSTEGGKVYAAGGNN--EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 118 REGRVYTFSWGNDA 131
+G + F WG+++
Sbjct: 157 EDGEL--FMWGDNS 168
Score = 40 (19.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 65 AGQVYAFGKDSFGE 78
+G V+ FGK F E
Sbjct: 11 SGAVFTFGKTQFAE 24
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS-L 295
WGR G + G++ P V LN + ++ G T V+S+ GD+YS+G S+ L
Sbjct: 15 WGR-G-VNQGDKHIIE-PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQL 71
Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
GH + Q + N+ L+ +L + V+Q+S T + TF LT+ G +Y +G
Sbjct: 72 GHGD-SKNQYGKPKNIKKFSLIKALS--GDSVIQVS-TGLDF----TFVLTDQGSIYNWG 123
Query: 356 AGDKGQLGIELVNNQTERGN 375
+ +GQL + N+ E+ N
Sbjct: 124 SNIEGQLALGQPVNKNEKEN 143
Score = 113 (44.8 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD--GQGNRHANVLTPQLV 317
+N +K I ++ G +S+ VYS+G E LGH Q R N +P+ +
Sbjct: 366 MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWIN--SPKKI 423
Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
SL++ V+ +S S Y +H ALT + +G G GQLG
Sbjct: 424 KSLQEKGVTVISVS---SGY--SHCMALTLDSGILTWGKGSDGQLG 464
Score = 101 (40.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/134 (28%), Positives = 62/134 (46%)
Query: 232 VCTWGWGRYGCLGHG--------NEECESVPKVVQALND--VKAIHVATGDYTTFVVSED 281
V +WG +G LGHG N + PK +++L + V I V++G ++ D
Sbjct: 390 VYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLD 449
Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
+ ++G G LG G RH ++ +P + + NE++VQI Y+N+
Sbjct: 450 SGILTWGKGSDGQLG-------TGFRH-DIWSPFEIKRVIDKNEKIVQICCG---YFNSF 498
Query: 342 TFALTESGKLYAFG 355
F E +LY FG
Sbjct: 499 -FITLEKRELYQFG 511
Score = 92 (37.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 59 TMLISDAGQVYAFGK-DSFGEAEYGVQGT-----KLVTSPQLVESLKNIFVVQAAIGNFF 112
T+++SD+G +Y++G +S G+ +G K + L+++L V+Q + G F
Sbjct: 50 TLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDF 109
Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 143
T VL+ +G +Y +WG++ LG N+ E
Sbjct: 110 TFVLTDQGSIY--NWGSNIEGQLALGQPVNKNEKE 142
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 28/88 (31%), Positives = 43/88 (48%)
Query: 82 GV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---ARLGH-- 135
GV QG K + P V L +VQ + G+ T VLS G +Y SWG+ +LGH
Sbjct: 18 GVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLY--SWGSSNSSGQLGHGD 75
Query: 136 ----HTEPNDVEPHPLLGTLENIPVVQI 159
+ +P +++ L+ L V+Q+
Sbjct: 76 SKNQYGKPKNIKKFSLIKALSGDSVIQV 103
Score = 72 (30.4 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 373
+ R+ QIS S Y +HT L E+G+ + G G+ GQLGI L ++ ++
Sbjct: 563 SNRIKQIS---SGY--SHTLILNENGECLSIGQGEFGQLGIPLDHSSIDK 607
Score = 67 (28.6 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 229 DGRVCTWGWGRYGCLGHG-NEECESVPKVVQALN-DVKAIHVATGDYTTFVVS-EDGDVY 285
D + TWG G G LG G + S ++ + ++ + K + + G + +F ++ E ++Y
Sbjct: 449 DSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELY 508
Query: 286 SFG 288
FG
Sbjct: 509 QFG 511
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 47/135 (34%), Positives = 65/135 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V WG G LG G+ VP VV +L K + ++ G T +++ G V++FG
Sbjct: 190 GVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGS 249
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G LGHN+ D H P+LV L +V Q++ + HT T S
Sbjct: 250 GGFGQLGHNSFKD---EHH-----PRLVAELW--GSKVSQVTCGRN-----HTLVSTASP 294
Query: 350 KL-YAFGAGDKGQLG 363
KL Y+FG G +GQLG
Sbjct: 295 KLIYSFGCGMQGQLG 309
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 55/206 (26%), Positives = 84/206 (40%)
Query: 95 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
++ L+N V+Q A G+ + L+ +G++ F WG +A +LG E + L +L
Sbjct: 112 LKGLENRQVIQIACGDQHSMALTNDGQL--FVWGENALGQLGLRKEQAGTQSPRHLQSLC 169
Query: 153 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 212
IPV QI SG+ V+ TD P ++ + +
Sbjct: 170 GIPVAQISAGGNHSFVLSL--SGV-VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIV 226
Query: 213 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
G G V T+G G +G LGH + + E P++V L K V G
Sbjct: 227 SISCGGEHTAALAKG--GTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGR 284
Query: 273 YTTFVVSEDGD-VYSFGCGESASLGH 297
T V + +YSFGCG LG+
Sbjct: 285 NHTLVSTASPKLIYSFGCGMQGQLGN 310
Score = 137 (53.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 43/136 (31%), Positives = 67/136 (49%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG++ WG G LG E+ + P+ +Q+L + ++ G +FV+S G V+ +
Sbjct: 136 DGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGW 195
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G SA G + D P +V SLK+ +++V IS HT AL +
Sbjct: 196 G-GNSA--GQLGLGDTTDR-----FVPTVVNSLKR--KKIVSISCGGE-----HTAALAK 240
Query: 348 SGKLYAFGAGDKGQLG 363
G ++ FG+G GQLG
Sbjct: 241 GGTVFTFGSGGFGQLG 256
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 43/154 (27%), Positives = 68/154 (44%)
Query: 30 LGREVNGT--PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
L +E GT P + +SL + ++S +G V+ +G +S G+ G +
Sbjct: 152 LRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR 211
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP- 146
V P +V SLK +V + G TA L++ G V+TF G +LGH++ + E HP
Sbjct: 212 FV--PTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKD--EHHPR 267
Query: 147 LLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 180
L+ L V Q+ P +YS
Sbjct: 268 LVAELWGSKVSQVTCGRNHTLVSTASPK--LIYS 299
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 154 (59.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
+G LGHG+ PK V+ L V+ G T ++++G +YSFG LG N
Sbjct: 385 HGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQ 444
Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
A + VL P LV +NE V Q+S +S H ALT S +Y++G G+
Sbjct: 445 SAGSE------VLEPLLVDFF--LNEPVDQVSCGDS-----HIMALTRSKSVYSWGCGEY 491
Query: 360 GQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + +P++V++
Sbjct: 492 GRLGLD---SEDDVYSPQKVEV 510
Score = 136 (52.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +E+ P+ V+ + ++V G +F+++ G V + G E
Sbjct: 483 VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNE 542
Query: 292 SASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P +T KQ++ ++ S++ HT A+ E G
Sbjct: 543 HNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIR-SISPG---RTHTAAIDERG 598
Query: 350 KLYAFGAGDKGQLGI 364
+L FG+ GQLG+
Sbjct: 599 RLLTFGSNKCGQLGV 613
Score = 107 (42.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+ I+D GQ+Y+FG D +G V P LV+ N V Q + G+ L+R
Sbjct: 420 TVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTR 479
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEP 144
VY++ G RLG +E + P
Sbjct: 480 SKSVYSWGCGEYGRLGLDSEDDVYSP 505
Score = 63 (27.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG G+ + + L + I V+ GD T + D ++++G
Sbjct: 598 GRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWG 657
Query: 289 CGESASLGHNAIADGQGN 306
G + L QG+
Sbjct: 658 NGGNGRLAMTPNERPQGS 675
Score = 58 (25.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 33/147 (22%), Positives = 63/147 (42%)
Query: 236 GWGRY--GCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G +Y G + H E + VP + + L+ K ++ G T + E G + +FG
Sbjct: 547 GLNQYTAGIINH--EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFG 604
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
+ LG + D + + N+L L ++V+++S + T A T
Sbjct: 605 SNKCGQLG---VGDYRKHLGINLLGGPLG------GKQVIRVSCGDEF-----TTAATAD 650
Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGN 375
++A+G G G+L + N+ +G+
Sbjct: 651 NHIFAWGNGGNGRLA--MTPNERPQGS 675
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 121 (47.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P V+ +++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + +G+
Sbjct: 916 PGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGS------- 967
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P LV +L + +V S N HT L G+++ FG+ KGQLG
Sbjct: 968 PTLVQALPGPSTQVTAGS--N------HTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 114 (45.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 942 ENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 1000
Query: 288 GCGESASLG 296
G LG
Sbjct: 1001 GSFSKGQLG 1009
Score = 94 (38.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+++ G++Y FGKD+ Y S V LK FV Q A+G T VL++ G
Sbjct: 643 IVTKDGELYMFGKDAI----YS-------DSTCQVSDLKGHFVTQVAMGKAHTCVLTKSG 691
Query: 121 RVYTFSWGNDARLGHHT 137
V+TF N + G T
Sbjct: 692 EVWTFGVNNKGQCGRDT 708
Score = 68 (29.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G V+ G S GE + + P+ + L+ V A N +++++
Sbjct: 586 LLVAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSIVT 645
Query: 118 REGRVYTFSWGNDARLGHHT-EPNDVEPH 145
++G +Y F G DA T + +D++ H
Sbjct: 646 KDGELYMF--GKDAIYSDSTCQVSDLKGH 672
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 141 (54.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/159 (32%), Positives = 77/159 (48%)
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG-- 296
R+G LGHG+ E E P++V+AL V VA G + + VS+ GD+Y +G ES LG
Sbjct: 9 RHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLP 68
Query: 297 HNAIADGQ------GNRHANVLTP-----QLVTSLKQVNERVVQISLTNSIY----WNAH 341
A+A+ Q G + L P S+ Q ++ + L ++ + H
Sbjct: 69 SRAVAEEQAEDEDMGAGPEDPLLPGEPPGAAFISI-QAFPALLDLPLEPAVAAVSCGSRH 127
Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
T ALT G+L +G G GQLG ++ +P RV+
Sbjct: 128 TAALTRGGELNTWGWGKYGQLGH---GDRASCDHPRRVE 163
Score = 104 (41.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 230 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQAL--NDVKAIHVATGDYTTFV-VSEDGD 283
G + TWGWG+YG LGHG+ C+ P+ V+ L ++A V G + T+V V + G+
Sbjct: 135 GELNTWGWGKYGQLGHGDRASCDH-PRRVEQLWAEGLRAQEVVCGPWNTYVCVLQQGE 191
Score = 69 (29.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
P+LVE+L + + A G + +A +S G +Y + W +LG
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 138 (53.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+G G GCLGHGN S P +V+AL + + VA G +S DG+++++G
Sbjct: 416 GIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGR 475
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LG G R ++ Q+ + Q +RVV + +S+ LT G
Sbjct: 476 GDGGRLG-------LGTRESHNCPQQVPVAPGQEAQRVV-CGIDSSMI-------LTSPG 520
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
++ A G+ +LG++ ++ E ++V+ LS
Sbjct: 521 RVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALS 555
Score = 125 (49.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
V + ++ + V HVA GD T +++ G + +FG G + LGH + D +
Sbjct: 387 VSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTD--------IS 438
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P +V +L + +VQ++ S H AL+ G+L+A+G GD G+LG+
Sbjct: 439 QPTIVEAL--LGYEMVQVACGAS-----HVLALSTDGELFAWGRGDGGRLGL 483
Score = 123 (48.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 48/175 (27%), Positives = 70/175 (40%)
Query: 195 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 254
TD P ++E LL + DG + WG G G LG G E + P
Sbjct: 435 TDISQPTIVEA--LLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCP 492
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAIADG----QGNRH 308
+ V +A V G ++ +++ G V + G LG H ++ + Q
Sbjct: 493 QQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEE 552
Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
A TP L Q E ++ + L AH+ A+T SG Y FG+ GQLG
Sbjct: 553 ALSFTPLGSAPLDQ--EPLLCVDLGT-----AHSAAITASGDCYTFGSNQHGQLG 600
Score = 108 (43.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G T+G ++G LG + P VQ L +K + VA GD T V +G+VYS+G
Sbjct: 586 GDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGK 645
Query: 290 GESASLG 296
G LG
Sbjct: 646 GTRGRLG 652
Score = 89 (36.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG--NLTDISQPTIVEALLGYEMVQVACGASHVLALST 466
Query: 119 EGRVYTFSWGNDARLG 134
+G ++ + G+ RLG
Sbjct: 467 DGELFAWGRGDGGRLG 482
Score = 74 (31.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + A G+ FTA L+ G + TF G++ LGH D+ ++ L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNL-TDISQPTIVEALL 447
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 448 GYEMVQV 454
Score = 41 (19.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 89 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++SP + L N VVQ A G A ++R GR+
Sbjct: 327 LSSPLRLPML-NTEVVQVAAGRTQKAGVTRSGRL 359
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 66/273 (24%), Positives = 98/273 (35%)
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGT--LENI 154
+ N VVQ A G A ++R GR+ + G P VE P P + LE
Sbjct: 335 MPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQ 394
Query: 155 PVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPX 214
V I + + S TD P ++E LL +
Sbjct: 395 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA--LLGYEMV 452
Query: 215 XXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
DG + WG G G LG G E + P+ V + +A V G
Sbjct: 453 QVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDC 512
Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQV---NERVVQI 330
+ +++ G V + G LG + ++ + + H V T L E ++ +
Sbjct: 513 SMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCV 572
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L AH+ A+T SG Y FG+ GQLG
Sbjct: 573 DLGT-----AHSAAVTASGACYTFGSNQHGQLG 600
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 44/155 (28%), Positives = 76/155 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+G G GCLGHG+ S P +V+AL + + VA G +S DG+++++G
Sbjct: 416 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGR 475
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LG G R ++ Q+ Q +RVV + S+ LT G
Sbjct: 476 GDGGRLG-------LGTRESHNCPQQVPMVPGQEAQRVV-CGIDCSMI-------LTSPG 520
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
++ A G+ +LG++ ++ + E ++V+ LS
Sbjct: 521 RVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALS 555
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 34/112 (30%), Positives = 59/112 (52%)
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
V + ++ + V HVA GD T +++ G + +FG G + LGH ++ D +
Sbjct: 387 VSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTD--------IS 438
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P +V +L + +VQ++ S H AL+ G+L+A+G GD G+LG+
Sbjct: 439 QPTIVEAL--LGYEMVQVACGAS-----HVLALSADGELFAWGRGDGGRLGL 483
Score = 108 (43.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G T+G ++G LG + P VQ L +K + VA GD T + +G+VYS+G
Sbjct: 586 GACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGK 645
Query: 290 GESASLG 296
G LG
Sbjct: 646 GARGRLG 652
Score = 89 (36.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG--SLTDISQPTIVEALLGYEMVQVACGASHVLALSA 466
Query: 119 EGRVYTFSWGNDARLG 134
+G ++ + G+ RLG
Sbjct: 467 DGELFAWGRGDGGRLG 482
Score = 75 (31.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + A G+ FTA L+ G + TF G++ LGH + D+ ++ L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-TDISQPTIVEALL 447
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 448 GYEMVQV 454
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 139 (54.0 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG++ PK V+ L KAI V+ GD T V+++G +Y+FG +G +
Sbjct: 420 HGQLGHGDKASYRQPKHVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVD 478
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
+A A VL P + ++ V Q+S ++ H LT + ++Y++G G+
Sbjct: 479 KVAG------AEVLEPMQLDFF--LSNPVEQVSCGDN-----HVVVLTRNKEVYSWGCGE 525
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P++VD+
Sbjct: 526 YGRLGLD---SEEDYYTPQKVDV 545
Score = 137 (53.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 43/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 518 VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 577
Query: 292 SASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P T KQ++ ++ HT AL E G
Sbjct: 578 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGK----THTAALDERG 633
Query: 350 KLYAFGAGDKGQLGI 364
+L FG GQLG+
Sbjct: 634 RLLTFGCNKCGQLGV 648
Score = 111 (44.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/140 (30%), Positives = 64/140 (45%)
Query: 229 DGRVCTWGWGRYGCLG----HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+G++ +G YGC+G G E E + N V+ V+ GD V++ + +V
Sbjct: 461 EGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVE--QVSCGDNHVVVLTRNKEV 518
Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
YS+GCGE LG ++ D TPQ V K + VQ TF
Sbjct: 519 YSWGCGEYGRLGLDSEED--------YYTPQKVDVPKALIIVAVQCGCDG-------TFL 563
Query: 345 LTESGKLYAFGAGDKGQLGI 364
LT+SGK+ A G + +LG+
Sbjct: 564 LTQSGKVLACGLNEFNKLGL 583
Score = 106 (42.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D GQ+YAFG D +G V G +++ QL L N V Q + G+ VL+
Sbjct: 455 TVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNP-VEQVSCGDNHVVVLT 513
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEP 144
R VY++ G RLG +E + P
Sbjct: 514 RNKEVYSWGCGEYGRLGLDSEEDYYTP 540
Score = 74 (31.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 633 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 692
Query: 289 CGESASL 295
G + L
Sbjct: 693 NGGNGRL 699
Score = 65 (27.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 607 LAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGP 663
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
L ++V+++S + T A T+ ++A+G G G+L + TER
Sbjct: 664 LG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM----TPTER-- 706
Query: 376 PERVDI 381
P DI
Sbjct: 707 PHGSDI 712
Score = 61 (26.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
P+ VE L+ + Q + G+ FT ++ EG++Y F G+D
Sbjct: 434 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAF--GSD 470
Score = 43 (20.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++ +K+ Q GN AV++ E +YT W N
Sbjct: 374 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 412
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/135 (24%), Positives = 65/135 (48%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
++ + G+ + G LG N +VP V L+ I + G+ + ++E GD+Y +G
Sbjct: 94 KIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSS 153
Query: 291 ESASLGHNAI-ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG+ + A +L P L+ ++ + + TN + HT A++ +G
Sbjct: 154 AYGQLGNGKMNAKLHSFTPTTILNP-LIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTG 212
Query: 350 KLYAFGAGDKGQLGI 364
++++G+ GQLG+
Sbjct: 213 AIFSWGSNQYGQLGL 227
Score = 132 (51.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G + WG +YG LG G+ +SVPK V+ +L VK +A G+ T +++++ DV++F
Sbjct: 288 EGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTF 347
Query: 288 GCGESASLGHNAIADGQGNR 307
G E LGH +I G NR
Sbjct: 348 GSNEFYQLGHGSI--GGKNR 365
Score = 70 (29.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 19/79 (24%), Positives = 41/79 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+L++ ++++ G + G+ G++ P V++L V++ GN +A ++
Sbjct: 86 TLLLTSEYKIFSMGFNQTGQL--GIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE 143
Query: 119 EGRVYTFSWGNDA--RLGH 135
G +Y WG+ A +LG+
Sbjct: 144 AGDLYC--WGSSAYGQLGN 160
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLVESLK------NIFVVQAAI 108
I++AG +Y +G ++G+ G KL + +P + ++ K N+
Sbjct: 141 ITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICF 200
Query: 109 GNFFTAVLSREGRVYTFSWGND 130
G T +S G + FSWG++
Sbjct: 201 GAQHTIAISTTGAI--FSWGSN 220
Score = 56 (24.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
T+ IS G ++++G + +G+ G KLV P
Sbjct: 205 TIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVP 238
Score = 52 (23.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 83 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
V G K T ++V + VV + G T +L+ E ++++ + +LG +
Sbjct: 59 VMGRKHTTLFKIVWKRR---VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSA 115
Query: 143 EPHPLLGTLENIPVVQI 159
P P+ TL V++I
Sbjct: 116 VPLPV-DTLSKFNVIKI 131
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 114 (45.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 39/141 (27%), Positives = 69/141 (48%)
Query: 229 DGRVCTWGWGRY----GCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
+G+V +GWG + G LG + ++ PK++ L +K H+ GD +++ G
Sbjct: 249 EGQV--YGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIK--HLVCGDNHVLALNDKGA 304
Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
V S+G G+ LG I + N+ N L P+ K + + + + H+F
Sbjct: 305 VLSWGSGQQNQLGRRII---ERNK-LNGLQPREFGLPKGI------VHIGAGAF---HSF 351
Query: 344 ALTESGKLYAFGAGDKGQLGI 364
A+ +SGK++A+G G+ GI
Sbjct: 352 AVHQSGKVFAWGLNSFGETGI 372
Score = 97 (39.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHANVLTPQLVTSLKQV 323
+ VA GD ++F ++++G VY +G S LG +A Q TP+L+ LK++
Sbjct: 234 VEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQ-------TTPKLLPDLKKI 286
Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
V + H AL + G + ++G+G + QLG ++ G
Sbjct: 287 KHLVCG---------DNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNG 328
Score = 77 (32.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 68 VYAFGKDSFGEAEYGVQGTKL-VTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYT 124
VY G+ S GE GV + V P+L L ++ VVQ A+G L+ + +V T
Sbjct: 112 VYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLT 171
Query: 125 FSWG-ND-ARLGHHT 137
WG ND LG T
Sbjct: 172 --WGVNDQGALGRDT 184
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 247 NEECESVP-KVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
+E VP +++ A ND+ V + G+ T +++DG ++S G LG + +
Sbjct: 21 SESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTE 80
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
G + + P TS + +++QIS S HT ++T+ G+++A+G+ + GQL
Sbjct: 81 GSFS-----IYPVSWTS----SAKIIQISAGRS-----HTVSVTDDGRVFAWGSNEHGQL 126
Query: 363 GIELVNNQTERGNPERV 379
G+E + T +G P RV
Sbjct: 127 GME--SKFTWQGTPRRV 141
Score = 102 (41.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 41/149 (27%), Positives = 64/149 (42%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V TWG G LG + ++ + V ++ + + A GD T +++ G +SFG
Sbjct: 209 GAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFG- 267
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
S +LG G G + P V+ L + V +I+ HT A+ + G
Sbjct: 268 --SDALGQC----GFGKKVEKRTNPTAVSDL--IGSHVTRIAAGA-----CHTIAICK-G 313
Query: 350 KLYAFGAGDKGQLGI-ELVNNQTERGNPE 377
Y FG GQLG +++ T R E
Sbjct: 314 APYPFGLNSSGQLGNGKIMTQSTPRKTDE 342
Score = 96 (38.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 59 TMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
T+ ++D G+V+A+G + G E+++ QGT P+ V+ + +I VQ A G+
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGT-----PRRVQEINDI--VQVASGSNHCI 158
Query: 115 VLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
L GRV F WG D R H EP VE L +P+V++
Sbjct: 159 ALDEGGRV--FVWGEQADGRCIHRPEP--VEQ------LSGVPIVRV 195
Score = 67 (28.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+ + G+V+ +G+ + G + + P+ VE L + +V+ G LS G
Sbjct: 160 LDEGGRVFVWGEQADG---------RCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGA 210
Query: 122 VYTFSWGNDARLG 134
V+T+ N LG
Sbjct: 211 VFTWGQNNSGELG 223
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 247 NEECESVP-KVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
+E VP +++ A ND+ V + G+ T +++DG ++S G LG + +
Sbjct: 21 SESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTE 80
Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
G + + P TS + +++QIS S HT ++T+ G+++A+G+ + GQL
Sbjct: 81 GSFS-----IYPVSWTS----SAKIIQISAGRS-----HTVSVTDDGRVFAWGSNEHGQL 126
Query: 363 GIELVNNQTERGNPERV 379
G+E + T +G P RV
Sbjct: 127 GME--SKFTWQGTPRRV 141
Score = 102 (41.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 41/149 (27%), Positives = 64/149 (42%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V TWG G LG + ++ + V ++ + + A GD T +++ G +SFG
Sbjct: 209 GAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFG- 267
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
S +LG G G + P V+ L + V +I+ HT A+ + G
Sbjct: 268 --SDALGQC----GFGKKVEKRTNPTAVSDL--IGSHVTRIAAGA-----CHTIAICK-G 313
Query: 350 KLYAFGAGDKGQLGI-ELVNNQTERGNPE 377
Y FG GQLG +++ T R E
Sbjct: 314 APYPFGLNSSGQLGNGKIMTQSTPRKTDE 342
Score = 96 (38.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 59 TMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
T+ ++D G+V+A+G + G E+++ QGT P+ V+ + +I VQ A G+
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGT-----PRRVQEINDI--VQVASGSNHCI 158
Query: 115 VLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
L GRV F WG D R H EP VE L +P+V++
Sbjct: 159 ALDEGGRV--FVWGEQADGRCIHRPEP--VEQ------LSGVPIVRV 195
Score = 67 (28.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+ + G+V+ +G+ + G + + P+ VE L + +V+ G LS G
Sbjct: 160 LDEGGRVFVWGEQADG---------RCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGA 210
Query: 122 VYTFSWGNDARLG 134
V+T+ N LG
Sbjct: 211 VFTWGQNNSGELG 223
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 109 (43.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G+V + G +G LG HG C VP+ ++ + K + +A G + G V+
Sbjct: 118 KNGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIEVQRE-KVVSIAAGLRHALAATASGLVF 175
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS-----IYWNA 340
+G G AS G + GQ T L + K+ ++ V + L NS + +
Sbjct: 176 QWGTG-LASSGRR-LCPGQ--------TLPLFLTAKEPSK--VTVGLENSQAVCVLAGSG 223
Query: 341 HTFALTESGKLYAFGAGDKGQL 362
H+ +LT++G+LY +G+ GQL
Sbjct: 224 HSASLTDAGELYVWGSNKHGQL 245
Score = 89 (36.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
KV L + +A+ V G + +++ G++Y +G + L A A + P
Sbjct: 205 KVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQA---------AFLPLP 255
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
Q + + + NE+V + W H A TE+GK++ +G D GQLG
Sbjct: 256 QKIEAHRFQNEKVAAVWSG----WT-HLVAQTETGKVFTWGRADYGQLG 299
Score = 75 (31.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 65 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
A ++A+G +S+G+ G + L+ QL E K V + G +A+++ +G ++
Sbjct: 14 ATALFAWGANSYGQLGLGHKEDVLLPQ-QLSEFCKPGCVKRITGGGGHSAIVTDQGSLFV 72
Query: 125 FSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
D +LG HTE DV L +L P+ Q+
Sbjct: 73 CGLNKDGQLGLGHTE--DVLYFTLCKSLLGCPIQQV 106
Score = 75 (31.5 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 30/106 (28%), Positives = 43/106 (40%)
Query: 41 CRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLK 99
C+SL T++++ GQV + G +SFG+ GV G + PQ +E ++
Sbjct: 95 CKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL--GVPHGPRRCVVPQAIE-VQ 151
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPNDVEP 144
VV A G + G V F WG A G P P
Sbjct: 152 REKVVSIAAGLRHALAATASGLV--FQWGTGLASSGRRLCPGQTLP 195
Score = 66 (28.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+++D G ++ G + G+ G+ T+ V L +SL + Q A G FT +L++ G
Sbjct: 63 IVTDQGSLFVCGLNKDGQL--GLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNG 120
Query: 121 RVYTFSWGNDARLG 134
+V + + +LG
Sbjct: 121 QVLSCGSNSFGQLG 134
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 107 (42.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D V++ G +S+G+ V ++ + V +++ VVQ A G + L
Sbjct: 186 SLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFL 245
Query: 117 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +G VY+ WG D + LGH+ + P L G L + V+Q+
Sbjct: 246 TDKGEVYSCGWGADGQTGLGHYNITSS--PTKLGGDLAGVNVIQV 288
Score = 81 (33.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 35/143 (24%), Positives = 59/143 (41%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG + WG Y L + + +VP+ + K A G V++ +G V+ +
Sbjct: 301 DGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVW 360
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
G G G N + + P + L + N + Q+S +H ALT
Sbjct: 361 GYGILGK-GPNLVESAVPE-----MIPPTLFGLTEFNPEI-QVSRIRCGL--SHFAALTN 411
Query: 348 SGKLYAFGAGDKGQLGIELVNNQ 370
G+L+ +G +G LGI + +Q
Sbjct: 412 KGELFVWGKNIRGCLGIGRLEDQ 434
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 107 (42.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 43/169 (25%), Positives = 65/169 (38%)
Query: 196 DEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
D P ++E LL + + + WG G G LG G E S P+
Sbjct: 436 DISQPTIVEA--LLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQ 493
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR-HANVLTP 314
V +A V G ++ +++ G + G LG + ++ G+ H V
Sbjct: 494 QVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEA 553
Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
T L + Q L + AH+ A+T SG Y FG+ GQLG
Sbjct: 554 LNFTPLGSAP--LDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLG 600
Score = 101 (40.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G T+G ++G LG P VQ L +K VA GD T + +G+VYS+G
Sbjct: 586 GDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGK 645
Query: 290 GESASLG 296
G LG
Sbjct: 646 GARGRLG 652
Score = 92 (37.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G G ++ P +VE+L +VQ A G LS
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG--GLNDISQPTIVEALLGYEMVQVACGASHVLALST 466
Query: 119 EGRVYTFSWGNDARLG-----HHTEPNDVEPHP 146
E ++ + G+ RLG H+ P V P P
Sbjct: 467 ERELFAWGRGDGGRLGLGTRESHSCPQQV-PMP 498
Score = 78 (32.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + A G+ FTA L+ G + TF G++ LGH ND+ ++ L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGL-NDISQPTIVEALL 447
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 448 GYEMVQV 454
Score = 75 (31.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
L+ + V G + V+ GD Y+FG + LG NA R + P V
Sbjct: 564 LDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNA-------RRVS-RAPCQVQG 615
Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
L+ + +V +A T A+ G++Y++G G +G+LG
Sbjct: 616 LQGIKIAMVACG-------DAFTVAIGAEGEVYSWGKGARGRLG 652
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 124 (48.7 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+G G GCLGHGN + PK+V+AL + + V+ G V+ + +V+S+G
Sbjct: 417 GIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGR 476
Query: 290 GESASLG 296
G++ LG
Sbjct: 477 GDNGRLG 483
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G VT P++VE+L +VQ + G ++
Sbjct: 410 TTCLTDRGIIMTFGSGSNGCLGHG--NFNDVTQPKIVEALLGYELVQVSCGASHVLAVTN 467
Query: 119 EGRVYTFSWGNDARLGHHTE 138
E V+++ G++ RLG T+
Sbjct: 468 EREVFSWGRGDNGRLGLATQ 487
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+ G+ T+G ++G LG + VP V L + A GD T + +G+VY++
Sbjct: 585 EKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTW 642
Query: 288 GCGESASLG 296
G G LG
Sbjct: 643 GKGARGRLG 651
Score = 87 (35.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV----ESLKNIFVVQAAIGNFFTAV 115
M ++ +G++ + S G E + G PQ + E + + + G+ FT
Sbjct: 353 MGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTC 412
Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
L+ G + TF G++ LGH NDV ++ L +VQ+
Sbjct: 413 LTDRGIIMTFGSGSNGCLGHGNF-NDVTQPKIVEALLGYELVQV 455
Score = 64 (27.6 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
+T + +A T A+ G++Y +G G +G+LG + + G P+ V +D S
Sbjct: 620 ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG----RKEEDFGIPKPVQLDES 668
Score = 58 (25.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 255 KVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
++VQ+ LN K +++ G + V+E G ++FG + LG
Sbjct: 558 QLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLG 601
Score = 41 (19.5 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 89 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
+++P + L N V+Q ++G +++ GR+ T+ G T P VE
Sbjct: 329 ISTPLRLPML-NTEVIQVSLGRTQKMGVTKSGRLITWE-APSVGSGEPTLPGAVE 381
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 96 (38.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D V++ G ++ G+ V ++ + V +++ VVQ G + L
Sbjct: 183 SLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFL 242
Query: 117 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +G VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 243 TDKGEVYSCGWGADGQTGLGHYNITST--PSKLGGDLAGVTVVQV 285
Score = 91 (37.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 36/146 (24%), Positives = 63/146 (43%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG Y L + + +VP+ + K VA G +++E+G V+ +
Sbjct: 298 DGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVW 357
Query: 288 G---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
G G+ +L A+ + + P + L + N V + + +H A
Sbjct: 358 GYGILGKGPNLSETALPE---------MIPPTLFGLTEFNPEVKVSQIRCGL---SHFAA 405
Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQ 370
LT G+L+ +G +G LGI + +Q
Sbjct: 406 LTNKGELFVWGKNIRGCLGIGRLEDQ 431
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLS 117
++ ++D G+VY+ G + G+ G+ + ++P +L L + VVQ A LS
Sbjct: 239 SLFLTDKGEVYSCGWGADGQT--GLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALS 296
Query: 118 REGRVYTFSWGNDARL 133
+G V F WGN L
Sbjct: 297 ADGGV--FGWGNSEYL 310
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 120 (47.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 41/106 (38%), Positives = 57/106 (53%)
Query: 260 LNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
LN ++IH V+ G + +V++ GDVYSFG LG +A ++ AN PQ V
Sbjct: 185 LNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSA------HQLANHSYPQRVE 238
Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
SL V +Q++ HT ALTE +LY FG G+ GQLG+
Sbjct: 239 SLHSV----LQVACGGK-----HTLALTED-ELYCFGGGEFGQLGL 274
Score = 117 (46.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/97 (38%), Positives = 51/97 (52%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYS 286
+DGR+ WG G LG GN+ +PK LN ++IH V+ G + +V++ GDVYS
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPK---ELNMGQSIHWVSCGYRHSALVTDSGDVYS 212
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
FG LG +A ++ AN PQ V SL V
Sbjct: 213 FGESADGRLGLSA------HQLANHSYPQRVESLHSV 243
Score = 78 (32.5 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+++ G+++ FG ++ G+ ++G VT P V+ LK A G T V + +G
Sbjct: 49 VTEQGRLFVFGDNNRGQLGLQIKGP--VTKPVCVKVLKGERAQSVACGTDHTLVSTSQGE 106
Query: 122 VYTFSWGNDARLG 134
+ +D +LG
Sbjct: 107 ILAAGGNSDGQLG 119
Score = 60 (26.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 27/130 (20%), Positives = 57/130 (43%)
Query: 24 NGKRNLLGREVNGT---PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAE 80
+ R LG ++ G P+ + L T++ + G++ A G +S G+
Sbjct: 60 DNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLG 119
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHT 137
G + S Q + + ++ + G+ +A L+ +GR+ F WG+++ +LG
Sbjct: 120 LGHCNDSI--SFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRL--FLWGDNSAGQLGFGN 175
Query: 138 EPNDVEPHPL 147
+ + + P L
Sbjct: 176 DSHALLPKEL 185
Score = 53 (23.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
I D G V+ FGK +K+ + LK+ V + G +A ++ +GR
Sbjct: 7 IPDTGAVFTFGK------------SKIANNVPSRLWLKSDIPVHISCGQSHSAFVTEQGR 54
Query: 122 VYTFSWGNDARLG 134
++ F N +LG
Sbjct: 55 LFVFGDNNRGQLG 67
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 123 (48.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 229 DGRVCTWGWGRYGCLGHGNE-------ECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 280
DG+ +GW +YG LG G+ E ES P ++V +VA G D+T ++ S
Sbjct: 128 DGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVT--NVACGADFTVWLSST 185
Query: 281 DG-DVYSFGCGESASLGHNAIADGQGN-RHANVLT-------PQLVTSLKQVNERVVQIS 331
+G + + G + LGH D + N + ++V P+ + SL E +V+++
Sbjct: 186 EGASILTAGLPQYGQLGHGT--DNEFNMKDSSVRLAYEAQPRPKAIASL--AGETIVKVA 241
Query: 332 L-TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
TN HT A+ ++G +Y +G G G+LG Q + P R+D+
Sbjct: 242 CGTN------HTVAVDKNGYVYTWGFGGYGRLGHR---EQKDEWAPRRIDV 283
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 28/75 (37%), Positives = 36/75 (48%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+GR TWG G LGHG+ P VV L+ K + A G T VVS+DG FG
Sbjct: 76 EGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFG 135
Query: 289 CGESASLGHNAIADG 303
+ LG + +G
Sbjct: 136 WNKYGQLGLGSAKNG 150
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 35/113 (30%), Positives = 46/113 (40%)
Query: 232 VCTWGWGRYGCLGHG--NE------------ECESVPKVVQALNDVKAIHVATGDYTTFV 277
+ T G +YG LGHG NE E + PK + +L + VA G T
Sbjct: 190 ILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVA 249
Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHA------NVLTPQLVTSLKQVN 324
V ++G VY++G G LGH D R NVL P + S N
Sbjct: 250 VDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSAN 302
Score = 87 (35.7 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 28/133 (21%), Positives = 49/133 (36%)
Query: 24 NGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV 83
+ K + EV TPL C + ++ + G +G+ +G
Sbjct: 146 SAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGT 205
Query: 84 QG--------TKLVTS----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
+L P+ + SL +V+ A G T + + G VYT+ +G
Sbjct: 206 DNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYG 265
Query: 132 RLGHHTEPNDVEP 144
RLGH + ++ P
Sbjct: 266 RLGHREQKDEWAP 278
Score = 83 (34.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G+ Y +G++ G+ +G + P +V L +V+AA G T V+S +G+ F
Sbjct: 77 GRCYTWGRNEKGQLGHGDMIQR--DRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGF 134
Query: 126 SWGNDARLGHHTEPN-----DVEPHPL 147
W +LG + N +VE PL
Sbjct: 135 GWNKYGQLGLGSAKNGFVSVEVESTPL 161
Score = 78 (32.5 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 227 GQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
G D +WG +YG LG+G ++ + PK V L + + VA G + V+ + D+
Sbjct: 352 GADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDI 411
Score = 63 (27.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 74 DSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
D G+ + ++G LV SP + L NI V +F L EGR YT+
Sbjct: 31 DIIGKRKGAMEGN-LV-SPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKG 88
Query: 132 RLGH 135
+LGH
Sbjct: 89 QLGH 92
Score = 42 (19.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 279 SEDGDVYSFGCGESA-SLGHNAIADGQGNRHANVLTPQLVT 318
SEDG+ + G +SA G A G+G R +N P + T
Sbjct: 489 SEDGEEAN-GKKQSARGRGRGRGARGRGGRTSNGKAPPVKT 528
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 117 (46.2 bits), Expect = 0.00084, P = 0.00084
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
++ +G Y FG + G+ G ++ +P V+ L+NI + A G+ FT + EG
Sbjct: 585 VTASGDCYTFGSNQHGQL--GTNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGE 642
Query: 122 VYTFSWGNDAR--LGHHTEPNDVEPHPL 147
VY SWG AR LG E + P P+
Sbjct: 643 VY--SWGKGARGRLGRRDEDAGL-PRPV 667
Score = 104 (41.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G T+G ++G LG P VQ L ++K VA GD T V +G+VYS+G
Sbjct: 589 GDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGK 648
Query: 290 GESASLG 296
G LG
Sbjct: 649 GARGRLG 655
Score = 86 (35.3 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 412 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 469
Query: 119 EGRVYTFSWGNDARLG-----HHTEPNDVEPHP 146
E ++ + G+ RLG H+ P V P
Sbjct: 470 ERELFAWGRGDGGRLGLGTRESHSCPQQVSMPP 502
Score = 81 (33.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + A G+ FTA L+ G + TF G++ LGH + ND+ ++ L
Sbjct: 392 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-NDISQPTIVEALL 450
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 451 GYEMVQV 457
Score = 80 (33.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
+ V G + V+ GD Y+FG + LG NA R + P V L+ +
Sbjct: 573 LSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNA-------RRVS-RAPCQVQGLQNIKI 624
Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
+V +A T A+ G++Y++G G +G+LG + G P V +D
Sbjct: 625 AMVACG-------DAFTVAVGAEGEVYSWGKGARGRLG----RRDEDAGLPRPVQLD 670
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 108 (43.1 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D V++ G +S+G+ V ++ + V +++ VVQ A G + L
Sbjct: 192 SLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFL 251
Query: 117 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +G VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 252 TDKGEVYSCGWGADGQTGLGHYNITS--APTKLGGDLAGVNVVQV 294
Score = 77 (32.2 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 35/145 (24%), Positives = 62/145 (42%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVV--QALNDVKAIHVATGDYTTFVVSEDGDVY 285
DG + WG Y L + + +VP+ + + VK A G V++ +G V+
Sbjct: 307 DGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVK--QAACGGTGCAVLNGEGHVF 364
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G G G N + + P + L ++N V + + +H AL
Sbjct: 365 VWGYGILGK-GPNLVETALPE-----MIPPTLFGLTELNPEVRVSRIRCGL---SHFAAL 415
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQ 370
T+ G+L+ +G +G LGI + +Q
Sbjct: 416 TDRGELFVWGKNIRGCLGIGRLEDQ 440
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 235 WGWGRY--GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
W WGR G LGHG+ + PK+++ L + + A G T ++E+G VY+FG +
Sbjct: 145 WSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKL 204
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTNSIYWNAHTFALTESGKL 351
LG QGN+ VL+P + Q N + +V+++ + + G L
Sbjct: 205 GQLG-------QGNQTDAVLSPATI----QYNGQPIVKVACGAEF-----SMIVDCKGNL 248
Query: 352 YAFGAGDKGQLG 363
Y+FG + GQLG
Sbjct: 249 YSFGCPEYGQLG 260
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 228 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
++G V T+G + G LG GN+ + P +Q N + VA G + +V G++YS
Sbjct: 192 ENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 287 FGCGESASLGHNA----IADGQGNRHANVLTPQLVTSL--KQVNERVVQIS--LTNSIYW 338
FGC E LGHN+ IA Q L P+ V K + +V+ + + +
Sbjct: 251 FGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVAC 310
Query: 339 NA-HTFALTESGKLYAFGAGDKGQLG 363
A HT L +++++G G G+LG
Sbjct: 311 GANHTLVLDSQKRVFSWGFGGYGRLG 336
Score = 121 (47.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 16 RPDIINERNGKRNLLGREVNGTPLY-CRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKD 74
R ++ ++ RNL G+ + G Y C S +++I+ G+++++G++
Sbjct: 92 RKEVPKQQAAFRNL-GQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRN 150
Query: 75 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
G+ +G TK + +P+L+E L +V AA G T L+ G VYTF +LG
Sbjct: 151 DKGQLGHG--DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLG 208
Query: 135 HHTEPNDVEPHPLLGTLENIPVVQI 159
+ D P P+V++
Sbjct: 209 QGNQ-TDAVLSPATIQYNGQPIVKV 232
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/94 (28%), Positives = 37/94 (39%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+V A VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 302 NVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE--------MVPRLVKLFD 353
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
QI +FAL+E G L+ +G
Sbjct: 354 FPGRGATQIYCGYQC-----SFALSEMGGLFFWG 382
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 143 (55.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 511 VYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNE 570
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LG N G N P TSL + T S HT ++ E G+L
Sbjct: 571 FNKLGLNQCTSGIINHDTYCEVPY-ATSLTLAKQLSFYKIRTISP-GKTHTASIDERGRL 628
Query: 352 YAFGAGDKGQLGI 364
FG+ GQLG+
Sbjct: 629 LTFGSNKCGQLGV 641
Score = 128 (50.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG+ PK V+ L KAI V+ GD T ++++G +Y+FG +G
Sbjct: 413 HGQLGHGDRASYRQPKHVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIG-- 469
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
I G+ VL P L N V Q+S ++ H LT + ++Y +G G+
Sbjct: 470 -IDKAYGSE---VLEP-LQLDFFLTNP-VEQVSCGDN-----HVAVLTRNREVYTWGCGE 518
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P++VD+
Sbjct: 519 YGRLGLD---SEEDHYTPQKVDV 538
Score = 118 (46.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 43/141 (30%), Positives = 71/141 (50%)
Query: 229 DGRVCTWGWGRYGCLG----HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
+G++ +G YGC+G +G+E E + N V+ V+ GD V++ + +V
Sbjct: 454 EGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVE--QVSCGDNHVAVLTRNREV 511
Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TF 343
Y++GCGE LG ++ D H TPQ V K +N +V S++ TF
Sbjct: 512 YTWGCGEYGRLGLDSEED-----H---YTPQKVDVPKTLN--IV------SVHCGCDGTF 555
Query: 344 ALTESGKLYAFGAGDKGQLGI 364
LT++GK+ A G + +LG+
Sbjct: 556 LLTQTGKVLACGLNEFNKLGL 576
Score = 112 (44.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ I+D GQ+YAFG D +G G++++ QL L N V Q + G+ AVL+
Sbjct: 448 TVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNP-VEQVSCGDNHVAVLT 506
Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEP 144
R VYT+ G RLG +E + P
Sbjct: 507 RNREVYTWGCGEYGRLGLDSEEDHYTP 533
Score = 71 (30.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG G+ + + + L + I V+ GD T ++D ++++G
Sbjct: 626 GRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 685
Query: 289 CGESASL 295
G + L
Sbjct: 686 NGGNGRL 692
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++++K+ Q GN AV++ E +YT W N
Sbjct: 367 STPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 405
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 144 (55.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG++ PK V+ L KAIH V+ GD T V+++G +Y+FG +G +
Sbjct: 401 HGQLGHGDKASYRQPKHVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVD 459
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
++ + VL P + ++ V Q+S ++ H LT + ++Y++G G+
Sbjct: 460 KVSGPE------VLEPMQLNFF--LSNPVEQVSCGDN-----HVVVLTRNKEVYSWGCGE 506
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P+RVD+
Sbjct: 507 YGRLGLD---SEEDYYTPQRVDV 526
Score = 134 (52.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 499 VYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 558
Query: 292 SASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P T KQ++ ++ HT A+ E G
Sbjct: 559 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGK----THTAAIDERG 614
Query: 350 KLYAFGAGDKGQLGI 364
+L FG GQLG+
Sbjct: 615 RLLTFGCNKCGQLGV 629
Score = 117 (46.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAIGNFFT 113
T+ ++D GQ+YAFG D YG G V+ P+++E ++ N F V Q + G+
Sbjct: 436 TVCVTDEGQLYAFGSDY-----YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV 490
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
VL+R VY++ G RLG +E + P
Sbjct: 491 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 521
Score = 74 (31.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 614 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 673
Query: 289 CGESASL 295
G + L
Sbjct: 674 NGGNGRL 680
Score = 67 (28.6 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 588 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGP 644
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
L ++V+++S + T A T+ ++A+G G G+L + TER
Sbjct: 645 LG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM----TPTER-- 687
Query: 376 PERVDI 381
P DI
Sbjct: 688 PHGSDI 693
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++ +K+ Q GN AV++ E +YT W N
Sbjct: 355 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 393
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 144 (55.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG++ PK V+ L KAIH V+ GD T V+++G +Y+FG +G +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVD 461
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
++ + VL P + ++ V Q+S ++ H LT + ++Y++G G+
Sbjct: 462 KVSGPE------VLEPMQLNFF--LSNPVEQVSCGDN-----HVVVLTRNKEVYSWGCGE 508
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P+RVD+
Sbjct: 509 YGRLGLD---SEEDYYTPQRVDV 528
Score = 134 (52.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 42/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 501 VYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 292 SASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P T KQ++ ++ HT A+ E G
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGK----THTAAIDERG 616
Query: 350 KLYAFGAGDKGQLGI 364
+L FG GQLG+
Sbjct: 617 RLLTFGCNKCGQLGV 631
Score = 117 (46.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAIGNFFT 113
T+ ++D GQ+YAFG D YG G V+ P+++E ++ N F V Q + G+
Sbjct: 438 TVCVTDEGQLYAFGSDY-----YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
VL+R VY++ G RLG +E + P
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 74 (31.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 289 CGESASL 295
G + L
Sbjct: 676 NGGNGRL 682
Score = 67 (28.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGP 646
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
L ++V+++S + T A T+ ++A+G G G+L + TER
Sbjct: 647 LG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM----TPTER-- 689
Query: 376 PERVDI 381
P DI
Sbjct: 690 PHGSDI 695
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++ +K+ Q GN AV++ E +YT W N
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 395
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 114 (45.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 522 VWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 581
Query: 292 SASLGHN 298
LGH+
Sbjct: 582 FGQLGHS 588
Score = 82 (33.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+L+++ G+VY SFG + + +L +SP L +L +VV A G+F + ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWRSEPAELCPSSPILENALVGQYVVTVATGSFHSGAVTE 108
Query: 119 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 159
G VY WG ++ G N EP+P+ + E P++ +
Sbjct: 109 SGVVYM--WGENSA-GQCAVANQQYVPEPNPVSISDSETSPLLAV 150
Score = 59 (25.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F + L
Sbjct: 162 TLALSISREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 34/126 (26%), Positives = 65/126 (51%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + +WG+G G LG GN + + P++++ L + + ++V G + + + +VY++G
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGN 517
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LGH GN ++ P+LV L N++V +S + ++ AL G
Sbjct: 518 GKFYKLGH-------GNDDIDIYYPKLVECLNH-NKKVCMLS-----FGCFNSLALNVKG 564
Query: 350 KLYAFG 355
+Y +G
Sbjct: 565 DVYVWG 570
Score = 90 (36.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G +Y++G G G+ K PQL++ L+N ++ G + + VYT
Sbjct: 458 GDIYSWGYG--GNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYT- 514
Query: 126 SWGNDA--RLGHHTEPNDV 142
WGN +LGH + D+
Sbjct: 515 -WGNGKFYKLGHGNDDIDI 532
Score = 85 (35.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/153 (25%), Positives = 63/153 (41%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVY 285
+ G+V T G+ + G LG+G + V LN K I +A G VS+ G VY
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSDVGLVY 828
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQL------------VTSL--KQVNERVVQIS 331
+G + + LG I D H LT + + L K V ++
Sbjct: 829 GWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYDHSACIINKLLDKGNTNGVNNVN 888
Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
N + + ++ E G LY +G + G++G+
Sbjct: 889 NVNGVN-GVNNYSSDECGDLYIWGNAESGKVGL 920
Score = 63 (27.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG------R 121
++ +G +S + G+ + V +P +V + V N+ T VL ++
Sbjct: 41 IFTWGGNSCNQLGLGINN-RFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCS 99
Query: 122 VYTFSWGNDARLGHHTE---PNDVE 143
VY+F GN+ LG+ + PN +E
Sbjct: 100 VYSFGKGNNGLLGYKKKRELPNFLE 124
Score = 60 (26.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
++V KN + + G+ T + G +Y++ + N +G+ T N EP P+
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
L ESGK+Y G G+LG N + + G P ++I
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNI 803
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 59 TMLISDAGQVYAFGKDSFG 77
T+ I G +Y++G ++FG
Sbjct: 361 TLAICTGGVLYSWGYNNFG 379
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 34/126 (26%), Positives = 65/126 (51%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + +WG+G G LG GN + + P++++ L + + ++V G + + + +VY++G
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGN 517
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LGH GN ++ P+LV L N++V +S + ++ AL G
Sbjct: 518 GKFYKLGH-------GNDDIDIYYPKLVECLNH-NKKVCMLS-----FGCFNSLALNVKG 564
Query: 350 KLYAFG 355
+Y +G
Sbjct: 565 DVYVWG 570
Score = 90 (36.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
G +Y++G G G+ K PQL++ L+N ++ G + + VYT
Sbjct: 458 GDIYSWGYG--GNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYT- 514
Query: 126 SWGNDA--RLGHHTEPNDV 142
WGN +LGH + D+
Sbjct: 515 -WGNGKFYKLGHGNDDIDI 532
Score = 85 (35.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/153 (25%), Positives = 63/153 (41%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVY 285
+ G+V T G+ + G LG+G + V LN K I +A G VS+ G VY
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSDVGLVY 828
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQL------------VTSL--KQVNERVVQIS 331
+G + + LG I D H LT + + L K V ++
Sbjct: 829 GWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYDHSACIINKLLDKGNTNGVNNVN 888
Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
N + + ++ E G LY +G + G++G+
Sbjct: 889 NVNGVN-GVNNYSSDECGDLYIWGNAESGKVGL 920
Score = 63 (27.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG------R 121
++ +G +S + G+ + V +P +V + V N+ T VL ++
Sbjct: 41 IFTWGGNSCNQLGLGINN-RFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCS 99
Query: 122 VYTFSWGNDARLGHHTE---PNDVE 143
VY+F GN+ LG+ + PN +E
Sbjct: 100 VYSFGKGNNGLLGYKKKRELPNFLE 124
Score = 60 (26.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
++V KN + + G+ T + G +Y++ + N +G+ T N EP P+
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
L ESGK+Y G G+LG N + + G P ++I
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNI 803
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 59 TMLISDAGQVYAFGKDSFG 77
T+ I G +Y++G ++FG
Sbjct: 361 TLAICTGGVLYSWGYNNFG 379
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 99 (39.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D V++ G +S G+ V ++ + V +++ VVQ G + L
Sbjct: 183 SLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFL 242
Query: 117 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +G VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 243 TDKGEVYSCGWGADGQTGLGHYNITST--PSKLGGDLAGVTVVQV 285
Score = 85 (35.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
DG V WG Y L + + +VP+ + K VA G V++ +G V+ +
Sbjct: 298 DGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVW 357
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVT-SLKQVNERVVQISLTNSIYWNAHTFALT 346
G G I G+G + P+++ +L + E ++ ++ +H ALT
Sbjct: 358 GYG---------IL-GKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALT 407
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
G+L+ +G +G LGI + +Q
Sbjct: 408 NKGELFVWGKNIRGCLGIGRLEDQ 431
Score = 75 (31.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLS 117
++ ++D G+VY+ G + G+ G+ + ++P +L L + VVQ A LS
Sbjct: 239 SLFLTDKGEVYSCGWGADGQT--GLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALS 296
Query: 118 REGRVYTFSWGNDARL 133
+G V F WGN L
Sbjct: 297 ADGGV--FGWGNSEYL 310
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D V++ G +S+G+ V ++ + V +++ VVQ A G + L
Sbjct: 186 SLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFL 245
Query: 117 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+ +G VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 246 TDQGEVYSCGWGADGQTGLGHYNITST--PTKLGGDLAGVNVVQV 288
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVV--QALNDVKAIHVATGDYTTFVVSEDGDVY 285
DG + WG Y L + + +VP+ + + VK A G V++ +G V+
Sbjct: 301 DGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVK--QAACGGTGCAVLNGEGHVF 358
Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
+G G G N + + P + L + N V Q+S +H AL
Sbjct: 359 VWGYGILGK-GPNLLETALPE-----MIPPTLFGLSEFNPGV-QVSRIRCGL--SHFAAL 409
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQ 370
T G+L+ +G +G LGI + +Q
Sbjct: 410 TNRGELFVWGKNIRGCLGIGRLEDQ 434
Score = 47 (21.6 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVP 254
G + WG GCLG G E + P
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFP 437
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 114 (45.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
+ G+V + G +G LG HG +C VP+ ++ L + K + VA G ++ G +
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTDTGSTF 175
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ V ++ S H+ +
Sbjct: 176 QWGTG-LASSGRR-LCPGQNLPLFLTAKEPSRVTGLES---STVVCAVAGS----DHSAS 226
Query: 345 LTESGKLYAFGAGDKGQL 362
LT++G+LY +G GQL
Sbjct: 227 LTDTGELYVWGRNKHGQL 244
Score = 82 (33.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 37/143 (25%), Positives = 57/143 (39%)
Query: 234 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
T+ WG G G C +++P + A + + + V D GE
Sbjct: 174 TFQWGT-GLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGE 232
Query: 292 SASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
G N GQ A L PQ V + +E+V + W H A TE+GK
Sbjct: 233 LYVWGRNK--HGQLASLATFLPLPQRVEAHYFQDEKVTAVWSG----WT-HLVAKTETGK 285
Query: 351 LYAFGAGDKGQLGIELVNNQTER 373
++ +G D GQLG L + + ++
Sbjct: 286 VFTWGRADYGQLGRTLGSPEAQK 308
Score = 75 (31.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+++++ GQV + G ++FG+ GV G + PQ +E L+ V AA G +
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQL--GVPHGPRKCVVPQAIECLREKVVCVAA-GLRHALATT 169
Query: 118 REGRVYTFSWG 128
G TF WG
Sbjct: 170 DTGS--TFQWG 178
Score = 64 (27.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+S A ++A+G +S+G+ G + L+ QL + K+ + G + V++ G
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQ-QLSDFCKSGCIKSVTGGGGHSVVVTDGGG 69
Query: 122 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
++ D +LG HTE +V + L P+ Q+
Sbjct: 70 LFVCGLNKDGQLGLGHTE--EVLRFTICKPLLGCPIRQV 106
Score = 56 (24.8 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
+++++D G ++ G + G+ G+ T+ V + + L + Q A G FT +L+
Sbjct: 61 SVVVTDGGGLFVCGLNKDGQL--GLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTE 118
Query: 119 EGRVYTFSWGNDA 131
+G+V S G++A
Sbjct: 119 KGQV--LSCGSNA 129
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 141 (54.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG++ PK V+ L KAI V+ GD T V+++G +Y+FG +G +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVD 461
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
+A + VL P + +N V Q+S ++ H LT + ++Y++G G+
Sbjct: 462 KVAGPE------VLEPMQLNFF--LNNPVEQVSCGDN-----HVVVLTRNKEVYSWGCGE 508
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P++VD+
Sbjct: 509 YGRLGLD---SEEDYYTPQKVDV 528
Score = 134 (52.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 501 VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 292 SASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P T KQ++ ++ HT A+ E G
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGK----THTAAIDERG 616
Query: 350 KLYAFGAGDKGQLGI 364
+L FG GQLG+
Sbjct: 617 RLLTFGCNKCGQLGV 631
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAIGNFFT 113
T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q + G+
Sbjct: 438 TVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHV 492
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
VL+R VY++ G RLG +E + P
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 74 (31.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 289 CGESASL 295
G + L
Sbjct: 676 NGGNGRL 682
Score = 67 (28.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGP 646
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
L ++V+++S + T A T+ ++A+G G G+L + TER
Sbjct: 647 LG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM----TPTER-- 689
Query: 376 PERVDI 381
P DI
Sbjct: 690 PHGSDI 695
Score = 43 (20.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++ +K+ Q GN AV++ E +YT W N
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 395
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 136 (52.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 41/143 (28%), Positives = 76/143 (53%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG++ PK V+ L KAI V+ GD T V+++G +Y+FG +G +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVD 461
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
+A + VL P + ++ V Q+S ++ H LT + ++Y++G G+
Sbjct: 462 KVAGPE------VLEPMQLNFF--LSNPVEQVSCGDN-----HVVVLTRNKEVYSWGCGE 508
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P++VD+
Sbjct: 509 YGRLGLD---SEEDYYTPQKVDV 528
Score = 135 (52.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 42/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 501 VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 292 SASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P T KQ++ ++ HT A+ E G
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGK----THTAAIDERG 616
Query: 350 KLYAFGAGDKGQLGI 364
+L FG GQLG+
Sbjct: 617 RLLTFGCNKCGQLGV 631
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAIGNFFT 113
T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q + G+
Sbjct: 438 TVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
VL+R VY++ G RLG +E + P
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 74 (31.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 289 CGESASL 295
G + L
Sbjct: 676 NGGNGRL 682
Score = 67 (28.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGP 646
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
L ++V+++S + T A T+ ++A+G G G+L + TER
Sbjct: 647 LG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM----TPTER-- 689
Query: 376 PERVDI 381
P DI
Sbjct: 690 PHGSDI 695
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++ +K+ Q GN AV++ E +YT W N
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 395
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 140 (54.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 42/143 (29%), Positives = 75/143 (52%)
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G LGHG++ PK V+ L KAI V+ GD T V+++G +Y+FG +G +
Sbjct: 422 HGQLGHGDKASYRQPKHVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVD 480
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
+A + VL P + N V Q+S ++ H LT + ++Y++G G+
Sbjct: 481 KVAGPE------VLEPMQLNFFS--NNPVEQVSCGDN-----HVVVLTRNKEVYSWGCGE 527
Query: 359 KGQLGIELVNNQTERGNPERVDI 381
G+LG++ ++ + P++VD+
Sbjct: 528 YGRLGLD---SEEDYYTPQKVDV 547
Score = 135 (52.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 42/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G YG LG +EE P+ V + + V G TF++++ G V + G E
Sbjct: 520 VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 579
Query: 292 SASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N G N A P T KQ++ ++ HT A+ E G
Sbjct: 580 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGK----THTAAIDERG 635
Query: 350 KLYAFGAGDKGQLGI 364
+L FG GQLG+
Sbjct: 636 RLLTFGCNKCGQLGV 650
Score = 116 (45.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAIGNFFT 113
T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q + G+
Sbjct: 457 TVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHV 511
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
VL+R VY++ G RLG +E + P
Sbjct: 512 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 542
Score = 74 (31.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 635 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 694
Query: 289 CGESASL 295
G + L
Sbjct: 695 NGGNGRL 701
Score = 68 (29.0 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
+ + L+ K VA G T + E G + +FGC + LG + + + N+L
Sbjct: 609 LAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGP 665
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
L ++V+++S + T A T+ ++A+G G G+L + TER
Sbjct: 666 LG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM----TPTER-- 708
Query: 376 PERVDI 381
P DI
Sbjct: 709 PHGSDI 714
Score = 43 (20.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
++PQ ++ +K+ Q GN AV++ E +YT W N
Sbjct: 376 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVN 414
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESV------PKVVQAL-NDVKAIHVATGDYTTFVVS 279
G+ V ++G G G LG + + P VV L +D+ +I + G Y + V+
Sbjct: 41 GERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSI--SAGHYHSLAVT 98
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
G+++++G + LG I + +R P+ V L+ VN VQ + + +
Sbjct: 99 SSGEIWAWGRNDEGQLGRIVIDSSRDSRSE----PKRVEGLENVN---VQAAFASGVV-- 149
Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
+ A+ + G L+ +G +GQLG L N E P RV+
Sbjct: 150 --SAAIGDDGSLWVWGRSKRGQLG--LGNGIIEARVPSRVE 186
Score = 107 (42.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
+ +WGW R LG G E ++P+ V+ + V+ G + V+E G+ + +GCG+
Sbjct: 357 ILSWGWNRSRQLGRGKPE--NLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGK 414
Query: 292 SASLGHNAIAD 302
+ LG + +D
Sbjct: 415 NGRLGLGSSSD 425
Score = 98 (39.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 28/106 (26%), Positives = 45/106 (42%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
SR P+ +E + +N+Q G DG + WG + G LG GN E+
Sbjct: 122 SRDSRSEPKRVEGLENVNVQ--AAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEA 179
Query: 253 -VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
VP V+ L + V+ G ++ DG V+ +G +G+
Sbjct: 180 RVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGN 225
Score = 75 (31.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
I D G ++ +G+ G+ G G P VE+L VV+ ++G L+ +G+
Sbjct: 153 IGDDGSLWVWGRSKRGQLGLG-NGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGK 211
Query: 122 VYTFSWGNDARLGH 135
V+ + + D R+G+
Sbjct: 212 VFGWGYVADGRVGN 225
Score = 71 (30.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 17/76 (22%), Positives = 40/76 (52%)
Query: 59 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVL 116
++ ++ +G+++A+G++ G+ + ++ S P+ VE L+N+ V A +A +
Sbjct: 94 SLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAI 153
Query: 117 SREGRVYTFSWGNDAR 132
+G ++ WG R
Sbjct: 154 GDDGSLWV--WGRSKR 167
Score = 61 (26.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
H+ +TE G+ + +G G G+LG+ +++ E
Sbjct: 397 HSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPE 428
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/136 (29%), Positives = 62/136 (45%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFG 288
G+V G G LG G+ + S ++ I ++ G T+ ++ +G++Y+FG
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
ES LG N PQLV ++E+V+Q++ HT LTE
Sbjct: 63 EPESGKLGLPP------KLLVNHKVPQLVPG---ISEKVIQVACGGG-----HTVVLTEK 108
Query: 349 GKLYAFGAGDKGQLGI 364
+Y FG G GQLG+
Sbjct: 109 A-VYTFGLGQFGQLGL 123
Score = 82 (33.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 232 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVS 279
V T+G G++G LG G E S PKV++++ D K HV G+ T +++
Sbjct: 110 VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
Score = 70 (29.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYT 124
GQVYA G ++ E + G+ T ++ L+ + + Q + G+ +A L+ EG +YT
Sbjct: 3 GQVYATGGNN--EGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 125 FSWGNDARLG 134
F +LG
Sbjct: 61 FGEPESGKLG 70
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 103 (41.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+LI+ + FG++ G+ Q KL P ++ +L+ + +VQAA+G T L+
Sbjct: 128 TILINMDRKALGFGRNPSGQLGLS-QDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186
Query: 119 EGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
G VY + G +T N P P+ P+++I
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPI--NYRGPPIIRI 226
Score = 93 (37.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ ++D G VYA G++ G+ GV T + SP + + + +++ G F+ +L
Sbjct: 181 TLFLTDTGTVYACGENKSGQC--GVGNTHANIYSPTPI-NYRGPPIIRIGCGAEFSVILD 237
Query: 118 REGRVYTFSWGNDARLGHHTE 138
+G ++TF +LGH+T+
Sbjct: 238 IKGSLHTFGLPEYGQLGHNTD 258
Score = 79 (32.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFG 288
RV +WG+G +G LGH + E VP++++ + V G + +V+E G ++ FG
Sbjct: 317 RVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFG 376
Score = 58 (25.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 229 DGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
D + WG +G LG G ++ +VPK V L+++K V G +T +V
Sbjct: 414 DDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLV 466
Score = 55 (24.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
V ++ V+ + A G+ T + VYS+G G LGH
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGH 331
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 117 (46.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/143 (29%), Positives = 66/143 (46%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
+ G+V + G +G LG HG +C VP+ ++ L + K + VA G + G V+
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTATGSVF 175
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ N V ++ + H+ +
Sbjct: 176 QWGTG-LASSGRR-LCPGQNLPLFLTAKEPSRVTGLE--NSTAVC-----AVAGSDHSAS 226
Query: 345 LTESGKLYAFGAGDKGQLGIELV 367
LT++G+LY +G GQL V
Sbjct: 227 LTDTGELYVWGRNKHGQLASRAV 249
Score = 63 (27.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 24/100 (24%), Positives = 47/100 (47%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREG 120
+S A ++A+G +S+G+ G+ + V PQ + +++ G +AV++ G
Sbjct: 11 VSAAAVLFAWGANSYGQL--GLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGG 68
Query: 121 RVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
++ D +LG HTE +V + L P+ Q+
Sbjct: 69 DLFVCGLNKDGQLGLGHTE--EVLRFTICKPLRGCPIRQV 106
Score = 60 (26.2 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
+++D G ++ G + G+ G+ T+ V + + L+ + Q A G FT +L+ +G
Sbjct: 63 VVTDGGDLFVCGLNKDGQL--GLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKG 120
Query: 121 RVYTFSWGNDA 131
+V S G++A
Sbjct: 121 QV--LSCGSNA 129
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 115 (45.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 591
Query: 292 SASLGHN 298
LGH+
Sbjct: 592 FGQLGHS 598
Score = 78 (32.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGR 121
SD G+VY SFG + + + S ++ES L +VV A G+F T ++ G
Sbjct: 63 SD-GEVY-----SFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSFHTGAVTDSGV 116
Query: 122 VYTFSWG-NDA-RLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
VY WG N A + +P EP+P+ + E P++ +
Sbjct: 117 VYM--WGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAV 155
Score = 68 (29.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAE-----YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 113
T ++D+G VY +G++S G+ Y + + S L + ++Q A G T
Sbjct: 108 TGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEHT 167
Query: 114 AVLSREGRVYTFSWGNDARLG 134
LS ++ +WG +LG
Sbjct: 168 LALSLSREIW--AWGTGCQLG 186
Score = 58 (25.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F + L
Sbjct: 167 TLALSLSREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 221
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G GR G LGHG+E+
Sbjct: 159 SQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ L+ VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLG 262
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 142 (55.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 41/137 (29%), Positives = 66/137 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFG 288
G++ WG R+G G G+ + + Q D AI +A G + + + DG +++FG
Sbjct: 795 GQLSAWGGNRFGQCGVGHSF--RIANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFG 852
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G LGH G ++N L P V L +V QI+ AHT LT++
Sbjct: 853 WGVWGQLGHG------GRNNSNQLVPTRVNGLIC---KVTQIACGR-----AHTVVLTDT 898
Query: 349 GKLYAFGAGDKGQLGIE 365
G++ G+G GQ+G++
Sbjct: 899 GRVLVCGSGSYGQMGVD 915
Score = 98 (39.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G + TWG G LGHGN+ P V N K ++V+ G+ T ++DG V+++G
Sbjct: 1040 EGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWG 1099
Query: 289 CGESASLG 296
+ G
Sbjct: 1100 KNDFGQCG 1107
Score = 97 (39.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
D + VA G + +++ +G +Y++G G LGH GN++ + P V +
Sbjct: 1021 DGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGH-------GNKNER-MEPHQV--FE 1070
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ V +SL N+ HT A T+ G ++A+G D GQ G+
Sbjct: 1071 PNGAKWVNVSLGNN-----HTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 91 (37.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+++S +GQ+ A+G + FG+ G ++ Q+ I + A G F +A + +
Sbjct: 789 LVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVDGDWPAIEKI--ACGQFHSAFICSD 845
Query: 120 GRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTL 151
G ++TF WG +LGH N + P + G +
Sbjct: 846 GSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI 879
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 98 (39.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P V L + KA+ V G + +++ G+VY +G + H +A N A +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLA----NEAAFLPV 253
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
PQ + + NE+V I W H A TE+GK++ +G D GQLG +L
Sbjct: 254 PQKIEAHCFQNEKVTAIWSG----WT-HLVAQTETGKMFTWGRADYGQLGRKL 301
Score = 78 (32.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/110 (30%), Positives = 45/110 (40%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLV 95
TP C+SL T+++++ GQV + G +SFG+ GV G + PQ +
Sbjct: 93 TP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQL--GVPHGPRRCVVPQAI 148
Query: 96 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPNDVEP 144
E K V AA G + G V F WG A G P P
Sbjct: 149 ELHKEKVVCIAA-GLRHAVAATASGIV--FQWGTGLASCGRRLCPGQTLP 195
Score = 63 (27.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 65 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
A ++A+G +S+G+ G + L+ QL + K V + G +AV++ G ++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQ-QLNDFCKPRSVRRITGGGGHSAVVTDGGDLFV 72
Query: 125 FSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
D +LG HTE D+ +L P+ Q+
Sbjct: 73 CGLNKDGQLGLGHTE--DIPYFTPCKSLFGCPIQQV 106
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 104 (41.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D V++ G +++G+ V ++ + V +++ VVQ G + L
Sbjct: 187 SLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFL 246
Query: 117 SREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
+ +G VY+ WG D + G H + V P L G L + VVQ+
Sbjct: 247 TDKGEVYSCGWGADGQTGLGHYDITSV-PTKLGGDLAGVNVVQV 289
Score = 74 (31.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+G + WG Y L + + +VP+ + K A G V++ +G V+ +
Sbjct: 302 EGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVW 361
Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN-AHTFALT 346
G G G N + V+ P L L + N V +S I+ +H ALT
Sbjct: 362 GYGILGK-GPNLVETA----FPEVIPPTLF-GLTEFNPGV-HVS---HIWCGLSHFAALT 411
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
G+L+ +G +G LGI + +Q
Sbjct: 412 SKGELFVWGKNIRGCLGIGRLEDQ 435
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 97 (39.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G+ G LGHG+ P V++L+ + I ++ G + + ++ VYS+G
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNI 582
Query: 292 SASLGH 297
LGH
Sbjct: 583 FGQLGH 588
Score = 94 (38.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 60 MLISDAGQVYAFGKDSF--GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
+L+++ G+VY+FGK + G E+ SP L +L V+ A G+F ++
Sbjct: 54 LLLTEGGEVYSFGKLPWRSGPEEF------CANSPILENTLLGQHVITVAAGSFHNGAVT 107
Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQI 159
G VY WGN++ + +P EP P+ + E P++ +
Sbjct: 108 EGGVVYM--WGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSV 150
Score = 75 (31.5 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
+G+ + S +V+S+G G+ LGH + L P V SL + V+Q
Sbjct: 509 SGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPR--------LQPLCVKSLD--GKEVIQ 558
Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+S H+ ALT ++Y++G+ GQLG
Sbjct: 559 LSAGGH-----HSLALTAKSQVYSWGSNIFGQLG 587
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 148 (57.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
+G + TWG G G LGHG+ + PK++Q+L V G+ T ++++G VYS+G
Sbjct: 822 NGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWG 881
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
E LG G +H++ P V++L++ N V+QI+ ++ H LT S
Sbjct: 882 ASEYGQLGL-----GDVTQHSS---PMQVSALEKYN--VLQIASGST-----HCAVLTTS 926
Query: 349 GKLYAFGAG 357
++ FG G
Sbjct: 927 KEVLVFGNG 935
Score = 143 (55.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 60/272 (22%), Positives = 111/272 (40%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSRE 119
++++ G VY +G+ + + G + L L+++ VV +IG A +
Sbjct: 763 VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRAN 822
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 179
G + T+ G + +LGH N +EP ++ +L + + Q+ +G VY
Sbjct: 823 GELLTWGVGENGQLGHGDTNNQIEPK-IIQSLTSFWITQVQCGEKHTICLTK--NGK-VY 878
Query: 180 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 239
S T P + + N+ ++ V +G G
Sbjct: 879 SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKE--VLVFGNGA 936
Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
G S+P +V +L + + G Y+T ++E GDVY++G G+ LGH
Sbjct: 937 ----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHG- 989
Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
GN + +P+L+ +L+ N+ + QIS
Sbjct: 990 -----GN--STETSPKLIEALR--NQSIRQIS 1012
Score = 103 (41.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V TWG G+ LGHG E+ PK+++AL + ++ G T +++ G +++ C
Sbjct: 975 GDVYTWGTGQE--LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFT--C 1030
Query: 290 GESASLGHNAIADGQGNRHANV--LTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALT 346
G+ S G G N+ + LT S+ N V T S + + + L
Sbjct: 1031 GKD-SFGQLGQMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTRS-FRDKFCWKLL 1088
Query: 347 ESGKLY 352
E+ + Y
Sbjct: 1089 ETQRTY 1094
Score = 88 (36.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 25 GKRNLLGR-EVNGT--PLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEY 81
G+ LG + N P +SL T+ ++ G+VY++G +G+
Sbjct: 831 GENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQL-- 888
Query: 82 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
G+ +SP V +L+ V+Q A G+ AVL+ V F GN A +G
Sbjct: 889 GLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVF--GNGAAMG 939
Score = 41 (19.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 17 PDIINERNGKRNLLGREVNGT 37
P+ NE KRN LG + + T
Sbjct: 417 PNNTNENKQKRNSLGEQTSIT 437
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 120
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 96 (38.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 28/76 (36%), Positives = 37/76 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ +S GQVY G G +G + T LV P+LVE L Q A T VL+
Sbjct: 189 SVFLSQKGQVYTCGHGPGGRLGHGDEQTCLV--PRLVEGLNGHNCSQVAAAKDHTVVLTE 246
Query: 119 EGRVYTFSWGNDARLG 134
+G VYTF +LG
Sbjct: 247 DGCVYTFGLNIFHQLG 262
Score = 81 (33.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 238 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 292 SAS 294
AS
Sbjct: 372 MAS 374
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 126 (49.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 45/157 (28%), Positives = 74/157 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVAT----GDYTTFVVSEDGDV 284
G+V +WG G G LG GN+ P ++ +N + +AT G + ++ +GDV
Sbjct: 265 GQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDV 324
Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
YSFG LG+ DG + TP+ + S+ Q+ I+ + W H+
Sbjct: 325 YSFGSNLHYKLGYKE-CDGALGFQS---TPKKIPSILQMKS----IACAS---W--HSVF 371
Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
L G++Y G+ G+LG +++ + PERV I
Sbjct: 372 LDLKGRVYTCGSSTNGRLG-RAISSYSSF-YPERVSI 406
Score = 97 (39.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 43/161 (26%), Positives = 77/161 (47%)
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE------SVPKVVQALNDVKAIHVATGDYTTFVVSE 280
G +G V ++G + LG+ +EC+ S PK + ++ +K+I A+ ++ F+ +
Sbjct: 319 GSNGDVYSFGSNLHYKLGY--KECDGALGFQSTPKKIPSILQMKSIACASW-HSVFLDLK 375
Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G VY+ G + LG AI+ +++ ++ + + N + Q + I
Sbjct: 376 -GRVYTCGSSTNGRLGR-AISS-----YSSFYPERVSITNSKTNGTLPQEEVIKQIACGT 428
Query: 341 H-TFALTESGKLYAFGAGDKGQLG-IELVNNQTERGNPERV 379
+ T L+ESG LY++G K QLG I LV P+ V
Sbjct: 429 NFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLV 469
Score = 88 (36.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
++++D G VY+ G S+G+ + + L+ + Q++E L N + A G + +
Sbjct: 207 LILTDTGAVYSSGLCSYGKTGHKKKRDVLIPT-QILE-LSNKRIKSIACGTHHSLAMDDL 264
Query: 120 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 153
G+VY SWGN A RLG + + V P P L ++ N
Sbjct: 265 GQVY--SWGNGASGRLGLGNDFSIV-PTPTLISVIN 297
Score = 80 (33.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 228 QDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
+ G + +WG LG G E S PK+V ALN A GD +S+ G+
Sbjct: 436 ESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGE 495
Query: 284 VYSFGCGESASLGHNAIADGQGN 306
V+ +G + G + + + N
Sbjct: 496 VFCYGDNSTLQCGFGEVLNFEIN 518
Score = 70 (29.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK----NIFVVQAAIGNFFTA 114
++ + D GQVY++G + G G +V +P L+ + N A G +
Sbjct: 258 SLAMDDLGQVYSWGNGASGRLGLG-NDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSM 316
Query: 115 VLSREGRVYTFSWGNDARLGH 135
+L G VY+F +LG+
Sbjct: 317 ILGSNGDVYSFGSNLHYKLGY 337
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
+Q G + +L+ G VY+ + + GH + + + P +L
Sbjct: 197 IQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQIL 241
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 120
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 96 (38.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 28/76 (36%), Positives = 37/76 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ +S GQVY G G +G + T LV P+LVE L Q A T VL+
Sbjct: 189 SVFLSQKGQVYTCGHGPGGRLGHGDEQTCLV--PRLVEGLNGHNCSQVAAAKDHTVVLTE 246
Query: 119 EGRVYTFSWGNDARLG 134
+G VYTF +LG
Sbjct: 247 DGCVYTFGLNIFHQLG 262
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 238 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 292 SAS 294
AS
Sbjct: 372 MAS 374
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 120
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 96 (38.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 28/76 (36%), Positives = 37/76 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ +S GQVY G G +G + T LV P+LVE L Q A T VL+
Sbjct: 189 SVFLSQKGQVYTCGHGPGGRLGHGDEQTCLV--PRLVEGLNGHNCSQVAAAKDHTVVLTE 246
Query: 119 EGRVYTFSWGNDARLG 134
+G VYTF +LG
Sbjct: 247 DGCVYTFGLNIFHQLG 262
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 238 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 292 SAS 294
AS
Sbjct: 372 MAS 374
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 111 (44.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G+V + G +G LG HG C VP+ ++ L+ K + +A G + G V+
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ N + + + L S H+ +
Sbjct: 62 QWGTG-LASCGRR-LCPGQTLPLFFTAKEPSRVTGLE--NSKAMCV-LAGS----DHSAS 112
Query: 345 LTESGKLYAFGAGDKGQLGIE 365
LT++G++Y +G+ GQL E
Sbjct: 113 LTDAGEVYVWGSNKHGQLANE 133
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G+V + G +G LG HG C VP+ ++ L+ K + +A G + G V+
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ N + + + L S H+ +
Sbjct: 62 QWGTG-LASCGRR-LCPGQTLPLFFTAKEPSRVTGLE--NSKAMCV-LAGS----DHSAS 112
Query: 345 LTESGKLYAFGAGDKGQLGIE 365
LT++G++Y +G+ GQL E
Sbjct: 113 LTDAGEVYVWGSNKHGQLANE 133
Score = 98 (39.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P V L + KA+ V G + +++ G+VY +G + H +A N A +
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLA----NEAAFLPV 139
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
PQ + + NE+V I W H A TE+GK++ +G D GQLG +L
Sbjct: 140 PQKIEAHCFQNEKVTAIWSG----WT-HLVAQTETGKMFTWGRADYGQLGRKL 187
Score = 69 (29.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
++++ GQV + G +SFG+ GV G + PQ +E K V AA G +
Sbjct: 1 MLTENGQVLSCGSNSFGQL--GVPHGPRRCVVPQAIELHKEKVVCIAA-GLRHAVAATAS 57
Query: 120 GRVYTFSWGND-ARLGHHTEPNDVEP 144
G V F WG A G P P
Sbjct: 58 GIV--FQWGTGLASCGRRLCPGQTLP 81
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
+ + ++ + V HVA GD+ T +++ G + +FG G + LGH ++ D +
Sbjct: 381 ISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTD--------IS 432
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P +V +L + +VQ++ S H AL+ +L+A+G GD G+LG+
Sbjct: 433 QPTIVEAL--LGYEMVQVACGAS-----HVLALSTERELFAWGRGDSGRLGL 477
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 67/271 (24%), Positives = 98/271 (36%)
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHP--LLGTLENIPV 156
N VVQ A G A ++R GR+ + G P VE P P + LE
Sbjct: 331 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSG 390
Query: 157 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXX 216
V I + + S TD P ++E LL +
Sbjct: 391 VTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA--LLGYEMVQV 448
Query: 217 XXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
+ + WG G G LG G E S P+ V +A V G ++
Sbjct: 449 ACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSM 508
Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGN-RHANV---LTPQLVTSLKQVNERVVQISL 332
+++ G + G LG + ++ G+ H V L+ L+ S E ++ I L
Sbjct: 509 ILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDL 568
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
AH+ A+T SG Y FG+ GQLG
Sbjct: 569 GT-----AHSAAVTASGDCYTFGSNQHGQLG 594
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G + T+G G GCLGHG+ S P +V+AL + + VA G +S + +++++G
Sbjct: 410 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 469
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+S LG G R ++ Q+ Q +RVV + +S+ LT G
Sbjct: 470 GDSGRLG-------LGTRESHSCPQQVPMPPGQEAQRVV-CGIDSSMI-------LTVPG 514
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
+ A G+ +LG++ ++ E ++V+ LS
Sbjct: 515 QALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALS 549
Score = 95 (38.5 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G T+G ++G LG P VQ L +K VA GD T + + +VYS+G
Sbjct: 580 GDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGK 639
Query: 290 GESASLG 296
G LG
Sbjct: 640 GARGRLG 646
Score = 86 (35.3 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 28/93 (30%), Positives = 42/93 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHG--SLTDISQPTIVEALLGYEMVQVACGASHVLALST 460
Query: 119 EGRVYTFSWGNDARLG-----HHTEPNDVEPHP 146
E ++ + G+ RLG H+ P V P P
Sbjct: 461 ERELFAWGRGDSGRLGLGTRESHSCPQQV-PMP 492
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + A G+FFTA L+ G + TF G++ LGH + D+ ++ L
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSL-TDISQPTIVEALL 441
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 442 GYEMVQV 448
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 37/97 (38%), Positives = 50/97 (51%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVV----QALND-VKAIHVATGDYTTFVVSEDGD 283
DG V +WG G +G LG G E E VP +V QA D ++ + VA G Y + VS+DG
Sbjct: 34 DGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGS 93
Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
V+ +G LG DG+ N L P L+ +L
Sbjct: 94 VWCWGYNIYGQLGF----DGE-----NSLAPCLIKNL 121
Score = 102 (41.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 232 VC-TWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGC 289
+C T+G+G G LGH + + S+P+ V L + + V G + T VVS +G V+S+G
Sbjct: 290 ICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGM 349
Query: 290 GESASLGHNA-IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
L + + + + P+ ++ VQ+S AHT + +
Sbjct: 350 ERGLGLCPDVNFTEVEAGDDS---VPRKISGGSSRFRDPVQVSCGA-----AHTVLVVDG 401
Query: 349 G-KLYAFGAGDKGQLG 363
G KL+++G G G LG
Sbjct: 402 GYKLWSWGRGRNGVLG 417
Score = 84 (34.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 34/141 (24%), Positives = 69/141 (48%)
Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV---ATGDYTTFVVSEDGDV------ 284
+WG +G LG G+ E + P+ V+ N + V A G + T +++ +
Sbjct: 231 SWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSI 290
Query: 285 -YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
++FG GE+ LGH + N+ +++ P+ V+ L E +S+ ++ HT
Sbjct: 291 CWTFGFGENGQLGHRS------NKSSSL--PEPVSDLP---EHAYLVSVDCGLF---HTS 336
Query: 344 ALTESGKLYAFGAGDKGQLGI 364
++ G ++++G ++G LG+
Sbjct: 337 VVSSEGYVWSWGM-ERG-LGL 355
Score = 76 (31.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-----IFVVQAAIGNFFT 113
T+ ++ G VY++G+ FG G + +LV P LVE I +V A G + +
Sbjct: 28 TIALTGDGCVYSWGRGMFGRLGTGKESDELV--PVLVEFPNQAEGDRIRIVGVAAGAYHS 85
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
+S +G V+ + + +LG E N + P
Sbjct: 86 LAVSDDGSVWCWGYNIYGQLGFDGE-NSLAP 115
Score = 58 (25.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 91 SPQLV--ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
SP L+ E L ++ A G T L+ +G VY++ G RLG E +++ P
Sbjct: 5 SPTLLISEDLSRK-IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVP 59
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
LY++G GQLG+ + R P+ V+
Sbjct: 229 LYSWGNNHHGQLGL---GDGESRARPQTVE 255
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
V + ++ + V HVA GD T +++ G + +FG G + LGH ++ D +
Sbjct: 389 VSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLND--------IS 440
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P +V +L + +VQ++ S H AL+ +L+A+G GD G+LG+
Sbjct: 441 QPTIVEAL--LGYEMVQVACGAS-----HVLALSTERELFAWGRGDGGRLGL 485
Score = 117 (46.2 bits), Expect = 0.00084, P = 0.00084
Identities = 37/135 (27%), Positives = 56/135 (41%)
Query: 15 LRPDIINERNGKRNLLGREVNGTPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKD 74
L P + E + V TPL L ++L++ +G Y FG +
Sbjct: 537 LDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSN 596
Query: 75 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-- 132
G+ G ++ +P V+ L+ I + A G+ FT + EG V FSWG AR
Sbjct: 597 QHGQL--GTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEV--FSWGKGARGR 652
Query: 133 LGHHTEPNDVEPHPL 147
LG E + P P+
Sbjct: 653 LGRKDEDAGL-PRPV 666
Score = 95 (38.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G T+G ++G LG P VQ L +K VA GD T + +G+V+S+G
Sbjct: 588 GDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGK 647
Query: 290 GESASLG 296
G LG
Sbjct: 648 GARGRLG 654
Score = 86 (35.3 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 411 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 468
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEP 144
E ++ + G+ RLG T + P
Sbjct: 469 ERELFAWGRGDGGRLGLGTRESHCCP 494
Score = 81 (33.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+ +E + + A G+ FTA L+ G + TF G++ LGH + ND+ ++ L
Sbjct: 391 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-NDISQPTIVEALL 449
Query: 153 NIPVVQI 159
+VQ+
Sbjct: 450 GYEMVQV 456
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 138 (53.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 34/104 (32%), Positives = 50/104 (48%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G GR G LGHG+E+
Sbjct: 159 SQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ L+ VA T V+++DG VY+FG LG
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLG 262
Score = 104 (41.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 120
+D +VY +G ++ +G Q +K P+L++ S ++V Q + F + LS++G
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSK--HHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKG 196
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGRGGRLGHGDEQTCLVPRLVEG 225
Score = 70 (29.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 241 GCLGH----GNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY 285
G LGH E+C + P+ V AL+ D+ VA D T V+ GD+Y
Sbjct: 312 GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIY 362
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 98 (39.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P V L + KA+ V G + +++ G+VY +G + H +A N A +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLA----NEAAFLPV 253
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
PQ + + NE+V I W H A TE+GK++ +G D GQLG +L
Sbjct: 254 PQKIEAHCFQNEKVTAIWSG----WT-HLVAQTETGKMFTWGRADYGQLGRKL 301
Score = 80 (33.2 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 230 GRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
G VC +WGW +G G G E PK VQAL + V G
Sbjct: 350 GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 392
Score = 78 (32.5 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 33/110 (30%), Positives = 45/110 (40%)
Query: 37 TPLYCRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLV 95
TP C+SL T+++++ GQV + G +SFG+ GV G + PQ +
Sbjct: 93 TP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQL--GVPHGPRRCVVPQAI 148
Query: 96 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPNDVEP 144
E K V AA G + G V F WG A G P P
Sbjct: 149 ELHKEKVVCIAA-GLRHAVAATASGIV--FQWGTGLASCGRRLCPGQTLP 195
Score = 63 (27.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 65 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
A ++A+G +S+G+ G + L+ QL + K V + G +AV++ G ++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQ-QLNDFCKPRSVRRITGGGGHSAVVTDGGDLFV 72
Query: 125 FSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 159
D +LG HTE D+ +L P+ Q+
Sbjct: 73 CGLNKDGQLGLGHTE--DIPYFTPCKSLFGCPIQQV 106
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 106 (42.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + IH+ G + ++ VYS+G
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 292 SASLGHN 298
LGH+
Sbjct: 582 FGQLGHS 588
Score = 82 (33.9 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 30/105 (28%), Positives = 50/105 (47%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSR 118
+L+++ G+VY SFG + + ++ S L+ES L VV A G+F + ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTE 108
Query: 119 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 159
G VY WG +A G N EP P+ + E P++ +
Sbjct: 109 SGVVYM--WGENAA-GQCAVANQQYVSEPSPVSISDSETSPLLAV 150
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 115 (45.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 292 SASLGHN 298
LGH+
Sbjct: 588 FGQLGHS 594
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+++ G+VY+FG + + +SP L +L +VV A G+F + ++
Sbjct: 54 VLLTEDGEVYSFGTLPWRSGPVEI----CPSSPILENALVGQYVVTVATGSFHSGAVTDN 109
Query: 120 GRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 159
G Y WG ++ G N EP+P+ + E P++ +
Sbjct: 110 GVAYM--WGENSA-GQCAVANQQYVPEPNPVSIADSEASPLLAV 150
Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F + L
Sbjct: 162 TLALSISREIWAWGTG----CQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
TM++++ +++ FG +S G+ +G + +K+ +LVESLK + +GN+F+ +
Sbjct: 479 TMVLTNDNELFGFGDNSCGQLGFG-KFSKMENG-RLVESLKGRDIQSVGVGNYFSVICCD 536
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENI 154
G + TF + LG + + +P L L ENI
Sbjct: 537 RGTLLTFGTAKNLGLGKDAK-DSAKPMLLEQLLRENI 572
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 47/188 (25%), Positives = 71/188 (37%)
Query: 196 DEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
D P L+EQ N++ + G WG +YG LG E P
Sbjct: 557 DSAKPMLLEQLLRENIKDIYCGHDHVVAVL--ESGECLGWGSNQYGQLGLPTLEHFFAPT 614
Query: 256 VVQALNDV---------------KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
V LN+ K ++ G T ++S+DG + + G + L +
Sbjct: 615 KVFFLNEATALYGPFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLN---L 671
Query: 301 ADGQGNRHANVLTPQ-LV---TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
G TP V T L+ ERVV S+ + Y H+ + ESG++ FG
Sbjct: 672 TQRVGFFTKEKKTPNDYVNKPTILQGFPERVVDFSVGS--Y---HSGVILESGQVMIFGR 726
Query: 357 GDKGQLGI 364
D +LG+
Sbjct: 727 NDNTELGL 734
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 115 (45.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 292 SASLGHN 298
LGH+
Sbjct: 588 FGQLGHS 594
Score = 71 (30.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+++ G+VY+FG + + +SP L +L +V+ A G+F + ++
Sbjct: 54 VLLTEDGEVYSFGTLPWRSGPVEI----CPSSPILENALVGQYVITVATGSFHSGAVTDN 109
Query: 120 GRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 159
G Y WG ++ G N EP+P+ + E P++ +
Sbjct: 110 GVAYM--WGENSA-GQCAVANQQYVPEPNPVSIADSEASPLLAV 150
Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVL 116
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F + L
Sbjct: 162 TLALSISREIWAWGTG----CQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 286
DG + WG G LG+G P VQ +N V + +A G + DG +++
Sbjct: 643 DGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLAGRSDGTLWA 700
Query: 287 FGCGESASLG---HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
+G S LG H AD N + + +++TS V+ + T +H+
Sbjct: 701 WGNNTSGQLGTGPHPGDADPL-NPQPHTVPARILTS-NPVSAADDWLVATAG---GSHSA 755
Query: 344 ALTESGKLYAFGAGDKGQLG 363
AL +G L+ +G GQLG
Sbjct: 756 ALKSNGTLWTWGQNTSGQLG 775
Score = 85 (35.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFV---VQAAIGNFFTAVLSREGR 121
G ++++G ++FG+ G GT T+P Q+V F V A G F+ L +G
Sbjct: 524 GTLWSWGDNTFGQLGDGT-GTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGT 582
Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
++T WG+++ L T+P + P T N+P
Sbjct: 583 IWT--WGDNSLLQLGTDPAMLTP----ATQRNVP 610
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 66 GQVYAFGKDSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
G ++++G++ FGE GV G VT+P V + + +V AA G T L R G V
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGAN-VTTPTRVGTGSD-WVAIAA-GALHTVALHRNGTVS 316
Query: 124 TFSWGNDAR--LGHHTEPNDVEP 144
+WGN+A+ +G T N P
Sbjct: 317 --AWGNNAQGAVGDGTVANRSTP 337
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 286
DG + WG G LG+G P VQ +N V + +A G + DG +++
Sbjct: 643 DGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLAGRSDGTLWA 700
Query: 287 FGCGESASLG---HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
+G S LG H AD N + + +++TS V+ + T +H+
Sbjct: 701 WGNNTSGQLGTGPHPGDADPL-NPQPHTVPARILTS-NPVSAADDWLVATAG---GSHSA 755
Query: 344 ALTESGKLYAFGAGDKGQLG 363
AL +G L+ +G GQLG
Sbjct: 756 ALKSNGTLWTWGQNTSGQLG 775
Score = 85 (35.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFV---VQAAIGNFFTAVLSREGR 121
G ++++G ++FG+ G GT T+P Q+V F V A G F+ L +G
Sbjct: 524 GTLWSWGDNTFGQLGDGT-GTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGT 582
Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
++T WG+++ L T+P + P T N+P
Sbjct: 583 IWT--WGDNSLLQLGTDPAMLTP----ATQRNVP 610
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 66 GQVYAFGKDSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
G ++++G++ FGE GV G VT+P V + + +V AA G T L R G V
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGAN-VTTPTRVGTGSD-WVAIAA-GALHTVALHRNGTVS 316
Query: 124 TFSWGNDAR--LGHHTEPNDVEP 144
+WGN+A+ +G T N P
Sbjct: 317 --AWGNNAQGAVGDGTVANRSTP 337
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 106 (42.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + IH+ G + ++ VYS+G
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 292 SASLGHN 298
LGH+
Sbjct: 582 FGQLGHS 588
Score = 78 (32.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSR 118
+L+++ G+VY SFG + + ++ S L+ES L V+ A G+F + ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTE 108
Query: 119 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 159
G VY WG +A G N EP P+ + E P + +
Sbjct: 109 SGVVYM--WGENAA-GQCAVANQQYVPEPSPVSISDSETSPSLAV 150
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ L+ VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 103 (41.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 120
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 238 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G+ G L N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKK 371
Query: 292 SAS 294
AS
Sbjct: 372 LAS 374
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 193 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 252
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
VP++V+ L+ VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 120
+D VY +G ++ +G Q +K P+LV+ S +++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKG 196
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 97 (39.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ +S GQVY G G +G + T LV P+LVE L Q A T VL+
Sbjct: 189 SVFLSQKGQVYTCGHGPGGRLGHGDEQTCLV--PRLVEGLSGHNCSQVAAAKDHTVVLTE 246
Query: 119 EGRVYTFSWGNDARLGHHTEPND 141
+G VYTF +LG P++
Sbjct: 247 DGCVYTFGLNIFHQLGIIPPPSN 269
Score = 71 (30.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 241 GCLGH----GNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G LGH E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLADYQCKK 371
Query: 292 SAS 294
AS
Sbjct: 372 LAS 374
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 100 (40.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 43/188 (22%), Positives = 82/188 (43%)
Query: 201 RLIEQFQLLNLQPXXXXXXXXXXXXXGQ--------DGRVCTWGWGRYGCLGHGNEECES 252
+++E+F+L L P G+ D ++ +WG ++G G +E+ E
Sbjct: 256 KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGV-SEDVED 314
Query: 253 VPKVVQ----ALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLG---HNAIADGQ 304
V + AL D I +A G++ + ++S+DGD+YS G + +G N
Sbjct: 315 GALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTY 374
Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ H L T L V + ++ + H+ A+ ++G Y++G G+ +G+
Sbjct: 375 KDVHGKARAVPLPTKLNNV-PKFKSVAAGSH-----HSVAVAQNGIAYSWGFGETYAVGL 428
Query: 365 ELVNNQTE 372
+ TE
Sbjct: 429 GPFEDDTE 436
Score = 71 (30.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 66 GQVYAFGKDSFGEAEYGV--QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
G+VYA+G E G K+ +P V + +VQ A G L EG V
Sbjct: 184 GEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV- 242
Query: 124 TFSWGN 129
F+WGN
Sbjct: 243 -FAWGN 247
Score = 58 (25.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 23/75 (30%), Positives = 32/75 (42%)
Query: 68 VYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYT 124
++ +G S E G + K V P+L L ++ A+G T L E V+
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVW- 106
Query: 125 FSWG-NDA-RLGHHT 137
SWG ND LG T
Sbjct: 107 -SWGCNDVGALGRDT 120
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 119 (46.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V +WG G+ G LGHG+ P V++LN + + VA G + + ++ V+S+GC
Sbjct: 551 VWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNT 610
Query: 292 SASLGH 297
S LGH
Sbjct: 611 SGQLGH 616
Score = 62 (26.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/99 (30%), Positives = 44/99 (44%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
+L+ + GQVY SFGE + T P L L VV A G+ + V++ +
Sbjct: 51 VLLVEGGQVY-----SFGELPWKQNQTSSA-EPILEAVLSEQRVVFVAAGSAHSGVVTED 104
Query: 120 GRVYTFSWGNDAR-----LGHHTEPNDVEPHPLLGTLEN 153
G V+ WG + LG PN P P+ G L++
Sbjct: 105 GGVHM--WGENVHGQCGLLGLSVIPN---PTPV-GVLDS 137
Score = 50 (22.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 74 DSFGEAE--YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
DS GE + +G T+P+ V L + V+QAA+G +L G+VY+F
Sbjct: 11 DSSGERGLLHTWKGYSYSTAPERV--LLSRPVLQAALGARHGVLLVEGGQVYSF 62
Score = 50 (22.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
T+ +S +V+A+G + G+ T V PQ V+ L V+Q A G+ + L
Sbjct: 157 TLALSAKHEVWAWGSG----CQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVALV 212
Query: 118 R 118
R
Sbjct: 213 R 213
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 50/171 (29%), Positives = 76/171 (44%)
Query: 199 HPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
HP L++ F ++ G++ T G G+ G LGHG+E+ VP++V+
Sbjct: 168 HPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVE 227
Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
L+ + +A T V++EDG VY+FG LG I AN P+ V
Sbjct: 228 GLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLG---ILPPP----ANCSVPRQVQ 280
Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
+ K + R+V I + + HT T+ +Y G GQLG L N
Sbjct: 281 A-KNLKGRMV-IGVAAGRF---HTVLWTKEA-VYTMGLNG-GQLGYLLDPN 324
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 43/135 (31%), Positives = 59/135 (43%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
V TWG LGHG ++ + P++V N V V + + +S G +Y+ G
Sbjct: 147 VYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGH 206
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LGH D Q L P+LV L + + QI+ HT LTE G
Sbjct: 207 GQGGRLGHG---DEQ-----TCLVPRLVEGLS--SHQCSQIAAAKD-----HTVVLTEDG 251
Query: 350 KLYAFGAGDKGQLGI 364
+Y FG QLGI
Sbjct: 252 CVYTFGLNTFHQLGI 266
Score = 98 (39.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
++ +S GQ+Y G G +G + T LV P+LVE L + Q A T VL+
Sbjct: 192 SVFLSHKGQIYTCGHGQGGRLGHGDEQTCLV--PRLVEGLSSHQCSQIAAAKDHTVVLTE 249
Query: 119 EGRVYTFSWGNDARLG 134
+G VYTF +LG
Sbjct: 250 DGCVYTFGLNTFHQLG 265
Score = 96 (38.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KN-IFVVQAAIGNFFTAVLSREG 120
+D +VY +G + +G Q +K P+LV+ +N +++ Q + F + LS +G
Sbjct: 142 TDLTEVYTWGNNINFTLGHGGQQSK--HHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKG 199
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
++YT G RLGH E + P + G
Sbjct: 200 QIYTCGHGQGGRLGHGDEQTCLVPRLVEG 228
Score = 75 (31.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 238 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G+ G L N E+C + P+ V AL+ DV V+ D T V+E GD+Y + C +
Sbjct: 315 GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLADYQCKK 374
Query: 292 SAS 294
AS
Sbjct: 375 IAS 377
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 98 (39.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 25/105 (23%), Positives = 52/105 (49%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 116
+++++D+ V+ G +S+G+ V ++ + L+ L + VVQ G +
Sbjct: 177 SLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQVVCGQDHSLFR 236
Query: 117 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 159
+++G V+ WG D + LGH+ + P L G + + +VQ+
Sbjct: 237 TKKGAVFACGWGADGQTGLGHYNITS--VPTKLGGDIAGVNIVQV 279
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 35/145 (24%), Positives = 63/145 (43%)
Query: 229 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+G + WG Y L E + +VP+ + + +K A G V++E+G V+
Sbjct: 292 EGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIK--EAACGGTGNIVLTEEGAVFV 349
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVT-SLKQVNERVVQISLTNSIYWNAHTFAL 345
+G G I G+G P+++ SL ++ + + +H AL
Sbjct: 350 WGYG---------IL-GKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAAL 399
Query: 346 TESGKLYAFGAGDKGQLGIELVNNQ 370
T G+L+ +G +G LGI + +Q
Sbjct: 400 TNRGELFVWGKNLRGCLGIGRMEDQ 424
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 108 (43.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V TWG G+ G LGHG+ P V+ L+ + I++ G Y + ++ VYS+G
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNT 586
Query: 292 SASLGH 297
LGH
Sbjct: 587 FGQLGH 592
Score = 70 (29.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 60 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSR 118
+L+++ G+VY SFG + + ++ S P L +L FVV A G+F ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWRSEPAEICPSCPILENALIGQFVVTVASGSFHNGAVTE 108
Query: 119 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL 147
G Y WG ++ G N EP+P+
Sbjct: 109 SGVAYM--WGENSA-GQCAVANQQYVPEPNPV 137
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 89 (36.4 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 34/108 (31%), Positives = 43/108 (39%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG-----HNAIADGQGNRHANVLTPQL 316
DV A +V + T V EDG Y+FG A LG + DGQ NR V P
Sbjct: 368 DVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAE 427
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ ER + N I H L GK++A G LG+
Sbjct: 428 APAFGA--ER----TFVN-IEGVQHVVILGSDGKVFAMGKNTDNALGL 468
Score = 87 (35.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH-A 309
+ P V+ K + +A G+ ++ E G + +FG GE LG ++ +++
Sbjct: 288 QEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMC 347
Query: 310 NVLTPQLVTSLKQVNER----VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
+ L+ L+ ++ VV ++ S +W T E GK YAFG + QLGI+
Sbjct: 348 DESGDHLLVPLRFKHKGKFFDVVAKNVFASGFW---TIVHGEDGKYYAFGLNNYAQLGIK 404
Query: 366 L 366
+
Sbjct: 405 V 405
Score = 80 (33.2 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 61 LISDAGQVYAFGKDSFGE--AEYGVQ---GTKLVTSPQLVESL-KNIFVVQAAIGNFFTA 114
+++ G+VY G + G AE GV+ T + E + K +V A G FTA
Sbjct: 199 VLTSEGEVYMCGINEKGTVPAE-GVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTA 257
Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
L+ +G V +WGN +V+ HPLL ++ PVV
Sbjct: 258 ALTDQGSV--IAWGN-----LRNSNGNVDVHPLLHKMQEAPVV 293
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 111 (44.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G+V + G +G LG HG C VP+ ++ L+ K + +A G + G V+
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ N + + + L S H+ +
Sbjct: 62 QWGTG-LASCGRR-LCPGQTLPLFFTAKEPSRVTGLE--NSKAMCV-LAGS----DHSAS 112
Query: 345 LTESGKLYAFGAGDKGQLGIE 365
LT++G++Y +G+ GQL E
Sbjct: 113 LTDAGEVYVWGSNKHGQLANE 133
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 228 QDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG WG G +G LG E + P ++++ + + GD T +V++ G + S
Sbjct: 469 EDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLS 528
Query: 287 FGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
CG +A H A+ D Q N H+ P+L+ L V RV Q++ H AL
Sbjct: 529 --CGSNA---HLALGQDEQRNYHS----PKLIARLADV--RVEQVAAGLQ-----HVLAL 572
Query: 346 TESGKLYAFGAGDKGQLGI 364
+ G +Y +G G LG+
Sbjct: 573 SREGAVYVWGTSTCGALGL 591
Score = 84 (34.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 37/143 (25%), Positives = 58/143 (40%)
Query: 228 QDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
++G V WG G LG GN ++ + P+ + L+ HV T + D
Sbjct: 574 REGAVYVWGTSTCGALGLGNYQQQQKFPQKI-LLS-----HVKTKPSKIYC-GPDTSAVL 626
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
F GE G N R A + T+ K+V + +T + + + H+ L
Sbjct: 627 FANGELHVCGSNDYNKLGFQRSAKI------TAFKKVQ---LPHKVTQACFSSTHSVFLV 677
Query: 347 ESGKLYAFGAGDKGQLGIELVNN 369
E G +Y G +GQ GI N+
Sbjct: 678 EGGYVYTMGRNAEGQRGIRHCNS 700
Score = 83 (34.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T+L++ AG + + G ++ G + SP+L+ L ++ V Q A G LSR
Sbjct: 517 TILVTQAGSLLSCGSNA--HLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSR 574
Query: 119 EGRVYTFSWG 128
EG VY WG
Sbjct: 575 EGAVYV--WG 582
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 228 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
++G+V + G +G LG HG C VP+ ++ L+ K + +A G + G V+
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 286 SFGCGESASLGHNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
+G G AS G + GQ P VT L+ N + + + L S H+ +
Sbjct: 62 QWGTG-LASCGRR-LCPGQTLPLFFTAKEPSRVTGLE--NSKAMCV-LAGS----DHSAS 112
Query: 345 LTESGKLYAFGAGDKGQLGIE 365
LT++G++Y +G+ GQL E
Sbjct: 113 LTDAGEVYVWGSNKHGQLANE 133
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G V G G G LG G + E V + D A+ ++ G V+++ GD+YSFG
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPD--AVDISAGGMHNLVLTKSGDIYSFG 99
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
C + +LG + DG ++ P L+ + + + IS +S H+ L E
Sbjct: 100 CNDEGALGRDTSEDGSESK------PDLI----DLPGKALCISAGDS-----HSACLLED 144
Query: 349 GKLYAFGA--GDKGQLGIELVNNQ 370
G+++A+G+ G +G+ + N+
Sbjct: 145 GRVFAWGSFRDSHGNMGLTIDGNK 168
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 100 (40.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 38/145 (26%), Positives = 62/145 (42%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--------ALNDVKAIHVATGDYTTFVVS 279
Q G + WG YG LG +++ + P ++ ND + I + G + +
Sbjct: 312 QLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERND-RIIELIAGGARSLART 370
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
E G +Y +G G D + H +LT L++ + +V++ I
Sbjct: 371 EQGFIYIWGARWLLVRG-----DPEFRHHPMLLTENYFPGLRRRGDHLVEL-----IAGP 420
Query: 340 AHTFALTESGKLYAFGAGDKGQLGI 364
HT A TE G +YA+G GQLG+
Sbjct: 421 DHTLARTEQGYIYAWGRNYYGQLGL 445
Score = 61 (26.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 61 LISDAGQVYAFGKDSFGEAEYG-----VQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 113
++++ G +Y +G + GE G Q T+L + P L+E + +VQ + +
Sbjct: 192 ILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLE--RGDRIVQLNFADRYL 249
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
+ +G VY + + RLG E + + P
Sbjct: 250 VARTAQGHVYVWGFNYRGRLGLDDEQDRLHP 280
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 100 (40.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 38/145 (26%), Positives = 62/145 (42%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--------ALNDVKAIHVATGDYTTFVVS 279
Q G + WG YG LG +++ + P ++ ND + I + G + +
Sbjct: 312 QLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERND-RIIELIAGGARSLART 370
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
E G +Y +G G D + H +LT L++ + +V++ I
Sbjct: 371 EQGFIYIWGARWLLVRG-----DPEFRHHPMLLTENYFPGLRRRGDHLVEL-----IAGP 420
Query: 340 AHTFALTESGKLYAFGAGDKGQLGI 364
HT A TE G +YA+G GQLG+
Sbjct: 421 DHTLARTEQGYIYAWGRNYYGQLGL 445
Score = 61 (26.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 61 LISDAGQVYAFGKDSFGEAEYG-----VQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 113
++++ G +Y +G + GE G Q T+L + P L+E + +VQ + +
Sbjct: 192 ILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLE--RGDRIVQLNFADRYL 249
Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
+ +G VY + + RLG E + + P
Sbjct: 250 VARTAQGHVYVWGFNYRGRLGLDDEQDRLHP 280
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
V + ++ + V HVA GD T +++ G + +FG G + LGH ++ D +
Sbjct: 372 VSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLND--------IS 423
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P +V +L + +VQ++ S H AL+ +L+A+G GD G+LG+
Sbjct: 424 QPTIVEAL--LGYEMVQVACGAS-----HVLALSTERELFAWGRGDGGRLGL 468
Score = 86 (35.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 394 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 451
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEP 144
E ++ + G+ RLG T + P
Sbjct: 452 ERELFAWGRGDGGRLGLGTRESHCCP 477
Score = 76 (31.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G P VQ L +K VA GD T + +G+V+S+G G LG
Sbjct: 578 GSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 630
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 118 (46.6 bits), Expect = 0.00063, P = 0.00063
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
V + ++ + V HVA GD T +++ G + +FG G + LGH ++ D +
Sbjct: 376 VSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLND--------IS 427
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P +V +L + +VQ++ S H AL+ +L+A+G GD G+LG+
Sbjct: 428 QPTIVEAL--LGYEMVQVACGAS-----HVLALSTERELFAWGRGDGGRLGL 472
Score = 86 (35.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 59 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 398 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 455
Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEP 144
E ++ + G+ RLG T + P
Sbjct: 456 ERELFAWGRGDGGRLGLGTRESHCCP 481
Score = 76 (31.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G P VQ L +K VA GD T + +G+V+S+G G LG
Sbjct: 582 GSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 634
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 384 334 0.00091 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 194
No. of states in DFA: 604 (64 KB)
Total size of DFA: 223 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.66u 0.13s 23.79t Elapsed: 00:00:01
Total cpu time: 23.74u 0.13s 23.87t Elapsed: 00:00:01
Start: Mon May 20 23:09:38 2013 End: Mon May 20 23:09:39 2013
WARNINGS ISSUED: 1